Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,078,857 |
T→C |
Y143C (TAC→TGC) |
sbmC ← |
SbmC |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,078,857 | 0 | T | C | 100.0%
| 666.2
/ NA
| 207 | Y143C (TAC→TGC) | sbmC | SbmC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (105/102); total (105/102) |
Only 100 of 208 total aligned reads displayed.
AAAAAAAGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGTACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTAAAG > NC_000913/2078767‑2078946
|
aaaaaaGAGCGGTCATCCCGTTAACACCCCGCCCTGAGATGAATTAGTGATGTTTTGGCGGCACCGCAACATACATTTCGATATCCCAGCAcc < 1:4914559/93‑1 (MQ=255)
agagTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCt < 2:4428831/93‑1 (MQ=255)
agagTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCt < 2:1598575/93‑1 (MQ=255)
agagTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCt > 1:927733/1‑93 (MQ=255)
agTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTc < 2:1229517/93‑1 (MQ=255)
gTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTcc < 1:75013/93‑1 (MQ=255)
gTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTcc > 2:5310833/1‑93 (MQ=255)
tGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCcg > 2:5076507/1‑93 (MQ=255)
ggTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCcgc < 1:1359490/93‑1 (MQ=255)
ggTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCcgc < 2:5095813/93‑1 (MQ=255)
gTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCcgcg > 2:580236/1‑93 (MQ=255)
tCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCgcgc > 2:3508391/1‑93 (MQ=255)
aTCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCa > 2:2540574/1‑93 (MQ=255)
aTCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCa > 2:2474649/1‑93 (MQ=255)
aTCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCa > 2:5961247/1‑93 (MQ=255)
aTCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCa > 2:5955990/1‑93 (MQ=255)
tCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCAt < 2:419356/93‑1 (MQ=255)
tCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCAt > 2:2111321/1‑93 (MQ=255)
cgcgTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCAtt < 2:4288626/93‑1 (MQ=255)
gcgTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTg > 1:397249/1‑93 (MQ=255)
gcgTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTg < 2:4352108/93‑1 (MQ=255)
gcgTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTg > 1:458599/1‑93 (MQ=255)
cgTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGt < 1:380859/93‑1 (MQ=255)
cgTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGt > 2:5735148/1‑93 (MQ=255)
gTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGGACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGtt > 1:4439751/1‑93 (MQ=255)
gTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGtt > 2:4603193/1‑93 (MQ=255)
gTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGtt > 2:4039350/1‑93 (MQ=255)
ttAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTc > 2:3730565/1‑93 (MQ=255)
ttAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTc > 2:2684163/1‑93 (MQ=255)
ttAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTc > 1:1204001/1‑93 (MQ=255)
aaCACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCaa < 2:1159738/93‑1 (MQ=255)
acacacCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCaaa < 2:3099596/93‑1 (MQ=255)
cacacCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAAt < 1:14967/93‑1 (MQ=255)
cacacCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAAt < 1:5004120/93‑1 (MQ=255)
cacCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATaa < 1:430897/93‑1 (MQ=255)
acCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATaaa > 1:347101/1‑93 (MQ=255)
cGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAAcc < 1:1083828/93‑1 (MQ=255)
gCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATGCATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCt < 1:6188096/93‑1 (MQ=255)
cccTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTc < 1:6037819/93‑1 (MQ=255)
ccTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCg > 1:2169086/1‑93 (MQ=255)
cTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGa > 1:5377396/1‑93 (MQ=255)
cTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGa < 1:2448147/93‑1 (MQ=255)
tGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGaa > 2:714829/1‑93 (MQ=255)
tGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGaa > 2:1676272/1‑93 (MQ=255)
gagaTGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAg < 1:2210212/93‑1 (MQ=255)
agaTGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGc > 2:5590953/1‑93 (MQ=255)
agaTGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGc < 1:321105/93‑1 (MQ=255)
gaTGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCa < 1:3444550/93‑1 (MQ=255)
gaTGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCa < 2:5906784/93‑1 (MQ=255)
gaTGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCa > 1:878930/1‑93 (MQ=255)
tGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAgg < 1:1596134/93‑1 (MQ=255)
tGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAgg < 1:1757476/93‑1 (MQ=255)
tGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAgg < 1:5581876/93‑1 (MQ=255)
aaTTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGc > 2:3319161/1‑93 (MQ=255)
aaTTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGc > 2:4135894/1‑93 (MQ=255)
aaTTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGc < 2:6286507/93‑1 (MQ=255)
aaTTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGc < 1:5927118/93‑1 (MQ=255)
aTTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCt > 2:4894554/1‑93 (MQ=255)
ttAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCtt < 2:2767559/93‑1 (MQ=255)
ttAGTGATGTTTTGACTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCtt < 2:777079/93‑1 (MQ=255)
aGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTg < 2:826533/93‑1 (MQ=255)
tGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGt < 1:5193309/93‑1 (MQ=255)
tGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGt > 2:1061389/1‑93 (MQ=255)
tGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGt > 2:4658823/1‑93 (MQ=255)
aTGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTaa > 1:1828479/1‑93 (MQ=255)
tGTTTTGTCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAAc < 1:59114/93‑1 (MQ=255)
ttttGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACAt > 2:5324146/1‑93 (MQ=255)
tGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTc > 2:231507/1‑93 (MQ=255)
ggCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCa < 1:2690187/93‑1 (MQ=255)
cTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATa > 2:1332925/1‑93 (MQ=255)
cTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATa < 2:3949667/93‑1 (MQ=255)
cTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATa > 1:3019778/1‑93 (MQ=255)
cTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATa < 2:220591/93‑1 (MQ=255)
tGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATaa > 1:4101330/1‑93 (MQ=255)
tGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATaa < 1:3330465/93‑1 (MQ=255)
tGCACCGCAACATACATTTCGATATACCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATaa > 2:361191/1‑93 (MQ=255)
aCCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCa > 1:4762912/1‑93 (MQ=255)
aCCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCa > 1:3787352/1‑93 (MQ=255)
cGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACt < 1:1193790/93‑1 (MQ=255)
cGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACt < 2:1970968/93‑1 (MQ=255)
acatacatTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTcc > 2:3794174/1‑93 (MQ=255)
atacatTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTg > 1:4196832/1‑93 (MQ=255)
atacatTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTg > 1:3898346/1‑93 (MQ=255)
atacatTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTg > 2:1722657/1‑93 (MQ=255)
atacatTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTg > 1:3074412/1‑93 (MQ=255)
tacatTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGc < 2:2442689/93‑1 (MQ=255)
acatTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCa > 1:1553223/1‑93 (MQ=255)
catTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCaa > 1:5256894/1‑93 (MQ=255)
catTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCaa > 2:2866802/1‑93 (MQ=255)
tttCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAaga < 1:5830646/93‑1 (MQ=255)
tttCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAaga < 2:4478986/93‑1 (MQ=255)
tttCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAaga < 2:6148967/93‑1 (MQ=255)
tCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAgaga < 2:4832094/93‑1 (MQ=255)
cGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGAc < 1:3281206/93‑1 (MQ=255)
gATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCCAGAGACt < 2:5986804/93‑1 (MQ=255)
gATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACt < 1:5690499/93‑1 (MQ=255)
atCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTAtt < 2:3688593/93‑1 (MQ=255)
tCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTa > 1:5881431/1‑93 (MQ=255)
cAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTAAAg > 1:3029879/1‑93 (MQ=255)
cAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTAAAg < 2:3187599/93‑1 (MQ=255)
|
AAAAAAAGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGTACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTAAAG > NC_000913/2078767‑2078946
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCAAAAAAAAGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGTACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTAAAGAACT > NC_000913/2078764‑2078950
|
TCAAAAAAAAGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGC > SRR4302533.3271784/1‑94 (MQ=60)
CAAAAAAAAGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCA > SRR4302533.1724054/1‑94 (MQ=60)
AAAAAAAGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACC < SRR4302533.5224789/94‑1 (MQ=60)
AAAAAAGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCC < SRR4302533.3825062/94‑1 (MQ=60)
AAAAAAGAGCGGTCATCCCGTTAACACCCCGCCCTGAGATGAATTAGTGATGTTTTGGCGGCACCGCAACATACATTTCGATATCCCAGCACCC < SRR4302533.4944328/94‑1 (MQ=60)
AAGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCT > SRR4302533.933179/1‑94 (MQ=60)
AGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTT < SRR4302533.1201601/94‑1 (MQ=60)
AGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTT < SRR4302533.5180508/94‑1 (MQ=60)
GAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTC < SRR4302533.1575465/94‑1 (MQ=60)
AGTGGTCATCGCGTTAACACACCGTCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCC < SRR4302533.6006505/94‑1 (MQ=60)
AGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCC < SRR4302533.1095317/94‑1 (MQ=60)
GTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCG < SRR4302533.75500/94‑1 (MQ=60)
GTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCG < SRR4302533.5951860/94‑1 (MQ=60)
TGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGC < SRR4302533.1802642/94‑1 (MQ=60)
GGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCG < SRR4302533.1367661/94‑1 (MQ=60)
TCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCC > SRR4302533.6161211/1‑94 (MQ=60)
CGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTG > SRR4302533.461340/1‑94 (MQ=60)
CGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTG < SRR4302533.1644875/94‑1 (MQ=60)
CGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTG > SRR4302533.399650/1‑94 (MQ=60)
GCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGT > SRR4302533.580768/1‑94 (MQ=60)
GCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGT > SRR4302533.3259894/1‑94 (MQ=60)
GCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGT < SRR4302533.3471832/94‑1 (MQ=60)
CGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGGACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTT > SRR4302533.4466587/1‑94 (MQ=60)
CGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTT < SRR4302533.383154/94‑1 (MQ=60)
GTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTC > SRR4302533.1211238/1‑94 (MQ=60)
TAACACTCCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAA < SRR4302533.4069832/94‑1 (MQ=60)
ACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAAT > SRR4302533.689058/1‑94 (MQ=60)
CACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATA < SRR4302533.893711/94‑1 (MQ=60)
CACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATA < SRR4302533.15073/94‑1 (MQ=60)
CACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATA < SRR4302533.5034447/94‑1 (MQ=60)
ACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAA < SRR4302533.4606863/94‑1 (MQ=60)
CACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAA > SRR4302533.349220/1‑94 (MQ=60)
CACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAA < SRR4302533.433466/94‑1 (MQ=60)
CGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCT < SRR4302533.1090220/94‑1 (MQ=60)
GCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATGCATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTC < SRR4302533.6225235/94‑1 (MQ=60)
GCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTC < SRR4302533.4235843/94‑1 (MQ=60)
GCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTC < SRR4302533.5347939/94‑1 (MQ=60)
GCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTC < SRR4302533.2356938/94‑1 (MQ=60)
CCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCG < SRR4302533.6074407/94‑1 (MQ=60)
CCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCG > SRR4302533.2182428/1‑94 (MQ=60)
CCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGA > SRR4302533.5409712/1‑94 (MQ=60)
CTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAA < SRR4302533.988243/94‑1 (MQ=60)
CTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAA < SRR4302533.2463255/94‑1 (MQ=60)
GAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGC < SRR4302533.2223843/94‑1 (MQ=60)
AGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCA > SRR4302533.884089/1‑94 (MQ=60)
AGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCA > SRR4302533.592216/1‑94 (MQ=60)
AGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCA < SRR4302533.323068/94‑1 (MQ=60)
GATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAG < SRR4302533.3465822/94‑1 (MQ=60)
ATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGG < SRR4302533.3349929/94‑1 (MQ=60)
TGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGG < SRR4302533.1605794/94‑1 (MQ=60)
TGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGG < SRR4302533.1768189/94‑1 (MQ=60)
TGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGG < SRR4302533.5615603/94‑1 (MQ=60)
TGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGG < SRR4302533.5712513/94‑1 (MQ=60)
TGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGG > SRR4302533.2222812/1‑94 (MQ=60)
AATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCT < SRR4302533.5962949/94‑1 (MQ=60)
AATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCT > SRR4302533.2976778/1‑94 (MQ=60)
ATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTT > SRR4302533.3053150/1‑94 (MQ=60)
TTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTT < SRR4302533.1317608/94‑1 (MQ=60)
TAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTG < SRR4302533.4410160/94‑1 (MQ=60)
AGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGG < SRR4302533.5838217/94‑1 (MQ=60)
TGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTA < SRR4302533.5224634/94‑1 (MQ=60)
GATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAA > SRR4302533.1839645/1‑94 (MQ=60)
TGTTTTGTCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACA < SRR4302533.59503/94‑1 (MQ=60)
GTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACAT > SRR4302533.794490/1‑94 (MQ=60)
GGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCAT < SRR4302533.2706680/94‑1 (MQ=60)
GCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATA > SRR4302533.3038264/1‑94 (MQ=60)
CTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAA > SRR4302533.4126288/1‑94 (MQ=60)
CTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAA < SRR4302533.3139089/94‑1 (MQ=60)
TGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAG < SRR4302533.3351052/94‑1 (MQ=60)
TGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAG < SRR4302533.4117261/94‑1 (MQ=60)
CACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCA > SRR4302533.3810542/1‑94 (MQ=60)
CACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCA > SRR4302533.4791798/1‑94 (MQ=60)
CGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCACATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTG < SRR4302533.3413730/94‑1 (MQ=60)
CGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTG < SRR4302533.1200965/94‑1 (MQ=60)
CGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTG < SRR4302533.5908860/94‑1 (MQ=60)
GCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGT > SRR4302533.2910511/1‑94 (MQ=60)
ACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCT > SRR4302533.398352/1‑94 (MQ=60)
ACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCT < SRR4302533.2465223/94‑1 (MQ=60)
CATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTG > SRR4302533.3093284/1‑94 (MQ=60)
CATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTG > SRR4302533.4222239/1‑94 (MQ=60)
CATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTG > SRR4302533.3922129/1‑94 (MQ=60)
ATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGC > SRR4302533.500117/1‑94 (MQ=60)
ATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGC < SRR4302533.5537874/94‑1 (MQ=60)
TACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCA > SRR4302533.1562577/1‑94 (MQ=60)
ACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAA > SRR4302533.4640123/1‑94 (MQ=60)
ACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAA > SRR4302533.5288465/1‑94 (MQ=60)
CATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAG < SRR4302533.3906624/94‑1 (MQ=60)
CATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAG < SRR4302533.3713933/94‑1 (MQ=60)
ATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGA > SRR4302533.1407694/1‑94 (MQ=60)
TTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAG > SRR4302533.1520749/1‑94 (MQ=60)
TTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAG < SRR4302533.5865880/94‑1 (MQ=60)
TTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAG < SRR4302533.1981713/94‑1 (MQ=60)
CGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACT < SRR4302533.3301462/94‑1 (MQ=60)
GATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTA > SRR4302533.4130377/1‑94 (MQ=60)
GATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTA < SRR4302533.5724866/94‑1 (MQ=60)
GATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTA > SRR4302533.4918797/1‑94 (MQ=60)
ATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTA > SRR4302533.5916974/1‑94 (MQ=60)
CCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTAAAG > SRR4302533.3048421/1‑94 (MQ=60)
CCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTAAAG > SRR4302533.3048420/1‑94 (MQ=60)
CAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTAAAGA > SRR4302533.5091110/1‑94 (MQ=60)
AGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTAAAGAA < SRR4302533.489939/94‑1 (MQ=60)
GCACCCATCTTCCGCGCCATTGTTCAAATAAGCCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTAAAGAAC < SRR4302533.2586116/94‑1 (MQ=60)
CACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTAAAGAACT < SRR4302533.1059445/94‑1 (MQ=60)
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TCAAAAAAAAGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGTACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTAAAGAACT > NC_000913/2078764‑2078950
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
