Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,157,627 |
T→C |
L407P (CTG→CCG) |
yegO → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,157,627 | 0 | T | C | 100.0%
| 635.8
/ NA
| 198 | L407P (CTG→CCG) | yegO | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (95/103); total (95/103) |
Only 100 of 204 total aligned reads displayed.
GTACCTGTGCGGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCTGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACGGTGCTGT > NC_000913/2157538‑2157716
|
tACCTGTGCGGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGaa < 1:5876995/93‑1 (MQ=255)
aCCTGTGCGGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGaaa > 1:4694251/1‑93 (MQ=255)
ccTGTGCGGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCGCCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGaaaa < 2:1687530/93‑1 (MQ=255)
ccTGTGCGGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGaaaa > 1:5951344/1‑93 (MQ=255)
cTGTGCGGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAAc > 1:3058618/1‑93 (MQ=255)
tgtgCGGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACa < 2:5754139/93‑1 (MQ=255)
tgCGGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACAtt < 2:4956261/93‑1 (MQ=255)
cGGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGc < 2:646048/93‑1 (MQ=255)
ggATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCa > 1:2299372/1‑93 (MQ=255)
gATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCag > 2:2101966/1‑92 (MQ=255)
gATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCAc < 2:6202092/93‑1 (MQ=255)
gATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCAc < 2:1801124/93‑1 (MQ=255)
ttCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGt < 2:1413564/93‑1 (MQ=255)
tCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTc < 2:1785304/93‑1 (MQ=255)
tCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTc < 1:5635332/93‑1 (MQ=255)
tCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTc > 2:183100/1‑93 (MQ=255)
aGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCAt < 1:5049560/93‑1 (MQ=255)
aGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCAt > 1:1047387/1‑93 (MQ=255)
gTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATc > 1:3563184/1‑93 (MQ=255)
gTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATc < 2:2614070/93‑1 (MQ=255)
tctcAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCt > 1:5672586/1‑93 (MQ=255)
tctcAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCt > 1:5080772/1‑93 (MQ=255)
ctcAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTTGTGCCGGAAAACATTGCACGTCATCTg < 1:3616977/93‑1 (MQ=255)
ctcAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTg < 2:3468016/93‑1 (MQ=255)
tcAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTgg < 1:5508288/93‑1 (MQ=255)
tcAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTgg > 2:1132120/1‑93 (MQ=255)
cAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCGCGTCATCTGGa > 1:6119725/1‑93 (MQ=255)
cAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGa < 1:5248847/93‑1 (MQ=255)
aaTAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGaa > 1:4836234/1‑93 (MQ=255)
aaTAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGaa < 1:5127552/93‑1 (MQ=255)
aTAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAg > 1:4091393/1‑93 (MQ=255)
aTAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAg < 2:628614/93‑1 (MQ=255)
aTAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAg > 2:5535592/1‑93 (MQ=255)
tAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGc > 1:1798928/1‑93 (MQ=255)
aaCCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCg > 2:1303830/1‑93 (MQ=255)
aaCCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCg > 1:909787/1‑93 (MQ=255)
aCCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCgg < 2:4423035/93‑1 (MQ=255)
ccTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCggg > 1:4899236/1‑93 (MQ=255)
tttCGTTAATGGCTCTCGCCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGaa < 2:3786820/93‑1 (MQ=255)
tttCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGaa > 1:4938394/1‑93 (MQ=255)
tttCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGaa > 1:3859765/1‑93 (MQ=255)
cttCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGaa < 1:4248135/92‑1 (MQ=255)
tCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATg < 2:6113638/93‑1 (MQ=255)
gTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGaa > 1:646607/1‑93 (MQ=255)
ttAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGaaa < 2:2493714/93‑1 (MQ=255)
ttAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGaaa < 2:5319802/93‑1 (MQ=255)
ttAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGaaa > 2:3643623/1‑93 (MQ=255)
aaTGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAAcc > 1:4525258/1‑93 (MQ=255)
tGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGt > 1:1165234/1‑93 (MQ=255)
ggCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGtt < 2:3047358/93‑1 (MQ=255)
gcgcTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTg < 2:452254/93‑1 (MQ=255)
gcTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCa > 1:5764031/1‑93 (MQ=255)
gcTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCa > 1:3712697/1‑93 (MQ=255)
cTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCaa > 2:3455319/1‑93 (MQ=255)
cTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCaa > 1:3337636/1‑93 (MQ=255)
cACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGc > 1:2962455/1‑93 (MQ=255)
aCCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGcc < 2:2561561/93‑1 (MQ=255)
cATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGc > 1:1064431/1‑93 (MQ=255)
aTCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCa > 2:5596411/1‑93 (MQ=255)
aTCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCa < 2:4777654/93‑1 (MQ=255)
tCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCAc > 2:1565166/1‑93 (MQ=255)
tCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCAc > 1:4235578/1‑93 (MQ=255)
cGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACt < 2:926162/93‑1 (MQ=255)
cGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACt < 1:1268990/93‑1 (MQ=255)
cGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACt < 1:1440871/93‑1 (MQ=255)
cTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGc < 1:2137238/93‑1 (MQ=255)
tACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCa > 2:5024156/1‑93 (MQ=255)
aCTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCaa < 2:5664219/93‑1 (MQ=255)
tGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAgg > 2:3908465/1‑93 (MQ=255)
tGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAgg < 2:5195840/93‑1 (MQ=255)
ggTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAgga > 2:5896623/1‑92 (MQ=255)
gTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTa < 1:1296842/93‑1 (MQ=255)
tttCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTAc < 1:3513059/93‑1 (MQ=255)
ttCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACt < 1:2379490/93‑1 (MQ=255)
tgcGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACt < 1:542227/91‑1 (MQ=255)
tCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTc < 2:5381874/93‑1 (MQ=255)
cGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTcg > 2:281601/1‑93 (MQ=255)
gtggATGACGCCATCGTGGTGCCGGAAACCATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGaa < 2:66297/93‑1 (MQ=255)
tggATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAg < 1:397984/93‑1 (MQ=255)
tggATGACGCAATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAACCCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAg < 2:2432918/93‑1 (MQ=255)
ggATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGt > 1:1384907/1‑93 (MQ=255)
gATGGCGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTc < 1:1788470/93‑1 (MQ=255)
gATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGTATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTc > 2:4028493/1‑93 (MQ=255)
gATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTc > 1:2481106/1‑93 (MQ=255)
aTGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCg < 1:3434403/93‑1 (MQ=255)
aCGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGtt < 2:4889141/93‑1 (MQ=255)
aCGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGtt > 2:5346094/1‑93 (MQ=255)
gCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGtttt > 2:1942338/1‑93 (MQ=255)
ccATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTa > 2:3961415/1‑93 (MQ=255)
cATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTAc < 2:6147562/93‑1 (MQ=255)
aTCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACg < 2:5817475/93‑1 (MQ=255)
aTCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACg > 2:872859/1‑93 (MQ=255)
tCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACgg < 2:3254726/93‑1 (MQ=255)
cGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCTGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACGGt < 1:158078/93‑1 (MQ=255)
cGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACGGt < 2:3693435/93‑1 (MQ=255)
cGTGGGGCCGAAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACGGt < 2:2345998/93‑1 (MQ=255)
tggtgCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACGGTGc > 2:4163169/1‑93 (MQ=255)
tggtgCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACGGTGc > 1:4451674/1‑93 (MQ=255)
ggtgCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACGGTGCt > 1:1730294/1‑93 (MQ=255)
tgCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACGGTGCTGt > 1:3111054/1‑93 (MQ=255)
|
GTACCTGTGCGGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCTGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACGGTGCTGT > NC_000913/2157538‑2157716
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGATGTACCTGTGCGGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCTGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACGGTGCTGTCGAT > NC_000913/2157534‑2157720
|
CGATGTACCTGTGCGGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCC > SRR4302533.1838781/1‑94 (MQ=60)
TGTACCTGTGCGGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGA > SRR4302533.203774/1‑94 (MQ=60)
GTACCTGTGCGGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAA > SRR4302533.4660878/1‑94 (MQ=60)
TACCTGTGCGGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAA < SRR4302533.5912521/94‑1 (MQ=60)
TACCTGTGCGGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAA > SRR4302533.4722696/1‑94 (MQ=60)
ACCTGTGCGGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAA > SRR4302533.5987341/1‑94 (MQ=60)
CCTGTGCGGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAAC > SRR4302533.3077386/1‑94 (MQ=60)
GTGCGGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATT < SRR4302533.776432/94‑1 (MQ=60)
TGCGGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTG < SRR4302533.2848292/94‑1 (MQ=60)
GCGGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGC < SRR4302533.3615836/94‑1 (MQ=60)
CGGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCA > SRR4302533.2313627/1‑94 (MQ=60)
GGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCAC < SRR4302533.5654099/94‑1 (MQ=60)
GGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCAC > SRR4302533.4870614/1‑94 (MQ=60)
GGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCAC < SRR4302533.4942972/94‑1 (MQ=60)
GGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCAC < SRR4302533.6314206/94‑1 (MQ=60)
GATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACG < SRR4302533.4510172/94‑1 (MQ=60)
ATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGT > SRR4302533.5786530/1‑94 (MQ=60)
ATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGT > SRR4302533.4762096/1‑94 (MQ=60)
TTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTC > SRR4302533.5154112/1‑94 (MQ=60)
TCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCA < SRR4302533.5669411/94‑1 (MQ=60)
CAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCAT > SRR4302533.4410785/1‑94 (MQ=60)
CAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCAT > SRR4302533.1053542/1‑94 (MQ=60)
AGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATC > SRR4302533.3585139/1‑94 (MQ=60)
AGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATC < SRR4302533.5080103/94‑1 (MQ=60)
GTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCT > SRR4302533.5111478/1‑94 (MQ=60)
GTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCT > SRR4302533.5706846/1‑94 (MQ=60)
GTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATCACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCT < SRR4302533.1418031/94‑1 (MQ=60)
TCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTG < SRR4302533.1807243/94‑1 (MQ=60)
CTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTTGTGCCGGAAAACATTGCACGTCATCTGG < SRR4302533.3639228/94‑1 (MQ=60)
CTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGG < SRR4302533.2387867/94‑1 (MQ=60)
TCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCGCGTCATCTGGA > SRR4302533.6156630/1‑94 (MQ=60)
TCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGA < SRR4302533.5541537/94‑1 (MQ=60)
CAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAA > SRR4302533.4865547/1‑94 (MQ=60)
CAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAA < SRR4302533.5280396/94‑1 (MQ=60)
AATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTTGAAG > SRR4302533.3671334/1‑94 (MQ=60)
AATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAG < SRR4302533.21948/94‑1 (MQ=60)
AATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAG < SRR4302533.5158527/94‑1 (MQ=60)
AATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAG > SRR4302533.4116298/1‑94 (MQ=60)
ATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGC > SRR4302533.1809874/1‑94 (MQ=60)
TAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCG > SRR4302533.915122/1‑94 (MQ=60)
ACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGG > SRR4302533.4928920/1‑94 (MQ=60)
ACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGG < SRR4302533.4260083/94‑1 (MQ=60)
CTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAA > SRR4302533.4968290/1‑94 (MQ=60)
CTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAA > SRR4302533.3883329/1‑94 (MQ=60)
CTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAAT < SRR4302533.4273775/94‑1 (MQ=60)
TTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATG < SRR4302533.396657/94‑1 (MQ=60)
CGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAA > SRR4302533.650416/1‑94 (MQ=60)
GTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAA > SRR4302533.1754588/1‑94 (MQ=60)
TTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAAC > SRR4302533.5186982/1‑94 (MQ=60)
TTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAAC > SRR4302533.4265155/1‑94 (MQ=60)
TAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACC > SRR4302533.4552654/1‑94 (MQ=60)
ATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGT > SRR4302533.1172222/1‑94 (MQ=60)
ATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGT > SRR4302533.6076393/1‑94 (MQ=60)
TGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTT < SRR4302533.3815385/94‑1 (MQ=60)
GGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTG < SRR4302533.4988500/94‑1 (MQ=60)
GCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGC < SRR4302533.5693463/94‑1 (MQ=60)
CGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCA > SRR4302533.3735496/1‑94 (MQ=60)
CGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCA > SRR4302533.1219694/1‑94 (MQ=60)
CGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCA > SRR4302533.5798817/1‑94 (MQ=60)
GCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAA > SRR4302533.3358264/1‑94 (MQ=60)
CTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAG < SRR4302533.5913185/94‑1 (MQ=60)
TCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGC > SRR4302533.2980565/1‑94 (MQ=60)
CCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGC > SRR4302533.1070684/1‑94 (MQ=60)
CATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCA < SRR4302533.4097591/94‑1 (MQ=60)
ATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCAC > SRR4302533.3446824/1‑94 (MQ=60)
ATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCAC > SRR4302533.4261166/1‑94 (MQ=60)
ATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCAC > SRR4302533.3271573/1‑94 (MQ=60)
TCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACT < SRR4302533.1356478/94‑1 (MQ=60)
CGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTG < SRR4302533.3123612/94‑1 (MQ=60)
CGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTG < SRR4302533.1449565/94‑1 (MQ=60)
CGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTG < SRR4302533.1276586/94‑1 (MQ=60)
GCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGA > SRR4302533.1068517/1‑94 (MQ=60)
CTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCA < SRR4302533.2150418/94‑1 (MQ=60)
TACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGCAGCGGGAATGAAACCGTTGCAAGCCGCACTACAA > SRR4302533.5410963/1‑94 (MQ=60)
TACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAA < SRR4302533.5484584/94‑1 (MQ=60)
TACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAA < SRR4302533.1125399/94‑1 (MQ=60)
TACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAA > SRR4302533.5085446/1‑94 (MQ=60)
ACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAG > SRR4302533.3900903/1‑94 (MQ=60)
GTTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTAC < SRR4302533.1304648/94‑1 (MQ=60)
TTTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACT < SRR4302533.3534714/94‑1 (MQ=60)
TTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTC < SRR4302533.1001474/94‑1 (MQ=60)
TTCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTC < SRR4302533.2394211/94‑1 (MQ=60)
TGCGTGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTC < SRR4302533.545447/94‑1 (MQ=60)
TGGTGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGA > SRR4302533.1281060/1‑94 (MQ=60)
TGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGT > SRR4302533.1393240/1‑94 (MQ=60)
TGGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGT < SRR4302533.400389/94‑1 (MQ=60)
GGATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTC > SRR4302533.2496407/1‑94 (MQ=60)
GATGGCGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCG < SRR4302533.1799345/94‑1 (MQ=60)
ATGACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGG < SRR4302533.3455617/94‑1 (MQ=60)
GACGCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTT < SRR4302533.3550675/94‑1 (MQ=60)
GCCATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTA > SRR4302533.3470377/1‑94 (MQ=60)
CGTCGGGGTGCCGGAAAACATGGCACGTCACCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACG < SRR4302533.1452321/94‑1 (MQ=60)
CATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACG > SRR4302533.2453797/1‑94 (MQ=60)
CATCGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACG < SRR4302533.2997943/94‑1 (MQ=60)
CGTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCTGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACGGTG < SRR4302533.159086/94‑1 (MQ=60)
GTGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACGGTGC > SRR4302533.4478587/1‑94 (MQ=60)
TGGTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACGGTGCT > SRR4302533.1740784/1‑94 (MQ=60)
GTGCCGGAAAACATTGCCCGTCATCTGGAAGCGGGAATGAAACTGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACGGTGCTGT < SRR4302533.581148/94‑1 (MQ=60)
GTGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACGGTGCTGT > SRR4302533.3130179/1‑94 (MQ=60)
TGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACGGTGCTGTC > SRR4302533.1898795/1‑94 (MQ=60)
TGCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACGGTGCTGTC < SRR4302533.1607122/94‑1 (MQ=60)
GCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACGGTGCTGTCG > SRR4302533.3651951/1‑94 (MQ=60)
GCCGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACGGTGCTGTCG < SRR4302533.3262798/94‑1 (MQ=60)
CGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACGGTGCTGTCGAT > SRR4302533.323923/1‑94 (MQ=60)
CGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACGGTGCTGTCGAT > SRR4302533.753110/1‑94 (MQ=60)
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CGATGTACCTGTGCGGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCTGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACGGTGCTGTCGAT > NC_000913/2157534‑2157720
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
