Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,115,116 +C coding (2013/2028 nt) b2974 ← putative endoglucanase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,115,1151.C99.3% 1453.0 / ‑0.5 416coding (2014/2028 nt)b2974putative endoglucanase
Reads supporting (aligned to +/- strand):  ref base . (1/2);  new base C (206/207);  total (207/209)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 459 total aligned reads displayed.

GGTTTGCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCT  >  NC_000913/3115022‑3115203
                                                                                                |                                                                                        
 gTTTGCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTc                                                                                         >  2:5049974/1‑94 (MQ=255)
 gTTTGCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTc                                                                                         <  2:4957088/94‑1 (MQ=255)
  tttGCTGGTATCTGCACGCAGCGGGATTGCATAAGGAACGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTcc                                                                                        >  2:7975872/1‑93 (MQ=255)
   ttGCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTCACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTcct                                                                                       <  2:8153351/94‑3 (MQ=255)
     gCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTcctgc                                                                                     >  1:5356719/1‑90 (MQ=255)
      cTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGGCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTTCTGCg                                                                                     >  1:4146765/1‑94 (MQ=255)
       tGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCgg                                                                                    <  1:10406275/94‑1 (MQ=255)
          tATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATc                                                                                 <  2:6656200/94‑1 (MQ=255)
          tATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATc                                                                                 <  2:1804780/94‑1 (MQ=255)
          tATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATc                                                                                 <  2:1601425/94‑1 (MQ=255)
          tATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATc                                                                                 <  1:9965390/94‑1 (MQ=255)
          tATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATc                                                                                 <  1:7119143/94‑1 (MQ=255)
            tCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCga                                                                               <  1:5188205/94‑1 (MQ=255)
             cTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCgag                                                                              <  1:2212698/94‑1 (MQ=255)
             cTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCgag                                                                              >  1:404351/1‑94 (MQ=255)
                cACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATc                                                                           >  2:10548980/1‑94 (MQ=255)
                 aCGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCg                                                                          <  1:4969277/94‑1 (MQ=255)
                  cGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGc                                                                         >  1:2622256/1‑94 (MQ=255)
                    cAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCa                                                                       <  2:8727878/94‑1 (MQ=255)
                     aGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCAt                                                                      >  1:3424083/1‑94 (MQ=255)
                      gCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATa                                                                     <  2:3768602/94‑1 (MQ=255)
                       cGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAg                                                                    <  1:17699/94‑1 (MQ=255)
                         ggATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAACt                                                                  >  2:1211539/1‑94 (MQ=255)
                          gATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTa                                                                 >  2:4081455/1‑94 (MQ=255)
                          gATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTa                                                                 <  1:1070932/94‑1 (MQ=255)
                           gttGCATAAGGATCGTTTCCCGCCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGAATTTCCTGCGGATCGAGATCGCCATAGCTAc                                                                <  1:6817197/93‑1 (MQ=255)
                           aTTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTAc                                                                <  2:9339151/94‑1 (MQ=255)
                              gCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTa                                                             >  2:3414790/1‑94 (MQ=255)
                              gCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTa                                                             >  2:6098832/1‑94 (MQ=255)
                              gCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTa                                                             <  1:4448383/94‑1 (MQ=255)
                               cATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTaa                                                            >  2:3620669/1‑94 (MQ=255)
                                aTAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTaaa                                                           <  1:4306291/94‑1 (MQ=255)
                                aTAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTaaa                                                           <  2:8382981/94‑1 (MQ=255)
                                 tAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAAt                                                          <  1:3002548/94‑1 (MQ=255)
                                  aaGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATg                                                         >  1:8199063/1‑94 (MQ=255)
                                    ggATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCt                                                       >  2:9770446/1‑94 (MQ=255)
                                    ggATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCt                                                       >  1:7834903/1‑94 (MQ=255)
                                     gATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTc                                                      <  1:92498/94‑1 (MQ=255)
                                       tCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCaa                                                    >  1:7945553/1‑94 (MQ=255)
                                        cGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAAc                                                   <  2:7814116/94‑1 (MQ=255)
                                        cGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAAc                                                   <  1:8946428/94‑1 (MQ=255)
                                         gTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACa                                                  <  2:1432778/94‑1 (MQ=255)
                                          ttACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACag                                                 >  2:6077824/1‑94 (MQ=255)
                                          ttACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACag                                                 >  1:2837143/1‑94 (MQ=255)
                                              cctccTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCAGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGAt                                             <  1:7007776/91‑1 (MQ=255)
                                              ccACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGAt                                             <  1:3244942/94‑1 (MQ=255)
                                              ccACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGAt                                             <  2:5864961/94‑1 (MQ=255)
                                              ccACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGAt                                             <  1:640330/94‑1 (MQ=255)
                                               cACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATg                                            <  2:3321281/94‑1 (MQ=255)
                                                 ccTGAGTCACATCTTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGcc                                          >  1:3846190/1‑94 (MQ=255)
                                                 ccTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGcc                                          >  2:6814752/1‑94 (MQ=255)
                                                 ccTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGcc                                          <  1:5963407/94‑1 (MQ=255)
                                                 ccTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGcc                                          <  1:2099685/94‑1 (MQ=255)
                                                  cTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGccc                                         <  2:9137024/94‑1 (MQ=255)
                                                   tGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCg                                        <  1:5831401/94‑1 (MQ=255)
                                                   tGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCg                                        >  2:4524235/1‑94 (MQ=255)
                                                   tGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCg                                        >  2:56283/1‑94 (MQ=255)
                                                     aGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCa                                      >  2:7689784/1‑94 (MQ=255)
                                                       tCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCaaa                                    <  1:7410804/94‑1 (MQ=255)
                                                         acaTATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAACAt                                  >  1:9068084/1‑94 (MQ=255)
                                                          caTATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATc                                 >  1:7737737/1‑94 (MQ=255)
                                                           atatTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATcc                                <  1:7555421/94‑1 (MQ=255)
                                                             atTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCgg                              >  2:6778581/1‑94 (MQ=255)
                                                               tCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGAt                            >  2:7243843/1‑94 (MQ=255)
                                                               tCAAAGCCGTTAAGCATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATCCCCGCAAAATCCGGAt                            <  2:21034/94‑1 (MQ=255)
                                                                cAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATg                           <  2:2967485/94‑1 (MQ=255)
                                                                cAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATg                           >  2:10212005/1‑94 (MQ=255)
                                                                 aaaGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATgg                          <  2:9867977/94‑1 (MQ=255)
                                                                   aGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGaa                        >  1:3135454/1‑94 (MQ=255)
                                                                    gCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAg                       <  1:2327950/94‑1 (MQ=255)
                                                                    gCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAg                       <  1:882890/94‑1 (MQ=255)
                                                                    gCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAg                       >  2:3872715/1‑94 (MQ=255)
                                                                     ccGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGGTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGt                      >  2:4262269/1‑94 (MQ=255)
                                                                     ccGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGt                      <  2:6878460/94‑1 (MQ=255)
                                                                      cGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTc                     <  2:2615084/94‑1 (MQ=255)
                                                                       gTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCg                    <  2:953150/94‑1 (MQ=255)
                                                                        ttAAGGCTCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAGAATCCGGATGGAAGTCGa                   <  1:9421833/94‑1 (MQ=255)
                                                                        ttAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGa                   <  2:2383338/94‑1 (MQ=255)
                                                                        ttAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGa                   <  1:5503243/94‑1 (MQ=255)
                                                                         tAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGaa                  <  2:3122607/94‑1 (MQ=255)
                                                                         tAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGaa                  <  1:2475770/94‑1 (MQ=255)
                                                                          aaGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAAc                 <  2:5745895/94‑1 (MQ=255)
                                                                           aGGATCAGCAGCGGCATTGCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACg                <  2:10310210/94‑1 (MQ=255)
                                                                           aGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACg                >  1:5707138/1‑94 (MQ=255)
                                                                           aGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACg                <  2:2039723/94‑1 (MQ=255)
                                                                            ggATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAAAGATGCCCGCAAAATCCGGATGGAAGTCGAACGc               >  2:1622490/1‑94 (MQ=255)
                                                                             gATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCa              <  1:1007444/94‑1 (MQ=255)
                                                                             gATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCa              >  1:8533942/1‑94 (MQ=255)
                                                                              aTCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAg             <  2:7514416/94‑1 (MQ=255)
                                                                                cagcagCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAgcg           <  2:847782/94‑1 (MQ=255)
                                                                                 agcagcGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAgcgc          >  2:6320930/1‑94 (MQ=255)
                                                                                    agcGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCTGGATGGAAGTCGAACGCAGCGCCGt       >  1:9600311/1‑94 (MQ=255)
                                                                                    agcGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGt       >  2:2713635/1‑94 (MQ=255)
                                                                                      cGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGttt     <  1:1392410/94‑1 (MQ=255)
                                                                                      cGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGttt     >  2:9667784/1‑94 (MQ=255)
                                                                                       ggCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTc    >  2:9824409/1‑94 (MQ=255)
                                                                                        gCATTTCCTGCGGATCGAGATCTCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTcc   >  1:6760163/1‑94 (MQ=255)
                                                                                         cATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGACCGCAGCGCTGTTTCCt  <  1:1625511/94‑1 (MQ=255)
                                                                                         cATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCt  >  2:5413772/1‑94 (MQ=255)
                                                                                         cATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCt  >  1:358219/1‑94 (MQ=255)
                                                                                                |                                                                                        
GGTTTGCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCT  >  NC_000913/3115022‑3115203

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TTCCGCGTACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGCTGTCGATTTCA  >  NC_000913/3123492‑3123678
                                                                                                |                                                                                              
TTCCGCGTACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGG                                                                                                <  SRR4302545.6714668/94‑1 (MQ=60)
TTCCGCGTACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGG                                                                                                <  SRR4302545.1962626/94‑1 (MQ=60)
TTCCGCGTACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGG                                                                                                <  SRR4302545.3413103/94‑1 (MQ=60)
TTCCGCGTACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGG                                                                                                <  SRR4302545.1139888/94‑1 (MQ=60)
TTCCGCGTACATGCGACCGGGGTTAAACACGCCGCAAGGATCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGG                                                                                                >  SRR4302545.5077520/1‑94 (MQ=60)
  CCGCGTACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGgc                                                                                              >  SRR4302545.731257/1‑92 (MQ=60)
   CGCGTACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGgca                                                                                             <  SRR4302545.10242417/94‑4 (MQ=60)
   CGCGTACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGgca                                                                                             <  SRR4302545.10941884/94‑4 (MQ=60)
   CGCGTACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGgca                                                                                             <  SRR4302545.10941883/94‑4 (MQ=60)
    GCGTACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAA                                                                                            >  SRR4302545.757357/1‑94 (MQ=60)
      GTACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAG                                                                                          >  SRR4302545.8946610/1‑94 (MQ=60)
      GTACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAG                                                                                          <  SRR4302545.1327360/94‑1 (MQ=60)
      GTACATGCGACCGGGGTGAAACACGCCGCAAGGGTCGATCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAG                                                                                          <  SRR4302545.8890514/94‑1 (MQ=60)
      GTACATGCGACCGGGGTAAAACGCGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAG                                                                                          <  SRR4302545.4688003/94‑1 (MQ=60)
       TACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGC                                                                                         <  SRR4302545.6423676/94‑1 (MQ=60)
        ACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGTTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCC                                                                                        <  SRR4302545.5071044/94‑1 (MQ=60)
        ACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCC                                                                                        <  SRR4302545.7389228/94‑1 (MQ=60)
        ACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCC                                                                                        <  SRR4302545.7389227/94‑1 (MQ=60)
        ACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCC                                                                                        >  SRR4302545.4222662/1‑94 (MQ=60)
        ACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCC                                                                                        <  SRR4302545.9552079/94‑1 (MQ=60)
         CATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCA                                                                                       >  SRR4302545.6680783/1‑94 (MQ=60)
         CATGCGACCGGGGATAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCCGGGGAAAGCCA                                                                                       >  SRR4302545.4456046/1‑94 (MQ=60)
          ATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCAC                                                                                      >  SRR4302545.6181291/1‑94 (MQ=60)
          ATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCAC                                                                                      >  SRR4302545.1123597/1‑94 (MQ=60)
          ATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCAC                                                                                      <  SRR4302545.858274/94‑1 (MQ=60)
           TGCGACCGGGGTTAAACACGCCGTAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACC                                                                                     <  SRR4302545.5985150/94‑1 (MQ=60)
            GCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCA                                                                                    >  SRR4302545.4757517/1‑94 (MQ=60)
             CGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCAT                                                                                   >  SRR4302545.3617926/1‑94 (MQ=60)
             CGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCAT                                                                                   >  SRR4302545.3617925/1‑94 (MQ=60)
             CGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCAT                                                                                   >  SRR4302545.10295436/1‑94 (MQ=60)
              GACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATC                                                                                  >  SRR4302545.10015746/1‑94 (MQ=60)
              GACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATC                                                                                  >  SRR4302545.2675046/1‑94 (MQ=60)
              GACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATC                                                                                  >  SRR4302545.5771233/1‑94 (MQ=60)
              GACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATC                                                                                  >  SRR4302545.7455974/1‑94 (MQ=60)
              GACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATC                                                                                  >  SRR4302545.7428860/1‑94 (MQ=60)
               ACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCT                                                                                 >  SRR4302545.2233018/1‑94 (MQ=60)
                CCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTC                                                                                <  SRR4302545.10516783/94‑1 (MQ=60)
                 CGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCC                                                                               <  SRR4302545.4517994/94‑1 (MQ=60)
                 CGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCC                                                                               <  SRR4302545.8393178/94‑1 (MQ=60)
                 CGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCC                                                                               <  SRR4302545.1377843/94‑1 (MQ=60)
                  GGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCG                                                                              >  SRR4302545.1197834/1‑94 (MQ=60)
                  GGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCG                                                                              >  SRR4302545.8120021/1‑94 (MQ=60)
                    GGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGC                                                                            >  SRR4302545.2231226/1‑94 (MQ=60)
                    GGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGCGGCAAAGCCACCATCTCCGGC                                                                            >  SRR4302545.3710624/1‑94 (MQ=60)
                     GTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGTCA                                                                           >  SRR4302545.6660790/1‑94 (MQ=60)
                     GTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCA                                                                           <  SRR4302545.8395589/94‑1 (MQ=60)
                      TTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCAC                                                                          >  SRR4302545.6488694/1‑94 (MQ=60)
                       tatatacgttgtAAGGGTTGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGATTAAAGGAGCCGATAGCGGGGCATATCCACCATCTCCGGCACT                                                                         >  SRR4302545.9695080/13‑94 (MQ=60)
                        AAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTA                                                                        >  SRR4302545.10045666/1‑94 (MQ=60)
                        AAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTA                                                                        <  SRR4302545.10795014/94‑1 (MQ=60)
                         AACACGCCGCAAGGNTNGAGCTGCTGTTTANGCTNCTGGTNATAGCGGAATAAAGGANCNGATAGCNNGNCAAAGCCACCATCTCCGGCNCTAA                                                                       <  SRR4302545.9447457/94‑1 (MQ=60)
                         AACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAA                                                                       >  SRR4302545.3752174/1‑94 (MQ=60)
                          ACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAA                                                                      >  SRR4302545.9556509/1‑94 (MQ=60)
                          ACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAA                                                                      >  SRR4302545.811470/1‑94 (MQ=60)
                           CCCGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAG                                                                     <  SRR4302545.5083345/94‑1 (MQ=60)
                           CACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAG                                                                     >  SRR4302545.149377/1‑94 (MQ=60)
                           CACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAG                                                                     <  SRR4302545.4286406/94‑1 (MQ=60)
                             CGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCG                                                                   >  SRR4302545.7114342/1‑94 (MQ=60)
                               CCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGG                                                                 <  SRR4302545.4852672/94‑1 (MQ=60)
                               CCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGG                                                                 >  SRR4302545.75812/1‑94 (MQ=60)
                               CCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGG                                                                 <  SRR4302545.9564616/94‑1 (MQ=60)
                               CCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGG                                                                 <  SRR4302545.10792428/94‑1 (MQ=60)
                                CGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGT                                                                >  SRR4302545.10221484/1‑94 (MQ=60)
                                 ctaggggccgacCTGCTTTTTAACCTGCTGGTGATAGCGAAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTC                                                               <  SRR4302545.330077/82‑1 (MQ=60)
                                 GCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTC                                                               <  SRR4302545.330078/94‑1 (MQ=60)
                                  CAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCG                                                              <  SRR4302545.4507441/94‑1 (MQ=60)
                                  CAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCG                                                              <  SRR4302545.3528719/94‑1 (MQ=60)
                                   AAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGC                                                             >  SRR4302545.3239413/1‑94 (MQ=60)
                                   AAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGC                                                             >  SRR4302545.9973728/1‑94 (MQ=60)
                                     GGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCAT                                                           <  SRR4302545.3535116/94‑1 (MQ=60)
                                     GGGTCGAGCTGCTGTTTAAGCTGCTGGTGATACGGGAAGAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCAT                                                           <  SRR4302545.5468084/94‑1 (MQ=60)
                                       GTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGA                                                         >  SRR4302545.2140484/1‑94 (MQ=60)
                                       GTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGA                                                         >  SRR4302545.4560814/1‑94 (MQ=60)
                                        TCGAGCTGCTTTTTAAGCTGTGGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCGGCACTAAAGCGGGTCGCATGACC                                                       <  SRR4302545.1879383/94‑1 (MQ=60)
                                        TCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGAC                                                        >  SRR4302545.7453839/1‑94 (MQ=60)
                                        TCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGAC                                                        <  SRR4302545.3442289/94‑1 (MQ=60)
                                        GCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGAAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGAC                                                        <  SRR4302545.1235429/94‑1 (MQ=60)
                                         CGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACC                                                       >  SRR4302545.1051514/1‑94 (MQ=60)
                                         CGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACC                                                       >  SRR4302545.4098056/1‑94 (MQ=60)
                                         CGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACC                                                       <  SRR4302545.342297/94‑1 (MQ=60)
                                          GAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCG                                                      >  SRR4302545.8674427/1‑94 (MQ=60)
                                            GCTGCTGTTTAAGTTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCC                                                    <  SRR4302545.10261933/94‑1 (MQ=60)
                                             CTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCA                                                   <  SRR4302545.177233/94‑1 (MQ=60)
                                             CTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCA                                                   <  SRR4302545.3717690/94‑1 (MQ=60)
                                              TGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGTCAG                                                  >  SRR4302545.6077946/1‑94 (MQ=60)
                                              TGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAG                                                  >  SRR4302545.5272173/1‑94 (MQ=60)
                                              TGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAG                                                  <  SRR4302545.1873698/94‑1 (MQ=60)
                                               GCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGC                                                 <  SRR4302545.7109427/94‑1 (MQ=60)
                                                CTGTTTAAGTTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCG                                                <  SRR4302545.8751066/94‑1 (MQ=60)
                                                CTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCG                                                >  SRR4302545.4957777/1‑94 (MQ=60)
                                                CTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCG                                                >  SRR4302545.10856063/1‑94 (MQ=60)
                                                CTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCCCATGACCGCCAGCG                                                <  SRR4302545.7730673/94‑1 (MQ=60)
                                                 TGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAGGCGGGTTGCATGACCGCCAGCGT                                               >  SRR4302545.5281884/1‑94 (MQ=60)
                                                  GTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTT                                              <  SRR4302545.3690684/94‑1 (MQ=60)
                                                  GTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTT                                              <  SRR4302545.4665755/94‑1 (MQ=60)
                                                  GTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACAGCCAGCGTT                                              >  SRR4302545.7024483/1‑94 (MQ=60)
                                                   TTTAAGCTGCTGGTGATAGCGGATTAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTG                                             <  SRR4302545.7450581/94‑1 (MQ=60)
                                                    TTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGC                                            <  SRR4302545.830875/94‑1 (MQ=60)
                                                    TTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGC                                            >  SRR4302545.5275231/1‑94 (MQ=60)
                                                     TAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCG                                           <  SRR4302545.3388053/94‑1 (MQ=60)
                                                       AGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGG                                         >  SRR4302545.9606760/1‑94 (MQ=60)
                                                       AGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGG                                         <  SRR4302545.6328505/94‑1 (MQ=60)
                                                        gcggcttggGATAGCGTAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGC                                        <  SRR4302545.6795288/85‑1 (MQ=60)
                                                        GCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGC                                        <  SRR4302545.8569156/94‑1 (MQ=60)
                                                        GCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGC                                        >  SRR4302545.5027228/1‑94 (MQ=60)
                                                        ACTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAACCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGC                                        <  SRR4302545.8357947/94‑1 (MQ=60)
                                                         CTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCG                                       >  SRR4302545.10841693/1‑94 (MQ=60)
                                                           tgtgggagaagaGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGAT                                     <  SRR4302545.5889443/82‑1 (MQ=60)
                                                           gtgcgtgaaAGCGGAATAAATGATCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCTGGTCGCATGACCGCCAGCGTTGCGGGCGAT                                     <  SRR4302545.7427266/85‑1 (MQ=60)
                                                           GCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGAT                                     >  SRR4302545.10135841/1‑94 (MQ=60)
                                                            GTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATG                                    <  SRR4302545.541682/94‑1 (MQ=60)
                                                            CTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATG                                    >  SRR4302545.10112701/1‑94 (MQ=60)
                                                            CTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATG                                    >  SRR4302545.4950639/1‑94 (MQ=60)
                                                            CTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATG                                    <  SRR4302545.5690083/94‑1 (MQ=60)
                                                             TGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGC                                   >  SRR4302545.1811818/1‑94 (MQ=60)
                                                             TGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGC                                   >  SRR4302545.1811819/1‑94 (MQ=60)
                                                             TGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGC                                   <  SRR4302545.7074097/94‑1 (MQ=60)
                                                             TGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGC                                   <  SRR4302545.1816612/94‑1 (MQ=60)
                                                              GGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCG                                  <  SRR4302545.841231/94‑1 (MQ=60)
                                                              GGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCG                                  <  SRR4302545.3337126/94‑1 (MQ=60)
                                                              GGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGAG                                  >  SRR4302545.10813812/1‑94 (MQ=60)
                                                               GTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGA                                 >  SRR4302545.4028718/1‑94 (MQ=60)
                                                                TGATAGCGGAATAAAGGAGCGGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGAT                                <  SRR4302545.1598924/94‑1 (MQ=60)
                                                                TGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGAT                                >  SRR4302545.3339595/1‑94 (MQ=60)
                                                                TGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGAT                                <  SRR4302545.9552076/94‑1 (MQ=60)
                                                                TGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGAT                                >  SRR4302545.7037334/1‑94 (MQ=60)
                                                                TGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGAT                                >  SRR4302545.8829264/1‑94 (MQ=60)
                                                                 GATGGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTGGCATGACCGCCAGCGTTGCGGGtggtacaatg                               >  SRR4302545.5466780/1‑84 (MQ=60)
                                                                 GATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATG                               >  SRR4302545.9295100/1‑94 (MQ=60)
                                                                 GATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATG                               >  SRR4302545.10772807/1‑94 (MQ=60)
                                                                 GATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATAACCGCCAGCGTTGCGGGCGATGCGATG                               >  SRR4302545.5466781/1‑94 (MQ=60)
                                                                  ATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGG                              <  SRR4302545.1779674/94‑1 (MQ=60)
                                                                  ATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGG                              <  SRR4302545.4424345/94‑1 (MQ=60)
                                                                  ATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGG                              <  SRR4302545.5275441/94‑1 (MQ=60)
                                                                   TAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGA                             <  SRR4302545.9264161/94‑1 (MQ=60)
                                                                   TAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGA                             >  SRR4302545.10721468/1‑94 (MQ=60)
                                                                   TAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGA                             >  SRR4302545.4423643/1‑94 (MQ=60)
                                                                   TAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGAGCGATGCGtgggt                             >  SRR4302545.6595156/1‑89 (MQ=60)
                                                                   TAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCAACATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGA                             >  SRR4302545.10721467/1‑94 (MQ=60)
                                                                    AGCGAAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGAT                            <  SRR4302545.810925/94‑1 (MQ=60)
                                                                     GCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATT                           <  SRR4302545.6833885/94‑1 (MQ=60)
                                                                     GCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATT                           <  SRR4302545.3976916/94‑1 (MQ=60)
                                                                      CGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTT                          <  SRR4302545.4063874/94‑1 (MQ=60)
                                                                       GGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTG                         >  SRR4302545.7944365/1‑94 (MQ=60)
                                                                       GGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTG                         >  SRR4302545.8549183/1‑94 (MQ=60)
                                                                       GGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTG                         >  SRR4302545.7903740/1‑94 (MQ=60)
                                                                       GGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTA                         >  SRR4302545.8549186/1‑94 (MQ=60)
                                                                         ggaaaaagggaccccaaagcgcGGCAAAGCCACAATCTCCGGCACTAAAGCGGGCCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTG                         <  SRR4302545.9202792/72‑1 (MQ=60)
                                                                         AATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGAT                       >  SRR4302545.8547459/1‑94 (MQ=60)
                                                                         AATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGAT                       <  SRR4302545.5164337/94‑1 (MQ=60)
                                                                          ATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATT                      >  SRR4302545.10489291/1‑94 (MQ=60)
                                                                          ATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATT                      <  SRR4302545.3352277/94‑1 (MQ=60)
                                                                          ATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATT                      >  SRR4302545.584757/1‑94 (MQ=60)
                                                                          ATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATT                      >  SRR4302545.9318414/1‑94 (MQ=60)
                                                                           TAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTG                     >  SRR4302545.6177806/1‑94 (MQ=60)
                                                                           TAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTG                     <  SRR4302545.7623634/94‑1 (MQ=60)
                                                                           TAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTG                     <  SRR4302545.2716573/94‑1 (MQ=60)
                                                                            AAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGT                    >  SRR4302545.431524/1‑94 (MQ=60)
                                                                             AAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTC                   <  SRR4302545.2771549/94‑1 (MQ=60)
                                                                             AAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTC                   >  SRR4302545.3275684/1‑94 (MQ=60)
                                                                             AAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTC                   >  SRR4302545.1684051/1‑94 (MQ=60)
                                                                              AGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCC                  <  SRR4302545.4606469/94‑1 (MQ=60)
                                                                              AGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCC                  >  SRR4302545.3308294/1‑94 (MQ=60)
                                                                              AGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCC                  >  SRR4302545.9422288/1‑94 (MQ=60)
                                                                              AGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCC                  >  SRR4302545.639918/1‑94 (MQ=60)
                                                                              AGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCC                  <  SRR4302545.6120304/94‑1 (MQ=60)
                                                                              AGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCC                  <  SRR4302545.5891224/94‑1 (MQ=60)
                                                                               GGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCT                 <  SRR4302545.1042632/94‑1 (MQ=60)
                                                                               GGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCT                 >  SRR4302545.10778813/1‑94 (MQ=60)
                                                                               GGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCT                 >  SRR4302545.5000502/1‑94 (MQ=60)
                                                                               GGAGCAGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCT                 <  SRR4302545.242061/94‑1 (MQ=60)
                                                                                CAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGAGATGGATTTGATTGTCCTC                >  SRR4302545.2810878/1‑94 (MQ=60)
                                                                                 AGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCG               <  SRR4302545.998827/94‑1 (MQ=60)
                                                                                  GCCGATAGCGGGACAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGG              <  SRR4302545.10725460/94‑1 (MQ=60)
                                                                                    CGATAGCGGGGTAAAGCCACCATATCCGGCACTAAAGAGGGTCCCATGACCGCCAGCGTTGCGGGCGATGCGAAGGATTTGATTGTCCTCGGCT            >  SRR4302545.10354928/1‑94 (MQ=60)
                                                                                    CGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGCT            >  SRR4302545.4755236/1‑94 (MQ=60)
                                                                                     GATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGCTG           >  SRR4302545.396408/1‑94 (MQ=60)
                                                                                     GATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGCTG           <  SRR4302545.8993988/94‑1 (MQ=60)
                                                                                     GATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGCTG           >  SRR4302545.6688339/1‑94 (MQ=60)
                                                                                     GATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGCTG           >  SRR4302545.1883482/1‑94 (MQ=60)
                                                                                      ATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGCTGT          >  SRR4302545.10466695/1‑94 (MQ=60)
                                                                                       TAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGCTGTC         <  SRR4302545.102938/94‑1 (MQ=60)
                                                                                       TAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGCTGTC         >  SRR4302545.6968612/1‑94 (MQ=60)
                                                                                       TAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGCTGTC         >  SRR4302545.3845527/1‑94 (MQ=60)
                                                                                        AGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGCTGTCG        >  SRR4302545.8610543/1‑94 (MQ=60)
                                                                                        AGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGCTGTCA        <  SRR4302545.10191390/94‑1 (MQ=60)
                                                                                           cgGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGCTGTCGAT      >  SRR4302545.3788036/3‑94 (MQ=60)
                                                                                           cgGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGCTGTCGAT      <  SRR4302545.6381653/92‑1 (MQ=60)
                                                                                             GGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGCTGTCGATTT    >  SRR4302545.4280011/1‑94 (MQ=60)
                                                                                               GGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGCTGTCGATTTC   >  SRR4302545.8366962/1‑94 (MQ=60)
                                                                                                GCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGCTGTCGATTTCA  >  SRR4302545.5375895/1‑94 (MQ=60)
                                                                                                GCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGCTGTCGATTTCA  <  SRR4302545.4311565/94‑1 (MQ=60)
                                                                                                |                                                                                              
TTCCGCGTACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGCTGTCGATTTCA  >  NC_000913/3123492‑3123678

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: