Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,987,586 2 bp→GC coding (814‑815/963 nt) hemC ← porphobilinogen deaminase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,987,5860CG99.8% 1711.6 / NA 501R272A (CGG→GCG) hemCporphobilinogen deaminase
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (281/219);  total (281/220)
Fisher's exact test for biased strand distribution p-value = 4.39e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*NC_0009133,987,5870GC100.0% 1720.4 / NA 502R272A (CGG→GCG) hemCporphobilinogen deaminase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (281/221);  total (281/221)

Only 100 of 530 total aligned reads displayed.

TAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCACCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCCGGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACATCCGCCTTCGAGACGGGT  >  NC_000913/3987498‑3987674
                                                                                        ||                                                                                       
 aGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGa                                                                                    >  2:9821537/1‑94 (MQ=255)
 aGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGa                                                                                    >  2:9660368/1‑94 (MQ=255)
 aGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGa                                                                                    <  1:5172671/94‑1 (MQ=255)
   ctctTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGAcc                                                                                  <  2:10071983/94‑1 (MQ=255)
   ctctTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGAcc                                                                                  >  2:5107167/1‑94 (MQ=255)
   ctctTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGAcc                                                                                  <  2:3973485/94‑1 (MQ=255)
   ctctTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGAcc                                                                                  <  1:6845505/94‑1 (MQ=255)
    tcttctGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCACCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCa                                                                                 >  1:8954546/1‑94 (MQ=255)
     cttctGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAg                                                                                >  1:6393904/1‑94 (MQ=255)
     cttctGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAg                                                                                >  2:10166960/1‑94 (MQ=255)
      ttctGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAgc                                                                               <  1:3539990/94‑1 (MQ=255)
         tGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCCCCGACCAgccac                                                                            >  1:8511021/1‑91 (MQ=255)
            cAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGcgcacgc                                                                         >  2:10217200/1‑94 (MQ=255)
             cgCGAAATGCCTATTTGGTCGGCATCTTGCGGCGCTCCGCGGCGTTCAGCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGcgcacgca                                                                        <  2:5984649/93‑1 (MQ=255)
             aGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGcgcacgca                                                                        <  2:4244334/94‑1 (MQ=255)
              gCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAg                                                                       <  1:4986778/94‑1 (MQ=255)
                gAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGcc                                                                     >  1:10510287/1‑94 (MQ=255)
                gAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGcc                                                                     >  1:1071166/1‑94 (MQ=255)
                  aaTCCCCATTTGTTCGGCATCTTGCGGCGCTCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAg                                                                   <  2:8954590/94‑1 (MQ=255)
                    tCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGAt                                                                 <  2:10487475/94‑1 (MQ=255)
                     ccccATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGAtt                                                                >  2:6412054/1‑94 (MQ=255)
                     ccccATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGAtt                                                                <  2:741897/94‑1 (MQ=255)
                     ccccATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGAtt                                                                >  1:10171758/1‑94 (MQ=255)
                      cccATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGAttt                                                               <  1:7206245/94‑1 (MQ=255)
                      cccATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGAttt                                                               <  1:10069548/94‑1 (MQ=255)
                      cccATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGAttt                                                               >  1:2902712/1‑94 (MQ=255)
                       ccATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTc                                                              >  2:9241390/1‑94 (MQ=255)
                       ccATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTc                                                              <  2:8582518/94‑1 (MQ=255)
                       ccATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTc                                                              >  2:2498213/1‑94 (MQ=255)
                        cATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCg                                                             <  1:4457037/94‑1 (MQ=255)
                        cATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCg                                                             >  2:7632772/1‑94 (MQ=255)
                         aTTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGc                                                            >  2:3353599/1‑94 (MQ=255)
                         aTTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGc                                                            <  1:809678/94‑1 (MQ=255)
                         aTTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGc                                                            >  1:8841403/1‑94 (MQ=255)
                         aTTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGc                                                            >  1:839134/1‑94 (MQ=255)
                          tttGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGcc                                                           >  2:10586326/1‑94 (MQ=255)
                           ttGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCa                                                          >  1:4903337/1‑94 (MQ=255)
                            tGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGGCCAGCGCACGCAGCCAGATTTCGCCAt                                                         <  2:4678893/94‑1 (MQ=255)
                            tGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCGCGCAGCCAGATTTCGCCAt                                                         >  2:5405924/1‑94 (MQ=255)
                            tGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCAt                                                         >  1:7021281/1‑94 (MQ=255)
                               tCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTTCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATaaa                                                      >  2:3090428/1‑94 (MQ=255)
                                 ggCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATa                                                    <  1:10023237/94‑1 (MQ=255)
                                  gCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATaa                                                   >  1:5408389/1‑94 (MQ=255)
                                   cATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAg                                                  <  2:4825040/94‑1 (MQ=255)
                                   cATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAg                                                  >  2:8889845/1‑94 (MQ=255)
                                    aTCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGc                                                 >  2:2237660/1‑94 (MQ=255)
                                     tCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCt                                                >  1:1038050/1‑94 (MQ=255)
                                       ttGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCg                                              >  1:5970025/1‑94 (MQ=255)
                                       ttGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCg                                              >  1:212740/1‑94 (MQ=255)
                                         gcggcgCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGc                                            <  1:2313283/94‑1 (MQ=255)
                                          tggcgCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCg                                           >  1:3055196/2‑94 (MQ=255)
                                          cggcgCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGca                                           <  1:9576842/94‑2 (MQ=255)
                                              gcgccGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGc                                       <  1:9191613/91‑1 (MQ=255)
                                               cgccGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCt                                      >  2:9321671/3‑94 (MQ=255)
                                                gccGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTa                                     >  1:370772/2‑94 (MQ=255)
                                                gccGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTa                                     >  2:4507516/2‑94 (MQ=255)
                                                cccGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTa                                     <  2:8085759/93‑1 (MQ=255)
                                                cccGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCCACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTa                                     <  2:1455387/93‑1 (MQ=255)
                                                  cgcgGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTAcc                                   >  1:937716/1‑94 (MQ=255)
                                                  cgcgGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTAcc                                   >  2:7764906/1‑94 (MQ=255)
                                                  cgcgGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTAcc                                   >  1:6602656/1‑94 (MQ=255)
                                                   gcggcgTCCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCa                                  <  1:2728023/94‑1 (MQ=255)
                                                     ggcgTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAAt                                >  1:1680949/1‑94 (MQ=255)
                                                       cgTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTg                              >  2:8773729/1‑94 (MQ=255)
                                                        gTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTgg                             <  1:7483301/94‑1 (MQ=255)
                                                        gTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTgg                             >  1:6260184/1‑94 (MQ=255)
                                                         ttCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGc                            >  2:4364702/1‑94 (MQ=255)
                                                         ttCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGc                            >  2:6877796/1‑94 (MQ=255)
                                                          tCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCa                           <  2:3739859/94‑1 (MQ=255)
                                                             ccGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCt                        <  2:210160/94‑1 (MQ=255)
                                                              cgcgAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTg                       <  2:8342711/94‑1 (MQ=255)
                                                              cgcgAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTg                       >  2:3223185/1‑94 (MQ=255)
                                                              cgcgAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTg                       >  1:6129629/1‑94 (MQ=255)
                                                              cgcgAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTg                       >  1:7870351/1‑94 (MQ=255)
                                                               gcgAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGa                      <  1:5763087/94‑1 (MQ=255)
                                                               gcgAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGa                      <  1:1296485/94‑1 (MQ=255)
                                                                 gAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACa                    >  2:4155132/1‑94 (MQ=255)
                                                                 gAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACa                    >  2:2739297/1‑94 (MQ=255)
                                                                  aataatCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACAt                   <  2:6977165/94‑1 (MQ=255)
                                                                  aataatCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACAt                   >  1:9901831/1‑94 (MQ=255)
                                                                   ataatCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACATc                  >  1:4838374/1‑94 (MQ=255)
                                                                    taatCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACATcc                 <  1:5493688/94‑1 (MQ=255)
                                                                    taatCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACATcc                 <  1:1780194/94‑1 (MQ=255)
                                                                    taatCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACATcc                 <  1:4245447/94‑1 (MQ=255)
                                                                      atCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACATCCGc               >  2:5824697/1‑94 (MQ=255)
                                                                      atCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACATCCGc               >  2:1317634/1‑94 (MQ=255)
                                                                      atCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACATCCGc               >  1:9716909/1‑94 (MQ=255)
                                                                        cTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACATCCGCCt             >  2:6186401/1‑94 (MQ=255)
                                                                        cTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACATCCGCCt             <  2:4923373/94‑1 (MQ=255)
                                                                        cTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACATCCGCCt             <  1:3902610/94‑1 (MQ=255)
                                                                          gCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACATCCGCCTTc           >  2:3435727/1‑94 (MQ=255)
                                                                           cGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACATCCGCCTTCg          >  1:4722281/1‑94 (MQ=255)
                                                                           cGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACATCCGCCTTCg          <  1:1483028/94‑1 (MQ=255)
                                                                            gAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACATCCGCCTTCga         >  2:5641827/1‑94 (MQ=255)
                                                                             aaCCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACATCCGCCTTCgag        >  1:331149/1‑94 (MQ=255)
                                                                               ccGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACATCCGCCTTCGAGAc      >  1:8229743/1‑94 (MQ=255)
                                                                                 ctCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACATCCGCCTTCGAGACgg    <  2:6650360/93‑1 (MQ=255)
                                                                                  tCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACATCCGCCTTCGAGACggg   >  2:3572290/1‑94 (MQ=255)
                                                                                   ccggcgcgCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACATCCGCCTTCGAGACGGGt  <  2:709235/94‑1 (MQ=255)
                                                                                   ccggcgcgCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACATCCGCCTTCGAGACGGGt  <  2:1948276/94‑1 (MQ=255)
                                                                                        ||                                                                                       
TAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCACCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCCGGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTAGCTACCAATTGGCACCTGACATCCGCCTTCGAGACGGGT  >  NC_000913/3987498‑3987674

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 306 total aligned reads displayed.
GGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAAGCCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTGCTCAGG  >  NC_000913/3987729‑3987915
                                                                                             |                                                                                             
GGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAAC                                                                                               <  SRR4302545.3706703/94‑1 (MQ=60)
GGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAAC                                                                                               <  SRR4302545.3971327/94‑1 (MQ=60)
GGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAAC                                                                                               >  SRR4302545.4536953/1‑94 (MQ=60)
GGCAAGCAGCTCGCGAGTACGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACTGCCGGAAGAGAAATCTCGGGTGGCAAC                                                                                               <  SRR4302545.5791994/94‑1 (MQ=60)
     ccacttcgctgttgcgaGAATCATCAAGGCGGCATTCAATGCCCACCGCACCTTGTCCGACCGCCGAAAGAGAAATCTCGGGTGGCAACGCGGC                                                                                          <  SRR4302545.7156810/77‑1 (MQ=60)
     GCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGC                                                                                          <  SRR4302545.8267158/94‑1 (MQ=60)
     GCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGC                                                                                          <  SRR4302545.3499241/94‑1 (MQ=60)
      CAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCG                                                                                         >  SRR4302545.10281817/1‑94 (MQ=60)
      CAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCG                                                                                         >  SRR4302545.684145/1‑94 (MQ=60)
       AGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGC                                                                                        >  SRR4302545.7221326/1‑94 (MQ=60)
        GCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAACTCTCGGGTGGCAACGCGGCGCG                                                                                       <  SRR4302545.6946643/94‑1 (MQ=60)
        GCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCG                                                                                       >  SRR4302545.10773543/1‑94 (MQ=60)
        GCGCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCG                                                                                       <  SRR4302545.9133250/94‑1 (MQ=60)
         CTCGCGAGTTCATGAATCATCAAGGCGGCATTCAATCCCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGA                                                                                      <  SRR4302545.1885426/94‑1 (MQ=60)
         CTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGA                                                                                      <  SRR4302545.1885428/94‑1 (MQ=60)
          TCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAA                                                                                     <  SRR4302545.2490830/94‑1 (MQ=60)
           CGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGCAT                                                                                    >  SRR4302545.4014134/1‑94 (MQ=60)
           CGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAAT                                                                                    >  SRR4302545.1733445/1‑94 (MQ=60)
           CGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAAT                                                                                    <  SRR4302545.10880398/94‑1 (MQ=60)
           CGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAAT                                                                                    <  SRR4302545.6716559/94‑1 (MQ=60)
             CGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATAC                                                                                  >  SRR4302545.1366876/1‑94 (MQ=60)
             CGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATAC                                                                                  >  SRR4302545.5093294/1‑94 (MQ=60)
             CGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATAC                                                                                  >  SRR4302545.2464468/1‑94 (MQ=60)
              GAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACG                                                                                 <  SRR4302545.2520448/94‑1 (MQ=60)
               AGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGT                                                                                <  SRR4302545.2733362/94‑1 (MQ=60)
               AGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGT                                                                                <  SRR4302545.796337/94‑1 (MQ=60)
               AGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGT                                                                                >  SRR4302545.2233246/1‑94 (MQ=60)
               AGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGT                                                                                >  SRR4302545.6116520/1‑94 (MQ=60)
               AGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGT                                                                                >  SRR4302545.451232/1‑94 (MQ=60)
                GTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTG                                                                               <  SRR4302545.9179685/94‑1 (MQ=60)
                GTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTG                                                                               <  SRR4302545.1657103/94‑1 (MQ=60)
                 TGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGA                                                                              <  SRR4302545.9011874/94‑1 (MQ=60)
                   GGTGAATCATCAAGGCGGCATTCAATACCCCCCGCCCCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACT                                                                            <  SRR4302545.7958687/94‑1 (MQ=60)
                   CGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACT                                                                            >  SRR4302545.3129036/1‑94 (MQ=60)
                   CGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACT                                                                            >  SRR4302545.9532192/1‑94 (MQ=60)
                    GTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTC                                                                           <  SRR4302545.3460091/94‑1 (MQ=60)
                     TGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCC                                                                          <  SRR4302545.3376403/94‑1 (MQ=60)
                      GAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCA                                                                         <  SRR4302545.9246048/94‑1 (MQ=60)
                       AATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAG                                                                        <  SRR4302545.10366641/94‑1 (MQ=60)
                       AATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAG                                                                        <  SRR4302545.5923304/94‑1 (MQ=60)
                         TCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGAC                                                                      <  SRR4302545.9512341/94‑1 (MQ=60)
                         TCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGAC                                                                      <  SRR4302545.2953068/94‑1 (MQ=60)
                         TCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGAC                                                                      <  SRR4302545.9512343/94‑1 (MQ=60)
                          CATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGCGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACC                                                                     >  SRR4302545.3143788/1‑94 (MQ=60)
                          CATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACC                                                                     >  SRR4302545.8697886/1‑94 (MQ=60)
                           ATCAAGGCGTCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCT                                                                    <  SRR4302545.8603665/94‑1 (MQ=60)
                           ATCAAGGCGGCATTCAATACCCACCGCACCTTGTCGTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCT                                                                    >  SRR4302545.679517/1‑94 (MQ=60)
                           ATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCT                                                                    >  SRR4302545.103810/1‑94 (MQ=60)
                           ATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAAACTCGGGTGGCAACGCGGCGCGCATACGTGACTCCAGACCA                                                                    >  SRR4302545.10677210/1‑94 (MQ=60)
                             CAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAA                                                                  <  SRR4302545.10494533/94‑1 (MQ=60)
                             CAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAA                                                                  >  SRR4302545.6589242/1‑94 (MQ=60)
                              AAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGTAACGCGGCGCGAATACGTGACTCCAGACCTAAA                                                                 >  SRR4302545.9655028/1‑94 (MQ=60)
                              AAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAA                                                                 >  SRR4302545.7614050/1‑94 (MQ=60)
                               AGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAAC                                                                >  SRR4302545.7406800/1‑94 (MQ=60)
                                GGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGCATACGTGAGTGCAGACCTAAACG                                                               >  SRR4302545.279077/1‑94 (MQ=60)
                                GGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACG                                                               >  SRR4302545.2887539/1‑94 (MQ=60)
                                GGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACG                                                               >  SRR4302545.8078843/1‑94 (MQ=60)
                                GGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACG                                                               <  SRR4302545.3373566/94‑1 (MQ=60)
                                  CGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTT                                                             >  SRR4302545.7054910/1‑94 (MQ=60)
                                    GCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTT                                                           >  SRR4302545.5954138/1‑94 (MQ=60)
                                    GCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTT                                                           <  SRR4302545.5934753/94‑1 (MQ=60)
                                    GCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTT                                                           <  SRR4302545.2573280/94‑1 (MQ=60)
                                    GCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTT                                                           >  SRR4302545.6630670/1‑94 (MQ=60)
                                    GCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTT                                                           <  SRR4302545.6345193/94‑1 (MQ=60)
                                     CATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTA                                                          <  SRR4302545.6006021/94‑1 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                         >  SRR4302545.10027153/1‑94 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                         <  SRR4302545.1490371/94‑1 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                         >  SRR4302545.8837929/1‑94 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                         >  SRR4302545.9288817/1‑94 (MQ=60)
                                       TTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGT                                                        >  SRR4302545.1035936/1‑94 (MQ=60)
                                       TTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGT                                                        >  SRR4302545.7660191/1‑94 (MQ=60)
                                        TCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTC                                                       >  SRR4302545.3102142/1‑94 (MQ=60)
                                        TCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTC                                                       >  SRR4302545.2142660/1‑94 (MQ=60)
                                         CAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCC                                                      <  SRR4302545.7903875/94‑1 (MQ=60)
                                         CAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCC                                                      <  SRR4302545.2558604/94‑1 (MQ=60)
                                         CAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCC                                                      <  SRR4302545.4891650/94‑1 (MQ=60)
                                         CAATACCCACCGCACCTTGTCCTACAGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCC                                                      >  SRR4302545.10451575/1‑94 (MQ=60)
                                          AATCCCCCCCGCACCTTGCCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCG                                                     <  SRR4302545.8939971/94‑1 (MQ=60)
                                          AATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCG                                                     <  SRR4302545.10715713/94‑1 (MQ=60)
                                           ATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGG                                                    <  SRR4302545.4810039/94‑1 (MQ=60)
                                            TACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGCC                                                   <  SRR4302545.6646274/94‑1 (MQ=60)
                                             ACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCT                                                  >  SRR4302545.228876/1‑94 (MQ=60)
                                             ACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCT                                                  >  SRR4302545.8399560/1‑94 (MQ=60)
                                             ACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCT                                                  <  SRR4302545.3951375/94‑1 (MQ=60)
                                             ACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCT                                                  <  SRR4302545.1716656/94‑1 (MQ=60)
                                              CCCACCGCTCCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTA                                                 <  SRR4302545.5304509/94‑1 (MQ=60)
                                              CCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGAGTCCAGACCTAAACGTTTTAGTCCGGCTA                                                 >  SRR4302545.8987763/1‑94 (MQ=60)
                                               CCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTAC                                                >  SRR4302545.7709028/1‑94 (MQ=60)
                                               CCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTAC                                                <  SRR4302545.4475021/94‑1 (MQ=60)
                                                CGCCGCACCTTGTCCTCCCGTCGAAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGCCCTAAACGTTTTAGTCCGGCTACG                                               <  SRR4302545.4939078/94‑1 (MQ=60)
                                                CACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACG                                               >  SRR4302545.2778365/1‑94 (MQ=60)
                                                CACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACG                                               >  SRR4302545.6622927/1‑94 (MQ=60)
                                                CACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACG                                               >  SRR4302545.1667752/1‑94 (MQ=60)
                                                CACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACG                                               <  SRR4302545.3235518/94‑1 (MQ=60)
                                                CACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACG                                               <  SRR4302545.3448277/94‑1 (MQ=60)
                                                 ACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGG                                              <  SRR4302545.812467/94‑1 (MQ=60)
                                                 ACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGG                                              >  SRR4302545.2118286/1‑94 (MQ=60)
                                                 ACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGG                                              <  SRR4302545.3835378/94‑1 (MQ=60)
                                                  CCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGC                                             >  SRR4302545.9746724/1‑94 (MQ=60)
                                                   CGCACCTTGTCCTACCGCCGGAAGAGAAATCTCTGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGATTTAGTCCTGCTACGGCA                                            >  SRR4302545.8247332/1‑94 (MQ=60)
                                                   CGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCA                                            >  SRR4302545.352216/1‑94 (MQ=60)
                                                   CGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCA                                            <  SRR4302545.2822728/94‑1 (MQ=60)
                                                   CGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCA                                            >  SRR4302545.8028453/1‑94 (MQ=60)
                                                   CGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGAA                                            >  SRR4302545.8307577/1‑94 (MQ=60)
                                                    gcaccgtggccgatCGCCGGAAGAGAAATCTCGGGTGGTAACGCGGCGCGAAGACGTGACTCCAGACCTAAACGCTTTAGTCCGGCTATGGCAA                                           >  SRR4302545.9633002/15‑94 (MQ=60)
                                                    GCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAA                                           <  SRR4302545.3166509/94‑1 (MQ=60)
                                                    GCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAA                                           <  SRR4302545.6963768/94‑1 (MQ=60)
                                                    GCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAA                                           >  SRR4302545.9318946/1‑94 (MQ=60)
                                                     CACGTTGTCGTACCGCCGGAAGAGAAATCTCGGGTGGCAACGAGGCGCGAATACGTGACTCCAGACATAAACGTTTTAGGCCGGCgacgagaag                                          >  SRR4302545.3922155/1‑85 (MQ=60)
                                                     CACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAG                                          <  SRR4302545.5919962/94‑1 (MQ=60)
                                                     CACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAG                                          <  SRR4302545.4979581/94‑1 (MQ=60)
                                                     CACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAG                                          <  SRR4302545.5520749/94‑1 (MQ=60)
                                                     CACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGAGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCTGCTACGGCAAG                                          >  SRR4302545.8391528/1‑94 (MQ=60)
                                                      ACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGA                                         >  SRR4302545.8364605/1‑94 (MQ=60)
                                                      ACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGA                                         >  SRR4302545.7162251/1‑94 (MQ=60)
                                                      ACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGA                                         >  SRR4302545.6095146/1‑94 (MQ=60)
                                                      ACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGA                                         <  SRR4302545.2297904/94‑1 (MQ=60)
                                                      ACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGA                                         >  SRR4302545.4518148/1‑94 (MQ=60)
                                                       CCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTGCGGCTACGGCAAGAA                                        >  SRR4302545.5960819/1‑94 (MQ=60)
                                                       CCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAA                                        >  SRR4302545.4217017/1‑94 (MQ=60)
                                                       CCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAA                                        >  SRR4302545.8016984/1‑94 (MQ=60)
                                                       CCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAA                                        >  SRR4302545.10021497/1‑94 (MQ=60)
                                                       CCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAA                                        <  SRR4302545.3159757/94‑1 (MQ=60)
                                                        CTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAAT                                       >  SRR4302545.1247658/1‑94 (MQ=60)
                                                         TTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATG                                      >  SRR4302545.4642974/1‑94 (MQ=60)
                                                         TTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATG                                      >  SRR4302545.10149980/1‑94 (MQ=60)
                                                         TTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATG                                      >  SRR4302545.10278972/1‑94 (MQ=60)
                                                         TTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATG                                      <  SRR4302545.471253/94‑1 (MQ=60)
                                                            TCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATG                                   <  SRR4302545.386759/94‑1 (MQ=60)
                                                             CCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGG                                  <  SRR4302545.9872645/94‑1 (MQ=60)
                                                             CCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGG                                  <  SRR4302545.5864838/94‑1 (MQ=60)
                                                             CCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGG                                  <  SRR4302545.10518959/94‑1 (MQ=60)
                                                              CTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGC                                 <  SRR4302545.913324/94‑1 (MQ=60)
                                                              CTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGA                                 >  SRR4302545.6471689/1‑94 (MQ=60)
                                                               TACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCA                                <  SRR4302545.6145708/94‑1 (MQ=60)
                                                               TACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCA                                <  SRR4302545.9550090/94‑1 (MQ=60)
                                                               TACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCA                                <  SRR4302545.265134/94‑1 (MQ=60)
                                                               TACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCA                                >  SRR4302545.9045802/1‑94 (MQ=60)
                                                               TACCGCCGGAAGAGAAATCTCGGGTGGCAACGCAGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCA                                >  SRR4302545.9057182/1‑94 (MQ=60)
                                                                ACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCAT                               >  SRR4302545.7304243/1‑94 (MQ=60)
                                                                ACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAAAGTTTTAGTCCGGCTACGGCAAGAATGATGGCAT                               >  SRR4302545.3269291/1‑94 (MQ=60)
                                                                 CCGCCGGAAGCGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGGTTTAGTCCGGCTACTGCAAGCATGATGGTATC                              >  SRR4302545.4392036/1‑94 (MQ=60)
                                                                 CCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATC                              >  SRR4302545.4185490/1‑94 (MQ=60)
                                                                 CCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATC                              <  SRR4302545.4341560/94‑1 (MQ=60)
                                                                 ACGCCGGAAGAGAAATCTGGGGTGGCAACGCGGCGCGAATACGTGCCTCCAGGCCTAAACGTTTTAGTCCTGCTACGGCAAGAATGATGGCATC                              <  SRR4302545.8425322/94‑1 (MQ=60)
                                                                  CGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCG                             >  SRR4302545.4323803/1‑94 (MQ=60)
                                                                  CGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCG                             >  SRR4302545.1983071/1‑94 (MQ=60)
                                                                  CGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCG                             <  SRR4302545.3355470/94‑1 (MQ=60)
                                                                  CGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCG                             >  SRR4302545.4746/1‑94 (MQ=60)
                                                                  CGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCG                             >  SRR4302545.5635491/1‑94 (MQ=60)
                                                                   GCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGT                            <  SRR4302545.302436/94‑1 (MQ=60)
                                                                   GCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGT                            >  SRR4302545.4771719/1‑94 (MQ=60)
                                                                    CCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTA                           >  SRR4302545.8255308/1‑94 (MQ=60)
                                                                    CCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTA                           >  SRR4302545.3623811/1‑94 (MQ=60)
                                                                    CCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTA                           <  SRR4302545.8877708/94‑1 (MQ=60)
                                                                     CGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAT                          <  SRR4302545.5039972/94‑1 (MQ=60)
                                                                     CGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAT                          <  SRR4302545.2054077/94‑1 (MQ=60)
                                                                      GGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATT                         >  SRR4302545.2971964/1‑94 (MQ=60)
                                                                       GAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTC                        <  SRR4302545.8717595/94‑1 (MQ=60)
                                                                       GAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTC                        <  SRR4302545.3278452/94‑1 (MQ=60)
                                                                        AAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCG                       <  SRR4302545.5141888/94‑1 (MQ=60)
                                                                        AAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCG                       >  SRR4302545.8444622/1‑94 (MQ=60)
                                                                        AAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCG                       <  SRR4302545.2181892/94‑1 (MQ=60)
                                                                          GAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCC                     <  SRR4302545.3627382/94‑1 (MQ=60)
                                                                          GAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCC                     <  SRR4302545.5510837/94‑1 (MQ=60)
                                                                          GAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCC                     >  SRR4302545.8342248/1‑94 (MQ=60)
                                                                          GAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCC                     >  SRR4302545.10721882/1‑94 (MQ=60)
                                                                          GAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCC                     <  SRR4302545.10802790/94‑1 (MQ=60)
                                                                          GAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCC                     <  SRR4302545.7897753/94‑1 (MQ=60)
                                                                           AGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCG                    <  SRR4302545.1316791/94‑1 (MQ=60)
                                                                           AGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCG                    >  SRR4302545.3174922/1‑94 (MQ=60)
                                                                           AGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCG                    <  SRR4302545.9545363/94‑1 (MQ=60)
                                                                             AAATCTCGGGTTGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTT                  <  SRR4302545.2874417/94‑1 (MQ=60)
                                                                             AAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTT                  <  SRR4302545.6371885/94‑1 (MQ=60)
                                                                             AAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAACGATGGCATCGTATTCGCCGTT                  >  SRR4302545.9503300/1‑94 (MQ=60)
                                                                              AATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTA                 <  SRR4302545.3519714/94‑1 (MQ=60)
                                                                               ATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTAT                <  SRR4302545.3440077/94‑1 (MQ=60)
                                                                                TCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATC               <  SRR4302545.432684/94‑1 (MQ=60)
                                                                                TCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATC               <  SRR4302545.4995808/94‑1 (MQ=60)
                                                                                TCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATC               <  SRR4302545.9434514/94‑1 (MQ=60)
                                                                                 CTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCC              <  SRR4302545.4143148/94‑1 (MQ=60)
                                                                                 CTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCC              >  SRR4302545.5299556/1‑94 (MQ=60)
                                                                                  TCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCA             >  SRR4302545.4118025/1‑94 (MQ=60)
                                                                                  TCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCA             <  SRR4302545.2461632/94‑1 (MQ=60)
                                                                                  TCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCA             >  SRR4302545.4637513/1‑94 (MQ=60)
                                                                                  TCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCA             >  SRR4302545.6766552/1‑94 (MQ=60)
                                                                                   CGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAG            <  SRR4302545.183750/94‑1 (MQ=60)
                                                                                   CGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAG            <  SRR4302545.3294811/94‑1 (MQ=60)
                                                                                   CGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAG            <  SRR4302545.1842575/94‑1 (MQ=60)
                                                                                   CGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAG            <  SRR4302545.2002271/94‑1 (MQ=60)
                                                                                   CGGGGGGCAACGCGGCGCGAATACGTGCCTCCAGACCCAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCTGTTATCCAG            >  SRR4302545.9839200/1‑94 (MQ=60)
                                                                                     GGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTT          >  SRR4302545.316498/1‑94 (MQ=60)
                                                                                     GGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTT          <  SRR4302545.1324654/94‑1 (MQ=60)
                                                                                      GTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTT         >  SRR4302545.518579/1‑94 (MQ=60)
                                                                                       TGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTG        <  SRR4302545.4737462/94‑1 (MQ=60)
                                                                                       TGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTG        >  SRR4302545.578533/1‑94 (MQ=60)
                                                                                       TGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTG        <  SRR4302545.58621/94‑1 (MQ=60)
                                                                                        GGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTGC       >  SRR4302545.8305642/1‑94 (MQ=60)
                                                                                         GCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCTCCGTTATCCAGTTTGCT      <  SRR4302545.10126111/94‑1 (MQ=60)
                                                                                         GCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTGCT      <  SRR4302545.7384355/94‑1 (MQ=60)
                                                                                             |                                                                                             
GGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAAGCCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTGCTCAGG  >  NC_000913/3987729‑3987915

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑