Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,179,042 T→C A202A (GCT→GCC)  ygiC → putative synthetase/amidase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,179,0420TC99.3% 1966.6 / ‑0.3 567A202A (GCT→GCC) ygiCputative synthetase/amidase
Reads supporting (aligned to +/- strand):  ref base T (2/2);  new base C (267/295);  total (270/297)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.19e-01

Only 100 of 585 total aligned reads displayed.

AGTTGCTGCATCTCACCTGCTGTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCTACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAATTTCCAACCTGTTCAAA  >  NC_000913/3178951‑3179132
                                                                                           |                                                                                          
aGTTGCTGCATCTCACCTGCTGTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGCAATTGCCAc                                                                                          >  1:452072/1‑94 (MQ=255)
 gTTGCTGCATCTCACCTGCTGTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACt                                                                                         <  2:8453167/94‑1 (MQ=255)
 gTTGCTGCATCTCACCTGCTGTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACt                                                                                         >  2:8587622/1‑94 (MQ=255)
 gTTGCTGCATCTCACCTGCTGTCGCGACACGGTGGAAGATAGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACt                                                                                         >  1:6428811/1‑94 (MQ=255)
     ctgcATCTCACCTGCTGTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGt                                                                                     <  2:5979285/94‑1 (MQ=255)
      tgcATCTCACCTGCTGTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGtt                                                                                    >  2:321846/1‑94 (MQ=255)
      tgcATCTCACCTGCTGTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGtt                                                                                    <  1:3049200/94‑1 (MQ=255)
         aTCTCACCTGCTGTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCct                                                                                 >  2:8493380/1‑94 (MQ=255)
         aTCTCACCTGCTGTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCct                                                                                 <  1:5681643/94‑1 (MQ=255)
          tctcACCTGCTGTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCctc                                                                                <  2:8268252/94‑1 (MQ=255)
           ctcACCTGCTGTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCctct                                                                               <  2:5076393/94‑1 (MQ=255)
             cACCTGCTGTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCACCGGAAGCTGAAATTGCCACTGAGTTCctctcc                                                                             >  1:1551539/1‑92 (MQ=255)
             cACCTGCTGTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTAc                                                                             >  1:5710415/1‑94 (MQ=255)
             cACCTGCTGTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTAc                                                                             <  2:7520357/94‑1 (MQ=255)
              aCCTGCTGTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACa                                                                            <  2:387176/94‑1 (MQ=255)
              aCCTGCTGTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACa                                                                            <  1:1079750/94‑1 (MQ=255)
               ccTGCTGTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACAt                                                                           >  1:4751503/1‑94 (MQ=255)
                ctgctgTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAACTTGCCACTGAGTTCCTCTACATc                                                                          >  2:5423453/1‑94 (MQ=255)
                 tgctgTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCg                                                                         >  1:196801/1‑94 (MQ=255)
                 tgctgTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCg                                                                         >  2:6332766/1‑94 (MQ=255)
                   ctgTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCgat                                                                       <  2:9530697/94‑1 (MQ=255)
                   ctgTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCgat                                                                       <  2:10519338/94‑1 (MQ=255)
                    tgTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCgatg                                                                      <  1:2541963/94‑1 (MQ=255)
                      tCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCgatgat                                                                    <  2:4731842/94‑1 (MQ=255)
                      tCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCgatgat                                                                    <  2:5878525/94‑1 (MQ=255)
                          gACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCTACTGAGTTCCTCTACATCGATGATATCg                                                                <  2:7407593/94‑1 (MQ=255)
                          gACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCg                                                                <  2:9643282/94‑1 (MQ=255)
                               ggTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTa                                                           <  1:3642900/94‑1 (MQ=255)
                               ggTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTa                                                           >  1:8756399/1‑94 (MQ=255)
                               ggTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTa                                                           >  2:6942497/1‑94 (MQ=255)
                                gTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAg                                                          <  1:10245812/94‑1 (MQ=255)
                                 tGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAgg                                                         <  1:1473853/94‑1 (MQ=255)
                                 tGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAgg                                                         >  2:7747557/1‑94 (MQ=255)
                                 tGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAgg                                                         <  1:9809439/94‑1 (MQ=255)
                                   gAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTg                                                       <  2:5140511/94‑1 (MQ=255)
                                     aGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGaa                                                     <  2:10325698/94‑1 (MQ=255)
                                      gATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGaaa                                                    <  1:329606/94‑1 (MQ=255)
                                       gtCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGaaaa                                                   <  2:6715945/93‑1 (MQ=255)
                                       aTCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGaaaa                                                   >  2:180015/1‑94 (MQ=255)
                                        tCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGaaaaa                                                  >  1:5290358/1‑94 (MQ=255)
                                         cgcgGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAg                                                 >  1:7623571/1‑94 (MQ=255)
                                           cgGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGt                                               >  1:8514297/1‑94 (MQ=255)
                                           cgGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGt                                               <  1:6671029/94‑1 (MQ=255)
                                           cgGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGt                                               <  2:3493727/94‑1 (MQ=255)
                                            ggAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTc                                              >  2:2237773/1‑94 (MQ=255)
                                            ggAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTc                                              >  1:883655/1‑94 (MQ=255)
                                             gAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCa                                             >  2:5650849/1‑94 (MQ=255)
                                              aaCCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAg                                            <  2:4590539/94‑1 (MQ=255)
                                              aaCCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAg                                            <  2:6626055/94‑1 (MQ=255)
                                               aCCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGt                                           >  2:1601921/1‑94 (MQ=255)
                                               aCCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGt                                           >  1:8573323/1‑94 (MQ=255)
                                                ccATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGtt                                          <  1:8298713/94‑1 (MQ=255)
                                                 cATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTc                                         >  2:8794950/1‑94 (MQ=255)
                                                 cATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTc                                         >  2:3947411/1‑94 (MQ=255)
                                                   ttCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGCGAAAAAGGTCAGTTCAc                                       >  1:7255130/1‑94 (MQ=255)
                                                    tCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACg                                      <  2:5316866/94‑1 (MQ=255)
                                                    tCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACg                                      <  1:3574733/94‑1 (MQ=255)
                                                    tCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACg                                      <  1:5532788/94‑1 (MQ=255)
                                                     cAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACgg                                     <  2:4418257/94‑1 (MQ=255)
                                                     cAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACgg                                     >  1:6972892/1‑94 (MQ=255)
                                                        tATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGAtt                                  >  2:7187639/1‑94 (MQ=255)
                                                         aTTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGAttt                                 <  1:1007938/94‑1 (MQ=255)
                                                         aTTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGAttt                                 >  1:433910/1‑94 (MQ=255)
                                                         aTTTGCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGAttt                                 >  1:9923075/1‑94 (MQ=255)
                                                             gCAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAg                             <  2:2485200/94‑1 (MQ=255)
                                                              cAGGACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAgg                            >  1:8164921/1‑94 (MQ=255)
                                                                 gACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATc                         >  1:3786425/1‑94 (MQ=255)
                                                                 gACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATc                         <  2:2035228/94‑1 (MQ=255)
                                                                 gACTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATc                         >  2:9309929/1‑94 (MQ=255)
                                                                   cTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAg                       >  1:10512198/1‑94 (MQ=255)
                                                                   cTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAg                       >  2:61922/1‑94 (MQ=255)
                                                                   cTGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAg                       >  1:2730963/1‑94 (MQ=255)
                                                                    tGCGCAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAgg                      >  2:3646693/1‑94 (MQ=255)
                                                                    cgcgcAACGGAAGCTGAAATTGCCACGGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAgg                      <  1:6050948/93‑1 (MQ=255)
                                                                      cgcAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTa                    <  1:5165173/94‑1 (MQ=255)
                                                                       gcAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTaa                   <  1:6230950/94‑1 (MQ=255)
                                                                       gcAACGCAAGCTGAAATTGCCACTGAGTCCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTaa                   <  1:413686/94‑1 (MQ=255)
                                                                        cAACGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAAt                  >  2:904446/1‑94 (MQ=255)
                                                                          aCGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAAttt                <  2:1092664/94‑1 (MQ=255)
                                                                          aCGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAAttt                <  1:1260824/94‑1 (MQ=255)
                                                                          aCGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAAttt                >  2:6525135/1‑94 (MQ=255)
                                                                           cGGAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAATTTc               <  2:3110271/94‑1 (MQ=255)
                                                                            ggAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGGAAAAGGGCAGTTCACGGATTTACAGGATCAGGTAATTTcc              >  2:1265970/1‑94 (MQ=255)
                                                                            ggAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAATTTcc              <  1:7031796/94‑1 (MQ=255)
                                                                            ggAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAATTTcc              <  1:959544/94‑1 (MQ=255)
                                                                             gAAGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAATTTCCa             >  2:1382878/1‑94 (MQ=255)
                                                                              aaGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAATTTCCaa            >  1:2880997/1‑94 (MQ=255)
                                                                               aGCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAATTTCCAAc           <  2:10132150/94‑1 (MQ=255)
                                                                                gCTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAATTTCCAAcc          >  2:415059/1‑94 (MQ=255)
                                                                                 cTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAATTTCCAACCt         >  1:2135981/1‑94 (MQ=255)
                                                                                 cTGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAATTTCCAACCt         >  2:2602791/1‑94 (MQ=255)
                                                                                  tGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAATTTCCAACCTg        <  1:4933206/94‑1 (MQ=255)
                                                                                  tGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAATTTCCAACCTg        >  1:2465886/1‑94 (MQ=255)
                                                                                  tGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAATTTCCAACCTg        <  1:9512729/94‑1 (MQ=255)
                                                                                  tGAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAATTTCCAACCTg        >  2:4959582/1‑94 (MQ=255)
                                                                                   gAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAATTTCCAACCTGt       <  1:9080640/94‑1 (MQ=255)
                                                                                   gAAATTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAATTTCCAACCTGt       <  1:9199170/94‑1 (MQ=255)
                                                                                     aaTTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAATTTCCAACCTGTTc     <  2:8184515/94‑1 (MQ=255)
                                                                                      aTTGCCACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAATTTCCAACCTGTTCa    <  1:10000358/94‑1 (MQ=255)
                                                                                        tGCCACTGAGTCCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAATTTCCAACCTGTTCaaa  <  1:7979122/94‑1 (MQ=255)
                                                                                           |                                                                                          
AGTTGCTGCATCTCACCTGCTGTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCTACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAATTTCCAACCTGTTCAAA  >  NC_000913/3178951‑3179132

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 321 total aligned reads displayed.
TTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATTTCGATAAAGGGAAAATGCAATTATCCATATTTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATC  >  NC_000913/3185683‑3185869
                                                                                             |                                                                                             
TTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAATCCTGATCGATGGTTGTTACCCTATCGAAAAAGAAACACAAATTAAAACTTATC                                                                                               <  SRR4302545.7288503/94‑1 (MQ=60)
TTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATC                                                                                               >  SRR4302545.2627424/1‑94 (MQ=60)
 TAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCT                                                                                              <  SRR4302545.2668331/94‑1 (MQ=60)
 TAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCT                                                                                              >  SRR4302545.4926458/1‑94 (MQ=60)
 TAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCT                                                                                              >  SRR4302545.9605030/1‑94 (MQ=60)
  AGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTC                                                                                             <  SRR4302545.6697959/94‑1 (MQ=60)
  AGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTC                                                                                             <  SRR4302545.2729293/94‑1 (MQ=60)
   GGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCG                                                                                            <  SRR4302545.8705403/94‑1 (MQ=60)
    GATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGA                                                                                           <  SRR4302545.5713085/94‑1 (MQ=60)
     ATTTGCTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGAT                                                                                          <  SRR4302545.8803734/94‑1 (MQ=60)
     ATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGAT                                                                                          <  SRR4302545.10045115/94‑1 (MQ=60)
     ATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGAT                                                                                          <  SRR4302545.6011209/94‑1 (MQ=60)
     ATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGAT                                                                                          <  SRR4302545.6695746/94‑1 (MQ=60)
     ATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTAACCTATCGAAAAAGAAAAACAAATTACAACTTATCTTGAT                                                                                          >  SRR4302545.5823063/1‑94 (MQ=60)
      TTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATA                                                                                         <  SRR4302545.6915783/94‑1 (MQ=60)
      TTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATA                                                                                         <  SRR4302545.9890258/94‑1 (MQ=60)
       TTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAA                                                                                        <  SRR4302545.10614991/94‑1 (MQ=60)
       TTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAA                                                                                        >  SRR4302545.2963905/1‑94 (MQ=60)
       TTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAA                                                                                        >  SRR4302545.10556714/1‑94 (MQ=60)
        TACTGATAAATTTATTGAAAAATCTCAGCAAAACCTGATCGATGGTTGTAACCATATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAA                                                                                       <  SRR4302545.9921203/94‑1 (MQ=60)
         ACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAG                                                                                      <  SRR4302545.9118059/94‑1 (MQ=60)
         ACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAG                                                                                      <  SRR4302545.9769644/94‑1 (MQ=60)
          CTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGG                                                                                     <  SRR4302545.6629297/94‑1 (MQ=60)
          CTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGG                                                                                     <  SRR4302545.1625178/94‑1 (MQ=60)
          ATGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGG                                                                                     <  SRR4302545.8588285/94‑1 (MQ=60)
           TGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGG                                                                                    >  SRR4302545.7685309/1‑94 (MQ=60)
           TGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGG                                                                                    <  SRR4302545.6251310/94‑1 (MQ=60)
           TGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGG                                                                                    <  SRR4302545.8738204/94‑1 (MQ=60)
           TGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGG                                                                                    <  SRR4302545.5917156/94‑1 (MQ=60)
           TGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGG                                                                                    <  SRR4302545.3715024/94‑1 (MQ=60)
            GATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGA                                                                                   >  SRR4302545.9545097/1‑94 (MQ=60)
            GATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGA                                                                                   <  SRR4302545.9325593/94‑1 (MQ=60)
             ATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAA                                                                                  >  SRR4302545.2665268/1‑94 (MQ=60)
               GAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAA                                                                                <  SRR4302545.7693120/94‑1 (MQ=60)
                AATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGCTAAAGGTAAAAT                                                                               >  SRR4302545.7579832/1‑94 (MQ=60)
                AATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAAT                                                                               <  SRR4302545.8823826/94‑1 (MQ=60)
                AATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAAT                                                                               <  SRR4302545.5381083/94‑1 (MQ=60)
                 ATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATG                                                                              <  SRR4302545.9588424/94‑1 (MQ=60)
                 ATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCCAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATG                                                                              >  SRR4302545.831592/1‑94 (MQ=60)
                  TTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGC                                                                             >  SRR4302545.6103700/1‑94 (MQ=60)
                  TTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGC                                                                             <  SRR4302545.2891025/94‑1 (MQ=60)
                   TTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATACAGGGAAAATGCA                                                                            >  SRR4302545.7894138/1‑94 (MQ=60)
                   TTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCA                                                                            >  SRR4302545.10899326/1‑94 (MQ=60)
                   TTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCA                                                                            >  SRR4302545.5972924/1‑94 (MQ=60)
                   TTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCA                                                                            >  SRR4302545.4542706/1‑94 (MQ=60)
                   TTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCA                                                                            >  SRR4302545.3393148/1‑94 (MQ=60)
                    TATTGAAAAAACTCAGCAAAACCTNATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAA                                                                           <  SRR4302545.230539/94‑1 (MQ=60)
                    TATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGGAAAAGGAAAACAAATTACAACTTATCTCGATAcaggggaactgcat                                                                           >  SRR4302545.6878666/1‑80 (MQ=60)
                    TATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAA                                                                           <  SRR4302545.3545065/94‑1 (MQ=60)
                    TATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAA                                                                           >  SRR4302545.1411137/1‑94 (MQ=60)
                     ATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAAT                                                                          >  SRR4302545.8230567/1‑94 (MQ=60)
                     ATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAAT                                                                          >  SRR4302545.9857789/1‑94 (MQ=60)
                     ATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAAT                                                                          <  SRR4302545.1861948/94‑1 (MQ=60)
                     ATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAAT                                                                          <  SRR4302545.9154090/94‑1 (MQ=60)
                      TTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATT                                                                         <  SRR4302545.5086338/94‑1 (MQ=60)
                       TGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTA                                                                        <  SRR4302545.9412644/94‑1 (MQ=60)
                       TGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTA                                                                        <  SRR4302545.8549739/94‑1 (MQ=60)
                       TGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTA                                                                        >  SRR4302545.1111130/1‑94 (MQ=60)
                        TAAAAATCTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTAT                                                                       <  SRR4302545.1967610/94‑1 (MQ=60)
                         AAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATC                                                                      >  SRR4302545.1697787/1‑94 (MQ=60)
                           AAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCA                                                                    >  SRR4302545.7837427/1‑94 (MQ=60)
                            AAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCAT                                                                   <  SRR4302545.7653586/94‑1 (MQ=60)
                            AAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCAT                                                                   <  SRR4302545.2540370/94‑1 (MQ=60)
                            AAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCAT                                                                   >  SRR4302545.7089566/1‑94 (MQ=60)
                            AAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCAT                                                                   >  SRR4302545.31936/1‑94 (MQ=60)
                             AACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATA                                                                  <  SRR4302545.4474127/94‑1 (MQ=60)
                              ACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATAT                                                                 <  SRR4302545.790907/94‑1 (MQ=60)
                              ACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATAT                                                                 >  SRR4302545.2588322/1‑94 (MQ=60)
                              ACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATAT                                                                 <  SRR4302545.1685469/94‑1 (MQ=60)
                              ACTAAGCAAAACTTGGTCGATGGTTGTTACCCTATCGAAAATGAAAAATAAATTACAACTTATCTTGATAAAGGGTAGATGCTATTATCAATAT                                                                 >  SRR4302545.10357558/1‑94 (MQ=36)
                               CTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATC                                                                <  SRR4302545.10147710/94‑1 (MQ=60)
                                TCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCT                                                               <  SRR4302545.7270079/94‑1 (MQ=60)
                                TCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCT                                                               <  SRR4302545.3402474/94‑1 (MQ=60)
                                  AGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGC                                                             <  SRR4302545.5000779/94‑1 (MQ=60)
                                    CAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCAC                                                           <  SRR4302545.3556792/94‑1 (MQ=60)
                                     AAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACC                                                          >  SRR4302545.7405751/1‑94 (MQ=60)
                                     AAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACC                                                          >  SRR4302545.9497750/1‑94 (MQ=60)
                                      AAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCT                                                         <  SRR4302545.1844038/94‑1 (MQ=60)
                                        ACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCA                                                       <  SRR4302545.6623468/94‑1 (MQ=60)
                                        ACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCA                                                       <  SRR4302545.5413077/94‑1 (MQ=60)
                                         CCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAG                                                      <  SRR4302545.58265/94‑1 (MQ=60)
                                         CCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAG                                                      <  SRR4302545.2524157/94‑1 (MQ=60)
                                         CCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAG                                                      <  SRR4302545.5652318/94‑1 (MQ=60)
                                         CCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAG                                                      >  SRR4302545.667971/1‑94 (MQ=60)
                                          CTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGG                                                     <  SRR4302545.4814356/94‑1 (MQ=60)
                                          CTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGG                                                     >  SRR4302545.4801873/1‑94 (MQ=60)
                                           TGATCTATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGC                                                    <  SRR4302545.1480891/94‑1 (MQ=60)
                                           TGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGGAATTATCCATATCTGCACCTCAGGC                                                    <  SRR4302545.9741340/94‑1 (MQ=60)
                                           TGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGC                                                    >  SRR4302545.5423147/1‑94 (MQ=60)
                                           TGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGC                                                    >  SRR4302545.3920601/1‑94 (MQ=60)
                                           TGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGC                                                    >  SRR4302545.5761295/1‑94 (MQ=60)
                                           TGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTAGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGC                                                    >  SRR4302545.2059283/1‑94 (MQ=60)
                                            GATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCA                                                   >  SRR4302545.1784127/1‑94 (MQ=60)
                                             ATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCAT                                                  >  SRR4302545.6524084/1‑94 (MQ=60)
                                              TCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATG                                                 >  SRR4302545.10471067/1‑94 (MQ=60)
                                               CGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGG                                                >  SRR4302545.6253478/1‑94 (MQ=60)
                                               CGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGG                                                <  SRR4302545.3023290/94‑1 (MQ=60)
                                                GATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGT                                               >  SRR4302545.3433532/1‑94 (MQ=60)
                                                GATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGT                                               >  SRR4302545.350846/1‑94 (MQ=60)
                                                GATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGT                                               <  SRR4302545.5906258/94‑1 (MQ=60)
                                                 ATGGTTGTGACCCTATCGAAAAAGAAAAACAAATTACAATTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCAGGGTT                                              <  SRR4302545.1434865/94‑1 (MQ=60)
                                                  TGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTA                                             <  SRR4302545.8719655/94‑1 (MQ=60)
                                                  TGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTA                                             >  SRR4302545.4141587/1‑94 (MQ=60)
                                                   GGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAA                                            <  SRR4302545.4346524/94‑1 (MQ=60)
                                                    GTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAA                                           <  SRR4302545.7541272/94‑1 (MQ=60)
                                                    GTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAA                                           >  SRR4302545.667063/1‑94 (MQ=60)
                                                    GTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAA                                           <  SRR4302545.380241/94‑1 (MQ=60)
                                                     TTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAA                                          <  SRR4302545.5446160/94‑1 (MQ=60)
                                                      TGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAAT                                         >  SRR4302545.2096644/1‑94 (MQ=60)
                                                      TGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAAT                                         >  SRR4302545.5523097/1‑94 (MQ=60)
                                                       GTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATA                                        <  SRR4302545.10478115/94‑1 (MQ=60)
                                                       GTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATA                                        >  SRR4302545.8076123/1‑94 (MQ=60)
                                                       GTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATA                                        >  SRR4302545.6476781/1‑94 (MQ=60)
                                                        TTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATAC                                       >  SRR4302545.9921022/1‑94 (MQ=60)
                                                         TACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACA                                      >  SRR4302545.9003630/1‑94 (MQ=60)
                                                         TACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACA                                      >  SRR4302545.679421/1‑94 (MQ=60)
                                                         TACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACA                                      <  SRR4302545.6901488/94‑1 (MQ=60)
                                                          ACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAA                                     <  SRR4302545.8815680/94‑1 (MQ=60)
                                                          ACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAA                                     <  SRR4302545.7448996/94‑1 (MQ=60)
                                                           CCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAA                                    <  SRR4302545.6838096/94‑1 (MQ=60)
                                                           CCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAA                                    <  SRR4302545.4447718/94‑1 (MQ=60)
                                                            TCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAG                                   >  SRR4302545.5674122/1‑94 (MQ=60)
                                                             CTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGA                                  >  SRR4302545.6823318/1‑94 (MQ=60)
                                                             CTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGA                                  <  SRR4302545.1550078/94‑1 (MQ=60)
                                                             CTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGA                                  >  SRR4302545.7987290/1‑94 (MQ=60)
                                                             CTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGA                                  <  SRR4302545.1443276/94‑1 (MQ=60)
                                                              TATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGAT                                 >  SRR4302545.385609/1‑94 (MQ=60)
                                                              TATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGAT                                 <  SRR4302545.945982/94‑1 (MQ=60)
                                                              TATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGAT                                 <  SRR4302545.325203/94‑1 (MQ=60)
                                                               ATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATG                                >  SRR4302545.3340494/1‑94 (MQ=60)
                                                               ATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATG                                <  SRR4302545.4532167/94‑1 (MQ=60)
                                                               ATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATG                                >  SRR4302545.1384550/1‑94 (MQ=60)
                                                               ATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATG                                <  SRR4302545.1321536/94‑1 (MQ=60)
                                                                TCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGC                               >  SRR4302545.6159141/1‑94 (MQ=60)
                                                                 CGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCA                              >  SRR4302545.2629762/1‑94 (MQ=60)
                                                                 CGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCA                              <  SRR4302545.6042450/94‑1 (MQ=60)
                                                                  GAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAA                             <  SRR4302545.9930267/94‑1 (MQ=60)
                                                                  GAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAA                             >  SRR4302545.4070263/1‑94 (MQ=60)
                                                                  GAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAA                             >  SRR4302545.10496096/1‑94 (MQ=60)
                                                                  GAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAA                             >  SRR4302545.5295611/1‑94 (MQ=60)
                                                                  GAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAA                             >  SRR4302545.3273003/1‑94 (MQ=60)
                                                                   AAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAA                            >  SRR4302545.1566512/1‑94 (MQ=60)
                                                                    AAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAAC                           <  SRR4302545.3737523/94‑1 (MQ=60)
                                                                    AAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAAC                           >  SRR4302545.1284581/1‑94 (MQ=60)
                                                                    AAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAAC                           >  SRR4302545.6561487/1‑94 (MQ=60)
                                                                     AAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAATATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAAGACAAAGATGCAtacg                          <  SRR4302545.3715747/94‑5 (MQ=60)
                                                                     AAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACT                          >  SRR4302545.10596008/1‑94 (MQ=60)
                                                                     AAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACT                          <  SRR4302545.3083113/94‑1 (MQ=60)
                                                                     AAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACT                          <  SRR4302545.3587163/94‑1 (MQ=60)
                                                                     AAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACT                          >  SRR4302545.4817661/1‑94 (MQ=60)
                                                                     AAAGAAAAACAAATTACAACTTAGCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACT                          <  SRR4302545.6379174/94‑1 (MQ=60)
                                                                      AAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTG                         <  SRR4302545.10414990/94‑1 (MQ=60)
                                                                      AAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTG                         >  SRR4302545.9756079/1‑94 (MQ=60)
                                                                       AGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGG                        <  SRR4302545.8135276/94‑1 (MQ=60)
                                                                        GAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGA                       <  SRR4302545.5000129/94‑1 (MQ=60)
                                                                         AAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGAC                      >  SRR4302545.7025747/1‑94 (MQ=60)
                                                                         AAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGAC                      <  SRR4302545.6449314/94‑1 (MQ=60)
                                                                          AAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACG                     <  SRR4302545.3111612/94‑1 (MQ=60)
                                                                          AAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACG                     <  SRR4302545.9117220/94‑1 (MQ=60)
                                                                          AAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACG                     >  SRR4302545.6273113/1‑94 (MQ=60)
                                                                          AAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACG                     >  SRR4302545.4295854/1‑94 (MQ=60)
                                                                          AAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACG                     <  SRR4302545.4226786/94‑1 (MQ=60)
                                                                          AAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACG                     >  SRR4302545.118734/1‑94 (MQ=60)
                                                                           AAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGC                    <  SRR4302545.7186778/94‑1 (MQ=60)
                                                                            AACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCC                   >  SRR4302545.10045799/1‑94 (MQ=60)
                                                                            AACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCC                   >  SRR4302545.10826573/1‑94 (MQ=60)
                                                                            AACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCC                   >  SRR4302545.8352917/1‑94 (MQ=60)
                                                                            AACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCC                   <  SRR4302545.9823090/94‑1 (MQ=60)
                                                                              CAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTC                 >  SRR4302545.8305017/1‑94 (MQ=60)
                                                                              CAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTC                 >  SRR4302545.2463686/1‑94 (MQ=60)
                                                                              CAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTC                 >  SRR4302545.7855916/1‑94 (MQ=60)
                                                                              CAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTC                 <  SRR4302545.1994720/94‑1 (MQ=60)
                                                                              CAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTC                 >  SRR4302545.616817/1‑94 (MQ=60)
                                                                               AAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCC                >  SRR4302545.8396470/1‑94 (MQ=60)
                                                                               AAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCC                >  SRR4302545.5717894/1‑94 (MQ=60)
                                                                                AATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCT               <  SRR4302545.5799133/94‑1 (MQ=60)
                                                                                 ATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTG              <  SRR4302545.6763899/94‑1 (MQ=60)
                                                                                  TTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACG‑CTCCTGAA            >  SRR4302545.2332838/1‑94 (MQ=60)
                                                                                   TACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAA            <  SRR4302545.367364/94‑1 (MQ=60)
                                                                                    ACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAAC           >  SRR4302545.5673920/1‑94 (MQ=60)
                                                                                    ACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAAC           >  SRR4302545.4289147/1‑94 (MQ=60)
                                                                                    ACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAAC           >  SRR4302545.8489066/1‑94 (MQ=60)
                                                                                     CAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACT          >  SRR4302545.7434460/1‑94 (MQ=60)
                                                                                     CAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACT          <  SRR4302545.3233775/94‑1 (MQ=60)
                                                                                      AACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTT         <  SRR4302545.8497990/94‑1 (MQ=60)
                                                                                       ACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGACCTTT        >  SRR4302545.6586973/1‑94 (MQ=60)
                                                                                       ACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTT        >  SRR4302545.8010860/1‑94 (MQ=60)
                                                                                       ACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTT        <  SRR4302545.4737564/94‑1 (MQ=60)
                                                                                        CTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTG       <  SRR4302545.1939507/94‑1 (MQ=60)
                                                                                        CTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTG       <  SRR4302545.3066091/94‑1 (MQ=60)
                                                                                        CTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTG       >  SRR4302545.10773141/1‑94 (MQ=60)
                                                                                           ATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGTACGCCTCCTGAACTTTGGAA    <  SRR4302545.9292212/94‑1 (MQ=60)
                                                                                           ATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAA    >  SRR4302545.9562637/1‑94 (MQ=60)
                                                                                           ATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAA    >  SRR4302545.4628671/1‑94 (MQ=60)
                                                                                           ATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAA    >  SRR4302545.10206239/1‑94 (MQ=60)
                                                                                            TCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAAT   >  SRR4302545.2815803/1‑94 (MQ=60)
                                                                                            TCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAAT   <  SRR4302545.7812545/94‑1 (MQ=60)
                                                                                             CTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATC  >  SRR4302545.394368/1‑94 (MQ=60)
                                                                                             CTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATC  >  SRR4302545.8520952/1‑94 (MQ=60)
                                                                                             CTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATC  <  SRR4302545.5332038/94‑1 (MQ=60)
                                                                                             |                                                                                             
TTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATTTCGATAAAGGGAAAATGCAATTATCCATATTTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATC  >  NC_000913/3185683‑3185869

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑