Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,120,133 |
T→C |
T263A (ACG→GCG) |
ftsN ← |
essential cell division protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,120,133 | 0 | T | C | 100.0%
| 736.0
/ NA
| 229 | T263A (ACG→GCG) | ftsN | essential cell division protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (128/101); total (128/101) |
Only 100 of 247 total aligned reads displayed.
CTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGTCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAG > NC_000913/4120043‑4120222
|
cTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGcct > 1:779287/1‑93 (MQ=255)
cTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGcct > 2:2786215/1‑93 (MQ=255)
cTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGcct > 1:2606492/1‑93 (MQ=255)
tttCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGcctc < 1:3547666/93‑1 (MQ=255)
aCCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGcc > 1:830709/1‑93 (MQ=255)
ccGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCt < 2:5275728/93‑1 (MQ=255)
ccGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCt < 1:3703718/93‑1 (MQ=255)
ggCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGtt > 1:4401233/1‑93 (MQ=255)
ccAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTcc > 1:1302729/1‑93 (MQ=255)
ccAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTcc > 2:4270416/1‑93 (MQ=255)
ccAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTcc < 1:3008030/93‑1 (MQ=255)
cAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTccc > 1:1105243/1‑92 (MQ=255)
aaTGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCcgc > 1:1523261/1‑93 (MQ=255)
aaTGACCACACAATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCcgc < 1:3435344/93‑1 (MQ=255)
aTGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCcgcg > 2:1298016/1‑93 (MQ=255)
aTGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCcgcg > 2:1659252/1‑93 (MQ=255)
aTGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCcgcg > 1:599721/1‑93 (MQ=255)
gACCTCACGATTCCAGCCAGTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGcc < 1:2565635/93‑1 (MQ=255)
gACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGcc < 1:1829425/93‑1 (MQ=255)
aCCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCct > 1:5503735/1‑93 (MQ=255)
ccACACGATTCCAGCCATTGTTGGTGGTGATTTTCGCGTCAACGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCctc > 1:3386649/1‑93 (MQ=255)
ccACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCctc < 2:3001788/93‑1 (MQ=255)
ccACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCctc < 1:48340/93‑1 (MQ=255)
acacGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTg > 1:3334470/1‑93 (MQ=255)
acacGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTg > 1:2265751/1‑93 (MQ=255)
acacGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTg > 1:3857737/1‑93 (MQ=255)
cacGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTga < 1:3474623/93‑1 (MQ=255)
cacGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTga > 2:4174374/1‑93 (MQ=255)
acGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaa > 2:5164019/1‑93 (MQ=255)
acGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaa > 2:2391935/1‑93 (MQ=255)
cGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaac > 1:4758597/1‑93 (MQ=255)
cGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaac < 1:2871297/93‑1 (MQ=255)
ttCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaacgaa > 2:1856989/1‑93 (MQ=255)
tCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaacgaac < 1:3164018/93‑1 (MQ=255)
tCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaacgaac > 1:3879462/1‑93 (MQ=255)
ccAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAAcc < 2:2050172/93‑1 (MQ=255)
aGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGc < 2:3805264/93‑1 (MQ=255)
ccATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCAc < 1:407394/93‑1 (MQ=255)
cATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACt > 2:1189112/1‑93 (MQ=255)
cATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACt < 1:5283731/93‑1 (MQ=255)
aTTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTg > 1:5109482/1‑93 (MQ=255)
ttgttgGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGc < 1:5664316/93‑1 (MQ=255)
tgttgGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCa > 1:1173576/1‑93 (MQ=255)
gttgGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCAc > 1:298942/1‑93 (MQ=255)
gttgGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCAc < 1:1464892/93‑1 (MQ=255)
ttgGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCAcc < 2:759824/93‑1 (MQ=255)
ttgGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCAcc < 1:1507239/93‑1 (MQ=255)
tggtggTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCa > 2:4855164/1‑93 (MQ=255)
gtggtgATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATc > 2:3105807/1‑93 (MQ=255)
gtggtgATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATc < 1:6068886/93‑1 (MQ=255)
ggtgATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCa > 1:3893802/1‑93 (MQ=255)
gtgATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAg > 1:4272920/1‑93 (MQ=255)
tgATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAgc < 1:2066171/93‑1 (MQ=255)
ttttCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAgcggc > 2:1028003/1‑93 (MQ=255)
ttttCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAgcggc > 2:1471435/1‑93 (MQ=255)
ttttCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAgcggc < 2:6204215/93‑1 (MQ=255)
tttCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAgcggcg > 2:3424708/1‑93 (MQ=255)
ttCGAGTCAAACCCTTCGAACGCCAGCTGAGCACGTCCCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGt < 2:4188959/93‑1 (MQ=255)
tCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGtt < 1:5769623/93‑1 (MQ=255)
cGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTc > 2:6091141/1‑93 (MQ=255)
gAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCg < 2:3877919/93‑1 (MQ=255)
gTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTc < 1:906653/93‑1 (MQ=255)
tCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCt > 1:1225917/1‑93 (MQ=255)
cAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCtt < 2:5829207/93‑1 (MQ=255)
aaaGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCttt > 1:1680268/1‑93 (MQ=255)
aaaGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCttt > 2:396265/1‑93 (MQ=255)
aaaGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGCTCGTCttt > 1:6256172/1‑93 (MQ=255)
aGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCttttt < 1:5813851/93‑1 (MQ=255)
aGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCttttt > 1:6154574/1‑93 (MQ=255)
aGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCttttt < 2:1554556/93‑1 (MQ=255)
aGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCttttt > 1:250865/1‑93 (MQ=255)
gCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCtttttt > 2:3855097/1‑93 (MQ=255)
ccTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCTTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTtc < 1:2392076/93‑1 (MQ=255)
cTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTtct < 1:2284418/93‑1 (MQ=255)
cTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTtct > 2:2487775/1‑93 (MQ=255)
ttCGAACGCCAGCTGAGCACGTCCCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTtctc < 1:1746942/93‑1 (MQ=255)
ttCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGACCGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTtctc < 2:679588/93‑1 (MQ=255)
ttCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTtctc > 2:2144464/1‑93 (MQ=255)
ttCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTtctc > 2:5028894/1‑93 (MQ=255)
ttCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTtctc > 2:4648922/1‑93 (MQ=255)
ttCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTtctc > 2:4496441/1‑93 (MQ=255)
cGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTccg > 1:3129072/1‑93 (MQ=255)
aaCGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTccgcc > 2:2600373/1‑93 (MQ=255)
aCGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTccgccg > 1:104574/1‑93 (MQ=255)
cGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGt > 2:4711662/1‑93 (MQ=255)
cGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGt > 1:3756085/1‑93 (MQ=255)
gCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTc > 2:3754938/1‑93 (MQ=255)
ctggCTGAGCACTTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCg < 2:2956843/90‑1 (MQ=255)
ccAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCg > 1:675092/1‑93 (MQ=255)
aGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGt > 2:4178071/1‑93 (MQ=255)
aGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGt > 2:5631999/1‑93 (MQ=255)
aGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGt > 2:3968904/1‑93 (MQ=255)
tGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGtttt > 1:644792/1‑93 (MQ=255)
gAGCAGGTCCCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTg < 1:191983/93‑1 (MQ=255)
gAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTg < 1:4176504/93‑1 (MQ=255)
gCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGgc < 2:5527910/93‑1 (MQ=255)
gCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGgc < 1:5407314/93‑1 (MQ=255)
gCACATACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGgc < 1:4595951/93‑1 (MQ=255)
tACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTc < 2:5569936/93‑1 (MQ=255)
ccGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAg < 2:3568575/93‑1 (MQ=255)
|
CTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGTCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAG > NC_000913/4120043‑4120222
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCCTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGTCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAGCGGC > NC_000913/4120040‑4120226
|
TGCCTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGC > SRR4302533.5045939/1‑94 (MQ=60)
GCCTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCC > SRR4302533.1209281/1‑94 (MQ=60)
GCCTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCC < SRR4302533.6277807/94‑1 (MQ=60)
CCTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCT > SRR4302533.2622501/1‑94 (MQ=60)
CCTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCT > SRR4302533.3793943/1‑94 (MQ=60)
CCTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCT > SRR4302533.783876/1‑94 (MQ=60)
TTTCACCGGGCCAATGACTACACGATTCCAGCCATTGTTGGGGGTGATTTTCGAGTCAAAGCCTTCGAACGNCAGCTGAGCACGTACNGNNNCT > SRR4302533.2714806/1‑94 (MQ=60)
TTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCT < SRR4302533.3569531/94‑1 (MQ=60)
TTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCT < SRR4302533.4045398/94‑1 (MQ=60)
CACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCC > SRR4302533.6258707/1‑94 (MQ=60)
CACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCC > SRR4302533.835577/1‑94 (MQ=60)
CCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTG < SRR4302533.3726464/94‑1 (MQ=60)
GGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTT > SRR4302533.4427807/1‑94 (MQ=60)
GGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTT > SRR4302533.1743505/1‑94 (MQ=60)
GGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTC < SRR4302533.1729874/94‑1 (MQ=60)
GCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCC > SRR4302533.1310560/1‑94 (MQ=60)
GCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCC > SRR4302533.1119545/1‑94 (MQ=60)
GCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCC > SRR4302533.3578885/1‑94 (MQ=60)
CCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCG > SRR4302533.1327572/1‑94 (MQ=60)
CCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCG < SRR4302533.3026432/94‑1 (MQ=60)
CCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCG < SRR4302533.675190/94‑1 (MQ=60)
CCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCC > SRR4302533.1111794/1‑94 (MQ=60)
CAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGC > SRR4302533.1532428/1‑94 (MQ=60)
AATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCG > SRR4302533.603250/1‑94 (MQ=60)
AATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCC > SRR4302533.3916836/1‑94 (MQ=60)
AATGACCACACAATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCG < SRR4302533.3456566/94‑1 (MQ=60)
TGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCC > SRR4302533.5703165/1‑94 (MQ=60)
GACCTCACGATTCCAGCCAGTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCT < SRR4302533.2581423/94‑1 (MQ=60)
GACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCT > SRR4302533.5536943/1‑94 (MQ=60)
GACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCT < SRR4302533.1840594/94‑1 (MQ=60)
ACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGCGTCAACGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTC > SRR4302533.3407558/1‑94 (MQ=60)
ACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTC > SRR4302533.2347637/1‑94 (MQ=60)
CCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCT < SRR4302533.48674/94‑1 (MQ=60)
CCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGAACGTACCGCCTCTGCCTGTTCCGCGCCTCT > SRR4302533.6325401/1‑94 (MQ=60)
CACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTG > SRR4302533.1508550/1‑94 (MQ=60)
CACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTG > SRR4302533.1938518/1‑94 (MQ=60)
CACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTG > SRR4302533.3355076/1‑94 (MQ=60)
CACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTG > SRR4302533.2279769/1‑94 (MQ=60)
CACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTG > SRR4302533.3881292/1‑94 (MQ=60)
ACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGA > SRR4302533.1283621/1‑94 (MQ=60)
ACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGA > SRR4302533.4210655/1‑94 (MQ=60)
ACACGATTCCAGCCATTGTTGGTGGCGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGA > SRR4302533.3734746/1‑94 (MQ=60)
cgtGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAA < SRR4302533.4163937/91‑1 (MQ=60)
CACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAA < SRR4302533.3496062/94‑1 (MQ=60)
CACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAA < SRR4302533.684374/94‑1 (MQ=60)
ACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAAC > SRR4302533.3132862/1‑94 (MQ=60)
ACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAAC > SRR4302533.4787466/1‑94 (MQ=60)
ACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAAC < SRR4302533.1529293/94‑1 (MQ=60)
CGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACG < SRR4302533.2888963/94‑1 (MQ=60)
CGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACG < SRR4302533.1531615/94‑1 (MQ=60)
CGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACG < SRR4302533.137174/94‑1 (MQ=60)
CGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACG < SRR4302533.179380/94‑1 (MQ=60)
TTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAAC > SRR4302533.3903134/1‑94 (MQ=60)
TCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAAGGAACC > SRR4302533.4411404/1‑94 (MQ=60)
TCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACC < SRR4302533.4595406/94‑1 (MQ=60)
TCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACC < SRR4302533.3183492/94‑1 (MQ=60)
CCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCG > SRR4302533.5571169/1‑94 (MQ=60)
CAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGC > SRR4302533.2609154/1‑94 (MQ=60)
AGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCA < SRR4302533.3156641/94‑1 (MQ=60)
GCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCAC < SRR4302533.904582/94‑1 (MQ=60)
GCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCAC > SRR4302533.5205964/1‑94 (MQ=60)
CCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACT < SRR4302533.409843/94‑1 (MQ=60)
CCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACT < SRR4302533.5809720/94‑1 (MQ=60)
CATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTG > SRR4302533.5140360/1‑94 (MQ=60)
CATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTG < SRR4302533.5315385/94‑1 (MQ=60)
CATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTG < SRR4302533.5404015/94‑1 (MQ=60)
CATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTG < SRR4302533.856532/94‑1 (MQ=60)
TTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCA > SRR4302533.4108567/1‑94 (MQ=60)
TTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCA < SRR4302533.4650872/94‑1 (MQ=60)
TTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCA < SRR4302533.5698538/94‑1 (MQ=60)
TTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCA > SRR4302533.5929725/1‑94 (MQ=60)
TTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCA > SRR4302533.1180619/1‑94 (MQ=60)
TGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCAC < SRR4302533.1063735/94‑1 (MQ=60)
TGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCAC > SRR4302533.300771/1‑94 (MQ=60)
GTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACC < SRR4302533.1473724/94‑1 (MQ=60)
TTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCA < SRR4302533.1516322/94‑1 (MQ=60)
TGGTGGTGATTTTCGAGTCAAGGCCTTCGGACGCCAGGTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCAT < SRR4302533.2430736/94‑1 (MQ=60)
TGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCAT < SRR4302533.680408/94‑1 (MQ=60)
GTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCC < SRR4302533.6105608/94‑1 (MQ=60)
TGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCA < SRR4302533.5838959/94‑1 (MQ=60)
TGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCA < SRR4302533.2283952/94‑1 (MQ=60)
TGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCA > SRR4302533.3917562/1‑94 (MQ=60)
GGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAG > SRR4302533.4298633/1‑94 (MQ=60)
GTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGC > SRR4302533.2562578/1‑94 (MQ=60)
TGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCG < SRR4302533.2078904/94‑1 (MQ=60)
ATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATTCAGCGGC > SRR4302533.2612428/1‑94 (MQ=60)
ATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGC < SRR4302533.4303312/94‑1 (MQ=60)
ATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGC > SRR4302533.5036791/1‑94 (MQ=60)
TTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCG < SRR4302533.5460890/94‑1 (MQ=60)
TTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTT < SRR4302533.3550067/94‑1 (MQ=60)
TCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTC < SRR4302533.5804457/94‑1 (MQ=60)
GAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGT > SRR4302533.931843/1‑94 (MQ=60)
GTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCT < SRR4302533.911968/94‑1 (MQ=60)
GTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCT > SRR4302533.1233261/1‑94 (MQ=60)
TCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTT > SRR4302533.1908333/1‑94 (MQ=60)
TCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTT > SRR4302533.3024822/1‑94 (MQ=60)
TCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTT < SRR4302533.3287011/94‑1 (MQ=60)
TCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTT > SRR4302533.3901823/1‑94 (MQ=60)
TCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTT > SRR4302533.6122343/1‑94 (MQ=60)
CAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTT > SRR4302533.3465162/1‑94 (MQ=60)
CAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTT < SRR4302533.605469/94‑1 (MQ=60)
CAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTT > SRR4302533.4840946/1‑94 (MQ=60)
CAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTT < SRR4302533.2657470/94‑1 (MQ=60)
CAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTT > SRR4302533.1690446/1‑94 (MQ=60)
CAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTT > SRR4302533.3380536/1‑94 (MQ=60)
CAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGCTCGTCTTT > SRR4302533.6293583/1‑94 (MQ=60)
CAAAGCCTACGAAGGCCAGCGGAGCACGTACAGCCTCTGCCCGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTT < SRR4302533.3742783/94‑1 (MQ=60)
AAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTT > SRR4302533.6191605/1‑94 (MQ=60)
AAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTT > SRR4302533.252412/1‑94 (MQ=60)
AGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTT > SRR4302533.1641536/1‑94 (MQ=60)
AGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTT < SRR4302533.5848963/94‑1 (MQ=60)
CCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCTTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCT < SRR4302533.2406841/94‑1 (MQ=60)
CCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCT > SRR4302533.2968986/1‑94 (MQ=60)
CTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTC < SRR4302533.4924464/94‑1 (MQ=60)
CTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTC < SRR4302533.2298556/94‑1 (MQ=60)
CTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTC > SRR4302533.1213225/1‑94 (MQ=60)
CTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTC > SRR4302533.813639/1‑94 (MQ=60)
CTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTC < SRR4302533.3883667/94‑1 (MQ=60)
TTCGAACGCCAGCTGAGCACGTCCCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCC < SRR4302533.1757572/94‑1 (MQ=60)
TCGACCGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCG < SRR4302533.3526631/94‑1 (MQ=60)
TCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCG < SRR4302533.554790/94‑1 (MQ=60)
TCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCG > SRR4302533.3148311/1‑94 (MQ=60)
CGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGC > SRR4302533.1915503/1‑94 (MQ=60)
GAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCC > SRR4302533.2230204/1‑94 (MQ=60)
GAACGCCAGCTGAGCACGCACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCC > SRR4302533.2931589/1‑94 (MQ=60)
AACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCG > SRR4302533.105227/1‑94 (MQ=60)
ACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGT > SRR4302533.3779109/1‑94 (MQ=60)
GCCAGCTGAGCCCGTCCCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGACGTTCATCTTTTTTCTCCGCCGTCG < SRR4302533.6343950/94‑1 (MQ=60)
GCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCG < SRR4302533.3118260/94‑1 (MQ=60)
GCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCG > SRR4302533.679080/1‑94 (MQ=60)
CAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGT > SRR4302533.5403611/1‑94 (MQ=60)
GCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTT > SRR4302533.3437615/1‑94 (MQ=60)
CTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTT > SRR4302533.648588/1‑94 (MQ=60)
TGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTG > SRR4302533.1230523/1‑94 (MQ=60)
TGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTG > SRR4302533.6073049/1‑94 (MQ=60)
GAGCAGGTCCCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGG < SRR4302533.193192/94‑1 (MQ=60)
GAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGG < SRR4302533.4698055/94‑1 (MQ=60)
GAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGG > SRR4302533.2331137/1‑94 (MQ=60)
GAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGG < SRR4302533.4201810/94‑1 (MQ=60)
AGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGAACTGCACCATCCAGCGGCGCTCGTCTTTTTTCTCCGCCGGCGGGTTTGGC > SRR4302533.3410488/1‑94 (MQ=60)
GCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCG < SRR4302533.5439808/94‑1 (MQ=60)
GCACATACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCG < SRR4302533.4623792/94‑1 (MQ=60)
CACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGC > SRR4302533.3227638/1‑94 (MQ=60)
CGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGT > SRR4302533.2190477/1‑94 (MQ=60)
CCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAGC > SRR4302533.3437344/1‑94 (MQ=60)
CCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAGC > SRR4302533.3810186/1‑94 (MQ=60)
CCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAGCGGC > SRR4302533.3848203/1‑94 (MQ=60)
CCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAGCGGC > SRR4302533.4493142/1‑94 (MQ=60)
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TGCCTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGTCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAGCGGC > NC_000913/4120040‑4120226
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
