Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,151,093 |
A→G |
C20R (TGC→CGC) |
b2073 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,151,093 | 0 | A | G | 100.0%
| 666.9
/ NA
| 207 | C20R (TGC→CGC) | b2073 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (105/102); total (105/102) |
Only 100 of 213 total aligned reads displayed.
CATCACGAAAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCAACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTATCGAGGT > NC_000913/2151003‑2151181
|
atcaCGAAAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACg > 1:1753682/1‑93 (MQ=255)
tcaCGAAAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGt > 2:2987570/1‑93 (MQ=255)
tcaCGAAAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGt < 2:3347197/93‑1 (MQ=255)
caCGAAAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTg < 1:5507535/93‑1 (MQ=255)
caCGAAAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTg < 2:4317228/93‑1 (MQ=255)
cGAAAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGt < 2:2412531/93‑1 (MQ=255)
gAAAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGtt > 2:1390876/1‑93 (MQ=255)
gAAAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGtt < 1:2809989/93‑1 (MQ=255)
aaaGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTc > 1:5965635/1‑93 (MQ=255)
aaGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTcc < 2:5298607/93‑1 (MQ=255)
aGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCg < 2:5059099/93‑1 (MQ=255)
aGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCg > 2:3127989/1‑93 (MQ=255)
aGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCg > 1:4189627/1‑93 (MQ=255)
aGGCAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCg > 1:4657467/1‑93 (MQ=255)
tAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGt < 1:102268/93‑1 (MQ=255)
aaCCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGtt < 2:3883929/93‑1 (MQ=255)
aCCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTa < 2:23861/93‑1 (MQ=255)
aCCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTa < 2:2805697/93‑1 (MQ=255)
aTCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTgg > 1:5919431/1‑93 (MQ=255)
tCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGc > 1:3174055/1‑93 (MQ=255)
tCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGc > 2:6225138/1‑93 (MQ=255)
tCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGGTCCGGGTTACTCGc > 2:3751381/1‑93 (MQ=255)
ggCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCaaa > 1:4799864/1‑93 (MQ=255)
gTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATc > 1:5608444/1‑93 (MQ=255)
ttAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCg > 1:379987/1‑93 (MQ=255)
aaGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCACAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCt < 1:3384030/93‑1 (MQ=255)
aaGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCt > 2:1125791/1‑93 (MQ=255)
aaGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCt < 1:6031334/93‑1 (MQ=255)
aaGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCt > 1:464542/1‑93 (MQ=255)
aGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCtg < 2:3542317/93‑1 (MQ=255)
aGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCtg < 1:742565/93‑1 (MQ=255)
gTTCATTAATAGGTCTCCCGTTCATAGAACCAGAAACAGCCAGCAGCAAAATGCAGGGGCGACGTGCTTCCGGGTTACTGGCAAAATCGCtgg < 2:2570417/93‑1 (MQ=255)
gTTCATTAATAGGTCTACCGTTCATCGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCtgg < 1:6089709/93‑1 (MQ=255)
gTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCtgg < 2:2997378/93‑1 (MQ=255)
ttCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCtggt > 1:5205095/1‑93 (MQ=255)
ttCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCtggg > 2:3361061/1‑92 (MQ=255)
tCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCtggtg > 2:3619539/1‑93 (MQ=255)
aTTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGc > 1:4627587/1‑93 (MQ=255)
aTTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGc > 2:4467036/1‑93 (MQ=255)
ttAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCa < 2:2902534/93‑1 (MQ=255)
ttAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCa > 2:782609/1‑93 (MQ=255)
ttAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCa > 1:5900363/1‑93 (MQ=255)
aTAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAAc > 2:2881462/1‑93 (MQ=255)
tAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACg < 1:2409490/93‑1 (MQ=255)
tAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACg > 2:191643/1‑93 (MQ=255)
tCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGAt > 1:5769124/1‑93 (MQ=255)
tCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGAt < 1:2672796/93‑1 (MQ=255)
tCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGAt > 1:3079171/1‑93 (MQ=255)
tCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGAt > 1:327044/1‑93 (MQ=255)
tCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGAt < 1:799119/93‑1 (MQ=255)
tACCGTTCCTAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGAttt > 2:6128289/1‑93 (MQ=255)
tACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGAttt > 1:5870684/1‑93 (MQ=255)
tACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGAttt > 2:596533/1‑93 (MQ=255)
cGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGtt > 2:425629/1‑93 (MQ=255)
gTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTc > 1:4997989/1‑93 (MQ=255)
gTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTc < 2:4028718/93‑1 (MQ=255)
ttCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCg > 2:5600323/1‑93 (MQ=255)
ttCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCg > 1:6217098/1‑93 (MQ=255)
tCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGc < 1:2594373/93‑1 (MQ=255)
cATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCt > 2:4650848/1‑93 (MQ=255)
aTAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTc > 1:2135933/1‑93 (MQ=255)
aTAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTc > 1:3514670/1‑93 (MQ=255)
tAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCa < 1:6307706/93‑1 (MQ=255)
gAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATa > 2:2290173/1‑93 (MQ=255)
gAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATa > 1:2034255/1‑93 (MQ=255)
aaCCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATaa < 1:2638884/93‑1 (MQ=255)
aCCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAg < 2:4149919/93‑1 (MQ=255)
ccAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGa > 2:2205501/1‑93 (MQ=255)
cAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGaa > 1:1435588/1‑93 (MQ=255)
aGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGaaa > 2:4112411/1‑93 (MQ=255)
gAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAAt > 2:3210935/1‑93 (MQ=255)
gAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAAt > 1:3912893/1‑93 (MQ=255)
aaCATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATcc > 2:4683763/1‑93 (MQ=255)
aCATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCt < 1:414317/93‑1 (MQ=255)
aCATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCt > 2:6223751/1‑93 (MQ=255)
aTCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCttt < 2:4116606/93‑1 (MQ=255)
aTCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCttt < 2:472909/93‑1 (MQ=255)
aTCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCttt < 2:3447604/93‑1 (MQ=255)
tCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTc < 1:3658855/93‑1 (MQ=255)
tCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTc < 1:6073144/93‑1 (MQ=255)
cagcaAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTaga < 2:5765443/93‑1 (MQ=255)
agcaAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTagag < 2:2093071/93‑1 (MQ=255)
agcaAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTagag > 1:4308287/1‑93 (MQ=255)
gcaAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAgaga > 1:2286827/1‑93 (MQ=255)
aaaaTGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAAt < 1:3783769/93‑1 (MQ=255)
aaaTGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAAtt < 2:76795/93‑1 (MQ=255)
aaaTGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAAtt > 2:1689660/1‑93 (MQ=255)
aaaTGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAAtt < 1:1611335/93‑1 (MQ=255)
aaTGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCACACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTa < 1:1288562/93‑1 (MQ=255)
aaTGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTa < 2:1612009/93‑1 (MQ=255)
aaTGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTa > 2:5660622/1‑93 (MQ=255)
aTGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTAt < 2:1108883/93‑1 (MQ=255)
aTGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTAt < 1:2537836/93‑1 (MQ=255)
tGCGGGGGCGACGTGTTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTAATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTATc < 1:3754787/93‑1 (MQ=255)
tGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTATc > 1:3559815/1‑93 (MQ=255)
gCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTATCg < 1:288262/93‑1 (MQ=255)
cAGGGGCGACGTGGTTCGGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTATCGa < 1:331193/93‑1 (MQ=255)
cggggCGACGTGGTTCCGGGTTACTGGCAAACACGCTGGTGGCAACCGTGATTAGTTCACTCATAAGAACTCCTTTCTTAGAGATTTATCGAg < 1:6305439/92‑1 (MQ=255)
ggggCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTATCGAgg > 1:1151581/1‑93 (MQ=255)
gggCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTATCGAGGt > 2:2143749/1‑93 (MQ=255)
|
CATCACGAAAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCAACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTATCGAGGT > NC_000913/2151003‑2151181
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTTCATCACGAAAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCAACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTATCGAGGTCCGGT > NC_000913/2151000‑2151186
|
GTTCATCACGAAAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCG > SRR4302533.1215275/1‑94 (MQ=60)
TCATCACGAAAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGAC > SRR4302533.3843703/1‑94 (MQ=60)
CATCACGAAAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACG > SRR4302533.1764366/1‑94 (MQ=60)
CACGAAAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGG > SRR4302533.6032040/1‑94 (MQ=60)
CACGAAAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGG < SRR4302533.5540774/94‑1 (MQ=60)
ACGAAAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGACCCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGT < SRR4302533.1437614/94‑1 (MQ=60)
ACGAAAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACAGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGT < SRR4302533.5899378/94‑1 (MQ=60)
CGAAAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTT < SRR4302533.3809098/94‑1 (MQ=60)
CGAAAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTT > SRR4302533.4295351/1‑94 (MQ=60)
GAAAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTC < SRR4302533.2827280/94‑1 (MQ=60)
GAAAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTC > SRR4302533.6001735/1‑94 (MQ=60)
GAAAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTC > SRR4302533.46622/1‑94 (MQ=60)
AAAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCC < SRR4302533.23911/94‑1 (MQ=60)
AAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCG > SRR4302533.4214990/1‑94 (MQ=60)
AAGGCAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCG > SRR4302533.4685690/1‑94 (MQ=60)
GTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGT < SRR4302533.59904/94‑1 (MQ=60)
GTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGT < SRR4302533.6343756/94‑1 (MQ=60)
TAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTT > SRR4302533.965551/1‑94 (MQ=60)
TAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTT < SRR4302533.2755321/94‑1 (MQ=60)
TAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTT > SRR4302533.764366/1‑94 (MQ=60)
TAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTT < SRR4302533.102906/94‑1 (MQ=60)
AACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTA > SRR4302533.4683920/1‑94 (MQ=60)
CAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTG < SRR4302533.5916869/94‑1 (MQ=60)
AATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGG < SRR4302533.3321056/94‑1 (MQ=60)
AATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGG > SRR4302533.5955212/1‑94 (MQ=60)
ATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGC > SRR4302533.3193589/1‑94 (MQ=60)
ATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGC < SRR4302533.3365584/94‑1 (MQ=60)
CGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAA > SRR4302533.4828938/1‑94 (MQ=60)
CGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGGTACTGGCAAA > SRR4302533.3745032/1‑94 (MQ=60)
GCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAAT < SRR4302533.5717654/94‑1 (MQ=60)
CGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATC > SRR4302533.2545517/1‑94 (MQ=60)
CGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATC > SRR4302533.4902337/1‑94 (MQ=60)
CGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATC > SRR4302533.5642335/1‑94 (MQ=60)
GTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCG > SRR4302533.2586174/1‑94 (MQ=60)
GTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCG > SRR4302533.382276/1‑94 (MQ=60)
TAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCT < SRR4302533.3279150/94‑1 (MQ=60)
TAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCT > SRR4302533.467316/1‑94 (MQ=60)
TAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCT > SRR4302533.6114672/1‑94 (MQ=60)
AAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCACAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTG < SRR4302533.3404924/94‑1 (MQ=60)
AAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTG < SRR4302533.1718783/94‑1 (MQ=60)
AAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTG < SRR4302533.6067888/94‑1 (MQ=60)
AGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGG > SRR4302533.2623162/1‑94 (MQ=60)
AGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGG < SRR4302533.746935/94‑1 (MQ=60)
GTTCATTAATAGGTCTACCGTTCATCGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGT < SRR4302533.6126518/94‑1 (MQ=60)
GTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGT < SRR4302533.1544298/94‑1 (MQ=60)
GTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGT > SRR4302533.5236460/1‑94 (MQ=60)
TTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTG < SRR4302533.727571/94‑1 (MQ=60)
TTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTG > SRR4302533.2219494/1‑94 (MQ=60)
CATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGC > SRR4302533.1221767/1‑94 (MQ=60)
CATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGC > SRR4302533.4655634/1‑94 (MQ=60)
CATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGC > SRR4302533.4185284/1‑94 (MQ=60)
CATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTCGCAAAATCGCTGGTGGC > SRR4302533.2687686/1‑94 (MQ=60)
ATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCA > SRR4302533.5935995/1‑94 (MQ=60)
TAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAA > SRR4302533.4449856/1‑94 (MQ=60)
AATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAAC < SRR4302533.6175074/94‑1 (MQ=60)
TAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGT < SRR4302533.2424372/94‑1 (MQ=60)
GGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGCCGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGA < SRR4302533.3407236/94‑1 (MQ=60)
GTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGAT > SRR4302533.329034/1‑94 (MQ=60)
GTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGAT > SRR4302533.5803953/1‑94 (MQ=60)
GTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGAT > SRR4302533.3098066/1‑94 (MQ=60)
TCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATT < SRR4302533.803822/94‑1 (MQ=60)
TCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATT < SRR4302533.5304433/94‑1 (MQ=60)
TCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATT < SRR4302533.2689192/94‑1 (MQ=60)
CTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTT < SRR4302533.108027/94‑1 (MQ=60)
CTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTT > SRR4302533.614793/1‑94 (MQ=60)
CTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTT < SRR4302533.2931624/94‑1 (MQ=60)
CTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTT > SRR4302533.5906167/1‑94 (MQ=60)
TACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTG > SRR4302533.202151/1‑94 (MQ=60)
CCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTT > SRR4302533.5941244/1‑94 (MQ=60)
CCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTT < SRR4302533.5642991/94‑1 (MQ=60)
CGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTC < SRR4302533.3149141/94‑1 (MQ=60)
CGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTC > SRR4302533.2840755/1‑94 (MQ=60)
CGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTC > SRR4302533.5028288/1‑94 (MQ=60)
CGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTC < SRR4302533.5116200/94‑1 (MQ=60)
GTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCG > SRR4302533.6254377/1‑94 (MQ=60)
CTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCG < SRR4302533.3760887/94‑1 (MQ=60)
TTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGC > SRR4302533.2114149/1‑94 (MQ=60)
TCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCT < SRR4302533.2610317/94‑1 (MQ=60)
CATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTC > SRR4302533.2149103/1‑94 (MQ=60)
CATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTC > SRR4302533.3536335/1‑94 (MQ=60)
ATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCA < SRR4302533.4632800/94‑1 (MQ=60)
TAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCAT < SRR4302533.6345531/94‑1 (MQ=60)
TAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCAT > SRR4302533.2210326/1‑94 (MQ=60)
AGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATA > SRR4302533.2046804/1‑94 (MQ=60)
GAACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAA < SRR4302533.6265438/94‑1 (MQ=60)
AACCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAG < SRR4302533.2655105/94‑1 (MQ=60)
CCAGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAA > SRR4302533.1444255/1‑94 (MQ=60)
AGAAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAAT > SRR4302533.3936789/1‑94 (MQ=60)
AAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCC < SRR4302533.5566553/94‑1 (MQ=60)
AAACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCC > SRR4302533.37930/1‑94 (MQ=60)
ACATCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTT < SRR4302533.416804/94‑1 (MQ=60)
TCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCT < SRR4302533.3681351/94‑1 (MQ=60)
TCCAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCT < SRR4302533.6109884/94‑1 (MQ=60)
CAGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTA > SRR4302533.3576056/1‑94 (MQ=60)
AGCAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAG < SRR4302533.4770152/94‑1 (MQ=60)
CAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAG > SRR4302533.4334217/1‑94 (MQ=60)
CAGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAG > SRR4302533.6096151/1‑94 (MQ=60)
AGCAAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGA > SRR4302533.2300981/1‑94 (MQ=60)
AAAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATT < SRR4302533.3806938/94‑1 (MQ=60)
AAATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTA < SRR4302533.1621105/94‑1 (MQ=60)
AATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCACACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTAT < SRR4302533.1296317/94‑1 (MQ=60)
AATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTAT < SRR4302533.2941490/94‑1 (MQ=60)
ATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTATC > SRR4302533.3581749/1‑94 (MQ=60)
ATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTATC < SRR4302533.3965813/94‑1 (MQ=60)
ATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTATC > SRR4302533.3581748/1‑94 (MQ=60)
ATGCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTATC < SRR4302533.2553461/94‑1 (MQ=60)
TGCGGGGGCGACGTGTTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTAATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTATCG < SRR4302533.3777801/94‑1 (MQ=60)
GCAGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTATCGA < SRR4302533.290023/94‑1 (MQ=60)
CAGGGGCGACGTGGTTCGGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTATCGAG < SRR4302533.333221/94‑1 (MQ=60)
CGGGGCGACGTGGTTCCGGGTTACTGGCAAACACGCTGGTGGCAACCGTGATTAGTTCACTCATAAGAACTCCTTTCTTAGAGATTTATCGAGG < SRR4302533.6343172/94‑1 (MQ=60)
AGGGGCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTATCGAGG > SRR4302533.1158478/1‑94 (MQ=60)
GCGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTATCGAGGTCCG < SRR4302533.1001182/94‑1 (MQ=60)
CGACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTTATAAGAAATCCTTTCTTAGAGAATTATCGAGGTCCGG > SRR4302533.3799350/1‑94 (MQ=60)
GACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTATCGAGGTCCGGT < SRR4302533.964860/94‑1 (MQ=60)
GACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTATCGAGGTCCGGT > SRR4302533.6068944/1‑94 (MQ=60)
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GTTCATCACGAAAGGTAACCAATCCGGCGTTAAGTTCATTAATAGGTCTACCGTTCATAGAACCAGAAACATCCAGCAGCAAAATGCAGGGGCAACGTGGTTCCGGGTTACTGGCAAAATCGCTGGTGGCAAACGTGATTTGTTCGCTCATAAGAAATCCTTTCTTAGAGAATTATCGAGGTCCGGT > NC_000913/2151000‑2151186
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
