Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
A1 F1 I1 R1
|
647 |
270.1 |
21258240 |
98.4% |
20918108 |
94.0 |
Breseq alignment
BRESEQ :: Evidence
|
evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
RA |
NC_000913 |
860,895 |
G→A |
A312V (GCC→GTC) |
ybiW ← |
putative formate acetyltransferase |
|
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
* | NC_000913 | 860,895 | 0 | G | A | 100.0%
| 1006.7
/ NA
| 268 | A312V (GCC→GTC) | ybiW | putative formate acetyltransferase |
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (140/128); total (140/128) |
Only 100 of 283 total aligned reads displayed.
CGGACTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGGCGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAACGATACTGAGT > NC_000913/860804‑860985
|
ggACTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACgt > 1:8624434/1‑94 (MQ=255)
aCTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACgtgt > 2:6498154/1‑94 (MQ=255)
cTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGtt < 2:3652893/94‑1 (MQ=255)
ttCCCGCAGAGGCTTTTGAGTGTCAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTc < 1:5814649/94‑1 (MQ=255)
tCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCAGCTCGATGACGTGTTcg < 1:7379149/94‑1 (MQ=255)
ccGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTcgcg > 1:6499723/1‑94 (MQ=255)
cGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGa > 2:6095418/1‑94 (MQ=255)
cGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGa > 1:3989491/1‑94 (MQ=255)
cGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGa > 1:3276686/1‑94 (MQ=255)
gCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGAt > 1:283509/1‑94 (MQ=255)
cAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATc > 1:51874/1‑94 (MQ=255)
agagGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATcc > 1:1497856/1‑94 (MQ=255)
agagGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATcc < 1:7606477/94‑1 (MQ=255)
gagGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCa < 2:191498/94‑1 (MQ=255)
agGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAg > 2:2398782/1‑94 (MQ=255)
agGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAg < 1:1766899/94‑1 (MQ=255)
agGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAg < 2:4277374/94‑1 (MQ=255)
ggCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGc < 2:2650023/94‑1 (MQ=255)
ggCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGc < 1:3869628/94‑1 (MQ=255)
cTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGt < 2:9429595/94‑1 (MQ=255)
cTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGt > 1:5371682/1‑94 (MQ=255)
ttttGAGTGTGAGCCGGAGCGGATCTTGTTCCCTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTc < 2:4110058/94‑1 (MQ=255)
ttttGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTc > 2:9626781/1‑94 (MQ=255)
ttGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTg < 1:6766452/94‑1 (MQ=255)
aGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGtt < 1:10008456/94‑1 (MQ=255)
gtgtGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTg < 1:8142547/94‑1 (MQ=255)
gtgAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAg > 1:2046366/1‑94 (MQ=255)
gtgAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAg > 2:7272119/1‑94 (MQ=255)
tgAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGt < 2:1078940/94‑1 (MQ=255)
gAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGtt < 2:3909743/94‑1 (MQ=255)
gCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCa > 1:9941798/1‑94 (MQ=255)
cGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAAc < 2:9026824/94‑1 (MQ=255)
ggAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACg < 1:5763239/94‑1 (MQ=255)
ggAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACg < 2:10607577/94‑1 (MQ=255)
ggAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACg > 2:2722462/1‑94 (MQ=255)
cgAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACg < 2:470990/93‑1 (MQ=255)
gAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGt < 1:9314966/94‑1 (MQ=255)
aGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTc < 2:5123087/94‑1 (MQ=255)
gCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTcg > 2:6819039/1‑94 (MQ=255)
gCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTcg < 2:7729140/94‑1 (MQ=255)
gggATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTcgc < 1:5607842/93‑1 (MQ=255)
ggATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTcgcg > 2:8878060/1‑94 (MQ=255)
aTCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCgcggc > 2:8252800/1‑94 (MQ=255)
aTCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCgcggc > 2:5694810/1‑94 (MQ=255)
tCTTTTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCgcggcg < 1:2919285/94‑1 (MQ=255)
cTTGTTCCCTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGa < 1:9107954/94‑1 (MQ=255)
cTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGa < 1:1148943/94‑1 (MQ=255)
cTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGa > 2:10435000/1‑94 (MQ=255)
ttGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGAt > 2:7531399/1‑94 (MQ=255)
tGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATa < 2:4780493/94‑1 (MQ=255)
tGTTCACTCCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATa < 1:464601/94‑1 (MQ=255)
gTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAg > 1:7974145/1‑94 (MQ=255)
ttCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGt > 2:5446838/1‑94 (MQ=255)
ttCACTCCCAGAAGTTTCAGCGAGAAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGt < 1:10294899/94‑1 (MQ=255)
tCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTa > 2:8809847/1‑94 (MQ=255)
cACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTAc > 2:637617/1‑94 (MQ=255)
aCTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACg < 2:4366174/94‑1 (MQ=255)
cTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACgg < 1:8251158/94‑1 (MQ=255)
cTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACgg > 2:2808223/1‑94 (MQ=255)
cTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACgg < 2:2997803/94‑1 (MQ=255)
cTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACgg > 1:4404505/1‑94 (MQ=255)
cTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACgg > 1:336972/1‑94 (MQ=255)
tCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACggga > 2:9238138/1‑93 (MQ=255)
ccAGCAGGTTCAGCCAGCAGCTATGCAGCATCTGGATGACGTGTGCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTa < 1:10207890/94‑1 (MQ=255)
cagcagTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTag > 1:9495929/1‑94 (MQ=255)
cagcagTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTag < 1:6039918/94‑1 (MQ=255)
agcagTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTaga > 2:2326630/1‑94 (MQ=255)
cagTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAgaga > 2:1333405/1‑94 (MQ=255)
agTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAgagaa > 2:443535/1‑93 (MQ=255)
agTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGAt < 1:1016124/94‑1 (MQ=255)
agTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGAt < 2:3191807/94‑1 (MQ=255)
agTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGAt > 1:7176617/1‑94 (MQ=255)
gTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGGTGAGTTCAACGTCGCGGCGATAGTACGGGGAGAGATa > 1:6378554/1‑94 (MQ=255)
tttCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATAc < 1:6158031/94‑1 (MQ=255)
ttCAGCCAGCAGCTCTGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACt < 2:164689/94‑1 (MQ=255)
cagccagcAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTgg > 2:3044899/1‑94 (MQ=255)
ccagcAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTcc < 2:6194453/94‑1 (MQ=255)
ccagcAGCTATGCAGCATCTCGATGACGTGTGCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTcc < 1:3715792/94‑1 (MQ=255)
agcagcTCTGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCAt < 2:3793245/94‑1 (MQ=255)
agcagcTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCAt > 2:3559658/1‑94 (MQ=255)
agcagcTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCAt < 1:1322866/94‑1 (MQ=255)
agcagcTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCAt < 1:4797258/94‑1 (MQ=255)
agcagcTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCAt < 1:482777/94‑1 (MQ=255)
agcagcTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCAt < 1:7137215/94‑1 (MQ=255)
agcTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTAGCGGCGATAGTACGGGTAGAGATACTGGTCCATACg < 1:2598570/94‑1 (MQ=255)
cTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGAc < 1:9899558/94‑1 (MQ=255)
tATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGAcc < 2:8018885/94‑1 (MQ=255)
aTGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCa > 1:3820298/1‑94 (MQ=255)
gcagcaTCTCGATGACGTTTGCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCaaa < 2:1538211/94‑1 (MQ=255)
gcagcaTCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCaaa > 2:7058657/1‑94 (MQ=255)
cagcaTCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCCAAc > 1:845764/1‑94 (MQ=255)
cagcaTCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAAc < 2:10044594/94‑1 (MQ=255)
cagcaTCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAAc < 2:3403235/94‑1 (MQ=255)
agcaTCTCGATGACTGGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAACg < 2:5926271/94‑1 (MQ=255)
aTCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAACGATa > 1:8746124/1‑94 (MQ=255)
actcGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTCCGGGTAGAGATACTGGTCCATACGACCAAACGacac < 2:2171784/93‑1 (MQ=255)
tcGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTAGTCCATACGACCAAACGATACTg > 1:2272983/1‑94 (MQ=255)
ccGATGACGTGTGCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAACGATACTg < 1:10573264/93‑1 (MQ=255)
cGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAACGATACTGa > 1:4318163/1‑94 (MQ=255)
aTGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAACGATACTGAGt > 2:496837/1‑94 (MQ=255)
|
CGGACTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGGCGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAACGATACTGAGT > NC_000913/860804‑860985
|
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGCGGACTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGGCGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAACGATACTGAGTG > NC_000913/860802‑860986
|
AGCGGACTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGA < SRR4302545.8753949/94‑1 (MQ=60)
AGCGGACTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGA < SRR4302545.8753950/94‑1 (MQ=60)
AGCGGACTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGA > SRR4302545.5905764/1‑94 (MQ=60)
AGCGGACTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGA > SRR4302545.5170660/1‑94 (MQ=60)
AGCGGACTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGA > SRR4302545.2883945/1‑94 (MQ=60)
AGCGGACTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGA > SRR4302545.4400241/1‑94 (MQ=60)
GCGGACTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGAC < SRR4302545.8504127/94‑1 (MQ=60)
GCGGACTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGAC > SRR4302545.5432857/1‑94 (MQ=60)
GCGGACTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGAC < SRR4302545.10396448/94‑1 (MQ=60)
TGGACTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACG > SRR4302545.4779611/1‑94 (MQ=60)
CGGACTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACG < SRR4302545.6596389/94‑1 (MQ=60)
CGGACTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACG > SRR4302545.7863178/1‑94 (MQ=60)
GGACTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGT > SRR4302545.8874338/1‑94 (MQ=60)
GGACTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGT < SRR4302545.4861567/94‑1 (MQ=60)
GGACTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGT > SRR4302545.376933/1‑94 (MQ=60)
GACTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTG > SRR4302545.4932970/1‑94 (MQ=60)
GACTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTG > SRR4302545.5081051/1‑94 (MQ=60)
ACTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGT < SRR4302545.5545642/94‑1 (MQ=60)
ACTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGT < SRR4302545.1144550/94‑1 (MQ=60)
CTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTT > SRR4302545.5945011/1‑94 (MQ=60)
CTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTT > SRR4302545.10019079/1‑94 (MQ=60)
TTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTC < SRR4302545.298574/94‑1 (MQ=60)
TTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGCTTCACCCAGCAGCTATGCAGCATCTCGATGACGTGTTC > SRR4302545.9517236/1‑94 (MQ=60)
TTCCCGCAGAGGCTTTTGAGTGTCAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTC < SRR4302545.5971093/94‑1 (MQ=60)
TCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCG > SRR4302545.4163972/1‑94 (MQ=60)
TCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCAGCTCGATGACGTGTTCG < SRR4302545.7587260/94‑1 (MQ=60)
CCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTGCGC > SRR4302545.4179013/1‑94 (MQ=60)
CCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCG > SRR4302545.6677424/1‑94 (MQ=60)
CCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCG > SRR4302545.6677425/1‑94 (MQ=60)
CCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCG > SRR4302545.4709814/1‑94 (MQ=60)
CCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCG > SRR4302545.8451090/1‑94 (MQ=60)
CGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGA > SRR4302545.4089283/1‑94 (MQ=60)
CGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGA > SRR4302545.3356996/1‑94 (MQ=60)
GCAGTGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGAT > SRR4302545.6445347/1‑94 (MQ=60)
GCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGAT > SRR4302545.6445031/1‑94 (MQ=60)
GCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGAT > SRR4302545.289435/1‑94 (MQ=60)
CAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATC > SRR4302545.53057/1‑94 (MQ=60)
AGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCC < SRR4302545.5423771/94‑1 (MQ=60)
AGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCC > SRR4302545.1532506/1‑94 (MQ=60)
AGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCC > SRR4302545.7510322/1‑94 (MQ=60)
AGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCC < SRR4302545.7821642/94‑1 (MQ=60)
GAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCA < SRR4302545.5476293/94‑1 (MQ=60)
AGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAG < SRR4302545.1809237/94‑1 (MQ=60)
AGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAG > SRR4302545.3943389/1‑94 (MQ=60)
GGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGC > SRR4302545.1089665/1‑94 (MQ=60)
GGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGC < SRR4302545.3966219/94‑1 (MQ=60)
GCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCG > SRR4302545.9016100/1‑94 (MQ=60)
GCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCG < SRR4302545.9725085/94‑1 (MQ=60)
GCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCG > SRR4302545.580314/1‑94 (MQ=60)
GCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTCTTCGCGATCCGGCG > SRR4302545.2205710/1‑94 (MQ=60)
CTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGT > SRR4302545.5511357/1‑94 (MQ=60)
TTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTG < SRR4302545.6952027/94‑1 (MQ=60)
AGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTT < SRR4302545.10305158/94‑1 (MQ=60)
GTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATGCAGCGTCTGGTCG > SRR4302545.3828512/1‑94 (MQ=60)
GTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTG < SRR4302545.8377791/94‑1 (MQ=60)
GTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTG < SRR4302545.8377792/94‑1 (MQ=60)
TGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGA > SRR4302545.10522809/1‑94 (MQ=60)
TGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGA > SRR4302545.2202179/1‑94 (MQ=60)
GTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAG > SRR4302545.2096801/1‑94 (MQ=60)
TGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGT > SRR4302545.20393/1‑94 (MQ=60)
GAGCCGGAGCGGATCTTTTTCACTTCCATCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTT < SRR4302545.6941231/94‑1 (MQ=60)
GAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTT < SRR4302545.6941230/94‑1 (MQ=60)
GAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTGCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTT < SRR4302545.6009498/94‑1 (MQ=60)
AGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTC < SRR4302545.2903008/94‑1 (MQ=60)
AGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTC < SRR4302545.4488706/94‑1 (MQ=60)
GCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCA > SRR4302545.10236931/1‑94 (MQ=60)
GCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCA < SRR4302545.309591/94‑1 (MQ=60)
CGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAAC > SRR4302545.5218171/1‑94 (MQ=60)
CGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAAC > SRR4302545.7939845/1‑94 (MQ=60)
CGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAAC < SRR4302545.10674773/94‑1 (MQ=60)
GGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACG > SRR4302545.2336408/1‑94 (MQ=60)
GGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACG < SRR4302545.5918062/94‑1 (MQ=60)
GGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACG > SRR4302545.8377295/1‑94 (MQ=60)
GGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACG > SRR4302545.7141634/1‑94 (MQ=60)
GAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGT < SRR4302545.9588070/94‑1 (MQ=60)
GAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGT > SRR4302545.3997730/1‑94 (MQ=60)
GGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGC < SRR4302545.5756689/94‑1 (MQ=60)
GGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCG > SRR4302545.5697791/1‑94 (MQ=60)
GGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCG < SRR4302545.2912747/94‑1 (MQ=60)
ATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGC < SRR4302545.5807609/94‑1 (MQ=60)
ATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGC < SRR4302545.8228452/94‑1 (MQ=60)
TCTTTTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCG < SRR4302545.2990136/94‑1 (MQ=60)
TCTTGTTCGCTTCGAGCAGTTTCAGCCATCAGCTATGCAGCATCTCGATGACGTGTCCGCCATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCG < SRR4302545.2990135/94‑1 (MQ=60)
TCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCG < SRR4302545.8838053/94‑1 (MQ=60)
TCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCAATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCG < SRR4302545.5948911/94‑1 (MQ=60)
CTTGTTCCCTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGA < SRR4302545.9375055/94‑1 (MQ=60)
CTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGA < SRR4302545.1174127/94‑1 (MQ=60)
CTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCAGGTTGAGTTCAACGTCGCGGCGA > SRR4302545.7774441/1‑94 (MQ=60)
TTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGAT > SRR4302545.2406416/1‑94 (MQ=60)
TGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATA < SRR4302545.3887176/94‑1 (MQ=60)
TGTTCACTTCCAGCAGTTGCAGCCAGCAGCTATGCAGCATCAACAGGACGTGTTCGCGATCCAGCCTCTGGTTGAGTTCAACGTCGCGGCGATA < SRR4302545.5596788/94‑1 (MQ=60)
TGTTCACTCCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATA < SRR4302545.474967/94‑1 (MQ=60)
GTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAG > SRR4302545.8200864/1‑94 (MQ=60)
TTCACTCCCAGAAGTTTCAGCGAGAAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGT < SRR4302545.10598497/94‑1 (MQ=60)
CACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTAC < SRR4302545.4760129/94‑1 (MQ=60)
CACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTAC < SRR4302545.10197452/94‑1 (MQ=60)
ACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACG > SRR4302545.618682/1‑94 (MQ=60)
ACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACG > SRR4302545.143075/1‑94 (MQ=60)
TTTCCAGCAGTTTCAGCCAGCATCTAGGCAGCCTCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGG < SRR4302545.2755185/94‑1 (MQ=60)
CTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGG > SRR4302545.344154/1‑94 (MQ=60)
CTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGG > SRR4302545.4516277/1‑94 (MQ=60)
CTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGG < SRR4302545.8490016/94‑1 (MQ=60)
CTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGG > SRR4302545.1293031/1‑94 (MQ=60)
CCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTA < SRR4302545.10509401/94‑1 (MQ=60)
CCAGCAGGTTCAGCCAGCAGCTATGCAGCATCTGGATGACGTGTGCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTA < SRR4302545.10509402/94‑1 (MQ=60)
CAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAG > SRR4302545.9775439/1‑94 (MQ=60)
CAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAG < SRR4302545.6203279/94‑1 (MQ=60)
CAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGGAG > SRR4302545.10595567/1‑94 (MQ=60)
AGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGAT > SRR4302545.1756558/1‑94 (MQ=60)
AGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGAT < SRR4302545.1038532/94‑1 (MQ=60)
AGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGAT > SRR4302545.9373325/1‑94 (MQ=60)
AGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGAT > SRR4302545.7376019/1‑94 (MQ=60)
AGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGAT > SRR4302545.7115860/1‑94 (MQ=60)
AGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGGAGAGAT > SRR4302545.1609549/1‑94 (MQ=60)
AGTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGCAGAGAT > SRR4302545.7349159/1‑94 (MQ=60)
GTTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGGTGAGTTCAACGTCGCGGCGATAGTACGGGGAGAGATA > SRR4302545.6552938/1‑94 (MQ=60)
TTTCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATAC < SRR4302545.6325607/94‑1 (MQ=60)
TCAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTG < SRR4302545.1020621/94‑1 (MQ=60)
CAGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGG < SRR4302545.8913492/94‑1 (MQ=60)
AGCCAGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGG > SRR4302545.9587507/1‑94 (MQ=60)
CCAGCAGCTATGCAGCATCTCGATGACGTGTGCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCC < SRR4302545.3807023/94‑1 (MQ=60)
AGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCTAT < SRR4302545.8577688/94‑1 (MQ=60)
AGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCAT < SRR4302545.493551/94‑1 (MQ=60)
AGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCAT < SRR4302545.4919936/94‑1 (MQ=60)
AGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCAT < SRR4302545.1352271/94‑1 (MQ=60)
AGCAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCAT < SRR4302545.7335186/94‑1 (MQ=60)
CAGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATAC > SRR4302545.10485650/1‑94 (MQ=60)
AGCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTAGCGGCGATAGTACGGGTAGAGATACTGGTCCATACG < SRR4302545.2661121/94‑1 (MQ=60)
GCTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGA > SRR4302545.3803298/1‑94 (MQ=60)
CTATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGAC < SRR4302545.10193663/94‑1 (MQ=60)
ATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCA > SRR4302545.3915370/1‑94 (MQ=60)
ATGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGGAGAGATACTGGTCCATACGACCA > SRR4302545.7816483/1‑94 (MQ=60)
TGCAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAA > SRR4302545.8790683/1‑94 (MQ=60)
CAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCCAAC > SRR4302545.864733/1‑94 (MQ=60)
CAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAAC < SRR4302545.10268639/94‑1 (MQ=60)
CAGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAAC < SRR4302545.4502789/94‑1 (MQ=60)
AGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAACG > SRR4302545.6308195/1‑94 (MQ=60)
AGCATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAACG > SRR4302545.3419820/1‑94 (MQ=60)
CTCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAACGATA < SRR4302545.8911148/94‑1 (MQ=60)
ATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAACGATA > SRR4302545.10201073/1‑94 (MQ=60)
ATCTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAACGATA > SRR4302545.9000014/1‑94 (MQ=60)
CTCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAACGATACT > SRR4302545.1525356/1‑94 (MQ=60)
TCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAACGATACTG > SRR4302545.4026525/1‑94 (MQ=60)
TCGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTAGTCCATACGACCAAACGATACTG > SRR4302545.2328254/1‑94 (MQ=60)
TCCATGACGTGTTCGCGATCCAGCGTCTGGTTTAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGGCCATACGACCAAACCATACTG < SRR4302545.5361767/94‑1 (MQ=60)
CCGATGACGTGTGCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAACGATACTG < SRR4302545.10884715/94‑1 (MQ=60)
CGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAACGATACTGA > SRR4302545.3366113/1‑94 (MQ=60)
CGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAACGATACTGA > SRR4302545.4426979/1‑94 (MQ=60)
CGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAACGATACTGA < SRR4302545.18739/94‑1 (MQ=60)
CGATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGGAGAGATACTGGTCCATACGACCAAACGATACTGA > SRR4302545.745597/1‑94 (MQ=60)
GATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAACGATACTGAG < SRR4302545.9763127/94‑1 (MQ=60)
ATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAACGATACTGAGT > SRR4302545.10310999/1‑94 (MQ=60)
ATGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAACGATACTGAGT < SRR4302545.10714019/94‑1 (MQ=60)
TGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAACGATACTGAGTG < SRR4302545.5052926/94‑1 (MQ=60)
TGACGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAACGATACTGAGTG < SRR4302545.6166490/94‑1 (MQ=60)
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AGCGGACTTCCCGCAGAGGCTTTTGAGTGTGAGCCGGAGCGGATCTTGTTCACTTCCAGCAGTTTCAGCCAGCAGCTATGCAGCATCTCGATGGCGTGTTCGCGATCCAGCGTCTGGTTGAGTTCAACGTCGCGGCGATAGTACGGGTAGAGATACTGGTCCATACGACCAAACGATACTGAGTG > NC_000913/860802‑860986
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Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |