Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,298,670 |
A→G |
L616S (TTG→TCG) |
yjcQ ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,298,670 | 0 | A | G | 100.0%
| 662.2
/ NA
| 207 | L616S (TTG→TCG) | yjcQ | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (84/123); total (84/123) |
Only 100 of 222 total aligned reads displayed.
AGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTC‑TTCAAGCGTTATT > NC_000913/4298581‑4298759
|
cagACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCgg < 2:896879/93‑1 (MQ=255)
gACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCgggg > 1:2242008/1‑92 (MQ=255)
gACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGc > 2:5137404/1‑93 (MQ=255)
aCGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCg > 1:1019671/1‑93 (MQ=255)
tGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGGGGGGGGGCGaaa > 1:3311142/1‑93 (MQ=255)
tGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGaaa < 2:4893060/93‑1 (MQ=255)
gAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGaaaa < 2:1296441/93‑1 (MQ=255)
aaGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGc < 1:3489544/93‑1 (MQ=255)
aaGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGc > 1:1314959/1‑93 (MQ=255)
aaGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGc < 2:4210140/93‑1 (MQ=255)
aaGTTGACGATTGATCATGGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGc < 2:1023481/93‑1 (MQ=255)
aGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCt < 1:4102292/93‑1 (MQ=255)
aGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCt < 1:275805/93‑1 (MQ=255)
gTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTAGCGAGCGGGCGAAAAGCTg < 2:6115973/93‑1 (MQ=255)
ttGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTgg < 1:45825/93‑1 (MQ=255)
cGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGGGAAAAGCTGGCAGa > 2:4229733/1‑93 (MQ=255)
aTTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACg < 2:2268804/93‑1 (MQ=255)
aTTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACg < 2:5647826/93‑1 (MQ=255)
ttGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACgt > 1:2434333/1‑93 (MQ=255)
ttGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACgt < 2:4535034/93‑1 (MQ=255)
ttGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACgt > 2:2575570/1‑93 (MQ=255)
tGATCATTGCGTGGCTCCTTCTCCCTGTTCCGTTGCGGGCGTTAATGCCGGGGCTGCCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACgtg < 2:1755860/93‑1 (MQ=255)
gATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGGACAGCTGGCAGACgtgt > 1:4773338/1‑93 (MQ=255)
gATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGGTGGCAGACgtgt > 1:111405/1‑93 (MQ=255)
gATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACgtgt < 2:135465/93‑1 (MQ=255)
gATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACgtgt < 2:4355855/93‑1 (MQ=255)
gATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACgtgt < 1:698320/93‑1 (MQ=255)
gATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACgtgt < 2:2660921/93‑1 (MQ=255)
gATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACgtgt > 2:2705101/1‑93 (MQ=255)
aTCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGtt > 1:996410/1‑93 (MQ=255)
aTCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGtt < 2:3805260/93‑1 (MQ=255)
tCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGGAAAGCTGGCAGACGTGTTg > 2:5055019/1‑93 (MQ=255)
tCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTg < 2:3928309/93‑1 (MQ=255)
cATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGc > 2:2882966/1‑93 (MQ=255)
aaTTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGc < 1:3628023/92‑1 (MQ=255)
aTTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCCGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCt > 1:1494028/1‑93 (MQ=255)
ttGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTc > 1:1861973/1‑93 (MQ=255)
tGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTcc < 2:915581/93‑1 (MQ=255)
tGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTcc < 1:3526870/93‑1 (MQ=255)
tGCGTGCCTCTTTGTGCCTGTTCCGTGGCGGCCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTcc < 2:248381/93‑1 (MQ=255)
gCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCt > 2:1085214/1‑93 (MQ=255)
gTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGt < 1:1539990/93‑1 (MQ=255)
gTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGt < 1:3027401/93‑1 (MQ=255)
ggCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGttt < 2:2352649/93‑1 (MQ=255)
ggCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGttt < 1:672889/93‑1 (MQ=255)
gCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGtttt > 1:5987627/1‑93 (MQ=255)
tCCTTGTGCCTGTTCCGTGGCGGGCGTTATTGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTtaa < 1:94904/93‑1 (MQ=255)
tCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTtaa > 1:1328360/1‑93 (MQ=255)
ccTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTtaat > 1:2531083/1‑93 (MQ=255)
cTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTtaata < 2:4979341/93‑1 (MQ=255)
ttGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTtaataa > 2:4074064/1‑93 (MQ=255)
ttGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTtaataa > 1:4075101/1‑93 (MQ=255)
tgtgCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAg < 2:3741055/93‑1 (MQ=255)
tgtgCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAg < 2:3479549/93‑1 (MQ=255)
tgCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGt < 2:1902532/93‑1 (MQ=255)
tgCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGt < 1:5105568/93‑1 (MQ=255)
gCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTg < 2:3539411/93‑1 (MQ=255)
gCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTg < 1:1635381/93‑1 (MQ=255)
gCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTg < 1:345699/93‑1 (MQ=255)
tGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGc > 1:2118647/1‑93 (MQ=255)
tGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGc < 1:4965573/93‑1 (MQ=255)
ttCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAg < 2:4622101/93‑1 (MQ=255)
tCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAgg < 2:4549658/93‑1 (MQ=255)
ccGTGGCGGGCTTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGa < 2:182570/93‑1 (MQ=255)
ccGTGGCGGGCGTTAATGCCGGGTCTGTCCAGTCTGGCGAGCGAGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGa < 1:3613660/93‑1 (MQ=255)
ccGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGa < 1:536477/93‑1 (MQ=255)
cGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGAt < 2:4461166/93‑1 (MQ=255)
tGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGCGGGCAGGATgg > 2:5815483/1‑93 (MQ=255)
ggcgggcgTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGGGGGCAGGATGGc > 2:1420992/1‑93 (MQ=255)
gggcgTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTg > 1:231528/1‑93 (MQ=255)
gcgTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAACGCTGGCAGACGTGTTGCTCCTGTTTTTATAAGGTGGGCAGGATGGCCTgag > 2:944332/1‑93 (MQ=255)
gcgTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTgag < 2:2783857/93‑1 (MQ=255)
gcgTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTgag < 2:1160082/93‑1 (MQ=255)
gcgTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTgag > 2:5707619/1‑93 (MQ=255)
gcgTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTgag > 1:6134063/1‑93 (MQ=255)
gcgTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTgag > 1:6032789/1‑93 (MQ=255)
cgTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTgaga < 2:2138209/93‑1 (MQ=255)
cgTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTgaga < 2:1693069/93‑1 (MQ=255)
cgTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGACTgaga > 2:5300155/1‑93 (MQ=255)
ttAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAgg > 2:4436637/1‑93 (MQ=255)
tAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGGGGc < 2:3214523/93‑1 (MQ=255)
aaTGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCg > 1:444500/1‑93 (MQ=255)
aaTGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCg < 1:4986006/93‑1 (MQ=255)
aTGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCTGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCgg > 1:3374990/1‑93 (MQ=255)
tGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGCTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCggg > 2:685799/1‑93 (MQ=255)
gCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCgggg > 1:3272455/1‑92 (MQ=255)
gCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGgt < 1:1148618/93‑1 (MQ=255)
gCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGgt < 2:4856061/93‑1 (MQ=255)
ggggCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGtc < 1:4645598/93‑1 (MQ=255)
gggCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGtct < 2:1492043/93‑1 (MQ=255)
cTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTC‑tt > 1:4191491/1‑93 (MQ=255)
tGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGCGAGGCGGGGGGGTC‑TTc > 2:5953839/1‑93 (MQ=255)
tGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGGCTC‑TTc > 1:6274481/1‑93 (MQ=255)
tCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTC‑TTTaa > 1:6207456/1‑93 (MQ=255)
ccAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGGCTC‑TTCAAg > 2:1042268/1‑93 (MQ=255)
cAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTC‑TTCAAGc < 1:3691030/93‑1 (MQ=255)
aGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGGCTC‑CTCAAggg > 2:3936880/1‑91 (MQ=255)
cTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGGCTCTTTAAAGCGtt > 1:1686478/1‑93 (MQ=255)
tGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTC‑TTCCAGCGGTAt > 2:4716105/1‑93 (MQ=255)
ggCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGGGGGGGTTTA‑TTCAAGCGTtttt > 1:4876285/1‑93 (MQ=255)
|
AGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTC‑TTCAAGCGTTATT > NC_000913/4298581‑4298759
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTG > NC_000913/4298577‑4298761
|
CAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCG > SRR4302533.1866942/1‑94 (MQ=60)
CAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCG < SRR4302533.4901251/94‑1 (MQ=60)
CAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCG < SRR4302533.1297805/94‑1 (MQ=60)
AACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGA < SRR4302533.3270509/94‑1 (MQ=60)
AACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGA > SRR4302533.1501040/1‑94 (MQ=60)
CAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGC > SRR4302533.4839563/1‑94 (MQ=60)
AGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCG > SRR4302533.279988/1‑94 (MQ=60)
CAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGG > SRR4302533.5947773/1‑94 (MQ=60)
AGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGG > SRR4302533.2255865/1‑94 (MQ=60)
GACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCG > SRR4302533.1025664/1‑94 (MQ=60)
GACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCG > SRR4302533.165708/1‑94 (MQ=60)
AAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGC > SRR4302533.1322846/1‑94 (MQ=60)
AAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCT < SRR4302533.3511066/94‑1 (MQ=60)
AGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTG < SRR4302533.277484/94‑1 (MQ=60)
AGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTG < SRR4302533.4127254/94‑1 (MQ=60)
GTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGG < SRR4302533.5000559/94‑1 (MQ=60)
TTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGC < SRR4302533.46144/94‑1 (MQ=60)
TGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCA > SRR4302533.4154500/1‑94 (MQ=60)
TGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCA < SRR4302533.3652327/94‑1 (MQ=60)
CGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGAC < SRR4302533.3306036/94‑1 (MQ=60)
GATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTTCAGTCTGGCGNNCGGGCGAAAAGCTGNCAGNCG > SRR4302533.2231643/1‑94 (MQ=60)
ATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGT > SRR4302533.1329195/1‑94 (MQ=60)
ATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGT > SRR4302533.2449370/1‑94 (MQ=60)
TTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTG < SRR4302533.113901/94‑1 (MQ=60)
TGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGGACAGCTGGCAGACGTGT > SRR4302533.4802262/1‑94 (MQ=60)
TGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGGTGGCAGACGTGT > SRR4302533.112110/1‑94 (MQ=60)
TGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGT > SRR4302533.349577/1‑94 (MQ=60)
TGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGT > SRR4302533.971497/1‑94 (MQ=60)
GATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTT > SRR4302533.1002228/1‑94 (MQ=60)
GATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTT < SRR4302533.702451/94‑1 (MQ=60)
GATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTT < SRR4302533.659715/94‑1 (MQ=60)
CATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCT < SRR4302533.6304944/94‑1 (MQ=60)
CATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCCGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCT > SRR4302533.1503034/1‑94 (MQ=60)
AATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCT < SRR4302533.3650346/94‑1 (MQ=60)
ATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTC > SRR4302533.1873327/1‑94 (MQ=60)
TTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCC < SRR4302533.4717268/94‑1 (MQ=60)
TGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCT > SRR4302533.1236580/1‑94 (MQ=60)
TGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCT < SRR4302533.3548608/94‑1 (MQ=60)
TGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCT < SRR4302533.1408874/94‑1 (MQ=60)
TGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCT < SRR4302533.6070739/94‑1 (MQ=60)
GCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTG < SRR4302533.4718677/94‑1 (MQ=60)
GTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTT < SRR4302533.3045928/94‑1 (MQ=60)
GTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTT < SRR4302533.1549265/94‑1 (MQ=60)
GGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT > SRR4302533.6023886/1‑94 (MQ=60)
GGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT < SRR4302533.676864/94‑1 (MQ=60)
CTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAA > SRR4302533.1336329/1‑94 (MQ=60)
TCCTTGTGCCTGTTCCGTGGCGGGCGTTATTGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAAT < SRR4302533.95501/94‑1 (MQ=60)
TCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAAT > SRR4302533.2546665/1‑94 (MQ=60)
TCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAAT > SRR4302533.4338172/1‑94 (MQ=60)
CTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAA > SRR4302533.4196070/1‑94 (MQ=60)
CTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAA < SRR4302533.6201639/94‑1 (MQ=60)
CTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAA > SRR4302533.4099909/1‑94 (MQ=60)
TTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAG < SRR4302533.1629603/94‑1 (MQ=60)
TTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAG < SRR4302533.2612643/94‑1 (MQ=60)
TGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTG < SRR4302533.5136409/94‑1 (MQ=60)
GCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGG < SRR4302533.2131616/94‑1 (MQ=60)
GCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGG < SRR4302533.347811/94‑1 (MQ=60)
GCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGG < SRR4302533.1645286/94‑1 (MQ=60)
CCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGG < SRR4302533.1982427/94‑1 (MQ=60)
CTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGC > SRR4302533.2131714/1‑94 (MQ=60)
CTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGC < SRR4302533.3355547/94‑1 (MQ=60)
TGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCA < SRR4302533.4995674/94‑1 (MQ=60)
GTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAG < SRR4302533.1410682/94‑1 (MQ=60)
TTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGG > SRR4302533.1079937/1‑94 (MQ=60)
CCGTGGCGGGCGTTAATGCCGGGTCTGTCCAGTCTGGCGAGCGAGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGAT < SRR4302533.3635896/94‑1 (MQ=60)
CCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGAT > SRR4302533.5083717/1‑94 (MQ=60)
CCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGAT < SRR4302533.539664/94‑1 (MQ=60)
CGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTG > SRR4302533.232959/1‑94 (MQ=60)
CGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTG < SRR4302533.3554329/94‑1 (MQ=60)
GGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGA > SRR4302533.2274901/1‑94 (MQ=60)
GGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAG > SRR4302533.6171019/1‑94 (MQ=60)
GGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAG < SRR4302533.364940/94‑1 (MQ=60)
GGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAG > SRR4302533.6069350/1‑94 (MQ=60)
GTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGG < SRR4302533.4664479/94‑1 (MQ=60)
TAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCG < SRR4302533.6206733/94‑1 (MQ=60)
TAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCG > SRR4302533.447157/1‑94 (MQ=60)
TAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCG < SRR4302533.1736878/94‑1 (MQ=60)
AATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCTGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGG > SRR4302533.3395833/1‑94 (MQ=60)
AATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGG < SRR4302533.5016238/94‑1 (MQ=60)
AATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGG < SRR4302533.3812877/94‑1 (MQ=60)
AATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGG < SRR4302533.5227618/94‑1 (MQ=60)
TGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGT < SRR4302533.3524145/94‑1 (MQ=60)
TGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGT < SRR4302533.696056/94‑1 (MQ=60)
TGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGG > SRR4302533.3292650/1‑94 (MQ=60)
GCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTG < SRR4302533.1155476/94‑1 (MQ=60)
GGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGggtgt > SRR4302533.333605/1‑89 (MQ=60)
GGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCT < SRR4302533.1509029/94‑1 (MQ=60)
GGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCT < SRR4302533.4673751/94‑1 (MQ=60)
GGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCT < SRR4302533.6068685/94‑1 (MQ=60)
GGCTGTCCAGTCTGGCGAGTGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCT < SRR4302533.967580/94‑1 (MQ=60)
GCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTT < SRR4302533.3463467/94‑1 (MQ=60)
GCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTCTT > SRR4302533.4216860/1‑94 (MQ=60)
CTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGgggctcctc > SRR4302533.357881/1‑85 (MQ=60)
CTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTC > SRR4302533.4114476/1‑94 (MQ=60)
CTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGGCTCTTC > SRR4302533.6311955/1‑94 (MQ=60)
ATGTCCAGTCTGTCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTC < SRR4302533.5255097/94‑1 (MQ=60)
GTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTTAA > SRR4302533.6244683/1‑94 (MQ=60)
CCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGC < SRR4302533.4960710/94‑1 (MQ=60)
CAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGggggtcctccagcg > SRR4302533.2629494/1‑80 (MQ=60)
CAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCG < SRR4302533.2536716/94‑1 (MQ=60)
CAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCG < SRR4302533.3713708/94‑1 (MQ=60)
CAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCG < SRR4302533.3253366/94‑1 (MQ=60)
AGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGGCTCTTCCAGCGT > SRR4302533.2416847/1‑94 (MQ=60)
GTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGGCTCTTTAAGCGTT > SRR4302533.2463866/1‑94 (MQ=60)
GTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGGCTCTTCAAacggt > SRR4302533.4545170/1‑89 (MQ=60)
TCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGgggctctttaaagcgtt > SRR4302533.1696693/1‑77 (MQ=60)
TCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTA < SRR4302533.95457/94‑1 (MQ=60)
TGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGGGGGGGTTTATTCAAGCGTTTTT > SRR4302533.4905828/1‑94 (MQ=60)
GGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTT > SRR4302533.1050490/1‑94 (MQ=60)
GGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGGCTCTTCAAGCGTTATTT > SRR4302533.3515272/1‑94 (MQ=60)
GCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTG < SRR4302533.4120064/94‑1 (MQ=60)
|
CAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTG > NC_000913/4298577‑4298761
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
