Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,857,436 |
C→T |
A774V (GCG→GTG) |
mutS → |
MutS |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,857,436 | 0 | C | T | 99.5%
| 765.1
/ NA
| 216 | A774V (GCG→GTG) | mutS | MutS |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (109/106); minor base G (1/0); total (110/106) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 225 total aligned reads displayed.
ACGTGCATCTCGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGCGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAACGCCG > NC_000913/2857346‑2857525
|
cATCTCGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCa < 2:75632/93‑1 (MQ=255)
cATCTCGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCa < 2:3382921/93‑1 (MQ=255)
aTCTCGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAg > 2:3249526/1‑93 (MQ=255)
tctcGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGc > 2:4886784/1‑93 (MQ=255)
tctcGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGc > 1:2538115/1‑93 (MQ=255)
tcGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGctc > 2:1717726/1‑93 (MQ=255)
cGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGctct > 2:3180065/1‑93 (MQ=255)
gATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTg < 2:5244359/93‑1 (MQ=255)
aTGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTgg < 2:94787/93‑1 (MQ=255)
aTGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTgg < 1:2048173/93‑1 (MQ=255)
tGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGc < 1:118008/93‑1 (MQ=255)
cACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAg > 1:358902/1‑93 (MQ=255)
aCTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAgg > 1:4827948/1‑93 (MQ=255)
aCTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAgg < 2:797768/93‑1 (MQ=255)
tGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCg < 2:1274317/93‑1 (MQ=255)
ggAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGt < 2:1482795/93‑1 (MQ=255)
ggAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGt < 1:4581552/93‑1 (MQ=255)
ggAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGt < 2:1903009/93‑1 (MQ=255)
ggAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGt < 1:3375187/93‑1 (MQ=255)
gCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGcc < 1:1325507/93‑1 (MQ=255)
aCGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCaa > 2:5764698/1‑93 (MQ=255)
cGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCaaa > 2:282768/1‑93 (MQ=255)
cGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGGTGCAGCTCTGGCAGGCGTGCCaaa > 1:816949/1‑93 (MQ=255)
ggCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCaaaa < 1:4562234/93‑1 (MQ=255)
gCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAag > 2:1582762/1‑93 (MQ=255)
gACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAagag < 1:2317962/93‑1 (MQ=255)
acCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGtt < 1:515500/93‑1 (MQ=255)
cATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGttat > 1:429792/1‑93 (MQ=255)
cATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGttat > 2:1122408/1‑93 (MQ=255)
cATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGttat < 2:3772912/93‑1 (MQ=255)
cATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGttat < 1:3752131/93‑1 (MQ=255)
cATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGttat < 2:234421/93‑1 (MQ=255)
ttGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGttatta < 1:6277436/93‑1 (MQ=255)
ttGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGttatta > 1:4655898/1‑93 (MQ=255)
ttGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGttatta > 2:4617875/1‑93 (MQ=255)
gCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAg < 1:4753361/93‑1 (MQ=255)
ccTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAgg > 2:4537675/1‑92 (MQ=255)
tttATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAgcgc < 1:6140642/93‑1 (MQ=255)
tttATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAgcgc > 1:2715325/1‑93 (MQ=255)
tttATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAgcgc > 1:2324515/1‑93 (MQ=255)
ttATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAgcgcg > 1:3682848/1‑93 (MQ=255)
ttATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAgcgcg < 2:1549227/93‑1 (MQ=255)
ttATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAgcgcg > 2:3544320/1‑93 (MQ=255)
tATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAgcgcgc < 1:2103447/93‑1 (MQ=255)
tATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAgcgcgc > 2:6016553/1‑93 (MQ=255)
gCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACg < 1:4777809/93‑1 (MQ=255)
gCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACg < 1:2795122/93‑1 (MQ=255)
acaGCGTGCAGGATGGCGCGGCGAGCAAAAGGTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAGAAGAGGGTATTAAGCGCGCACGGc > 2:3293265/1‑93 (MQ=255)
acaGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGc < 1:5096663/93‑1 (MQ=255)
acaGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGc > 1:1567724/1‑93 (MQ=255)
acaGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGc > 1:3180300/1‑93 (MQ=255)
caGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCa < 2:535982/93‑1 (MQ=255)
aGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCaa < 1:5280336/93‑1 (MQ=255)
cGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCaaaa < 1:4197529/93‑1 (MQ=255)
ggCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGc < 1:1688197/92‑1 (MQ=255)
gCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCt > 2:3515063/1‑93 (MQ=255)
cAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTg < 2:609431/93‑1 (MQ=255)
cAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGGTGCAGCTCTGGCAGGCGTGCCAAAAAAGGTTATTAAGCGCGCACGGCAAACGCTg > 2:2841361/1‑93 (MQ=255)
aGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGc > 1:3331383/1‑93 (MQ=255)
aGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGc > 2:218012/1‑93 (MQ=255)
ggATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCg < 2:1835048/93‑1 (MQ=255)
ggATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCg > 2:2813103/1‑93 (MQ=255)
ggATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGGTATTAAGCGCGCACGGCAAAAGCTGCg > 1:1388087/1‑93 (MQ=255)
gATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGt > 2:2635143/1‑93 (MQ=255)
ggCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAg > 1:1886041/1‑93 (MQ=255)
cgcgGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCt < 1:5520487/93‑1 (MQ=255)
gcggcgAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTg > 2:5550473/1‑93 (MQ=255)
cggcgAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTgg > 2:1011357/1‑93 (MQ=255)
cgAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGaaa < 2:166313/93‑1 (MQ=255)
cgAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGaaa < 2:3864438/93‑1 (MQ=255)
gAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAg > 2:2728254/1‑93 (MQ=255)
gAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGAACGGCAAAAGCTGCGTGAGCTGGAAAg > 2:493351/1‑93 (MQ=255)
aGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAga > 2:4352129/1‑92 (MQ=255)
gCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCa > 1:6017243/1‑93 (MQ=255)
gCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCa > 1:5714342/1‑93 (MQ=255)
gCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCa < 1:3909096/93‑1 (MQ=255)
cAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCAt > 1:1548633/1‑93 (MQ=255)
cAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCAt < 1:3541308/93‑1 (MQ=255)
aaaaGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCAtt < 1:1015149/93‑1 (MQ=255)
aaaaGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCAtt < 1:4155328/93‑1 (MQ=255)
aaaGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCAttt > 2:5557224/1‑93 (MQ=255)
aaGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTc > 1:3130853/1‑93 (MQ=255)
aGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCg < 2:3977932/93‑1 (MQ=255)
aGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCg > 1:345475/1‑93 (MQ=255)
gCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGTTGCGTGAGCTGGAAAGCATTTCGc < 2:1340481/93‑1 (MQ=255)
gCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGc < 1:404250/93‑1 (MQ=255)
tACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCg < 1:4018411/93‑1 (MQ=255)
tACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCg > 2:924417/1‑93 (MQ=255)
aCGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGa < 1:5705222/93‑1 (MQ=255)
ggCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAAc < 2:4844358/93‑1 (MQ=255)
ggCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAAc < 2:5751929/93‑1 (MQ=255)
ggCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAAc < 2:4083021/93‑1 (MQ=255)
gCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAAcg < 1:4364858/93‑1 (MQ=255)
gCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAAcg < 2:3716626/93‑1 (MQ=255)
gCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAAcg > 1:1217187/1‑93 (MQ=255)
ccTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAAcgc < 2:562445/93‑1 (MQ=255)
cTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAAcgcc > 2:3142035/1‑93 (MQ=255)
cTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAAcgcc > 1:1481475/1‑93 (MQ=255)
cTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAAcgcc > 1:2245507/1‑93 (MQ=255)
tggtggTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAAcgccg < 2:4393663/93‑1 (MQ=255)
|
ACGTGCATCTCGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGCGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAACGCCG > NC_000913/2857346‑2857525
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTAACGTGCATCTCGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGCGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAACGCCGCC > NC_000913/2857343‑2857527
|
CTAACGTGCATCTCGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGT > SRR4302533.5163772/1‑94 (MQ=60)
CTAACGTGCATCTCGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGG > SRR4302533.4166185/1‑94 (MQ=60)
TAACGTGCATCTCGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTG > SRR4302533.579704/1‑94 (MQ=60)
TAACGTGCATCTCGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTG > SRR4302533.579703/1‑94 (MQ=60)
AACGTGCATCTCGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGG > SRR4302533.2111625/1‑94 (MQ=60)
AACGTGCATCTCGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGG < SRR4302533.5901283/94‑1 (MQ=60)
ACGTGCATCTCGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGT > SRR4302533.4409528/1‑94 (MQ=60)
GTGCATCTCGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTG > SRR4302533.3605234/1‑94 (MQ=60)
GTGCATCTCGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTG < SRR4302533.5739858/94‑1 (MQ=60)
GTGCATCTCGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTG > SRR4302533.3747437/1‑94 (MQ=60)
GTGCATCTCGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGGTG > SRR4302533.51932/1‑94 (MQ=60)
GCATCTCGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCA > SRR4302533.1679921/1‑94 (MQ=60)
CATCTCGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAG < SRR4302533.1096368/94‑1 (MQ=60)
ATCTCGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGC > SRR4302533.2553740/1‑94 (MQ=60)
CTCGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTC > SRR4302533.2739220/1‑94 (MQ=60)
ATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGTGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGC > SRR4302533.3054687/1‑94 (MQ=60)
ATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGC < SRR4302533.2060801/94‑1 (MQ=60)
TGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCA > SRR4302533.801560/1‑94 (MQ=60)
TGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCA < SRR4302533.118757/94‑1 (MQ=60)
GCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAG > SRR4302533.361086/1‑94 (MQ=60)
CACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGG > SRR4302533.4857207/1‑94 (MQ=60)
CTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCG < SRR4302533.843704/94‑1 (MQ=60)
TGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGT > SRR4302533.4844814/1‑94 (MQ=60)
TGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGT < SRR4302533.3182326/94‑1 (MQ=60)
GGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTG < SRR4302533.4609313/94‑1 (MQ=60)
GGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTG < SRR4302533.4650514/94‑1 (MQ=60)
GGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTG < SRR4302533.3396033/94‑1 (MQ=60)
GGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTG < SRR4302533.5979199/94‑1 (MQ=60)
GCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCA < SRR4302533.419268/94‑1 (MQ=60)
GCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCA < SRR4302533.1333458/94‑1 (MQ=60)
CACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAA > SRR4302533.1924628/1‑94 (MQ=60)
ACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGGTGCAGCTCTGGCAGGCGTGCCAAA > SRR4302533.821735/1‑94 (MQ=60)
GGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAACG > SRR4302533.6184726/1‑94 (MQ=60)
GGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAG > SRR4302533.4933273/1‑94 (MQ=60)
GGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAG < SRR4302533.4589900/94‑1 (MQ=60)
CGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAG < SRR4302533.3863871/94‑1 (MQ=60)
CGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAG > SRR4302533.3950663/1‑94 (MQ=60)
GACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGG < SRR4302533.2332312/94‑1 (MQ=60)
CACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTT < SRR4302533.3427187/94‑1 (MQ=60)
CACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAAGCGTGCCAAAAGAGGCT > SRR4302533.4775287/1‑94 (MQ=60)
ACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTA < SRR4302533.518559/94‑1 (MQ=60)
CCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTAT > SRR4302533.432356/1‑94 (MQ=60)
CATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATT < SRR4302533.3775134/94‑1 (MQ=60)
CATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATT > SRR4302533.335909/1‑94 (MQ=60)
CATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATT < SRR4302533.4319870/94‑1 (MQ=60)
CATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATT > SRR4302533.5144119/1‑94 (MQ=60)
ATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTA > SRR4302533.4684110/1‑94 (MQ=60)
TTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAA < SRR4302533.6314916/94‑1 (MQ=60)
TTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAA < SRR4302533.4319907/94‑1 (MQ=60)
TGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAG < SRR4302533.5595341/94‑1 (MQ=60)
GCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGC < SRR4302533.4782177/94‑1 (MQ=60)
CCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCG < SRR4302533.5375759/94‑1 (MQ=60)
CTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGC > SRR4302533.2731996/1‑94 (MQ=60)
CTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGC > SRR4302533.2338906/1‑94 (MQ=60)
CTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGC < SRR4302533.4590790/94‑1 (MQ=60)
CTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGC > SRR4302533.408731/1‑94 (MQ=60)
TTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGTAGGCGTGCCAAAAGAGGTTATTAAGCGCG > SRR4302533.4043215/1‑94 (MQ=60)
TTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCG > SRR4302533.3705484/1‑94 (MQ=60)
TTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCG < SRR4302533.6177627/94‑1 (MQ=60)
TTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGC > SRR4302533.2182137/1‑94 (MQ=60)
TATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCA < SRR4302533.2116414/94‑1 (MQ=60)
GCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGG < SRR4302533.1403969/94‑1 (MQ=60)
GCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGG < SRR4302533.2812311/94‑1 (MQ=60)
GCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGG < SRR4302533.4806748/94‑1 (MQ=60)
CACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGC > SRR4302533.1577165/1‑94 (MQ=60)
CACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGC < SRR4302533.4360965/94‑1 (MQ=60)
CACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGC > SRR4302533.4789330/1‑94 (MQ=60)
CACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGC > SRR4302533.3199864/1‑94 (MQ=60)
ACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCA < SRR4302533.5127456/94‑1 (MQ=60)
CAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAA > SRR4302533.1628658/1‑94 (MQ=60)
AGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAA < SRR4302533.5311978/94‑1 (MQ=60)
CGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCTCGGCAAAAG < SRR4302533.1391038/94‑1 (MQ=60)
CGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAG < SRR4302533.4222938/94‑1 (MQ=60)
CGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAG < SRR4302533.3564480/94‑1 (MQ=60)
GTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGC > SRR4302533.1324825/1‑94 (MQ=60)
TGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCT < SRR4302533.1192147/94‑1 (MQ=60)
GGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCT < SRR4302533.1698428/94‑1 (MQ=60)
CAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGC > SRR4302533.3351974/1‑94 (MQ=60)
AGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGGTATTAAGCGCGCACGGCAAAAGCTGCG > SRR4302533.1396445/1‑94 (MQ=60)
GGATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCACAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGT > SRR4302533.3693839/1‑94 (MQ=60)
GATGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTG < SRR4302533.1356831/94‑1 (MQ=60)
TGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAG < SRR4302533.6148449/94‑1 (MQ=60)
TGGCGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAG > SRR4302533.1897561/1‑94 (MQ=60)
CGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTG < SRR4302533.2145605/94‑1 (MQ=60)
CGCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTG < SRR4302533.5553818/94‑1 (MQ=60)
GCGGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGG < SRR4302533.618481/94‑1 (MQ=60)
GGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAA < SRR4302533.1491382/94‑1 (MQ=60)
GGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAA > SRR4302533.1751097/1‑94 (MQ=60)
GGCGAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGAGCGCACGGCAAAAGCTGCGTGAGCTGGAA > SRR4302533.3978482/1‑94 (MQ=60)
GAGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGC > SRR4302533.2332657/1‑94 (MQ=60)
AGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCA > SRR4302533.6053702/1‑94 (MQ=60)
AGCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCA > SRR4302533.5748855/1‑94 (MQ=60)
GCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCAT < SRR4302533.3932972/94‑1 (MQ=60)
GCAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCAT > SRR4302533.1557965/1‑94 (MQ=60)
CAAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATT < SRR4302533.3563129/94‑1 (MQ=60)
AAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTT < SRR4302533.1021110/94‑1 (MQ=60)
AAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTT < SRR4302533.2278935/94‑1 (MQ=60)
AAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTT < SRR4302533.2575786/94‑1 (MQ=60)
AAAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTT < SRR4302533.4180507/94‑1 (MQ=60)
AAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTC > SRR4302533.3496572/1‑94 (MQ=60)
AAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTC < SRR4302533.4976746/94‑1 (MQ=60)
AAAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTC > SRR4302533.3150104/1‑94 (MQ=60)
AAGCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCG > SRR4302533.347587/1‑94 (MQ=60)
GCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCC < SRR4302533.406685/94‑1 (MQ=60)
GCTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCC > SRR4302533.5690340/1‑94 (MQ=60)
CTACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCG > SRR4302533.2397130/1‑94 (MQ=60)
TACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGA < SRR4302533.4042879/94‑1 (MQ=60)
TACGGCCTGGGGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGA > SRR4302533.4615028/1‑94 (MQ=60)
ACGGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAA < SRR4302533.5739683/94‑1 (MQ=60)
GGCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAACG > SRR4302533.1224496/1‑94 (MQ=60)
GCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAACGC > SRR4302533.2728908/1‑94 (MQ=60)
GCCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAACGC < SRR4302533.4391209/94‑1 (MQ=60)
CCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAACGCC > SRR4302533.2259383/1‑94 (MQ=60)
CCTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAACGCC > SRR4302533.1490419/1‑94 (MQ=60)
CTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAACGCCG < SRR4302533.1573797/94‑1 (MQ=60)
CTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAACGCCG > SRR4302533.3282512/1‑94 (MQ=60)
CTGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAACGCCG < SRR4302533.3312734/94‑1 (MQ=60)
TGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAACGCCGC > SRR4302533.3694276/1‑94 (MQ=60)
TGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAACGCCGC > SRR4302533.3370307/1‑94 (MQ=60)
TGGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAACGCCGC > SRR4302533.5297678/1‑94 (MQ=60)
GGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAACGCCGCC > SRR4302533.322886/1‑94 (MQ=60)
GGTGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAACGCCGCC < SRR4302533.810885/94‑1 (MQ=60)
|
CTAACGTGCATCTCGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGCGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAACGCCGCC > NC_000913/2857343‑2857527
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
