Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,784,829 |
A→G |
H21R (CAC→CGC) |
b2655 → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,784,829 | 0 | A | G | 100.0%
| 682.4
/ NA
| 208 | H21R (CAC→CGC) | b2655 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (92/116); total (92/116) |
Only 100 of 210 total aligned reads displayed.
GAAAAACATAGGTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCACATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATGTATAT > NC_000913/2784739‑2784917
|
gaaaAACATAGGTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCcgca < 2:4627761/93‑1 (MQ=255)
aaaaaCATAGGTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCAt < 2:4057236/93‑1 (MQ=255)
aaCATAGGTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATtat < 1:4900441/93‑1 (MQ=255)
cATAGGTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTatat > 2:5167248/1‑93 (MQ=255)
cATAGGTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTatat > 1:3776825/1‑93 (MQ=255)
aTAGGTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATc > 2:2527152/1‑93 (MQ=255)
aGGTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTg < 2:3431555/93‑1 (MQ=255)
ggTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGa > 2:4255477/1‑93 (MQ=255)
gTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGAc < 2:5368042/93‑1 (MQ=255)
tttATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAAAATTTCACCCGCATTATATCTGACa < 1:2779107/93‑1 (MQ=255)
ttATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCTCCCGCATTATATCTGACaa < 2:3383462/93‑1 (MQ=255)
ttATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACaa > 1:5771892/1‑93 (MQ=255)
ttATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACaa > 1:22759/1‑93 (MQ=255)
ttATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACaa > 2:4207961/1‑93 (MQ=255)
tCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAAcc > 1:959765/1‑93 (MQ=255)
cAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCt < 2:3963089/93‑1 (MQ=255)
cAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCt < 2:32201/93‑1 (MQ=255)
cAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCt < 2:829140/93‑1 (MQ=255)
aaCGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCtt > 1:1012872/1‑93 (MQ=255)
aaCGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCtt > 1:2905149/1‑93 (MQ=255)
aaCGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGGGCTGAACATTTCCCCCGCATTATATCTGACAAACCtt < 2:5187840/93‑1 (MQ=255)
cGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTcc > 1:5428787/1‑93 (MQ=255)
gagaTACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTccc < 2:3416318/93‑1 (MQ=255)
gagaTACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTccc < 2:5073994/93‑1 (MQ=255)
agaTACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTcccc < 2:1920244/93‑1 (MQ=255)
aTACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCaa > 1:3419530/1‑93 (MQ=255)
tACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCaaa > 2:1280344/1‑93 (MQ=255)
tACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCaaa > 2:6106283/1‑93 (MQ=255)
tACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCaaa > 2:3700534/1‑93 (MQ=255)
tACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCaaa > 1:4723786/1‑93 (MQ=255)
cAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCaaaaa > 2:3933465/1‑92 (MQ=255)
aaTGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTTGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGa < 1:3614863/93‑1 (MQ=255)
aaTGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGa > 1:3340783/1‑93 (MQ=255)
aaTGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGa < 1:618852/93‑1 (MQ=255)
aTGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGAt > 1:2704539/1‑93 (MQ=255)
tGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATa < 1:1329769/93‑1 (MQ=255)
tGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATa < 1:5551862/93‑1 (MQ=255)
tGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAata < 1:260670/93‑1 (MQ=255)
gAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAatat < 2:594570/93‑1 (MQ=255)
gAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAatat < 2:1454819/93‑1 (MQ=255)
aaGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGt < 2:1704250/93‑1 (MQ=255)
agagGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGtt < 2:1149624/93‑1 (MQ=255)
gagGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTg > 2:3003996/1‑93 (MQ=255)
gagGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTg < 1:4281363/93‑1 (MQ=255)
gagGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTg < 2:1613789/93‑1 (MQ=255)
agGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGc > 1:4562807/1‑93 (MQ=255)
agGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGc < 2:248883/93‑1 (MQ=255)
tGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCata < 2:4547818/93‑1 (MQ=255)
tGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCata > 2:5834976/1‑93 (MQ=255)
tGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCata < 2:3322671/93‑1 (MQ=255)
tGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCata > 1:1591203/1‑93 (MQ=255)
tGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCata < 1:1906504/93‑1 (MQ=255)
gATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCatat > 1:5871571/1‑93 (MQ=255)
tAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGc > 2:653533/1‑93 (MQ=255)
aaCAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCt > 2:4760315/1‑93 (MQ=255)
aCAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTa > 2:2637491/1‑93 (MQ=255)
cAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTAt > 1:4470597/1‑93 (MQ=255)
aGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTAtt < 1:4605455/93‑1 (MQ=255)
gCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTa < 2:5265223/93‑1 (MQ=255)
ggTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAAc < 1:6219761/93‑1 (MQ=255)
ggTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCCATTAAc > 1:1246926/1‑93 (MQ=255)
gtgtTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACa < 2:4837481/93‑1 (MQ=255)
gtgtTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACa < 1:4117247/93‑1 (MQ=255)
tgtTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACAt > 2:2455009/1‑93 (MQ=255)
gtTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACAtt < 2:270720/93‑1 (MQ=255)
gtTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACAtt > 2:2039505/1‑93 (MQ=255)
ttATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTcc > 1:1568021/1‑93 (MQ=255)
tCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGa > 2:567677/1‑93 (MQ=255)
tCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGa > 2:4774245/1‑93 (MQ=255)
tCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGa < 2:5472670/93‑1 (MQ=255)
tCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGa > 1:1110228/1‑93 (MQ=255)
tCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGa > 1:3082844/1‑93 (MQ=255)
tCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGa < 1:5179417/93‑1 (MQ=255)
aGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACt > 1:4751997/1‑93 (MQ=255)
gTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTa < 2:5602929/93‑1 (MQ=255)
tATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTAt < 1:4929675/93‑1 (MQ=255)
aTGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATg < 1:4137111/93‑1 (MQ=255)
tGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGa > 1:2127102/1‑93 (MQ=255)
tGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGa > 2:6047487/1‑93 (MQ=255)
tGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGa > 1:3471469/1‑93 (MQ=255)
tGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGa > 2:4983997/1‑93 (MQ=255)
ggTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAg < 1:4655953/93‑1 (MQ=255)
tCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCt < 2:2341209/93‑1 (MQ=255)
gTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTgg < 2:2794587/93‑1 (MQ=255)
tGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGc < 1:393155/93‑1 (MQ=255)
tGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGc < 1:1517672/93‑1 (MQ=255)
cTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAg < 1:4380371/93‑1 (MQ=255)
gAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGcc > 2:2368230/1‑93 (MQ=255)
aCATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGa > 2:4291862/1‑93 (MQ=255)
cATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGAt > 2:5285541/1‑93 (MQ=255)
cATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGAt > 1:4068687/1‑93 (MQ=255)
cATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGAt < 1:1511138/93‑1 (MQ=255)
aTTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATg < 2:1347001/93‑1 (MQ=255)
aTTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATg > 2:1786502/1‑93 (MQ=255)
tttCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATGt > 1:5287047/1‑93 (MQ=255)
tttCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATGt < 1:5581153/93‑1 (MQ=255)
tttCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATGt > 1:784580/1‑93 (MQ=255)
tttCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATGt < 2:901625/93‑1 (MQ=255)
ttCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATGta < 2:4882362/93‑1 (MQ=255)
aCCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATGtatat < 2:4967812/93‑1 (MQ=255)
|
GAAAAACATAGGTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCACATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATGTATAT > NC_000913/2784739‑2784917
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAAGAAAAACATAGGTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCACATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATGTATATAATAT > NC_000913/2784736‑2784922
|
AAAGAAAAACATAGGTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCG > SRR4302533.647500/1‑94 (MQ=60)
AAACATAGGTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTAT < SRR4302533.4134495/94‑1 (MQ=60)
AAACATAGGTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTAT > SRR4302533.562029/1‑94 (MQ=60)
AACATAGGTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATA < SRR4302533.3032165/94‑1 (MQ=60)
AACATAGGTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATA < SRR4302533.4930134/94‑1 (MQ=60)
ACATAGGTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATAT > SRR4302533.3799972/1‑94 (MQ=60)
ATAGGTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCT < SRR4302533.1059967/94‑1 (MQ=60)
GGTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGAC < SRR4302533.4442690/94‑1 (MQ=60)
GGTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGAC < SRR4302533.3505886/94‑1 (MQ=60)
GTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACA < SRR4302533.4611599/94‑1 (MQ=60)
GTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACA > SRR4302533.792046/1‑94 (MQ=60)
GTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACA < SRR4302533.1603367/94‑1 (MQ=60)
TTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAA > SRR4302533.5806744/1‑94 (MQ=60)
TTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAA < SRR4302533.3838592/94‑1 (MQ=60)
TTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAA > SRR4302533.22910/1‑94 (MQ=60)
TTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAAAATTTCACCCGCATTATATCTGACAA < SRR4302533.2796178/94‑1 (MQ=60)
ATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACC > SRR4302533.965410/1‑94 (MQ=60)
ATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACC < SRR4302533.2223072/94‑1 (MQ=60)
CAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTT > SRR4302533.1018802/1‑94 (MQ=60)
CAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTT < SRR4302533.4295013/94‑1 (MQ=60)
CAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTT > SRR4302533.1355107/1‑94 (MQ=60)
CAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTT > SRR4302533.2922991/1‑94 (MQ=60)
AACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTC > SRR4302533.234073/1‑94 (MQ=60)
ACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCC > SRR4302533.5461482/1‑94 (MQ=60)
AGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCA > SRR4302533.4009972/1‑94 (MQ=60)
GATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAA > SRR4302533.3440658/1‑94 (MQ=60)
GATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAA > SRR4302533.4932697/1‑94 (MQ=60)
ATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAA > SRR4302533.4752429/1‑94 (MQ=60)
TACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAA > SRR4302533.2867235/1‑94 (MQ=60)
ACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAG > SRR4302533.4392187/1‑94 (MQ=60)
ACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAG > SRR4302533.3448239/1‑94 (MQ=60)
ACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAG < SRR4302533.3158893/94‑1 (MQ=60)
CAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGA > SRR4302533.3361430/1‑94 (MQ=60)
AATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTTGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGAT < SRR4302533.3637105/94‑1 (MQ=60)
AATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGAT < SRR4302533.622486/94‑1 (MQ=60)
AATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGAT > SRR4302533.2721130/1‑94 (MQ=60)
AATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGAT < SRR4302533.4638816/94‑1 (MQ=60)
ATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATA > SRR4302533.5166511/1‑94 (MQ=60)
TGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAA < SRR4302533.1337747/94‑1 (MQ=60)
TGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAA < SRR4302533.5585390/94‑1 (MQ=60)
TTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATA > SRR4302533.4923583/1‑94 (MQ=60)
TTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATA < SRR4302533.4649411/94‑1 (MQ=60)
TGAAAGAGGTGATAACAGCGGTGTTTATGAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATAT < SRR4302533.5806213/94‑1 (MQ=60)
TGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATAT < SRR4302533.262252/94‑1 (MQ=60)
AAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGT < SRR4302533.706558/94‑1 (MQ=60)
AAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTT < SRR4302533.2173519/94‑1 (MQ=60)
GAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGC < SRR4302533.2642977/94‑1 (MQ=60)
GAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGC < SRR4302533.4307099/94‑1 (MQ=60)
GAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGC > SRR4302533.4590476/1‑94 (MQ=60)
GGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCAT < SRR4302533.209178/94‑1 (MQ=60)
GTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATA < SRR4302533.5266358/94‑1 (MQ=60)
GTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATA > SRR4302533.1600828/1‑94 (MQ=60)
TGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATAT < SRR4302533.1918132/94‑1 (MQ=60)
TGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATAT > SRR4302533.5907061/1‑94 (MQ=60)
GATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATC > SRR4302533.6086290/1‑94 (MQ=60)
TAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCT > SRR4302533.4145433/1‑94 (MQ=60)
ACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTAT > SRR4302533.5362585/1‑94 (MQ=60)
ACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTAT < SRR4302533.1589998/94‑1 (MQ=60)
ACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTAT > SRR4302533.4497634/1‑94 (MQ=60)
AGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTA < SRR4302533.4633355/94‑1 (MQ=60)
CGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCCATTAAC > SRR4302533.1254371/1‑94 (MQ=60)
GGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACA < SRR4302533.6257049/94‑1 (MQ=60)
GGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACA > SRR4302533.1292103/1‑94 (MQ=60)
GTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACAT < SRR4302533.4142256/94‑1 (MQ=60)
TTTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCC > SRR4302533.1577463/1‑94 (MQ=60)
TTATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCT < SRR4302533.4555909/94‑1 (MQ=60)
ATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGA > SRR4302533.1116813/1‑94 (MQ=60)
ATCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGA > SRR4302533.3101796/1‑94 (MQ=60)
TCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGAC < SRR4302533.5210696/94‑1 (MQ=60)
TCAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGAC < SRR4302533.3363720/94‑1 (MQ=60)
CAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACT > SRR4302533.1524027/1‑94 (MQ=60)
CAGTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACT > SRR4302533.4780808/1‑94 (MQ=60)
GTATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTAT < SRR4302533.1563710/94‑1 (MQ=60)
TATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATG < SRR4302533.4959528/94‑1 (MQ=60)
TATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATG > SRR4302533.1161775/1‑94 (MQ=60)
ATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGA < SRR4302533.4162215/94‑1 (MQ=60)
ATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGA > SRR4302533.3492895/1‑94 (MQ=60)
ATGGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGA > SRR4302533.2140219/1‑94 (MQ=60)
GGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGC < SRR4302533.4684166/94‑1 (MQ=60)
GGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGC < SRR4302533.5896509/94‑1 (MQ=60)
GGTCGTGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGC < SRR4302533.3696740/94‑1 (MQ=60)
TGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCA < SRR4302533.395539/94‑1 (MQ=60)
TGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCA > SRR4302533.6239973/1‑94 (MQ=60)
TGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCA < SRR4302533.5468874/94‑1 (MQ=60)
TGCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCA < SRR4302533.1526807/94‑1 (MQ=60)
GCTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAG < SRR4302533.475037/94‑1 (MQ=60)
CTGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGC < SRR4302533.4406818/94‑1 (MQ=60)
TGAACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCC > SRR4302533.4756423/1‑94 (MQ=60)
ACATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGAT > SRR4302533.4093455/1‑94 (MQ=60)
CATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATG > SRR4302533.5598634/1‑94 (MQ=60)
CATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATG < SRR4302533.2747159/94‑1 (MQ=60)
CATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATG < SRR4302533.1520248/94‑1 (MQ=60)
ATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATGT > SRR4302533.789195/1‑94 (MQ=60)
ATTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATGT > SRR4302533.5318715/1‑94 (MQ=60)
TTTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATGTA < SRR4302533.5614880/94‑1 (MQ=60)
TTCACCCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATGTAT > SRR4302533.3699451/1‑94 (MQ=60)
CCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATGTATATAAT < SRR4302533.3816058/94‑1 (MQ=60)
CCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATGTATATAAT < SRR4302533.5249728/94‑1 (MQ=60)
CCGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATGTATATAAT > SRR4302533.3023941/1‑94 (MQ=60)
CGCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATGTATATAATA > SRR4302533.1373316/1‑94 (MQ=60)
GCATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATGTATATAATAT < SRR4302533.1604701/94‑1 (MQ=60)
|
AAAGAAAAACATAGGTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCACATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATGTATATAATAT > NC_000913/2784736‑2784922
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
