Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,448,541 |
+C |
intergenic (+46/‑92) |
ytfQ → / → ytfR |
putative LACI‑type transcriptional regulator/YtfR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,448,541 | 1 | . | C | 100.0%
| 602.1
/ NA
| 212 | intergenic (+46/‑92) | ytfQ/ytfR | putative LACI‑type transcriptional regulator/YtfR |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (130/82); total (130/82) |
Only 100 of 232 total aligned reads displayed.
ATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCG‑‑G‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCG > NC_000913/4448449‑4448623
|
aTACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCg < 2:1285754/93‑1 (MQ=255)
aCCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCgcg < 1:2257312/93‑3 (MQ=255)
cGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCgcgcc > 2:4039379/1‑89 (MQ=255)
aagaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCgg < 2:2620303/93‑1 (MQ=37)
aagaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCgg < 1:2496790/93‑1 (MQ=37)
agaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGc < 2:1926489/93‑1 (MQ=37)
agaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGc > 2:3341962/1‑93 (MQ=37)
gaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCg > 2:2810640/1‑93 (MQ=37)
gaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCg > 1:835105/1‑93 (MQ=37)
aaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGa < 1:1251979/93‑1 (MQ=37)
aaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGATTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGa < 1:3645422/93‑1 (MQ=25)
aTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGAt < 1:4916553/93‑1 (MQ=37)
ttAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATg > 1:5694943/1‑93 (MQ=37)
tAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATgg < 1:3883312/93‑1 (MQ=37)
agagAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATggg > 2:6088448/1‑92 (MQ=37)
agagAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATggg > 2:3301381/1‑92 (MQ=37)
agagAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGt > 1:2920332/1‑93 (MQ=37)
gagaAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTg > 2:1802245/1‑93 (MQ=37)
gagaAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTg > 1:5971206/1‑93 (MQ=37)
gaagaagaaAAATATGGGTTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCa < 2:1454739/93‑1 (MQ=25)
gaagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCa > 2:1343554/1‑93 (MQ=37)
aagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCAc > 2:2344801/1‑93 (MQ=37)
aagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCAc < 1:5917917/93‑1 (MQ=37)
aagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCAc > 2:5307301/1‑93 (MQ=37)
aagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCAc > 2:5548940/1‑93 (MQ=37)
agaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACt > 2:5894308/1‑93 (MQ=37)
gaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTg > 2:2028768/1‑93 (MQ=37)
gaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTg > 1:3672460/1‑93 (MQ=37)
gaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTg < 1:2363741/93‑1 (MQ=37)
aagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGa < 1:6186135/93‑1 (MQ=37)
aaaaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGCAGc > 2:3163104/1‑93 (MQ=25)
aaaaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGc < 2:1741064/93‑1 (MQ=37)
aaaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGcc < 1:4011937/93‑1 (MQ=37)
aaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGccg > 2:1212983/1‑92 (MQ=37)
aaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCt < 2:4649313/93‑1 (MQ=37)
aaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCt < 2:5111350/93‑1 (MQ=37)
tatGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGAt > 1:193551/1‑93 (MQ=25)
gatGGGGTTGTGAGGGTTGTTATGCTTGATCCCTTTTGGTGGGCGGGATAGGGCGCCCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGAt < 2:4355407/92‑1 (MQ=9)
atGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATg > 1:2784107/1‑93 (MQ=25)
tGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGc > 2:3280858/1‑93 (MQ=25)
tGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCAGGCGATGGTGCACTGAAGCCTGATGc > 2:1601616/1‑93 (MQ=37)
ggttATGGAGGTTTGCTATGCTGGATGCCGATTCGTAGGCGGGATAGGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGa < 2:4473549/90‑1 (MQ=18)
ggTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGAc < 1:3606299/93‑1 (MQ=25)
gTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACg > 1:4594421/1‑93 (MQ=25)
gTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACg > 1:3486385/1‑93 (MQ=25)
tATTGAGGTTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGc < 2:4562120/93‑1 (MQ=25)
tATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGc > 2:5147601/1‑93 (MQ=25)
tATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCACCCGGCGATGGTGCACTGAAGCCTGATGCGACGc < 2:2980254/93‑1 (MQ=25)
aTTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCt > 1:5543690/1‑93 (MQ=25)
aTTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCt > 2:3531564/1‑93 (MQ=25)
aTTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCt > 2:1501486/1‑93 (MQ=25)
aTTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCt > 2:4753793/1‑93 (MQ=25)
ttGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCtt > 1:2636221/1‑93 (MQ=25)
tGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTa < 2:2750196/93‑1 (MQ=25)
tGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTa > 2:813434/1‑93 (MQ=25)
gAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAc < 2:2879011/93‑1 (MQ=25)
gAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAc < 2:957621/93‑1 (MQ=25)
gAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAc < 2:5609164/93‑1 (MQ=25)
gggTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACcg > 2:3775224/1‑93 (MQ=25)
gggTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACcg > 1:5114965/1‑93 (MQ=25)
ggTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACcgc > 2:2432203/1‑93 (MQ=25)
ggTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACcgc < 1:5285114/93‑1 (MQ=25)
gTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACcgcg < 1:2732884/93‑1 (MQ=25)
ttGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGt > 1:44243/1‑93 (MQ=25)
tGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTc > 1:4700019/1‑93 (MQ=25)
tGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTc > 2:3165379/1‑93 (MQ=25)
gCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCt > 2:3833523/1‑93 (MQ=25)
cTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCtt > 2:668663/1‑93 (MQ=25)
tATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTa > 2:3023482/1‑93 (MQ=21)
tATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTa < 2:1966195/93‑1 (MQ=25)
aTGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTAt < 2:4946849/93‑1 (MQ=21)
aTGCCTGATGCCGATTCGGAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTAt < 2:2489476/93‑1 (MQ=21)
tGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATc > 1:3307348/1‑93 (MQ=21)
tGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATc > 1:2078023/1‑93 (MQ=21)
gCCTGATGCGGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCa < 2:5683565/93‑1 (MQ=21)
gCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCa > 1:5068824/1‑93 (MQ=21)
gCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCa > 1:1416444/1‑93 (MQ=21)
ccgtGATGCCGATTCGTAGCCCGAATAGGGCGCTCGCCC‑CGCATCGGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCa < 2:1137364/90‑1 (MQ=21)
cccTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCa < 1:3355112/92‑1 (MQ=21)
cTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATg < 1:5652262/93‑1 (MQ=25)
tGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGc < 1:2830441/93‑1 (MQ=21)
tGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGc > 1:1056853/1‑93 (MQ=21)
tGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGc > 1:2587311/1‑93 (MQ=21)
gATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGcc < 1:1639966/93‑1 (MQ=21)
gATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGcc < 1:180224/93‑1 (MQ=21)
gATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGcc > 1:5701110/1‑93 (MQ=21)
aTGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCt > 1:5654054/1‑93 (MQ=21)
gCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTAc < 1:648662/93‑1 (MQ=21)
ccGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACt < 2:1691367/93‑1 (MQ=21)
ccGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACt > 1:1766225/1‑93 (MQ=21)
ttCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGa > 2:6020026/1‑93 (MQ=18)
ttCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTAACATGCCTACTGGGa > 2:3215399/1‑93 (MQ=18)
tCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAg > 1:456104/1‑93 (MQ=21)
gTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGcc > 1:3410956/1‑92 (MQ=21)
tAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCAc < 1:5760268/93‑1 (MQ=21)
ccGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCtt > 1:1226311/1‑93 (MQ=21)
ggATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTa > 2:4592307/1‑93 (MQ=21)
gATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTac < 2:4269530/93‑1 (MQ=21)
aTAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTaca > 1:673118/1‑93 (MQ=25)
aGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCg < 2:4982862/93‑1 (MQ=25)
|
ATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCG‑‑G‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCG > NC_000913/4448449‑4448623
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGGCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCA > NC_000913/4448448‑4448633
|
GATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CG < SRR4302533.2086847/94‑1 (MQ=60)
GATACAGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CG < SRR4302533.1191834/94‑1 (MQ=60)
ACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑C‑GCGC < SRR4302533.2271279/94‑1 (MQ=60)
CGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTGGTAGGCGGGATAAGGCG‑‑CT‑‑CGGgccg > SRR4302533.5254095/1‑90 (MQ=60)
CAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccgca > SRR4302533.5768882/1‑87 (MQ=60)
AAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccgcatc < SRR4302533.1702821/94‑10 (MQ=60)
AAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccgcatcc < SRR4302533.3981719/94‑11 (MQ=60)
AAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccgcatcc < SRR4302533.4218813/94‑11 (MQ=60)
AGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCG > SRR4302533.761317/1‑94 (MQ=60)
AGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCG < SRR4302533.3635227/94‑1 (MQ=60)
AGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCG < SRR4302533.3024164/94‑1 (MQ=60)
AGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCG > SRR4302533.2279687/1‑94 (MQ=60)
AGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCG > SRR4302533.833086/1‑94 (MQ=60)
AAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGC < SRR4302533.2512191/94‑1 (MQ=60)
AGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCG > SRR4302533.839999/1‑94 (MQ=60)
GAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGA > SRR4302533.3930882/1‑94 (MQ=60)
GAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGA < SRR4302533.3843936/94‑1 (MQ=60)
AATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGAT < SRR4302533.1259459/94‑1 (MQ=60)
AATTAGAGAAGAAGAAAAATATGGGGTATTGAGGATTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGAT < SRR4302533.3667834/94‑1 (MQ=60)
ATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATG < SRR4302533.4946334/94‑1 (MQ=60)
ATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATG > SRR4302533.5729335/1‑94 (MQ=60)
TAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGT < SRR4302533.3907008/94‑1 (MQ=60)
TAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGT > SRR4302533.2938224/1‑94 (MQ=60)
AGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTG > SRR4302533.6007352/1‑94 (MQ=60)
AGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTG > SRR4302533.5686915/1‑94 (MQ=60)
AGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATCGTG > SRR4302533.5782562/1‑94 (MQ=60)
GAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGC > SRR4302533.5062426/1‑94 (MQ=60)
AAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACT < SRR4302533.5953680/94‑1 (MQ=60)
AAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACT > SRR4302533.594415/1‑94 (MQ=60)
AAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACT > SRR4302533.2524755/1‑94 (MQ=60)
AGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTG < SRR4302533.1720257/94‑1 (MQ=60)
AGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTG > SRR4302533.3695029/1‑94 (MQ=60)
GAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGA < SRR4302533.2378362/94‑1 (MQ=60)
GAAGAAAAATATGGGGTATTGAGGGGTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGCGCACTGA > SRR4302533.3652759/1‑94 (MQ=60)
GAAGAAAAATATGAGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGA > SRR4302533.3425533/1‑94 (MQ=60)
AAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAA < SRR4302533.6223269/94‑1 (MQ=60)
AGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAG < SRR4302533.5905695/94‑1 (MQ=60)
AGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAG < SRR4302533.3113914/94‑1 (MQ=60)
AAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCC < SRR4302533.2623946/94‑1 (MQ=60)
AAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCT < SRR4302533.4036366/94‑1 (MQ=60)
AAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTG > SRR4302533.5048318/1‑94 (MQ=60)
AATATGGGGTATGGGGGGTTGCTATGCCGGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGA < SRR4302533.1882795/94‑1 (MQ=56)
ATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGAT > SRR4302533.194772/1‑94 (MQ=60)
TATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATG > SRR4302533.2801211/1‑94 (MQ=60)
GGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGA > SRR4302533.2841759/1‑94 (MQ=60)
GGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACG < SRR4302533.3628497/94‑1 (MQ=60)
GGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACG > SRR4302533.4622254/1‑94 (MQ=60)
GGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACG > SRR4302533.3507885/1‑94 (MQ=60)
TATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCT > SRR4302533.1874200/1‑94 (MQ=60)
TATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCT > SRR4302533.5577172/1‑94 (MQ=60)
ATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTT > SRR4302533.2652423/1‑94 (MQ=60)
TTGAGGTTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAGGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTA < SRR4302533.4708348/94‑1 (MQ=60)
TGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAC > SRR4302533.2464046/1‑94 (MQ=60)
GAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACC < SRR4302533.3674636/94‑1 (MQ=60)
AGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCG > SRR4302533.5145875/1‑94 (MQ=60)
AGGGTTGCTATGCCTGATGCCGATTCGTAGGCCCGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGCAGCCTGATGCGACGCTTACCG > SRR4302533.2702892/1‑94 (MQ=60)
GGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCG < SRR4302533.5316772/94‑1 (MQ=60)
GGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGAAGCTTACCGCG > SRR4302533.1810128/1‑94 (MQ=60)
GTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGT > SRR4302533.283753/1‑94 (MQ=60)
GTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGT > SRR4302533.44546/1‑94 (MQ=60)
GTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGT < SRR4302533.2749649/94‑1 (MQ=60)
TTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTC > SRR4302533.4728518/1‑94 (MQ=60)
TGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCT < SRR4302533.6118177/94‑1 (MQ=60)
CTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTA < SRR4302533.2612819/94‑1 (MQ=60)
TATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTAT < SRR4302533.1168947/94‑1 (MQ=60)
TATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGGCTTAT > SRR4302533.1527034/1‑94 (MQ=60)
ATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATC > SRR4302533.3327771/1‑94 (MQ=60)
ATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATC < SRR4302533.4832944/94‑1 (MQ=60)
ATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATC > SRR4302533.2090814/1‑94 (MQ=60)
TGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCA > SRR4302533.1425013/1‑94 (MQ=60)
TGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCA > SRR4302533.5099430/1‑94 (MQ=60)
GCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCAT > SRR4302533.1244088/1‑94 (MQ=60)
CCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCAT < SRR4302533.3375844/94‑1 (MQ=60)
CCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATG > SRR4302533.5705862/1‑94 (MQ=60)
CTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGC > SRR4302533.1063067/1‑94 (MQ=60)
CTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGC > SRR4302533.4430753/1‑94 (MQ=60)
CTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGC < SRR4302533.5686425/94‑1 (MQ=60)
CTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGC > SRR4302533.2311633/1‑94 (MQ=60)
CTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGC > SRR4302533.2603217/1‑94 (MQ=60)
TGATGCGTATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCC < SRR4302533.5731924/94‑1 (MQ=60)
TGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCC < SRR4302533.2847862/94‑1 (MQ=60)
TGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCC > SRR4302533.5735538/1‑94 (MQ=60)
TGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCC > SRR4302533.653892/1‑94 (MQ=60)
TGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCC > SRR4302533.196686/1‑94 (MQ=60)
GATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCT > SRR4302533.5688226/1‑94 (MQ=60)
GATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCT < SRR4302533.181348/94‑1 (MQ=60)
GATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCT < SRR4302533.1649900/94‑1 (MQ=60)
ATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTA > SRR4302533.566628/1‑94 (MQ=60)
ATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTA > SRR4302533.5568393/1‑94 (MQ=60)
GCGGATTCGTAGGCGGGATAAGGCGCCCG‑‑CGCCGCATCCGGAGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACT < SRR4302533.4525154/94‑1 (MQ=57)
GCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACT > SRR4302533.1776979/1‑94 (MQ=60)
GCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACT < SRR4302533.652486/94‑1 (MQ=60)
GCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACT > SRR4302533.3551255/1‑94 (MQ=60)
CCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTG > SRR4302533.1919940/1‑94 (MQ=60)
CCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTG < SRR4302533.4603339/94‑1 (MQ=60)
CCGATTCGTAGCCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTG < SRR4302533.3527642/94‑1 (MQ=60)
GATTCGTGGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGG < SRR4302533.1291647/94‑1 (MQ=60)
ATTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGA > SRR4302533.2155830/1‑94 (MQ=60)
TTCGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAG > SRR4302533.458830/1‑94 (MQ=60)
CGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCC > SRR4302533.3432024/1‑94 (MQ=60)
CGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCA > SRR4302533.1535862/1‑94 (MQ=60)
CGTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCA > SRR4302533.3798075/1‑94 (MQ=60)
GTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCAC < SRR4302533.2919274/94‑1 (MQ=60)
GTAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCAC < SRR4302533.5704094/94‑1 (MQ=60)
TAGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACG < SRR4302533.5795026/94‑1 (MQ=60)
AGGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGC > SRR4302533.3333537/1‑94 (MQ=60)
GGCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCT < SRR4302533.2325831/94‑1 (MQ=60)
GCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTT > SRR4302533.1233657/1‑94 (MQ=60)
GCCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTT < SRR4302533.5994965/94‑1 (MQ=60)
CCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTT > SRR4302533.2772012/1‑94 (MQ=60)
CCGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTT > SRR4302533.75854/1‑94 (MQ=60)
CGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTA > SRR4302533.6308037/1‑94 (MQ=60)
CGGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTA > SRR4302533.3346207/1‑94 (MQ=60)
GGATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTAC < SRR4302533.641572/94‑1 (MQ=60)
GATAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACA > SRR4302533.677093/1‑94 (MQ=60)
TAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACC < SRR4302533.3496785/94‑1 (MQ=60)
TAAGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACC > SRR4302533.5136618/1‑94 (MQ=60)
AGGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGG < SRR4302533.4603048/94‑1 (MQ=60)
GGCG‑‑CTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGG < SRR4302533.5493645/94‑1 (MQ=60)
CGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCA > SRR4302533.3777789/1‑94 (MQ=60)
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GATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGGCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCA > NC_000913/4448448‑4448633
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
