Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,732,361 |
T→C |
T232A (ACC→GCC) |
yfiH ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,732,361 | 0 | T | C | 100.0%
| 639.8
/ NA
| 198 | T232A (ACC→GCC) | yfiH | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (98/100); total (98/100) |
Only 100 of 211 total aligned reads displayed.
AGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGTCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACACCCACGTTCGCCA > NC_000913/2732271‑2732450
|
gATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCtt < 2:2602829/93‑1 (MQ=255)
gATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCtt > 1:2461789/1‑93 (MQ=255)
aTTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTg > 1:2263574/1‑93 (MQ=255)
ttAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGt < 1:4791205/93‑1 (MQ=255)
ttAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGt < 1:6117056/93‑1 (MQ=255)
ttAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGt > 1:1491596/1‑93 (MQ=255)
ttAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGt < 2:6274138/93‑1 (MQ=255)
aTGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTcgc > 2:3938804/1‑93 (MQ=255)
tgtgAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTcgcg > 1:1193881/1‑93 (MQ=255)
gtgAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGcga < 1:2445304/93‑1 (MQ=255)
tgAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGcgac > 1:7918/1‑93 (MQ=255)
tgAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGcgac > 1:1794162/1‑93 (MQ=255)
gaaaagaaaaTCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGcgacg > 1:1847266/1‑93 (MQ=255)
gaaaagaaaaTCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGcgacg < 1:2204362/93‑1 (MQ=255)
aaaagaaaaTCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGcgacga > 2:5976497/1‑93 (MQ=255)
aaaagaaaaTCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGcgacga > 2:759772/1‑93 (MQ=255)
aaagaaaaTCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGAt > 2:2083576/1‑93 (MQ=255)
aaagaaaaTCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGAt < 1:95027/93‑1 (MQ=255)
aaagaaaaTCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGAt < 1:5682596/93‑1 (MQ=255)
aagaaaaTCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATa > 1:5439583/1‑93 (MQ=255)
aagaaaaTCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATa > 1:762274/1‑93 (MQ=255)
agaaaaTCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATaa < 2:2322878/93‑1 (MQ=255)
gaaaaTCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAag > 2:1187658/1‑93 (MQ=255)
aaaaTCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAaga < 1:833222/93‑1 (MQ=255)
aaaTCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAagag < 1:1470004/93‑1 (MQ=255)
aaTCACGCGTACCGGATCGTCTTGGTTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGCTGGCCTTGTTGCGACGATAAgaga > 1:3264958/1‑93 (MQ=255)
aaTCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAgaga < 1:2793695/93‑1 (MQ=255)
aaTCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAgaga < 1:5973587/93‑1 (MQ=255)
aTCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGagaa < 2:2734358/93‑1 (MQ=255)
aTCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGagaa < 2:3823422/93‑1 (MQ=255)
aTCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGagaa < 2:3464625/93‑1 (MQ=255)
aTCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGagaa > 1:3086935/1‑93 (MQ=255)
tCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGagaag > 2:4881757/1‑93 (MQ=255)
cACGCGTGCCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGagaaga < 2:1382182/93‑1 (MQ=255)
cACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGagaaga > 1:4132752/1‑93 (MQ=255)
cACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGagaaga > 2:4562102/1‑93 (MQ=255)
cACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGagaaga < 2:5083248/93‑1 (MQ=255)
aCGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAgaagaa < 1:5324983/93‑1 (MQ=255)
cgcgTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGaaa < 1:1313384/93‑1 (MQ=255)
gcgTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAg > 2:2884872/1‑93 (MQ=255)
gTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGtc < 2:1904276/93‑1 (MQ=255)
gTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGtc > 2:6042445/1‑93 (MQ=255)
ggATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCCtt > 1:3116051/1‑93 (MQ=255)
ggATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCAtt > 1:4872894/1‑93 (MQ=255)
ggATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCAtt < 1:6025764/93‑1 (MQ=255)
ggATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCAtt > 2:1264705/1‑93 (MQ=255)
ggATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCAtt > 1:2746007/1‑93 (MQ=255)
gATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCAttt < 1:2604664/93‑1 (MQ=255)
gATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCAttt < 1:4374716/93‑1 (MQ=255)
gATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCAttt < 2:1106417/93‑1 (MQ=255)
gATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGAACGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCAttt > 2:5550182/1‑93 (MQ=255)
aTCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCAtttt > 2:895635/1‑93 (MQ=255)
aTCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCAtttt > 2:2490287/1‑93 (MQ=255)
aTCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCAtttt > 1:4612368/1‑93 (MQ=255)
cGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTcc < 2:1579651/93‑1 (MQ=255)
tCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGt > 1:5886650/1‑93 (MQ=255)
tCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGt > 1:6075729/1‑93 (MQ=255)
tGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGtata < 2:10553/93‑1 (MQ=255)
tGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGtata < 1:5506999/93‑1 (MQ=255)
aTTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATg > 2:44905/1‑93 (MQ=255)
aTTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATg < 2:2138840/93‑1 (MQ=255)
ttCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGt < 2:931161/93‑1 (MQ=255)
ttCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGt < 2:5627692/93‑1 (MQ=255)
tttAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACa < 1:5891115/93‑1 (MQ=255)
ttAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACaa < 1:171913/93‑1 (MQ=255)
ttAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACaa > 2:6104864/1‑93 (MQ=255)
ttAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACaa < 2:5301378/93‑1 (MQ=255)
tAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAAc < 2:5997356/93‑1 (MQ=255)
aGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACg < 1:6227602/93‑1 (MQ=255)
gTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGt > 1:3670893/1‑93 (MQ=255)
ttATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTc < 1:3423409/93‑1 (MQ=255)
ttATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTACATGTACAACggcc > 2:4343383/1‑91 (MQ=255)
tatCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTcgcc > 2:2187906/1‑93 (MQ=255)
tCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTcgccgc < 2:5150776/93‑1 (MQ=255)
ccAAATGANANTTGCCATCCGACCNGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGaa < 2:1882704/93‑1 (MQ=255)
cAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGaaa > 2:162518/1‑93 (MQ=255)
cAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGaaa > 2:4243598/1‑93 (MQ=255)
aaTGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAAt > 2:1476898/1‑93 (MQ=255)
gAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTg > 2:5234850/1‑93 (MQ=255)
aaaCTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGc < 1:1120860/93‑1 (MQ=255)
aaaCTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGc > 1:2163008/1‑93 (MQ=255)
aCTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTc < 1:1085579/93‑1 (MQ=255)
aCTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTc > 1:3460194/1‑93 (MQ=255)
cTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCa > 2:4009660/1‑93 (MQ=255)
attGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCa < 1:4991417/92‑1 (MQ=255)
ttGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCaa > 1:594408/1‑93 (MQ=255)
ttGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCaa > 1:1285355/1‑93 (MQ=255)
tGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAac < 2:57147/93‑1 (MQ=255)
gCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAaca > 1:5586074/1‑93 (MQ=255)
cATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACAcc > 1:209571/1‑93 (MQ=255)
aTACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGCAAATTTGCTCAACAccc > 2:3649066/1‑93 (MQ=255)
aCGCCCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTGCCGTATATGTACAACGGTCGCCGCCGAAAAGTTGCTCAACACCCAc < 2:2949053/93‑1 (MQ=255)
ccGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACACCCACGTTc > 1:3204359/1‑93 (MQ=255)
cGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACACCCACGTTCg < 2:5819513/93‑1 (MQ=255)
cGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACACCCACGTTCg > 2:1144007/1‑93 (MQ=255)
ggtggcCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACACCCACGTTCGc > 1:3070184/1‑93 (MQ=255)
ggtggcCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACACCCACGTTCGc > 1:3941263/1‑93 (MQ=255)
gtggcCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACACCCACGTTCGcc > 1:716127/1‑93 (MQ=255)
gtggcCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACACCCACGTTCGcc < 2:5732666/93‑1 (MQ=255)
tggcCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACACCCCCGTTCGCCa < 1:4920938/93‑1 (MQ=255)
|
AGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGTCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACACCCACGTTCGCCA > NC_000913/2732271‑2732450
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGTCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACACCCACGTTCGCCAGAC > NC_000913/2732268‑2732453
|
ACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGC > SRR4302533.4760896/1‑94 (MQ=60)
CCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCC < SRR4302533.850196/94‑1 (MQ=60)
CCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGCTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCC > SRR4302533.1070555/1‑94 (MQ=60)
CAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCT > SRR4302533.6025714/1‑94 (MQ=60)
AGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTT > SRR4302533.2476976/1‑94 (MQ=60)
GATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTG > SRR4302533.2277581/1‑94 (MQ=60)
ATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGT > SRR4302533.1500591/1‑94 (MQ=60)
TTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTC < SRR4302533.6153956/94‑1 (MQ=60)
TTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTC > SRR4302533.5598901/1‑94 (MQ=60)
TTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTC < SRR4302533.4820237/94‑1 (MQ=60)
ATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCG > SRR4302533.1201059/1‑94 (MQ=60)
ATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATGCTTGAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCG < SRR4302533.3075180/94‑1 (MQ=60)
TGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGC > SRR4302533.2118727/1‑94 (MQ=60)
TGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGA > SRR4302533.2962396/1‑94 (MQ=60)
GTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGAC > SRR4302533.1805081/1‑94 (MQ=60)
GTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGAC < SRR4302533.2460399/94‑1 (MQ=60)
GTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGAC > SRR4302533.7989/1‑94 (MQ=60)
TGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACG > SRR4302533.1858527/1‑94 (MQ=60)
TGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACG < SRR4302533.1317517/94‑1 (MQ=60)
GAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGA < SRR4302533.2217949/94‑1 (MQ=60)
GAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGA > SRR4302533.5040328/1‑94 (MQ=60)
AAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGAT > SRR4302533.734709/1‑94 (MQ=60)
AAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGAT > SRR4302533.1422382/1‑94 (MQ=60)
AAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATA < SRR4302533.5716924/94‑1 (MQ=60)
AAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATA < SRR4302533.95624/94‑1 (MQ=60)
AAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATA > SRR4302533.3471526/1‑94 (MQ=60)
AAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATA > SRR4302533.5472342/1‑94 (MQ=60)
AAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATA > SRR4302533.766761/1‑94 (MQ=60)
AAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATA < SRR4302533.178502/94‑1 (MQ=60)
AGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAG < SRR4302533.3912099/94‑1 (MQ=60)
AGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAG < SRR4302533.1256949/94‑1 (MQ=60)
AAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAG < SRR4302533.838105/94‑1 (MQ=60)
AAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAG < SRR4302533.2061025/94‑1 (MQ=60)
AAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAG < SRR4302533.1665596/94‑1 (MQ=60)
AAATCACGCGTACCGGATCGTCTTGGTTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGCTGGCCTTGTTGCGACGATAAGAGA > SRR4302533.3285103/1‑94 (MQ=60)
AAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGA < SRR4302533.1478862/94‑1 (MQ=60)
AAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGA < SRR4302533.1490896/94‑1 (MQ=60)
AAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGA < SRR4302533.2665014/94‑1 (MQ=60)
AATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAA > SRR4302533.3105916/1‑94 (MQ=60)
AATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAA < SRR4302533.6009743/94‑1 (MQ=60)
AATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAA < SRR4302533.6009741/94‑1 (MQ=60)
AATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAA < SRR4302533.2810880/94‑1 (MQ=60)
ATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAG < SRR4302533.6117666/94‑1 (MQ=60)
TCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGA > SRR4302533.4157842/1‑94 (MQ=60)
CACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAA < SRR4302533.4842588/94‑1 (MQ=60)
ACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAA < SRR4302533.5356896/94‑1 (MQ=60)
ACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAA < SRR4302533.1179657/94‑1 (MQ=60)
CGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAG < SRR4302533.1321265/94‑1 (MQ=60)
GCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGT > SRR4302533.1095701/1‑94 (MQ=60)
TACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTC < SRR4302533.4950614/94‑1 (MQ=60)
ACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCG > SRR4302533.6084844/1‑94 (MQ=60)
CCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCAT < SRR4302533.799964/94‑1 (MQ=60)
CGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCCTT > SRR4302533.3135209/1‑94 (MQ=60)
CGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATT > SRR4302533.4902419/1‑94 (MQ=60)
CGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATT > SRR4302533.2762843/1‑94 (MQ=60)
GGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTT < SRR4302533.6062277/94‑1 (MQ=60)
GATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTT < SRR4302533.4401122/94‑1 (MQ=60)
GATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTT > SRR4302533.4640311/1‑94 (MQ=60)
GATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTT < SRR4302533.2620663/94‑1 (MQ=60)
GATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTT < SRR4302533.1888710/94‑1 (MQ=60)
ATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTC > SRR4302533.3126199/1‑94 (MQ=60)
TCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCC < SRR4302533.2476960/94‑1 (MQ=60)
GTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGT > SRR4302533.6112478/1‑94 (MQ=60)
GTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGT < SRR4302533.3292140/94‑1 (MQ=60)
GTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGT > SRR4302533.5922218/1‑94 (MQ=60)
CTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTAT > SRR4302533.926407/1‑94 (MQ=60)
CTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTAT > SRR4302533.2182115/1‑94 (MQ=60)
TGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATAT < SRR4302533.4966415/94‑1 (MQ=60)
TGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATAT < SRR4302533.5540230/94‑1 (MQ=60)
ATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGT > SRR4302533.5799723/1‑94 (MQ=60)
TTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTA < SRR4302533.566697/94‑1 (MQ=60)
TCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTAC > SRR4302533.4347326/1‑94 (MQ=60)
CTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACA < SRR4302533.3104589/94‑1 (MQ=60)
CTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACA < SRR4302533.3574098/94‑1 (MQ=60)
TTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAA < SRR4302533.3181025/94‑1 (MQ=60)
TTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAA < SRR4302533.5926701/94‑1 (MQ=60)
TTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGACAGTCTCATTTTCCGTATATGTACAAC > SRR4302533.535890/1‑94 (MQ=60)
TTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAAC < SRR4302533.172998/94‑1 (MQ=60)
TAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACG < SRR4302533.2807911/94‑1 (MQ=60)
TAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACG > SRR4302533.4016742/1‑94 (MQ=60)
AGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGG < SRR4302533.6264911/94‑1 (MQ=60)
GGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGT > SRR4302533.3693454/1‑94 (MQ=60)
GTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTC < SRR4302533.4801439/94‑1 (MQ=60)
TTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCG < SRR4302533.3444558/94‑1 (MQ=60)
TTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCG < SRR4302533.2241127/94‑1 (MQ=60)
TTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCG < SRR4302533.787543/94‑1 (MQ=60)
ATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCC < SRR4302533.2497743/94‑1 (MQ=60)
ATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCC < SRR4302533.5503973/94‑1 (MQ=60)
ATATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCC < SRR4302533.4128663/94‑1 (MQ=60)
TATCAGCGAAATGAAACGTGCCATACGACCGTTTGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCG < SRR4302533.182244/94‑1 (MQ=60)
ATCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGC > SRR4302533.6114474/1‑94 (MQ=60)
TCAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCC < SRR4302533.964057/94‑1 (MQ=60)
CAGCCAAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCG > SRR4302533.6282439/1‑94 (MQ=60)
AAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAAT < SRR4302533.2964380/94‑1 (MQ=60)
AAATGAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAAT > SRR4302533.4605604/1‑94 (MQ=60)
GAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGC > SRR4302533.5923000/1‑94 (MQ=60)
GAAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGC > SRR4302533.2176319/1‑94 (MQ=60)
AAACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCT < SRR4302533.1127509/94‑1 (MQ=60)
AACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTC > SRR4302533.3481553/1‑94 (MQ=60)
ACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCA < SRR4302533.1091980/94‑1 (MQ=60)
ACTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCA < SRR4302533.2329686/94‑1 (MQ=60)
CTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAA > SRR4302533.1293085/1‑94 (MQ=60)
CTTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAA > SRR4302533.597913/1‑94 (MQ=60)
ATTGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAA < SRR4302533.5021678/94‑1 (MQ=60)
TGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACA > SRR4302533.5619825/1‑94 (MQ=60)
TGCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACA > SRR4302533.6231504/1‑94 (MQ=60)
GCCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACAC < SRR4302533.5965983/94‑1 (MQ=60)
CCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACACC < SRR4302533.548857/94‑1 (MQ=60)
CCATACGACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACACC > SRR4302533.210896/1‑94 (MQ=60)
ACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACACCCACGTTC > SRR4302533.3254421/1‑94 (MQ=60)
ACCGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACACCCACGTTC > SRR4302533.3224083/1‑94 (MQ=60)
CGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACACCCACGTTCGC > SRR4302533.3089033/1‑94 (MQ=60)
CGGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACACCCACGTTCGC > SRR4302533.3965312/1‑94 (MQ=60)
GGTGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACACCCACGTTCGCC > SRR4302533.720350/1‑94 (MQ=60)
TGGCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACACCCCCGTTCGCCAG < SRR4302533.4950747/94‑1 (MQ=60)
GCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACACCCACGTTCGCCAGAC < SRR4302533.2593555/94‑1 (MQ=60)
GCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACACCCACGTTCGCCAGAC < SRR4302533.4057838/94‑1 (MQ=60)
GCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACACCCACGTTCGCCAGAC > SRR4302533.1829243/1‑94 (MQ=60)
GCCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACACCCACGTTCGCCAGAC < SRR4302533.343175/94‑1 (MQ=60)
GCCTTGTCGCGACCATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACACCCACGTTCGCCAGAC < SRR4302533.4953142/94‑1 (MQ=60)
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ACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGACCGGTGGTCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGCTCAACACCCACGTTCGCCAGAC > NC_000913/2732268‑2732453
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
