Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
817,654 |
+G |
coding (377/513 nt) |
moaB → |
molybdopterin biosynthesis protein B |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 817,651 | 1 | . | G | 100.0%
| 609.5
/ NA
| 194 | A125G (GCG→GGG) | moaB | molybdopterin biosynthesis protein B |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (102/92); total (102/92) |
Only 100 of 213 total aligned reads displayed.
GTTCGACCGTGAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGC‑GGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCGCCGCA > NC_000913/817559‑817738
|
cGACCGTGAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGC‑ggg < 2:2047767/93‑1 (MQ=255)
gACCGTGAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGC‑gggg < 1:4832461/93‑2 (MQ=255)
aCCGTGAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGT‑ggcgg > 1:4743968/1‑90 (MQ=255)
aCCGTGAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGC‑ggggc > 1:2747147/1‑91 (MQ=255)
cGTGAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGC‑ggggcgt > 2:4421185/1‑89 (MQ=255)
cGTGAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGC‑ggggcgt < 1:3872207/93‑5 (MQ=255)
gTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGGCGCcaa > 1:3918226/1‑93 (MQ=255)
tGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCcaaca > 1:2474483/1‑93 (MQ=255)
aaGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACaaa > 1:2028186/1‑93 (MQ=255)
ggTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAAc > 1:1495535/1‑93 (MQ=255)
ggTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAAc > 1:6286078/1‑93 (MQ=255)
tttGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCt < 1:8815/93‑1 (MQ=255)
tGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGa > 2:3873494/1‑93 (MQ=255)
ggTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGAt < 1:5497189/93‑1 (MQ=255)
gTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGAtt < 2:1249913/93‑1 (MQ=255)
tGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGAttt < 1:1190017/93‑1 (MQ=255)
ggAAGTGTTCCGGATGTTGTCGTGTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGAttt < 2:4613591/92‑1 (MQ=255)
gAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGAtttt > 2:318543/1‑93 (MQ=255)
gAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGAtttt > 1:4563596/1‑93 (MQ=255)
gaGTGTGCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTc < 2:5684065/92‑1 (MQ=255)
aaGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTc > 2:2481152/1‑93 (MQ=255)
aaGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTc > 2:530595/1‑93 (MQ=255)
aaGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTc < 2:642362/93‑1 (MQ=255)
aGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCg < 1:3305808/93‑1 (MQ=255)
aGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCg > 2:4699890/1‑93 (MQ=255)
aGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCg > 1:1745784/1‑93 (MQ=255)
tgtTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGAATTTCGcc > 1:100756/1‑93 (MQ=255)
gtTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCa < 1:404338/93‑1 (MQ=255)
gtTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCa < 1:2227976/93‑1 (MQ=255)
ttCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCAt < 2:1020371/93‑1 (MQ=255)
ttCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCAt > 2:4908241/1‑93 (MQ=255)
ttCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCAt < 2:2238276/93‑1 (MQ=255)
tCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATg > 2:627360/1‑93 (MQ=255)
ccGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGc < 2:1125548/93‑1 (MQ=255)
ccGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGc > 1:6026390/1‑93 (MQ=255)
ggATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCg < 1:4538872/93‑1 (MQ=255)
gATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCgg > 1:1517975/1‑93 (MQ=255)
gATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCgg < 1:3788830/93‑1 (MQ=255)
gATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCgg > 1:2449555/1‑93 (MQ=255)
gATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCgg > 2:4185160/1‑93 (MQ=255)
gATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCACGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCgg > 1:4435132/1‑93 (MQ=255)
tgttgtCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGGTGATTTTCGCCATGCCGGGt < 1:4064935/93‑1 (MQ=255)
tgttgtCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGt < 2:5090481/93‑1 (MQ=255)
tgttgtCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGt > 1:5006337/1‑93 (MQ=255)
tgttgtCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGt > 1:3410386/1‑93 (MQ=255)
tgttgtCGTTTGAAGAGATTGGCACTCCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGt > 1:655107/1‑93 (MQ=255)
gttgtCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCgggct > 2:1605569/1‑91 (MQ=255)
ttgtCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTc > 1:3161372/1‑93 (MQ=255)
ttgtCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTc > 1:1420085/1‑93 (MQ=255)
ttgtCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTc > 2:356962/1‑93 (MQ=255)
ttgtCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTc > 2:5997188/1‑93 (MQ=255)
ttgtCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTc > 1:3434237/1‑93 (MQ=255)
tCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGAc > 2:4027641/1‑93 (MQ=255)
tCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGAc < 2:532711/93‑1 (MQ=255)
tCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGAc < 2:5563464/93‑1 (MQ=255)
tCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGAc < 2:2507146/93‑1 (MQ=255)
tGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAg < 2:4932201/93‑1 (MQ=255)
tGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAg > 2:2190686/1‑93 (MQ=255)
gagaTTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTg < 2:2723978/93‑1 (MQ=255)
gagaTTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTg > 2:2696628/1‑93 (MQ=255)
gaTTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGcc > 2:6102728/1‑93 (MQ=255)
gaTTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGcc > 1:2838235/1‑93 (MQ=255)
gaTTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGcc < 2:1591411/93‑1 (MQ=255)
gaTTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGcc < 2:679531/93‑1 (MQ=255)
aTTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGCTTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCg > 2:4262013/1‑93 (MQ=255)
ttGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGt < 2:1915793/93‑1 (MQ=255)
ttGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGt > 1:1359494/1‑93 (MQ=255)
tGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTa > 1:2959138/1‑93 (MQ=255)
ggCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTAc < 1:1908255/93‑1 (MQ=255)
ggCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTAc < 2:294493/93‑1 (MQ=255)
gCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTAcc < 2:3859711/93‑1 (MQ=255)
gCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATATTCGCCATGCCGGGTTCGAACAAAGCGTGCCgagcc > 2:3131739/1‑89 (MQ=255)
cACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCg > 1:1534443/1‑93 (MQ=255)
ttCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCAt > 2:5504442/1‑93 (MQ=255)
ttCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCAt < 2:1377741/93‑1 (MQ=255)
ccACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATgg > 2:3727575/1‑93 (MQ=255)
ccACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATgg > 2:3997814/1‑93 (MQ=255)
cACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATggg > 1:3306458/1‑93 (MQ=255)
aCGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGa < 2:5749836/93‑1 (MQ=255)
ttGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGaaaa > 2:922789/1‑93 (MQ=255)
ttGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGaaaa > 2:3711597/1‑93 (MQ=255)
ttGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGaaaa > 2:3334355/1‑93 (MQ=255)
gCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAata < 2:824708/93‑1 (MQ=255)
gCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAata > 1:5146576/1‑93 (MQ=255)
aaTCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATatc < 1:1082801/93‑1 (MQ=255)
aTCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATatca < 2:3832279/93‑1 (MQ=255)
tctcGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATatcat > 1:6080185/1‑93 (MQ=255)
tctcGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATatcat < 1:5793530/93‑1 (MQ=255)
tctcGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATatcat < 1:5034636/93‑1 (MQ=255)
ctcGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATatcatc < 2:2867488/93‑1 (MQ=255)
ctcGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATatcatc < 2:4737491/93‑1 (MQ=255)
tcGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATcg < 1:6226702/93‑1 (MQ=255)
cGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATcgc < 2:5207940/93‑1 (MQ=255)
gTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATcgcg > 1:2934397/1‑93 (MQ=255)
tGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCgcgc > 2:3077651/1‑93 (MQ=255)
tGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCgcgc < 1:4124337/93‑1 (MQ=255)
gCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGcgcc < 2:2456643/93‑1 (MQ=255)
cGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGcgccg < 1:3940231/93‑1 (MQ=255)
ggTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGcgccgc > 1:5572051/1‑93 (MQ=255)
ggTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGcgccgc < 1:2080170/93‑1 (MQ=255)
|
GTTCGACCGTGAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGC‑GGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCGCCGCA > NC_000913/817559‑817738
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GACCGTGAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGC‑GGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCGCCGCAGCTGGATGC > NC_000913/817563‑817747
|
GACCGTGAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTGGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGC‑GGGGG > SRR4302533.3413583/1‑94 (MQ=60)
GACCGTGAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGC‑GGGgc < SRR4302533.4861750/94‑3 (MQ=60)
GACCGTGAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGC‑GGGgc > SRR4302533.2763989/1‑92 (MQ=60)
ACCGTGAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGC‑GGGgcg > SRR4302533.4756849/1‑91 (MQ=60)
ACCGTGAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGC‑GGGgcg > SRR4302533.451640/1‑91 (MQ=60)
CGTGAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTC > SRR4302533.1039842/1‑94 (MQ=60)
CGTGAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTC > SRR4302533.955203/1‑94 (MQ=60)
CGTGAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTC > SRR4302533.84198/1‑94 (MQ=60)
CGTGAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTC > SRR4302533.704322/1‑94 (MQ=60)
CGTGAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTC < SRR4302533.3895841/94‑1 (MQ=60)
GTGAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCG > SRR4302533.3679176/1‑94 (MQ=60)
GAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCC > SRR4302533.4053177/1‑94 (MQ=60)
GAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCC < SRR4302533.6172545/94‑1 (MQ=60)
AGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGGCGCCAA > SRR4302533.3942152/1‑94 (MQ=60)
TTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACA > SRR4302533.2489742/1‑94 (MQ=60)
TTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACA > SRR4302533.6104783/1‑94 (MQ=60)
GAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAA > SRR4302533.2040707/1‑94 (MQ=60)
AAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAA > SRR4302533.776227/1‑94 (MQ=60)
AAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAA < SRR4302533.5946892/94‑1 (MQ=60)
AGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAAC > SRR4302533.1504546/1‑94 (MQ=60)
AGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAAC < SRR4302533.3821284/94‑1 (MQ=60)
AGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAAC > SRR4302533.6323581/1‑94 (MQ=60)
GTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGC > SRR4302533.1540456/1‑94 (MQ=60)
TTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTG < SRR4302533.8893/94‑1 (MQ=60)
TTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTG < SRR4302533.325233/94‑1 (MQ=60)
TGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGAT > SRR4302533.2293178/1‑94 (MQ=60)
GGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATT < SRR4302533.5530345/94‑1 (MQ=60)
GTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTT > SRR4302533.1991615/1‑94 (MQ=60)
TGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTT < SRR4302533.1197163/94‑1 (MQ=60)
TGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTT > SRR4302533.4591268/1‑94 (MQ=60)
TGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTT > SRR4302533.3940924/1‑94 (MQ=60)
GAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTC > SRR4302533.4228341/1‑94 (MQ=60)
AAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCG > SRR4302533.1756403/1‑94 (MQ=60)
AAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCG > SRR4302533.6324272/1‑94 (MQ=60)
AGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGC < SRR4302533.3326222/94‑1 (MQ=60)
GTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGAATTTCGCC > SRR4302533.101383/1‑94 (MQ=60)
GTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCAT < SRR4302533.4932534/94‑1 (MQ=60)
GTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCAT < SRR4302533.2241726/94‑1 (MQ=60)
GTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCAT < SRR4302533.406773/94‑1 (MQ=60)
TTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATG < SRR4302533.3948845/94‑1 (MQ=60)
TCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGC > SRR4302533.6062908/1‑94 (MQ=60)
GGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGG < SRR4302533.4566352/94‑1 (MQ=60)
GGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGG > SRR4302533.2464674/1‑94 (MQ=60)
GGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGG > SRR4302533.1865417/1‑94 (MQ=60)
GGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGG > SRR4302533.1527113/1‑94 (MQ=60)
GGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCACGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGG > SRR4302533.4461941/1‑94 (MQ=60)
GATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGG < SRR4302533.667840/94‑1 (MQ=60)
GATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGG < SRR4302533.3326480/94‑1 (MQ=60)
GATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGG < SRR4302533.5651690/94‑1 (MQ=60)
GATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGG > SRR4302533.2470540/1‑94 (MQ=60)
GATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGG < SRR4302533.3812032/94‑1 (MQ=60)
ATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGT > SRR4302533.1043249/1‑94 (MQ=60)
ATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGT > SRR4302533.5036674/1‑94 (MQ=60)
ATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGT > SRR4302533.3431450/1‑94 (MQ=60)
ATGTTGTCGTTTGAAGAGATTGGCACTCCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGT > SRR4302533.658975/1‑94 (MQ=60)
TGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGGTGATTTTCGCCATGCCGGGTT < SRR4302533.4089679/94‑1 (MQ=60)
GTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTC > SRR4302533.3455451/1‑94 (MQ=60)
GTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTC > SRR4302533.1428676/1‑94 (MQ=60)
GTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTC > SRR4302533.3180825/1‑94 (MQ=60)
TTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCG < SRR4302533.2729531/94‑1 (MQ=60)
CGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCA < SRR4302533.2081074/94‑1 (MQ=60)
GTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAA > SRR4302533.3659111/1‑94 (MQ=60)
GTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAA > SRR4302533.944617/1‑94 (MQ=60)
TTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAG > SRR4302533.5309607/1‑94 (MQ=60)
GAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGC > SRR4302533.4085499/1‑94 (MQ=60)
GAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGC > SRR4302533.2767009/1‑94 (MQ=60)
AGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCC > SRR4302533.2855702/1‑94 (MQ=60)
GATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCG > SRR4302533.5138844/1‑94 (MQ=60)
ATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGT > SRR4302533.1367665/1‑94 (MQ=60)
ATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGT < SRR4302533.4257314/94‑1 (MQ=60)
TTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTA > SRR4302533.2977223/1‑94 (MQ=60)
GGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACC < SRR4302533.1401025/94‑1 (MQ=60)
GGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACC < SRR4302533.1919894/94‑1 (MQ=60)
GCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCG > SRR4302533.1543662/1‑94 (MQ=60)
GCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCG < SRR4302533.1453186/94‑1 (MQ=60)
CTTCCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCAT > SRR4302533.2767135/1‑94 (MQ=60)
CCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGG < SRR4302533.4571605/94‑1 (MQ=60)
CCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGG > SRR4302533.3326875/1‑94 (MQ=60)
CCACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGG > SRR4302533.5060423/1‑94 (MQ=60)
CACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGA < SRR4302533.2220767/94‑1 (MQ=60)
CACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGA < SRR4302533.6302168/94‑1 (MQ=60)
ACGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAA > SRR4302533.1656557/1‑94 (MQ=60)
CGTTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAA > SRR4302533.538465/1‑94 (MQ=60)
TTGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAAT > SRR4302533.1524925/1‑94 (MQ=60)
TGCAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATA > SRR4302533.5177678/1‑94 (MQ=60)
CAATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATC > SRR4302533.1694313/1‑94 (MQ=60)
AATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCA > SRR4302533.4097942/1‑94 (MQ=60)
AATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCA < SRR4302533.1089188/94‑1 (MQ=60)
AATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCA > SRR4302533.3079591/1‑94 (MQ=60)
AATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCA < SRR4302533.554188/94‑1 (MQ=60)
ATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCAT < SRR4302533.4800625/94‑1 (MQ=60)
ATCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCAT > SRR4302533.6116956/1‑94 (MQ=60)
TCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATC < SRR4302533.5828531/94‑1 (MQ=60)
TCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATC < SRR4302533.5065131/94‑1 (MQ=60)
TCTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATC < SRR4302533.1152237/94‑1 (MQ=60)
CTCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTGCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGAAAAATATCATCG < SRR4302533.1261443/94‑1 (MQ=60)
TCGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGC < SRR4302533.6264005/94‑1 (MQ=60)
CGTGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCG > SRR4302533.2952339/1‑94 (MQ=60)
TGCGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCGCC < SRR4302533.4149375/94‑1 (MQ=60)
CGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCGCCGC < SRR4302533.3964275/94‑1 (MQ=60)
CGGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCGCCGC > SRR4302533.5605727/1‑94 (MQ=60)
GGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCGCCGCA < SRR4302533.2092967/94‑1 (MQ=60)
GGTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCGCCGCA > SRR4302533.345334/1‑94 (MQ=60)
GTAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCGCCGCAC > SRR4302533.2487706/1‑94 (MQ=60)
TAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCGCCGCAGC > SRR4302533.529847/1‑94 (MQ=60)
TAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCGCCGCAGC > SRR4302533.5106706/1‑94 (MQ=60)
TAGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCGCCGCAGC > SRR4302533.6047952/1‑94 (MQ=60)
AGCGGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCGCCGCAGCT > SRR4302533.2542670/1‑94 (MQ=60)
cgGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCGCCGCAGCTGG < SRR4302533.2671565/92‑1 (MQ=60)
cgGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCGCCGCAGCTGG > SRR4302533.3017589/3‑94 (MQ=60)
GGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCGCCGCAGCTGGAT < SRR4302533.627558/94‑1 (MQ=60)
GGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCGCCGCAGCTGGAT < SRR4302533.1551911/94‑1 (MQ=60)
GGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCGCCGCAGCTGGAT > SRR4302533.3298425/1‑94 (MQ=60)
GGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCGCCGCAGCTGGAT < SRR4302533.2542981/94‑1 (MQ=60)
GGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCGCCGCAGCTGGATG < SRR4302533.2959485/94‑1 (MQ=60)
GCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCGCCGCAGCTGGATGC < SRR4302533.5945181/94‑1 (MQ=60)
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GACCGTGAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGC‑GGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCGCCGCAGCTGGATGC > NC_000913/817563‑817747
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
