Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
RA |
NC_000913 |
3,965,229 |
A→G |
I400V (ATT→GTT) |
rho → |
transcription termination factor Rho |
|
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
* | NC_000913 | 3,965,229 | 0 | A | G | 100.0%
| 882.0
/ NA
| 269 | I400V (ATT→GTT) | rho | transcription termination factor Rho |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (153/116); total (153/116) |
Only 100 of 270 total aligned reads displayed.
CTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGT > NC_000913/3965139‑3965318
|
ctgctCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGtt > 2:6262341/1‑93 (MQ=255)
tgctCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCAGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTta > 1:4553997/1‑93 (MQ=255)
tCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTtaata < 2:1878483/93‑1 (MQ=255)
tCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTtaata < 1:539737/93‑1 (MQ=255)
tCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTtaata < 1:3355697/93‑1 (MQ=255)
cGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAAc > 2:2403562/1‑93 (MQ=255)
gACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACt > 1:4477907/1‑93 (MQ=255)
gACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACt < 2:5552141/93‑1 (MQ=255)
cTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTgg > 1:3092566/1‑93 (MQ=255)
tCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGc > 1:887286/1‑93 (MQ=255)
cAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCa > 2:4205916/1‑93 (MQ=255)
aGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCaa > 2:3871245/1‑93 (MQ=255)
aGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCaa > 1:2160247/1‑93 (MQ=255)
ggAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGTTGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAAt > 2:5075542/1‑93 (MQ=255)
ggAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAAt < 1:1013071/93‑1 (MQ=255)
ggAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAAt > 2:3584806/1‑93 (MQ=255)
ggAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAAt > 1:1945838/1‑93 (MQ=255)
agaaCTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATgac > 1:2780118/1‑93 (MQ=255)
agaaCTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATgac > 2:4385330/1‑93 (MQ=255)
gaaCTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATgacc < 2:2792910/93‑1 (MQ=255)
gaaCTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATgacc > 2:2927641/1‑93 (MQ=255)
aCTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATgaccaa < 1:2697800/93‑1 (MQ=255)
tGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATgaccaaga > 2:1813577/1‑93 (MQ=255)
gAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATgaccaagaccaa > 1:1851973/1‑93 (MQ=255)
aaaaTGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAAt < 2:5104428/93‑1 (MQ=255)
aaaaTGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAAt > 2:1747422/1‑93 (MQ=255)
aaaaTGTGGATCCTGCGCAAAATAATTCACCCGATGGGCGAAATCGATGCAATGAAATTCCTCGTTAATAAACTGGCAATgacaaagaccaag > 1:4193156/1‑92 (MQ=255)
aaaTGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATg > 2:1471041/1‑93 (MQ=255)
aaaTGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATg < 1:3546246/93‑1 (MQ=255)
aaaTGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATg < 2:1276892/93‑1 (MQ=255)
aaTGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGa < 1:3779779/93‑1 (MQ=255)
aaTGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGa > 1:2407531/1‑93 (MQ=255)
aTGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGAc < 2:4356650/93‑1 (MQ=255)
gtgGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGa < 1:6295467/93‑1 (MQ=255)
gtgGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGa < 2:1646331/93‑1 (MQ=255)
tgGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGAt > 1:6106601/1‑93 (MQ=255)
ggATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATTGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGAtt > 2:1830765/1‑93 (MQ=255)
ggATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGAtt < 2:351283/93‑1 (MQ=255)
ccTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATttctt > 2:249042/1‑93 (MQ=255)
ccTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATttctt > 2:1364169/1‑93 (MQ=255)
tGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCg < 2:5826480/93‑1 (MQ=255)
gcgcAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGa > 1:5592106/1‑93 (MQ=255)
gcgcAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGa > 2:4563066/1‑93 (MQ=255)
cgcAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGaa < 1:2335839/93‑1 (MQ=255)
gcAAAATCATTCGCCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGaaa < 1:4004421/93‑1 (MQ=255)
gcAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGaca < 2:6209138/93‑3 (MQ=255)
cAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAat < 1:505848/93‑1 (MQ=255)
aaaaTCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAatg < 2:4070594/93‑1 (MQ=255)
aaaaTCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAatg > 1:3161757/1‑93 (MQ=255)
aaaaTCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAatg > 2:3763841/1‑93 (MQ=255)
aaaTCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAatga < 2:2233818/93‑1 (MQ=255)
aaaTCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAatga > 1:4232306/1‑93 (MQ=255)
aaTCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCATTGACGATTTCTTCGAAatgat < 2:4007121/93‑1 (MQ=255)
cATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGaa > 2:5711724/1‑93 (MQ=255)
cATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGaa < 1:2366807/93‑1 (MQ=255)
cATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGaa < 2:5157321/93‑1 (MQ=255)
cATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGaa > 1:5546499/1‑93 (MQ=255)
aTTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGaaa < 1:2241769/93‑1 (MQ=255)
aTTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGaaa < 1:5243968/93‑1 (MQ=255)
ttCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAAc > 2:2859076/1‑93 (MQ=255)
ttCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAAc < 1:5178735/93‑1 (MQ=255)
ttCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAAc > 2:6163351/1‑93 (MQ=255)
ttCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAAc < 1:1691713/93‑1 (MQ=255)
aCCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCt > 2:4826258/1‑93 (MQ=255)
aCCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCt > 1:2979912/1‑93 (MQ=255)
cccGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTc > 1:1331304/1‑93 (MQ=255)
cccGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTc > 2:3213383/1‑93 (MQ=255)
ccGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCa > 2:2697200/1‑93 (MQ=255)
cGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCAt > 2:4442113/1‑93 (MQ=255)
cGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCAt > 2:1132923/1‑93 (MQ=255)
cGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCAt > 2:5620201/1‑93 (MQ=255)
gATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATa > 2:3130866/1‑93 (MQ=255)
gATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATa > 2:3255723/1‑93 (MQ=255)
aTGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATaa > 1:1165419/1‑93 (MQ=255)
tGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATaaa < 2:5394991/93‑1 (MQ=255)
tGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATaaa > 1:983971/1‑93 (MQ=255)
gCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAAttt < 1:1121903/93‑1 (MQ=255)
aaaTCGATGCAATGGGATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTc > 2:5990770/1‑93 (MQ=255)
aaaTCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTc < 1:718016/93‑1 (MQ=255)
aaTCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCt > 2:4479355/1‑93 (MQ=255)
aTCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCtt < 2:693526/93‑1 (MQ=255)
cGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTAt > 1:1415071/1‑93 (MQ=255)
gATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATg < 1:4646512/93‑1 (MQ=255)
aTGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGc > 2:1952125/1‑93 (MQ=255)
aTGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGc > 1:482307/1‑93 (MQ=255)
tGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGcc > 1:3676666/1‑93 (MQ=255)
gCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCa < 1:5438722/93‑1 (MQ=255)
cAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCaa > 1:2799498/1‑93 (MQ=255)
aaTGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCaaa < 1:1369599/93‑1 (MQ=255)
aTGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCaaaa > 2:3009757/1‑93 (MQ=255)
aTGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCaaaa < 2:5854971/93‑1 (MQ=255)
tGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCaaaaa > 2:4610322/1‑93 (MQ=255)
ggAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAAc > 1:5779901/1‑93 (MQ=255)
ggAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAAc > 1:3541468/1‑93 (MQ=255)
gAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACg > 2:2009217/1‑93 (MQ=255)
aTTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGcc > 1:4713243/1‑93 (MQ=255)
aTTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGcc < 1:3260884/93‑1 (MQ=255)
ttCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCa < 2:3038431/93‑1 (MQ=255)
tCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCAc < 2:3439541/93‑1 (MQ=255)
cTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACgt > 1:1519134/1‑93 (MQ=255)
|
CTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGT > NC_000913/3965139‑3965318
|
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTT > NC_000913/3965136‑3965322
|
GAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCG < SRR4302533.4516023/94‑1 (MQ=60)
GAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCG < SRR4302533.1513312/94‑1 (MQ=60)
AGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGT < SRR4302533.3653496/94‑1 (MQ=60)
AGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGT > SRR4302533.2213305/1‑94 (MQ=60)
GCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTT < SRR4302533.4427808/94‑1 (MQ=60)
CTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTA > SRR4302533.4243264/1‑94 (MQ=60)
CTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCAGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTA > SRR4302533.4581616/1‑94 (MQ=60)
TGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAA > SRR4302533.694052/1‑94 (MQ=60)
CTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATA > SRR4302533.374941/1‑94 (MQ=60)
TCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAA < SRR4302533.3376432/94‑1 (MQ=60)
TCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAA < SRR4302533.542946/94‑1 (MQ=60)
TCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAA < SRR4302533.6319127/94‑1 (MQ=60)
TCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAA < SRR4302533.1408994/94‑1 (MQ=60)
CACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAA < SRR4302533.2750114/94‑1 (MQ=60)
CGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACT > SRR4302533.4505002/1‑94 (MQ=60)
GACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTG > SRR4302533.5537514/1‑94 (MQ=60)
ACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGG < SRR4302533.2739460/94‑1 (MQ=60)
ACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGG > SRR4302533.3111580/1‑94 (MQ=60)
CTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGC > SRR4302533.892494/1‑94 (MQ=60)
CTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGC < SRR4302533.1934582/94‑1 (MQ=60)
CAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAA > SRR4302533.2173545/1‑94 (MQ=60)
AGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAAT > SRR4302533.1957702/1‑94 (MQ=60)
GGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATG < SRR4302533.1019002/94‑1 (MQ=60)
AAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGAC < SRR4302533.2322073/94‑1 (MQ=60)
AAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGAC > SRR4302533.2797195/1‑94 (MQ=60)
AAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGAC > SRR4302533.1910029/1‑94 (MQ=60)
AGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACC < SRR4302533.4611120/94‑1 (MQ=60)
ACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAG > SRR4302533.858606/1‑94 (MQ=60)
ACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAG < SRR4302533.2714332/94‑1 (MQ=60)
CTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGA < SRR4302533.5768355/94‑1 (MQ=60)
CTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGA > SRR4302533.5435860/1‑94 (MQ=60)
CTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGA > SRR4302533.3298071/1‑94 (MQ=60)
TGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGAC < SRR4302533.1478104/94‑1 (MQ=60)
GCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACC > SRR4302533.5691995/1‑94 (MQ=60)
AGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAA > SRR4302533.1144988/1‑94 (MQ=60)
AGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAA > SRR4302533.3100381/1‑94 (MQ=60)
AGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAA > SRR4302533.1863265/1‑94 (MQ=60)
GAAAATGTGGATCCTGCGCAAAATAATTCACCCGATGGGCGAAATCGATGCAATGAAATTCCTCGTTAATAAACTGGCAATGACAAAGACCAAG > SRR4302533.4218534/1‑94 (MQ=60)
AAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGA < SRR4302533.3568104/94‑1 (MQ=60)
AAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGA > SRR4302533.2422401/1‑94 (MQ=60)
AATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGAC < SRR4302533.3802934/94‑1 (MQ=60)
TGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGA < SRR4302533.5202259/94‑1 (MQ=60)
GTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGAT < SRR4302533.6333010/94‑1 (MQ=60)
GTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGAT > SRR4302533.6143472/1‑94 (MQ=60)
TGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATT > SRR4302533.4085430/1‑94 (MQ=60)
TCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTT > SRR4302533.516563/1‑94 (MQ=60)
CTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCG < SRR4302533.407969/94‑1 (MQ=60)
CTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCG < SRR4302533.2358734/94‑1 (MQ=60)
CTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCG < SRR4302533.5495823/94‑1 (MQ=60)
CTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCG > SRR4302533.4713382/1‑94 (MQ=60)
CTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACAAAGACCAATGACGATTTCTTCG > SRR4302533.1435324/1‑94 (MQ=60)
TGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGA > SRR4302533.5625887/1‑94 (MQ=60)
TGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGA > SRR4302533.1819206/1‑94 (MQ=60)
CGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAA < SRR4302533.2350297/94‑1 (MQ=60)
GCAAAATCATTCGCCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAAT < SRR4302533.4028799/94‑1 (MQ=60)
CAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATG < SRR4302533.508851/94‑1 (MQ=60)
CAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATG < SRR4302533.6056017/94‑1 (MQ=60)
CAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATG > SRR4302533.3181215/1‑94 (MQ=60)
AAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGA > SRR4302533.4257887/1‑94 (MQ=60)
AAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGAT > SRR4302533.3765528/1‑94 (MQ=60)
AAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGAT > SRR4302533.3623594/1‑94 (MQ=60)
AAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGAT < SRR4302533.3975907/94‑1 (MQ=60)
AAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTAGAAATGAT > SRR4302533.3603743/1‑94 (MQ=60)
ATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGA > SRR4302533.4045735/1‑94 (MQ=60)
ATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGA > SRR4302533.2325450/1‑94 (MQ=60)
ATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGA > SRR4302533.1612178/1‑94 (MQ=60)
TCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAA > SRR4302533.5579998/1‑94 (MQ=60)
TCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAA < SRR4302533.769892/94‑1 (MQ=60)
CATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAA < SRR4302533.2381447/94‑1 (MQ=60)
ATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAAC < SRR4302533.5275487/94‑1 (MQ=60)
ATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAAC < SRR4302533.2255625/94‑1 (MQ=60)
ATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAAC < SRR4302533.721471/94‑1 (MQ=60)
TTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACG < SRR4302533.5210011/94‑1 (MQ=60)
TTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACG < SRR4302533.3436332/94‑1 (MQ=60)
TTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACG < SRR4302533.1701958/94‑1 (MQ=60)
TCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGC > SRR4302533.1362727/1‑94 (MQ=60)
TCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGC < SRR4302533.312991/94‑1 (MQ=60)
TCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGC > SRR4302533.558597/1‑94 (MQ=60)
CACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCT > SRR4302533.2998146/1‑94 (MQ=60)
ACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTC > SRR4302533.1339290/1‑94 (MQ=60)
CCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCA > SRR4302533.4715626/1‑94 (MQ=60)
CCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCA > SRR4302533.2458461/1‑94 (MQ=60)
CCGATGGGCGAAATCTATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCAT < SRR4302533.2994372/94‑1 (MQ=60)
CCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCAT < SRR4302533.344972/94‑1 (MQ=60)
CCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCAT > SRR4302533.1146738/1‑94 (MQ=60)
CGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATA > SRR4302533.1201171/1‑94 (MQ=60)
CGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATA > SRR4302533.3280922/1‑94 (MQ=60)
CGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATA > SRR4302533.3014679/1‑94 (MQ=60)
CGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATA > SRR4302533.2107721/1‑94 (MQ=60)
GATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAA > SRR4302533.1172407/1‑94 (MQ=60)
GATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAA < SRR4302533.2374037/94‑1 (MQ=60)
ATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAA > SRR4302533.989739/1‑94 (MQ=60)
TGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAAT < SRR4302533.1398787/94‑1 (MQ=60)
GGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGATACGCTCATAAATT > SRR4302533.3563393/1‑94 (MQ=60)
GGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATT < SRR4302533.2386373/94‑1 (MQ=60)
GGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTT < SRR4302533.5459232/94‑1 (MQ=60)
GCGAAATCGATGTAATGGAATTCCTCGTTAATAAACTGCCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTG < SRR4302533.4503403/94‑1 (MQ=60)
GCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTG < SRR4302533.1128563/94‑1 (MQ=60)
CGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGT > SRR4302533.103727/1‑94 (MQ=60)
CGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGT > SRR4302533.4933645/1‑94 (MQ=60)
AAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCT < SRR4302533.722254/94‑1 (MQ=60)
ATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTA < SRR4302533.4653728/94‑1 (MQ=60)
TCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTAT > SRR4302533.1423632/1‑94 (MQ=60)
TCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTAT < SRR4302533.5286149/94‑1 (MQ=60)
CGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATG > SRR4302533.2237990/1‑94 (MQ=60)
CGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATG > SRR4302533.4408415/1‑94 (MQ=60)
CGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATG > SRR4302533.2511959/1‑94 (MQ=60)
CGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATG > SRR4302533.2812068/1‑94 (MQ=60)
GATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGC < SRR4302533.4674670/94‑1 (MQ=60)
GATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGC > SRR4302533.485189/1‑94 (MQ=60)
GATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGC < SRR4302533.334933/94‑1 (MQ=60)
ATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCC > SRR4302533.3699262/1‑94 (MQ=60)
GCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAA < SRR4302533.5471478/94‑1 (MQ=60)
GCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAA > SRR4302533.2816717/1‑94 (MQ=60)
GCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAA < SRR4302533.1703742/94‑1 (MQ=60)
CAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAA < SRR4302533.4575832/94‑1 (MQ=60)
AATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAA < SRR4302533.1377830/94‑1 (MQ=60)
AATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAA > SRR4302533.3119620/1‑94 (MQ=60)
ATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAA > SRR4302533.2969636/1‑94 (MQ=60)
TGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAAC > SRR4302533.5814809/1‑94 (MQ=60)
TGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAAC > SRR4302533.3563289/1‑94 (MQ=60)
GGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACG < SRR4302533.5313786/94‑1 (MQ=60)
GAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGC > SRR4302533.1992865/1‑94 (MQ=60)
AATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCC > SRR4302533.4741807/1‑94 (MQ=60)
ATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCA < SRR4302533.3280999/94‑1 (MQ=60)
ATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCA < SRR4302533.4820592/94‑1 (MQ=60)
TTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCAC < SRR4302533.912620/94‑1 (MQ=60)
TTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCAC < SRR4302533.5952855/94‑1 (MQ=60)
TTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCAC < SRR4302533.5227750/94‑1 (MQ=60)
TTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCAC < SRR4302533.1214278/94‑1 (MQ=60)
TCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACG < SRR4302533.4235645/94‑1 (MQ=60)
CCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGT > SRR4302533.1528278/1‑94 (MQ=60)
CTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTG < SRR4302533.4922153/94‑1 (MQ=60)
CGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTT < SRR4302533.1381392/94‑1 (MQ=60)
CGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTT > SRR4302533.337030/1‑94 (MQ=60)
CGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTT < SRR4302533.356639/94‑1 (MQ=60)
CGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTT > SRR4302533.5992100/1‑94 (MQ=60)
CGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTT < SRR4302533.2807002/94‑1 (MQ=60)
CGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGGT > SRR4302533.1784665/1‑94 (MQ=60)
GTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGCAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTT > SRR4302533.4467122/1‑94 (MQ=60)
GTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTT < SRR4302533.6239428/94‑1 (MQ=60)
GTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTT < SRR4302533.3445711/94‑1 (MQ=60)
GTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTT < SRR4302533.1329318/94‑1 (MQ=60)
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GAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTT > NC_000913/3965136‑3965322
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Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |