Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,011,749 |
A→G |
A369A (GCA→GCG) |
metE → |
tetrahydropteroyltriglutamate methyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,011,749 | 0 | A | G | 99.6%
| 817.2
/ NA
| 257 | A369A (GCA→GCG) | metE | tetrahydropteroyltriglutamate methyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (131/125); minor base C (1/0); total (132/125) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 268 total aligned reads displayed.
TGCAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCAGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTGGCGGCGAT > NC_000913/4011659‑4011838
|
tGCAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACggcggc < 2:4489458/93‑1 (MQ=255)
cAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGctc > 1:789020/1‑93 (MQ=255)
aGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGctct < 1:6112120/93‑1 (MQ=255)
aGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGctct > 1:3061727/1‑93 (MQ=255)
gAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTg > 1:3324129/1‑93 (MQ=255)
gAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTg > 1:3980604/1‑93 (MQ=255)
gAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCaga < 2:1763350/93‑1 (MQ=255)
aaaaGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCagag > 1:4884726/1‑93 (MQ=255)
aaaGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGt < 1:5717068/93‑1 (MQ=255)
aaaGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGt > 1:4957727/1‑93 (MQ=255)
aaGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTg < 1:2250297/93‑1 (MQ=255)
aGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTgg < 2:1286670/93‑1 (MQ=255)
aGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTgg > 1:5606562/1‑93 (MQ=255)
aGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTAGTGACACGGCGGCTCTGGCAGAGTgg > 2:5093969/1‑93 (MQ=255)
gCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGa > 1:1576235/1‑93 (MQ=255)
gCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGa < 1:4658244/93‑1 (MQ=255)
gCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGa < 2:3985918/93‑1 (MQ=255)
tGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAgc > 1:5886137/1‑93 (MQ=255)
tGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAgc > 2:3923597/1‑93 (MQ=255)
ggTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGATCAGTGGTGACACGGCGGCTCTGGCAGAGAGGAgcg > 2:1842146/1‑93 (MQ=255)
gTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAgcgc > 2:5158768/1‑93 (MQ=255)
ttGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGccc < 2:3663244/93‑1 (MQ=255)
tGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGcccc > 1:2657260/1‑93 (MQ=255)
tGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGcccc < 2:2993586/93‑1 (MQ=255)
tGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGcccc > 2:4813598/1‑93 (MQ=255)
tGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGcccc < 2:2831838/93‑1 (MQ=255)
ttCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCGCGAtt > 1:3808276/1‑93 (MQ=255)
ttCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGAtt > 1:315315/1‑93 (MQ=255)
ttCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGAtt > 2:4136853/1‑93 (MQ=255)
ttCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGAtt > 2:1931008/1‑93 (MQ=255)
tCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTc < 2:768094/93‑1 (MQ=255)
cGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCa < 2:2300935/93‑1 (MQ=255)
gCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGCTGCGCTGAACAGTTGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAg < 2:6098536/93‑1 (MQ=255)
gCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAg < 1:1374571/93‑1 (MQ=255)
gCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAg > 2:5569222/1‑93 (MQ=255)
gCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAg > 1:2429112/1‑93 (MQ=255)
cccTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAgg > 1:2468972/1‑93 (MQ=255)
ccTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGc < 1:1236682/93‑1 (MQ=255)
ccTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGc < 2:2277662/93‑1 (MQ=255)
cTACAAAAATGCCATGAACTGTCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCa < 2:4766841/93‑1 (MQ=255)
cTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCa > 2:4763393/1‑93 (MQ=255)
cTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCa > 1:5492146/1‑93 (MQ=255)
tACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCAc < 1:5684174/93‑1 (MQ=255)
tACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCAc > 1:1030146/1‑93 (MQ=255)
aaaaaTGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCAcgtc < 2:2031167/93‑1 (MQ=255)
aaaaTGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGCGCGCCCCGATTCAGGCAcgtcg > 2:1893916/1‑93 (MQ=255)
aaaaTGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCAcgtcg > 1:3584008/1‑93 (MQ=255)
aaaaTGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCAcgtcg > 1:6221107/1‑93 (MQ=255)
aaaTGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCAcgtcgt > 2:4060737/1‑93 (MQ=255)
aaTGCCATGAGCTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACgtcgtc < 1:4322069/93‑1 (MQ=255)
aaTGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACgtcgtc < 2:2544386/93‑1 (MQ=255)
gCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCAct > 2:3507987/1‑93 (MQ=255)
cATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCActct > 1:4565923/1‑93 (MQ=255)
cATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCActct < 2:5324433/93‑1 (MQ=255)
cATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCActct < 2:6291750/93‑1 (MQ=255)
aTGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTa < 1:1937219/93‑1 (MQ=255)
aTGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTa > 1:1722243/1‑93 (MQ=255)
tGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTAc > 1:851513/1‑93 (MQ=255)
tGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTAc > 2:5593746/1‑93 (MQ=255)
cTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCGGATTCAGGCACGTCGTCACTCTACCcgc < 1:1091479/93‑1 (MQ=255)
cTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCcgc < 2:1409129/93‑1 (MQ=255)
tGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCcgcg < 2:2472410/93‑1 (MQ=255)
tGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCcgcg > 2:2197485/1‑93 (MQ=255)
tGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCcgcg > 1:2554280/1‑93 (MQ=255)
ggCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGGCACTCTACCCGCGt > 2:1001146/1‑93 (MQ=255)
gCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTa < 1:1655938/93‑1 (MQ=255)
cACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTAc < 1:2088244/93‑1 (MQ=255)
aCTGCTGCGGGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACa < 2:1876529/93‑1 (MQ=255)
aCTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGGACGTCGTCACTCTACCCGCGGACa > 2:85531/1‑93 (MQ=255)
aCTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACa > 1:2390681/1‑93 (MQ=255)
aCTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACa < 2:4073222/93‑1 (MQ=255)
ctgctgCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACAt < 2:294145/93‑1 (MQ=255)
gctgcGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATaa < 2:1343584/93‑1 (MQ=255)
ctgcGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAAt < 2:4410235/93‑1 (MQ=255)
ctgcGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAAt < 1:1449859/93‑1 (MQ=255)
ctgcGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAAt > 1:904526/1‑93 (MQ=255)
tgcGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATc < 2:421432/93‑1 (MQ=255)
gcgcGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATcc < 2:2113663/93‑1 (MQ=255)
gcgcGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATcc > 1:4823802/1‑93 (MQ=255)
cgcgATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCcg < 2:3365840/93‑1 (MQ=255)
gcgATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCcgg < 2:4452109/93‑1 (MQ=255)
gATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCcggcg < 2:5092024/93‑1 (MQ=255)
gATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCcggcg > 1:4503907/1‑93 (MQ=255)
tGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGt > 1:4055587/1‑93 (MQ=255)
cgcTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAg > 2:5141110/1‑93 (MQ=255)
cTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGaa < 2:3789462/93‑1 (MQ=255)
tGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGaaa > 1:4423714/1‑93 (MQ=255)
gAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGGAGaaaa > 1:54138/1‑93 (MQ=255)
aaCAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAg > 2:2144470/1‑93 (MQ=255)
aaCAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAg < 2:925683/93‑1 (MQ=255)
aCAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGc < 2:3315506/93‑1 (MQ=255)
aCAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGc < 2:3864877/93‑1 (MQ=255)
aGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGt < 1:5370977/93‑1 (MQ=255)
gtggtgACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTc < 1:2900629/93‑1 (MQ=255)
gtggtgACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTc < 2:5265719/93‑1 (MQ=255)
gtggtgACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTc < 1:2681630/93‑1 (MQ=255)
gtggtgACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTc < 2:2734068/93‑1 (MQ=255)
gACACGGCGGCTCTGGGAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTggcg < 2:3302468/93‑1 (MQ=255)
acGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTggcggca > 2:2622586/1‑92 (MQ=255)
ggcggcTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTGGGGGCGAt > 2:1511141/1‑93 (MQ=255)
|
TGCAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCAGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTGGCGGCGAT > NC_000913/4011659‑4011838
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GATGCAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCAGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTGGCGGCGATCAC > NC_000913/4011657‑4011841
|
GATGCAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGG > SRR4302533.2597621/1‑94 (MQ=60)
ATGCAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGC > SRR4302533.5442100/1‑94 (MQ=60)
GCAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTC > SRR4302533.793663/1‑94 (MQ=60)
CAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCT > SRR4302533.3080519/1‑94 (MQ=60)
AGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTG < SRR4302533.6149011/94‑1 (MQ=60)
AGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTG > SRR4302533.3342758/1‑94 (MQ=60)
AGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTG > SRR4302533.3344661/1‑94 (MQ=60)
AGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTG > SRR4302533.761426/1‑94 (MQ=60)
AGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTG > SRR4302533.4004840/1‑94 (MQ=60)
GAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGG > SRR4302533.3540326/1‑94 (MQ=60)
AGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCA < SRR4302533.2879134/94‑1 (MQ=60)
GTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAG > SRR4302533.2924771/1‑94 (MQ=60)
GAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAG > SRR4302533.4914320/1‑94 (MQ=60)
AAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGT > SRR4302533.4987762/1‑94 (MQ=60)
AAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTG < SRR4302533.5751596/94‑1 (MQ=60)
AAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGG > SRR4302533.4520400/1‑94 (MQ=60)
AAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGG > SRR4302533.5640440/1‑94 (MQ=60)
AAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGG < SRR4302533.2264205/94‑1 (MQ=60)
AGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGGGGGGA > SRR4302533.1978235/1‑94 (MQ=60)
AGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGA > SRR4302533.1585724/1‑94 (MQ=60)
AGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGA > SRR4302533.4170665/1‑94 (MQ=60)
GCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAG < SRR4302533.4444921/94‑1 (MQ=60)
GCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAG < SRR4302533.4686473/94‑1 (MQ=60)
GCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAG < SRR4302533.5076680/94‑1 (MQ=60)
CTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGC > SRR4302533.2918628/1‑94 (MQ=60)
CTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGC > SRR4302533.5921702/1‑94 (MQ=60)
GTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCC < SRR4302533.1537682/94‑1 (MQ=60)
TTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCC < SRR4302533.99593/94‑1 (MQ=60)
TTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCC > SRR4302533.2673586/1‑94 (MQ=60)
TTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCC > SRR4302533.1437867/1‑94 (MQ=60)
TGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCG < SRR4302533.324743/94‑1 (MQ=60)
TGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCG > SRR4302533.671458/1‑94 (MQ=60)
CCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGAT > SRR4302533.2802178/1‑94 (MQ=60)
CTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCGCGATT > SRR4302533.3831572/1‑94 (MQ=60)
CTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATT > SRR4302533.317238/1‑94 (MQ=60)
TCGCCCTACAAAAATTCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTCGTGACACGGCGGCTCTGGCAGAGTGGAGCCCCCCGATTCA < SRR4302533.524311/94‑1 (MQ=60)
CGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAG > SRR4302533.1694007/1‑94 (MQ=60)
CGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAG > SRR4302533.5536102/1‑94 (MQ=60)
CGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAG > SRR4302533.6003521/1‑94 (MQ=60)
CGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAG > SRR4302533.2444129/1‑94 (MQ=60)
GCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGG < SRR4302533.1382839/94‑1 (MQ=60)
GCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGG > SRR4302533.4570608/1‑94 (MQ=60)
GCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGG > SRR4302533.2484201/1‑94 (MQ=60)
CCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGG < SRR4302533.467624/94‑1 (MQ=60)
CCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGC > SRR4302533.310446/1‑94 (MQ=60)
CCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCA > SRR4302533.2639788/1‑94 (MQ=60)
CCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCA > SRR4302533.5525274/1‑94 (MQ=60)
CCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCA < SRR4302533.1244072/94‑1 (MQ=60)
CTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCAC > SRR4302533.5329941/1‑94 (MQ=60)
CTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCAC > SRR4302533.1473100/1‑94 (MQ=60)
CTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCAC < SRR4302533.5464978/94‑1 (MQ=60)
CTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCAC > SRR4302533.1593966/1‑94 (MQ=60)
CTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCAC > SRR4302533.1036201/1‑94 (MQ=60)
TACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCCGAGAGGAGCGCCCCGATTCAGGCACG > SRR4302533.342856/1‑94 (MQ=60)
TACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACG < SRR4302533.5718509/94‑1 (MQ=60)
CAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTC > SRR4302533.4018008/1‑94 (MQ=60)
AAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCG > SRR4302533.3606080/1‑94 (MQ=60)
AAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCG > SRR4302533.6258398/1‑94 (MQ=60)
AATGCCATGAGCTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCA < SRR4302533.4348099/94‑1 (MQ=60)
ATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCAC < SRR4302533.4556313/94‑1 (MQ=60)
TGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACT < SRR4302533.4043491/94‑1 (MQ=60)
GCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTC < SRR4302533.4507020/94‑1 (MQ=60)
GCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTC > SRR4302533.5805163/1‑94 (MQ=60)
GCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTC > SRR4302533.5642697/1‑94 (MQ=60)
CCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCT > SRR4302533.4593607/1‑94 (MQ=60)
CCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCT < SRR4302533.1788916/94‑1 (MQ=60)
CATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTA > SRR4302533.1732687/1‑94 (MQ=60)
ATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTAC < SRR4302533.1949033/94‑1 (MQ=60)
ATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTAC > SRR4302533.5735372/1‑94 (MQ=60)
ATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTAC > SRR4302533.856497/1‑94 (MQ=60)
TGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACC > SRR4302533.1289071/1‑94 (MQ=60)
AACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCG < SRR4302533.2420715/94‑1 (MQ=60)
AACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCG < SRR4302533.2555839/94‑1 (MQ=60)
ACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGC < SRR4302533.961469/94‑1 (MQ=60)
ACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCCGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGC > SRR4302533.4201964/1‑94 (MQ=60)
CTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCGGATTCAGGCACGTCGTCACTCTACCCGCG < SRR4302533.1097930/94‑1 (MQ=60)
CTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCG > SRR4302533.2569995/1‑94 (MQ=60)
GCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTAC < SRR4302533.1665961/94‑1 (MQ=60)
CACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACA < SRR4302533.2101103/94‑1 (MQ=60)
CACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACA < SRR4302533.5430277/94‑1 (MQ=60)
CACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACA > SRR4302533.2405443/1‑94 (MQ=60)
TGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAA > SRR4302533.3633065/1‑94 (MQ=60)
TGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGGGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAT > SRR4302533.1048299/1‑94 (MQ=60)
GCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAAT > SRR4302533.909829/1‑94 (MQ=60)
CTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATC < SRR4302533.1458608/94‑1 (MQ=60)
TGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCC > SRR4302533.4853023/1‑94 (MQ=60)
GCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCG < SRR4302533.1912829/94‑1 (MQ=60)
GCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCG < SRR4302533.2170917/94‑1 (MQ=60)
GCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCG < SRR4302533.883320/94‑1 (MQ=60)
CGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCG > SRR4302533.5824501/1‑94 (MQ=60)
CGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCG > SRR4302533.4531190/1‑94 (MQ=60)
ATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGT > SRR4302533.4080278/1‑94 (MQ=60)
ATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGT > SRR4302533.3979822/1‑94 (MQ=60)
TGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTA > SRR4302533.2015563/1‑94 (MQ=60)
TGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTA < SRR4302533.5584645/94‑1 (MQ=60)
GCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAG < SRR4302533.2478252/94‑1 (MQ=60)
CGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGA < SRR4302533.6173568/94‑1 (MQ=60)
CTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAA > SRR4302533.4450457/1‑94 (MQ=60)
CTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAA < SRR4302533.1241238/94‑1 (MQ=60)
TGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGGAGAAAA > SRR4302533.54502/1‑94 (MQ=60)
ACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCG < SRR4302533.4876948/94‑1 (MQ=60)
ACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCG > SRR4302533.5690577/1‑94 (MQ=60)
ACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCG < SRR4302533.832515/94‑1 (MQ=60)
CAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGT > SRR4302533.2431413/1‑94 (MQ=60)
CAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGT > SRR4302533.2375981/1‑94 (MQ=60)
CAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGT < SRR4302533.5972843/94‑1 (MQ=60)
AGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTC > SRR4302533.3940048/1‑94 (MQ=60)
AGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTC < SRR4302533.5403248/94‑1 (MQ=60)
AGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTC < SRR4302533.4811177/94‑1 (MQ=60)
GTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCT < SRR4302533.1642275/94‑1 (MQ=60)
GTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCT > SRR4302533.253933/1‑94 (MQ=60)
GTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCT < SRR4302533.2698063/94‑1 (MQ=60)
GTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCT < SRR4302533.2918448/94‑1 (MQ=60)
GTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCT > SRR4302533.4973319/1‑94 (MQ=60)
TGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTG < SRR4302533.490604/94‑1 (MQ=60)
TGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTG < SRR4302533.2375458/94‑1 (MQ=60)
TGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTG < SRR4302533.4773999/94‑1 (MQ=60)
GGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTGG < SRR4302533.793777/94‑1 (MQ=60)
GGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTGG < SRR4302533.2617108/94‑1 (MQ=60)
GGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTGG > SRR4302533.126096/1‑94 (MQ=60)
GTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTGGC > SRR4302533.2674372/1‑94 (MQ=60)
CACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTGGCGGCG > SRR4302533.1196053/1‑94 (MQ=60)
CGGCTCTGGCGGAGTGGAGGGCCCCGAGTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTGGCGGCGATCAC < SRR4302533.3372696/94‑1 (MQ=60)
|
GATGCAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCAGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTGGCGGCGATCAC > NC_000913/4011657‑4011841
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
