Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,448,543 |
+C |
intergenic (+48/‑90) |
ytfQ → / → ytfR |
putative LACI‑type transcriptional regulator/YtfR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,448,542 | 1 | . | C | 99.5%
| 614.0
/ ‑3.8
| 215 | intergenic (+47/‑91) | ytfQ/ytfR | putative LACI‑type transcriptional regulator/YtfR |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base C (129/85); total (130/85) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.82e-01 |
Only 100 of 228 total aligned reads displayed.
GCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCG‑‑G‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCG > NC_000913/4448454‑4448623
|
gaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCg > 2:2810640/1‑93 (MQ=37)
aaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGa < 1:1251979/93‑1 (MQ=37)
aaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGATTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGa < 1:3645422/93‑1 (MQ=25)
aTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGAt < 1:4916553/93‑1 (MQ=37)
tAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATgg < 1:3883312/93‑1 (MQ=37)
agagAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATggg > 2:6088448/1‑92 (MQ=37)
agagAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATggg > 2:4060/1‑92 (MQ=37)
agagAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGt > 1:2920332/1‑93 (MQ=37)
gagaAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTg > 2:1802245/1‑93 (MQ=37)
agaagaagaAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGc > 1:5031960/1‑93 (MQ=37)
gaagaagaaAAATATGGGTTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCa < 2:1454739/93‑1 (MQ=25)
gaagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCa > 2:1343554/1‑93 (MQ=37)
aagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCAc > 2:5548940/1‑93 (MQ=37)
agaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACt > 1:590926/1‑93 (MQ=37)
agaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACt > 2:5894308/1‑93 (MQ=37)
agaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACt > 1:2509295/1‑93 (MQ=37)
gaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTg > 2:1235987/1‑93 (MQ=37)
gaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTg < 1:2363741/93‑1 (MQ=37)
gaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTg > 1:3672460/1‑93 (MQ=37)
gaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTg > 2:2028768/1‑93 (MQ=37)
aagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGa < 1:6186135/93‑1 (MQ=37)
aaaaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGc < 2:1741064/93‑1 (MQ=37)
aaaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGcc < 1:4011937/93‑1 (MQ=37)
aaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCt < 2:5111350/93‑1 (MQ=37)
atatGGGGTATTGAGGGTTGCTAGGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGa < 2:4722645/93‑1 (MQ=25)
tgggggTATTGAGGGTTGCTATGCCTGATGCCGATTCGTGGGCCGGATAGGGCGCTCGC‑GCCGCACCCGGCGATGGTGCACTGAAGCCTGATg < 2:1187275/91‑1 (MQ=37)
tGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCAGGCGATGGTGCACTGAAGCCTGATGc > 2:1601616/1‑93 (MQ=37)
ggggTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCg > 2:449038/1‑93 (MQ=25)
ggTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGAc < 1:3606299/93‑1 (MQ=25)
gTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACg > 1:4594421/1‑93 (MQ=25)
gTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACg > 1:3486385/1‑93 (MQ=25)
tATTGAGGTTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGc < 2:4562120/93‑1 (MQ=25)
tATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGc > 2:5147601/1‑93 (MQ=25)
aTTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCt > 2:4753793/1‑93 (MQ=25)
aTTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCt > 2:1501486/1‑93 (MQ=25)
aTTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCt > 2:3531564/1‑93 (MQ=25)
ttGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCtt > 1:2636221/1‑93 (MQ=25)
tGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTa > 2:813434/1‑93 (MQ=25)
gAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAc < 2:5609164/93‑1 (MQ=25)
gAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAc > 2:4286826/1‑93 (MQ=25)
gAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAc < 2:957621/93‑1 (MQ=25)
gggTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACcg > 2:3775224/1‑93 (MQ=25)
gggTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACcg > 1:5114965/1‑93 (MQ=25)
ggTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACcgc > 2:2432203/1‑93 (MQ=25)
ggTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACcgc < 1:5285114/93‑1 (MQ=25)
gTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACcgcg < 1:2732884/93‑1 (MQ=25)
ttGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGt > 1:282027/1‑93 (MQ=25)
ttGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGt > 1:44243/1‑93 (MQ=25)
tGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTc > 2:332238/1‑93 (MQ=25)
tGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTc > 1:4700019/1‑93 (MQ=25)
gCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCt > 2:3833523/1‑93 (MQ=25)
cTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCtt < 1:2596862/93‑1 (MQ=25)
cTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCtt > 2:668663/1‑93 (MQ=25)
tATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTa < 2:1966195/93‑1 (MQ=25)
tATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTa > 2:3023482/1‑93 (MQ=21)
aTGCCTGATGCCGATTCGGAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTAt < 2:2489476/93‑1 (MQ=21)
tGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATc > 2:2870341/1‑93 (MQ=21)
tGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATc > 1:2078023/1‑93 (MQ=21)
gCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCa < 2:2079981/93‑1 (MQ=21)
gCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCa < 2:328865/93‑1 (MQ=25)
gCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCa > 1:1416444/1‑93 (MQ=21)
cccTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCa < 1:3355112/92‑1 (MQ=21)
cTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATg > 2:1077782/1‑93 (MQ=21)
cTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATg < 1:5652262/93‑1 (MQ=25)
cTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATg > 1:5671611/1‑93 (MQ=21)
cTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATg > 2:3213484/1‑93 (MQ=21)
tGATGCGTATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGc < 1:5697507/93‑1 (MQ=18)
tGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGc < 1:2830441/93‑1 (MQ=21)
tGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGc > 1:2297403/1‑93 (MQ=21)
tGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGc > 1:1056853/1‑93 (MQ=21)
gATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGcc < 2:1896536/93‑1 (MQ=21)
gATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGcc < 1:1639966/93‑1 (MQ=21)
gATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGcc > 1:650056/1‑93 (MQ=21)
gATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGcc < 1:180224/93‑1 (MQ=21)
aTGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCt > 1:5654054/1‑93 (MQ=21)
tGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTa > 1:5534978/1‑93 (MQ=21)
gCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTAc < 2:3157123/93‑1 (MQ=21)
ccGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACt < 2:2927525/93‑1 (MQ=21)
ccGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACt > 1:1766225/1‑93 (MQ=21)
ccGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACt < 2:1691367/93‑1 (MQ=21)
cGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTg > 1:1908300/1‑93 (MQ=21)
ttCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGa > 2:6020026/1‑93 (MQ=18)
tCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAg > 1:456104/1‑93 (MQ=21)
gTAGGCCGGATAAGGGGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGcc > 2:2690373/1‑92 (MQ=21)
gTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGcc > 1:3410956/1‑92 (MQ=21)
tAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCAc < 1:5760268/93‑1 (MQ=21)
aGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACg > 2:2592501/1‑93 (MQ=21)
ggCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGc > 1:3313081/1‑93 (MQ=21)
gCCGGATAAGGCGCTCGCTC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCt > 2:5807059/1‑93 (MQ=21)
gCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCt < 1:5958920/93‑1 (MQ=21)
gCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCt > 2:4947831/1‑93 (MQ=21)
ccGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCtt > 1:1226311/1‑93 (MQ=21)
cGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCttt > 1:75365/1‑93 (MQ=21)
ggATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTa < 1:637820/93‑1 (MQ=21)
gATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTac > 2:5478041/1‑93 (MQ=21)
aTAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTaca < 2:5059182/93‑1 (MQ=25)
aTAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTaca > 2:3163521/1‑93 (MQ=25)
aaGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACAcc < 2:4594642/93‑1 (MQ=25)
aaGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACAcc > 2:4451940/1‑93 (MQ=25)
aaGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACAcc < 2:3276097/93‑1 (MQ=25)
|
GCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCG‑‑G‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCG > NC_000913/4448454‑4448623
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
