Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,838,055 Δ1 bp coding (509/1458 nt) ascF → PTS system enzyme IIBC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,838,0550G.99.7% 1599.5 / ‑2.7 354coding (509/1458 nt)ascFPTS system enzyme IIBC
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base . (154/198);  total (156/198)
Fisher's exact test for biased strand distribution p-value = 4.39e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 371 total aligned reads displayed.

ACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGCATCTGCCGCGCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAGCG  >  NC_000913/2837967‑2838143
                                                                                         |                                                                                        
aCAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCa                                                                                     <  1:9126672/94‑1 (MQ=255)
aCAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCa                                                                                     <  2:4338855/94‑1 (MQ=255)
aCAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCa                                                                                     <  2:175255/94‑1 (MQ=255)
 cAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCaa                                                                                    <  2:8234706/94‑1 (MQ=255)
 cAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCaa                                                                                    <  1:4578668/94‑1 (MQ=255)
 cAAAAGGATCGCCGACCTTAACCATTCTGAATGAGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCaa                                                                                    <  2:10195310/94‑1 (MQ=255)
  aaaaGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCaaa                                                                                   <  2:128712/94‑1 (MQ=255)
  aaaaGGATAGCCGACCTTAAACATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGACGCCATCaaa                                                                                   >  1:1429829/1‑94 (MQ=255)
   aaaGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAAt                                                                                  >  1:2346722/1‑94 (MQ=255)
   aaaGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAAt                                                                                  <  2:4107114/94‑1 (MQ=255)
    aaGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAAtt                                                                                 >  2:1890513/1‑94 (MQ=255)
     aGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAAttt                                                                                >  2:9770425/1‑94 (MQ=255)
     aGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAAttt                                                                                <  1:283422/94‑1 (MQ=255)
      ggATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTa                                                                               <  2:6168049/94‑1 (MQ=255)
       gATCGCCAGCCTTAGCCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTaa                                                                              <  1:5071995/94‑1 (MQ=255)
        aTCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTaaa                                                                             <  2:7474200/94‑1 (MQ=255)
           gCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAAcc                                                                          <  2:4262637/94‑1 (MQ=255)
            ccGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCa                                                                         >  2:8551203/1‑94 (MQ=255)
              gACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAat                                                                       >  1:757949/1‑94 (MQ=255)
              gACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAat                                                                       >  2:4549517/1‑94 (MQ=255)
              caCCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAat                                                                       <  1:2072157/93‑1 (MQ=255)
               aCCTTATCCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAata                                                                      <  1:309816/94‑1 (MQ=255)
               aCCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAata                                                                      <  1:7180096/94‑1 (MQ=255)
               aCCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAata                                                                      >  1:4946901/1‑94 (MQ=255)
                ccTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAatat                                                                     <  1:4366516/94‑1 (MQ=255)
                ccTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAatat                                                                     >  2:4895959/1‑94 (MQ=255)
                ccTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAatat                                                                     <  2:2972029/94‑1 (MQ=255)
                ccTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAatat                                                                     <  2:4731136/94‑1 (MQ=255)
                 cTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAatatt                                                                    >  2:10317765/1‑93 (MQ=255)
                 cTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATg                                                                    <  2:1112090/94‑1 (MQ=255)
                  ttAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGt                                                                   <  2:8889672/94‑1 (MQ=255)
                  ttAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGt                                                                   <  2:9825271/94‑1 (MQ=255)
                  ttAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGt                                                                   >  1:8623179/1‑94 (MQ=255)
                   tAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTc                                                                  >  1:7011243/1‑94 (MQ=255)
                   tAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTc                                                                  <  2:3445956/94‑1 (MQ=255)
                    aaCCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCg                                                                 <  2:6639687/94‑1 (MQ=255)
                    aaCCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCg                                                                 >  1:10255451/1‑94 (MQ=255)
                    aaCCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCg                                                                 <  1:7271722/94‑1 (MQ=255)
                     aCCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGc                                                                <  2:4599186/94‑1 (MQ=255)
                      ccATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCt                                                               >  1:6260349/1‑94 (MQ=255)
                       cATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTg                                                              <  2:2456458/94‑1 (MQ=255)
                       cATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTg                                                              <  1:962660/94‑1 (MQ=255)
                         ttCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGc                                                            >  1:1145224/1‑94 (MQ=255)
                          tCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCg                                                           >  1:5252127/1‑94 (MQ=255)
                            tGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTTTCGAt                                                         >  1:7767657/1‑94 (MQ=255)
                             gAATGTGATTGGTGCCGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGAtt                                                        <  1:6654518/94‑1 (MQ=255)
                             gAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGAtt                                                        <  1:8071483/94‑1 (MQ=255)
                              aaTGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTg                                                       <  2:2141607/94‑1 (MQ=255)
                               aTGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGc                                                      >  1:299438/1‑94 (MQ=255)
                                tgtgATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGcc                                                     >  1:9995005/1‑94 (MQ=255)
                                   gATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATc                                                  <  2:6903211/94‑1 (MQ=255)
                                   gATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATc                                                  <  1:543024/94‑1 (MQ=255)
                                    aTTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATcg                                                 <  1:1620342/94‑1 (MQ=255)
                                    aTTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATcg                                                 >  2:3260815/1‑94 (MQ=255)
                                        gTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCggg                                             >  1:6102570/1‑94 (MQ=255)
                                        gTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCggg                                             <  1:7949476/94‑1 (MQ=255)
                                         tGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGgt                                            <  2:7004809/94‑1 (MQ=255)
                                         tGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGgt                                            <  2:7217305/94‑1 (MQ=255)
                                         tGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGgt                                            >  2:7432374/1‑94 (MQ=255)
                                         tGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCCCTCGCGATTGCCATCGCGGgt                                            >  2:5515076/1‑94 (MQ=255)
                                         tGACGGTGCTTTCTTCTCCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGgt                                            <  1:3880290/94‑1 (MQ=255)
                                          gACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGgtg                                           >  2:3168064/1‑94 (MQ=255)
                                             ggTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGGGTGc                                        >  1:3955614/1‑94 (MQ=255)
                                               tGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTg                                      >  1:10035044/1‑94 (MQ=255)
                                                gCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTgg                                     <  2:3991973/94‑1 (MQ=255)
                                                 cTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGt                                    >  2:1466829/1‑94 (MQ=255)
                                                        cttcCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCg                             >  1:2453729/1‑94 (MQ=255)
                                                         ttcCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGa                            >  2:7767535/1‑94 (MQ=255)
                                                           ccTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGt                          <  2:5885418/94‑1 (MQ=255)
                                                              gCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGtttt                       <  2:6286158/94‑1 (MQ=255)
                                                               ccGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTa                      <  2:2842593/94‑1 (MQ=255)
                                                               ccGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTa                      >  1:879958/1‑94 (MQ=255)
                                                                cGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTAt                     >  2:5063305/1‑94 (MQ=255)
                                                                 gCTGATGGTCGCGGCATCTGCCGTCATCAAATCTAAAACCAACATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGCTCAGCCGAGTTTGAtg                    >  2:9396745/1‑93 (MQ=255)
                                                                  cTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTg                   >  1:8393271/1‑94 (MQ=255)
                                                                  cTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTg                   >  1:1757095/1‑94 (MQ=255)
                                                                   tGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGa                  <  1:3319818/94‑1 (MQ=255)
                                                                     aTGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAAc                <  1:4208223/94‑1 (MQ=255)
                                                                      tGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACt               <  2:2582478/94‑1 (MQ=255)
                                                                       ggTCGCGGCATCTGCCGCCATCAAATTTAAAGCCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTg              <  1:9492883/94‑1 (MQ=255)
                                                                       ggTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTg              <  1:809364/94‑1 (MQ=255)
                                                                        gTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTGCATCCGAGTTTTATTGAACTGa             <  1:1244323/94‑1 (MQ=255)
                                                                          cgcggcATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATg           >  1:3594388/5‑94 (MQ=255)
                                                                          cgcggcATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATg           <  2:7952621/90‑1 (MQ=255)
                                                                          cgcggcATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATg           <  2:3842813/90‑1 (MQ=255)
                                                                          cgcggcATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATg           >  2:5194046/5‑94 (MQ=255)
                                                                           gcggcATCTGCCGCGATCACATTTAAACCCAATATGTCGCTGGCGATCGCCCGCGCGGGTGCGCTCGGACATCGGCGTTTTATTGCACTGCTgg          >  2:5611980/4‑94 (MQ=255)
                                                                           gcggcATCTGCCGCCATCAAATTTAAACCCAATATGTCGCGGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGAggg          <  1:4748126/91‑1 (MQ=255)
                                                                           gcggcATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATgg          <  2:6568084/91‑1 (MQ=255)
                                                                           gcggcATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATgg          >  1:5900713/4‑94 (MQ=255)
                                                                            cggcATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGc         >  1:4491484/3‑94 (MQ=255)
                                                                            cggcATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGc         <  2:916155/92‑1 (MQ=255)
                                                                             ggcATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCg        >  1:9297397/2‑94 (MQ=255)
                                                                             ggcATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCg        >  2:2741422/2‑94 (MQ=255)
                                                                              gcATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGa       <  2:2317576/94‑1 (MQ=255)
                                                                               cATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGaa      >  1:10416264/1‑94 (MQ=255)
                                                                                 tCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAg    <  1:2238549/94‑1 (MQ=255)
                                                                                  cTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAGc   <  1:8276114/94‑1 (MQ=255)
                                                                                  cTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAGc   <  1:5493130/94‑1 (MQ=255)
                                                                                   tGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAGCg  >  1:565444/1‑94 (MQ=255)
                                                                                         |                                                                                        
ACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGCATCTGCCGCGCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAGCG  >  NC_000913/2837967‑2838143

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 206 total aligned reads displayed.
GCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGCATCTGCCGCGCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAGCGGCCCA  >  NC_000913/2837963‑2838148
                                                                                              |                                                                                             
GCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCC                                                                                               <  SRR4302545.316963/94‑1 (MQ=60)
  TGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCTCTGATGGTCGCGGCATCTGCCGCCAT                                                                                            <  SRR4302545.8115887/94‑1 (MQ=60)
  TGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCAT                                                                                            <  SRR4302545.7754393/94‑1 (MQ=60)
   GACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATC                                                                                           >  SRR4302545.9886494/1‑94 (MQ=60)
   GACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATC                                                                                           <  SRR4302545.6400770/94‑1 (MQ=60)
    ACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCA                                                                                          <  SRR4302545.4118878/94‑1 (MQ=60)
    ACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCA                                                                                          <  SRR4302545.9394551/94‑1 (MQ=60)
    ACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCA                                                                                          >  SRR4302545.4802833/1‑94 (MQ=60)
    ACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCA                                                                                          <  SRR4302545.2397971/94‑1 (MQ=60)
    ACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCA                                                                                          >  SRR4302545.4802831/1‑94 (MQ=60)
     CAAAAGGATCTCCGACCTTAACCATTCTGAATGTGATTGGTTACTGTGGTTTCTTCTTCCTCCCGCTGATGGTCGGGGCATCTGCCGCCATCAA                                                                                         >  SRR4302545.9037385/1‑94 (MQ=55)
     CAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAA                                                                                         <  SRR4302545.4696009/94‑1 (MQ=60)
     CAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAA                                                                                         >  SRR4302545.5262031/1‑94 (MQ=60)
      AAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAA                                                                                        >  SRR4302545.5409161/1‑94 (MQ=60)
      AAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAA                                                                                        >  SRR4302545.7237897/1‑94 (MQ=60)
      AAAAGGATAGCCGACCTTAAACATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGACGCCATCAAA                                                                                        >  SRR4302545.1462265/1‑94 (MQ=60)
       AAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAAT                                                                                       >  SRR4302545.10897023/1‑94 (MQ=60)
       AAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAAT                                                                                       >  SRR4302545.2403835/1‑94 (MQ=60)
       AAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAAT                                                                                       >  SRR4302545.92549/1‑94 (MQ=60)
        AAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATT                                                                                      <  SRR4302545.10453918/94‑1 (MQ=60)
         AGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTT                                                                                     <  SRR4302545.289348/94‑1 (MQ=60)
          GGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTCCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTA                                                                                    <  SRR4302545.857552/94‑1 (MQ=60)
           GATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAA                                                                                   <  SRR4302545.4926065/94‑1 (MQ=60)
           GATCGCCAGCCTTAGCCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAA                                                                                   <  SRR4302545.5201221/94‑1 (MQ=60)
            ATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAA                                                                                  <  SRR4302545.7116227/94‑1 (MQ=60)
            ATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAA                                                                                  >  SRR4302545.6343397/1‑94 (MQ=60)
               GCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACC                                                                               >  SRR4302545.6663461/1‑94 (MQ=60)
                CCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCA                                                                              >  SRR4302545.8767968/1‑94 (MQ=60)
                 CGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAA                                                                             >  SRR4302545.1842991/1‑94 (MQ=60)
                  GACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAAT                                                                            >  SRR4302545.3876450/1‑94 (MQ=60)
                  GACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAAT                                                                            >  SRR4302545.775001/1‑94 (MQ=60)
                  GACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAAT                                                                            >  SRR4302545.7420829/1‑94 (MQ=60)
                  GACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAAT                                                                            >  SRR4302545.5639959/1‑94 (MQ=60)
                  CACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAAT                                                                            <  SRR4302545.2123163/94‑1 (MQ=60)
                   ACCTTATCCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATA                                                                           <  SRR4302545.316366/94‑1 (MQ=60)
                   ACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATA                                                                           >  SRR4302545.5072276/1‑94 (MQ=60)
                   ACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATA                                                                           >  SRR4302545.2199294/1‑94 (MQ=60)
                   ACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATA                                                                           <  SRR4302545.7379672/94‑1 (MQ=60)
                    CCTTACCCACTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATAT                                                                          <  SRR4302545.4476906/94‑1 (MQ=60)
                    CCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATAT                                                                          <  SRR4302545.1888066/94‑1 (MQ=60)
                    CCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATAT                                                                          <  SRR4302545.8169336/94‑1 (MQ=60)
                    CCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATAT                                                                          <  SRR4302545.961258/94‑1 (MQ=60)
                    CCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATAT                                                                          <  SRR4302545.4476907/94‑1 (MQ=60)
                    CCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATAC                                                                          <  SRR4302545.2427654/94‑1 (MQ=60)
                     CTTAACCATTCTGAAGGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATG                                                                         <  SRR4302545.9458501/94‑1 (MQ=60)
                      TTACCCATTCTGAATGTGATTGGTGACGGTTCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGT                                                                        <  SRR4302545.2208647/94‑1 (MQ=60)
                      TTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGTTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGT                                                                        <  SRR4302545.1721360/94‑1 (MQ=60)
                      TTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGT                                                                        >  SRR4302545.8872991/1‑94 (MQ=60)
                      TTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGT                                                                        <  SRR4302545.10160128/94‑1 (MQ=60)
                       TAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTC                                                                       >  SRR4302545.7204705/1‑94 (MQ=60)
                        AACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCG                                                                      >  SRR4302545.2922802/1‑94 (MQ=60)
                        AACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCG                                                                      >  SRR4302545.10558119/1‑94 (MQ=60)
                        AACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCG                                                                      <  SRR4302545.8546254/94‑1 (MQ=60)
                        AACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCG                                                                      <  SRR4302545.7475607/94‑1 (MQ=60)
                        AACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCG                                                                      <  SRR4302545.6453349/94‑1 (MQ=60)
                        AACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCG                                                                      >  SRR4302545.5273179/1‑94 (MQ=60)
                        AACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCG                                                                      <  SRR4302545.3694082/94‑1 (MQ=60)
                         ACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGC                                                                     >  SRR4302545.4642872/1‑94 (MQ=60)
                         ACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGC                                                                     >  SRR4302545.4642871/1‑94 (MQ=60)
                          CCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCT                                                                    >  SRR4302545.6431007/1‑94 (MQ=60)
                          CCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCT                                                                    <  SRR4302545.3985138/94‑1 (MQ=60)
                           CATTCTGATTGTGCTTGGTGACGGTGCTTTCTTCTACCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTG                                                                   <  SRR4302545.10069261/94‑1 (MQ=60)
                           CATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTG                                                                   <  SRR4302545.984267/94‑1 (MQ=60)
                           CATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTG                                                                   <  SRR4302545.7876351/94‑1 (MQ=60)
                            ATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGG                                                                  <  SRR4302545.5891953/94‑1 (MQ=60)
                             TTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGC                                                                 <  SRR4302545.366243/94‑1 (MQ=60)
                             TTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGC                                                                 >  SRR4302545.1170323/1‑94 (MQ=60)
                              TCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCG                                                                >  SRR4302545.5387823/1‑94 (MQ=60)
                                TGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTTTCGAT                                                              >  SRR4302545.7987511/1‑94 (MQ=60)
                                 GAATGTGATTGGTGCCGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATT                                                             <  SRR4302545.6836977/94‑1 (MQ=60)
                                 GAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATT                                                             <  SRR4302545.1472269/94‑1 (MQ=60)
                                 GAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATT                                                             <  SRR4302545.8302768/94‑1 (MQ=60)
                                 GAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATT                                                             <  SRR4302545.205294/94‑1 (MQ=60)
                                  AATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTG                                                            <  SRR4302545.502943/94‑1 (MQ=60)
                                  AATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTG                                                            >  SRR4302545.5228221/1‑94 (MQ=60)
                                  AATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTG                                                            <  SRR4302545.8833905/94‑1 (MQ=60)
                                   ATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGC                                                           >  SRR4302545.305723/1‑94 (MQ=60)
                                    TGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCC                                                          <  SRR4302545.7764269/94‑1 (MQ=60)
                                    TGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCC                                                          >  SRR4302545.10291367/1‑94 (MQ=60)
                                     GTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCA                                                         >  SRR4302545.8578150/1‑94 (MQ=60)
                                     GTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCA                                                         >  SRR4302545.2396855/1‑94 (MQ=60)
                                     GTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCA                                                         >  SRR4302545.2956977/1‑94 (MQ=60)
                                      TGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCAT                                                        <  SRR4302545.10559156/94‑1 (MQ=60)
                                      TGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCAT                                                        >  SRR4302545.318812/1‑94 (MQ=60)
                                      TGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCAT                                                        >  SRR4302545.7626598/1‑94 (MQ=60)
                                      TGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCAT                                                        <  SRR4302545.9775219/94‑1 (MQ=60)
                                       tattatgGACGGTACTTTCTTCTTCCTGCCGCTTATGGTCGCGGCATCTGCCGCAATCAAATTTAAATCCAATATGTCGCTGGCGATTGCCATC                                                       <  SRR4302545.1817925/87‑1 (MQ=60)
                                       GATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATC                                                       <  SRR4302545.555159/94‑1 (MQ=60)
                                       GATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATC                                                       <  SRR4302545.6943139/94‑1 (MQ=60)
                                        GTTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCG                                                      <  SRR4302545.7877728/94‑1 (MQ=60)
                                        ATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCG                                                      <  SRR4302545.1658831/94‑1 (MQ=60)
                                        ATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCG                                                      <  SRR4302545.2784169/94‑1 (MQ=60)
                                        ATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCG                                                      >  SRR4302545.4568232/1‑94 (MQ=60)
                                         TTGTTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGC                                                     <  SRR4302545.8324279/94‑1 (MQ=60)
                                          TGGTGTCGGTGCTGTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCG                                                    <  SRR4302545.8317829/94‑1 (MQ=60)
                                            GTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGG                                                  >  SRR4302545.6268397/1‑94 (MQ=60)
                                            GTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGG                                                  <  SRR4302545.8175366/94‑1 (MQ=60)
                                             TGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGT                                                 <  SRR4302545.1092457/94‑1 (MQ=60)
                                             TGACGGTGCTTTCTTCTCCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGT                                                 <  SRR4302545.3977150/94‑1 (MQ=60)
                                              GACGTTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTG                                                <  SRR4302545.2605386/94‑1 (MQ=60)
                                              GACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTG                                                >  SRR4302545.83750/1‑94 (MQ=60)
                                               ACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGT                                               <  SRR4302545.10644405/94‑1 (MQ=60)
                                                CGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATAgatcagagatcggaagagcgtcgtgtagg                                              >  SRR4302545.1693974/1‑65 (MQ=60)
                                                CGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTG                                              <  SRR4302545.4370615/94‑1 (MQ=60)
                                                 GGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGC                                             <  SRR4302545.6301753/94‑1 (MQ=60)
                                                 GGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGC                                             >  SRR4302545.4801681/1‑94 (MQ=60)
                                                 GGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGC                                             >  SRR4302545.2626746/1‑94 (MQ=60)
                                                 GGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGGGTGC                                             >  SRR4302545.4054473/1‑94 (MQ=60)
                                                   TGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTG                                           >  SRR4302545.10332314/1‑94 (MQ=60)
                                                   TGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTG                                           <  SRR4302545.568366/94‑1 (MQ=60)
                                                   TGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTG                                           <  SRR4302545.8432690/94‑1 (MQ=60)
                                                   TGCTTTCTTCTGCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTG                                           <  SRR4302545.6690696/94‑1 (MQ=60)
                                                     CTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGT                                         <  SRR4302545.356627/94‑1 (MQ=60)
                                                     CTTTCTCCTTCCCCCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGT                                         <  SRR4302545.2720910/94‑1 (MQ=60)
                                                        TCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACA                                      <  SRR4302545.603611/94‑1 (MQ=60)
                                                         CTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACAT                                     >  SRR4302545.1409261/1‑94 (MQ=60)
                                                         CTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACAT                                     >  SRR4302545.1409260/1‑94 (MQ=60)
                                                          TTGTTCCTGCCGCTGATGGTCGCGGCAGCTGCCGCCATCAAATTTAAATCCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATC                                    <  SRR4302545.574782/94‑1 (MQ=60)
                                                          TTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATC                                    <  SRR4302545.6199720/94‑1 (MQ=60)
                                                            CTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCG                                  >  SRR4302545.2513164/1‑94 (MQ=60)
                                                             TTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGA                                 >  SRR4302545.4628399/1‑94 (MQ=60)
                                                             TTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGA                                 >  SRR4302545.122870/1‑94 (MQ=60)
                                                              TCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAG                                <  SRR4302545.5634653/94‑1 (MQ=60)
                                                              TCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAG                                <  SRR4302545.8890669/94‑1 (MQ=60)
                                                               CCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGT                               <  SRR4302545.3055459/94‑1 (MQ=60)
                                                                CTGCCGCTGATGGTCGCGGCATCGGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTGCATCCGAGTT                              <  SRR4302545.7462193/94‑1 (MQ=60)
                                                                CTGCCGCTGATGGTCGCGGCATCGGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTGCATCCGAGTT                              <  SRR4302545.7462192/94‑1 (MQ=60)
                                                                CTCCCGCTGATGGTCGCGGCATGTGCCACCATCAAATTTAAAGCCAATATGTGGCTGGCGATTGCCATCGCAGGTGTGCTGGTACATCCGAGTT                              <  SRR4302545.6139315/94‑1 (MQ=57)
                                                                 CGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGGCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTT                             <  SRR4302545.6143282/94‑1 (MQ=60)
                                                                   CCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTA                           >  SRR4302545.899709/1‑94 (MQ=60)
                                                                    CGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTAT                          <  SRR4302545.1599755/94‑1 (MQ=60)
                                                                    CGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTAT                          >  SRR4302545.4126433/1‑94 (MQ=60)
                                                                    CGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTAT                          >  SRR4302545.7331587/1‑94 (MQ=60)
                                                                    CGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTAT                          >  SRR4302545.8258729/1‑94 (MQ=60)
                                                                     GCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATT                         <  SRR4302545.1635470/94‑1 (MQ=60)
                                                                      CTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTG                        >  SRR4302545.9447748/1‑94 (MQ=60)
                                                                      CTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTG                        <  SRR4302545.1043902/94‑1 (MQ=60)
                                                                      CTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTG                        >  SRR4302545.10816333/1‑94 (MQ=60)
                                                                      CTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTG                        >  SRR4302545.1799138/1‑94 (MQ=60)
                                                                      CTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTG                        >  SRR4302545.8636207/1‑94 (MQ=60)
                                                                       TGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGA                       <  SRR4302545.3400961/94‑1 (MQ=60)
                                                                       TGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGA                       <  SRR4302545.5403806/94‑1 (MQ=60)
                                                                       TGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGCGTGTGCTGGTACATCCGCGGTTTATTGA                       >  SRR4302545.6648708/1‑94 (MQ=60)
                                                                        GCTGGTCGCGGCATCTGGCGCCATCAAATTTAAAACCAATATGTCGCTTGCGATTGCCATCGCGGGTGTGCTGGTACATTCGAGTTTTATTGAA                      >  SRR4302545.5947804/1‑94 (MQ=60)
                                                                        GATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAA                      >  SRR4302545.2433465/1‑94 (MQ=60)
                                                                         ATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTGCATCCGAGTTTTATTGAAC                     <  SRR4302545.8255815/94‑1 (MQ=60)
                                                                         ATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTGCATCCGAGTTTTATTGAAC                     <  SRR4302545.8255814/94‑1 (MQ=60)
                                                                         ATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAAC                     <  SRR4302545.4313301/94‑1 (MQ=60)
                                                                           GGTCGCGGCATCTGCCGCCATCAAATTTAAAGCCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTG                   <  SRR4302545.9772296/94‑1 (MQ=60)
                                                                           GGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTG                   >  SRR4302545.3426752/1‑94 (MQ=60)
                                                                           GGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTG                   <  SRR4302545.9458904/94‑1 (MQ=60)
                                                                           GGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTG                   >  SRR4302545.3999187/1‑94 (MQ=60)
                                                                           GGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTG                   <  SRR4302545.827537/94‑1 (MQ=60)
                                                                            GTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTGCATCCGAGTTTTATTGAACTGA                  <  SRR4302545.1272306/94‑1 (MQ=60)
                                                                             TCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGAT                 <  SRR4302545.3015789/94‑1 (MQ=60)
                                                                              gcccgGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGAT                 <  SRR4302545.7718365/89‑1 (MQ=60)
                                                                              CGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGTTGGCGTTTGCCATCGCGGGTGTGCTGGTACGTCCTTGTTTTTTTGAACTGATG                <  SRR4302545.9044287/94‑1 (MQ=60)
                                                                              CGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATG                <  SRR4302545.3473534/94‑1 (MQ=60)
                                                                              CGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATG                <  SRR4302545.4413577/94‑1 (MQ=60)
                                                                              CGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATG                <  SRR4302545.5982462/94‑1 (MQ=60)
                                                                              CGCGGCATCTGCCGCCATCAAATCTAAAACCAATATGTCGCTGGCGATGGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATG                <  SRR4302545.1232420/94‑1 (MQ=60)
                                                                                gcgGCATCTGCCGCCATCAAATTTAAACCCAATATGTCGCGGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGAGGG               <  SRR4302545.4869380/91‑1 (MQ=60)
                                                                                gcgGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGG               <  SRR4302545.9320699/91‑1 (MQ=60)
                                                                                gcgGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGG               <  SRR4302545.4869381/91‑1 (MQ=60)
                                                                                gcgGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGG               >  SRR4302545.6059781/4‑94 (MQ=60)
                                                                                gcgGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGG               >  SRR4302545.5159175/4‑94 (MQ=60)
                                                                                 cgGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGC              <  SRR4302545.5415990/92‑1 (MQ=60)
                                                                                 cgGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGC              <  SRR4302545.9780825/92‑1 (MQ=60)
                                                                                 cgGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGC              <  SRR4302545.2305934/92‑1 (MQ=60)
                                                                                 cgGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGC              >  SRR4302545.4606256/3‑94 (MQ=60)
                                                                                 GGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCG             >  SRR4302545.9569963/1‑94 (MQ=60)
                                                                                 GGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCG             >  SRR4302545.9569961/1‑94 (MQ=60)
                                                                                 GGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCG             <  SRR4302545.8140106/94‑1 (MQ=60)
                                                                                 GGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCG             >  SRR4302545.394612/1‑94 (MQ=60)
                                                                                  tgctTCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCG             <  SRR4302545.8140105/90‑1 (MQ=60)
                                                                                    CATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAA           >  SRR4302545.9075734/1‑94 (MQ=60)
                                                                                    CATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAA           <  SRR4302545.3167857/94‑1 (MQ=60)
                                                                                    CATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAA           >  SRR4302545.7569229/1‑94 (MQ=60)
                                                                                    CATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAA           >  SRR4302545.10723241/1‑94 (MQ=60)
                                                                                     ATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAA          >  SRR4302545.4229163/1‑94 (MQ=60)
                                                                                      TCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTGCATCCGAGTTTTATTGAACTGATGGCGAAAG         <  SRR4302545.318606/94‑1 (MQ=60)
                                                                                      TCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAG         <  SRR4302545.1456160/94‑1 (MQ=60)
                                                                                      TCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAG         <  SRR4302545.2293111/94‑1 (MQ=60)
                                                                                      TCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAG         <  SRR4302545.3305293/94‑1 (MQ=60)
                                                                                       CTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAGG        >  SRR4302545.8868728/1‑94 (MQ=60)
                                                                                       CTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAGC        <  SRR4302545.5637659/94‑1 (MQ=60)
                                                                                       CTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAGC        <  SRR4302545.3151631/94‑1 (MQ=60)
                                                                                       CTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAGC        >  SRR4302545.10637017/1‑94 (MQ=60)
                                                                                       CTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAGC        <  SRR4302545.8515776/94‑1 (MQ=60)
                                                                                       CTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAGC        <  SRR4302545.5637658/94‑1 (MQ=60)
                                                                                        TGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAGCG       <  SRR4302545.4564855/94‑1 (MQ=60)
                                                                                        TGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAGCG       >  SRR4302545.6970434/1‑94 (MQ=60)
                                                                                        TGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAGCG       >  SRR4302545.578153/1‑94 (MQ=60)
                                                                                          CCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAGCGGC     >  SRR4302545.5098568/1‑94 (MQ=60)
                                                                                           CGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAGCGGCC    >  SRR4302545.9760543/1‑94 (MQ=60)
                                                                                           CGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAGCGGCC    <  SRR4302545.7948655/94‑1 (MQ=60)
                                                                                              CCATCAACTTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGAGTGCTGGTACATCCGAGGTTTATTGAACTGATGGCGTAAGCTGCCCA  >  SRR4302545.3725651/1‑94 (MQ=60)
                                                                                              CCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGGGGGTGTGCTGGTCCAGCCGAGTTTTATTGAACTGATGGCGAcagcgtcgca  >  SRR4302545.8143544/1‑84 (MQ=60)
                                                                                              CCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAGCGGCCCA  <  SRR4302545.5047384/94‑1 (MQ=60)
                                                                                              CCATCAAATTTAAAACCAATATGTCGCTGGAGATTGCCATGGCGGGTGTGACGGTACAACCGACTTTTATTGAACTGAgtgagacaggcgcacg  >  SRR4302545.2532388/1‑78 (MQ=57)
                                                                                              |                                                                                             
GCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGCATCTGCCGCGCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAGCGGCCCA  >  NC_000913/2837963‑2838148

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: