Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,998,290 +G coding (379/486 nt) b4566 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,998,2891.G99.5% 2204.8 / ‑0.4 639coding (380/486 nt)b4566hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (2/1);  new base G (354/280);  total (357/282)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 709 total aligned reads displayed.

TGACTGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCA‑GACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCATA  >  NC_000913/3998196‑3998377
                                                                                               |                                                                                        
tGACTGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCa                                                                                           >  1:9518204/1‑94 (MQ=255)
tGACTGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCa                                                                                           >  1:1149752/1‑94 (MQ=255)
 gACTGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCA‑g                                                                                         >  2:3077318/1‑94 (MQ=255)
 gACTGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCA‑g                                                                                         <  2:5114712/94‑1 (MQ=255)
  aCTGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCA‑gg                                                                                        <  2:10406835/94‑2 (MQ=255)
  aCTGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCA‑gg                                                                                        <  2:4835299/94‑2 (MQ=255)
   cTGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCA‑gga                                                                                       >  1:1686802/1‑92 (MQ=255)
    tGCACCGCAAAGTGAATTTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCA‑ggac                                                                                      <  1:9239394/94‑4 (MQ=255)
    tGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCA‑ggac                                                                                      <  1:6765530/94‑4 (MQ=255)
    tGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCA‑ggac                                                                                      <  2:9026947/94‑4 (MQ=255)
       aCCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGa                                                                                    >  1:313880/1‑94 (MQ=255)
       aCCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGa                                                                                    <  2:10585164/94‑1 (MQ=255)
        ccGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGAt                                                                                   <  1:1841457/94‑1 (MQ=255)
          ccAAAATGAATTTCTTTTCTGGTTTTGAAGGGACCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATaa                                                                                 <  2:2903282/93‑1 (MQ=255)
           cAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATaaa                                                                                >  2:5410316/1‑94 (MQ=255)
           cAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATaaa                                                                                >  2:338097/1‑94 (MQ=255)
            aaaCTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACATGCCT‑CCAGGACGGATAAAg                                                                               >  1:9371212/1‑94 (MQ=255)
            aaaCTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAg                                                                               <  1:1218963/94‑1 (MQ=255)
            aaaCTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAg                                                                               >  2:3218099/1‑94 (MQ=255)
             aaCTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGa                                                                              <  1:2343407/94‑1 (MQ=255)
              aCTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGaa                                                                             <  2:6516281/94‑1 (MQ=255)
                tGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAAt                                                                           >  1:1391902/1‑94 (MQ=255)
                 gAAGCTCTTTACTGGTTTTGAAGGCATCCCGACGAACGATGCCGAGTTAATCTACGGCGACATCAAACACGCCA‑CGACAACGGATAACGAAAtt                                                                          >  2:9230781/1‑94 (MQ=255)
                    tctcTTTACTGGTTTTGAATGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTccc                                                                       <  1:4818038/94‑1 (MQ=255)
                    tctcTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTccc                                                                       <  2:3772835/94‑1 (MQ=255)
                     ctctTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCt                                                                      >  2:112844/1‑94 (MQ=255)
                     ctctTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCt                                                                      <  2:2126731/94‑1 (MQ=255)
                      tctTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCtt                                                                     >  2:2424684/1‑94 (MQ=255)
                      tctTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCtt                                                                     <  1:1032957/94‑1 (MQ=255)
                      tctTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCtt                                                                     <  1:5964134/94‑1 (MQ=255)
                      tctTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCCCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCtt                                                                     <  2:7512237/94‑1 (MQ=255)
                       ctTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAACACACGCCGCCCG‑GCCGGATAAAGCAATTCCCTTc                                                                    >  1:297697/1‑94 (MQ=255)
                       ctTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTc                                                                    <  2:8117835/94‑1 (MQ=255)
                       ctTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTc                                                                    >  2:5319572/1‑94 (MQ=255)
                         ttACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCAc                                                                  >  2:7176019/1‑94 (MQ=255)
                         ttACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCAc                                                                  <  2:4212807/94‑1 (MQ=255)
                          tACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCAcc                                                                 >  1:4198003/1‑94 (MQ=255)
                           aCTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCt                                                                <  1:7966808/94‑1 (MQ=255)
                            cTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTg                                                               <  1:2123007/94‑1 (MQ=255)
                            cTGGTGTTGAAGGCATCCAGACGAGCGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTg                                                               <  2:435505/94‑1 (MQ=255)
                             tGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGa                                                              <  2:1979197/94‑1 (MQ=255)
                              ggTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGaa                                                             <  2:364852/94‑1 (MQ=255)
                              ggTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGaa                                                             <  1:2688746/94‑1 (MQ=255)
                                ttttGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGc                                                           <  1:4438824/94‑1 (MQ=255)
                                 tttGAAGGAATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATACAGAAATTCCCTTCACCTGAAGCg                                                          >  1:6474623/1‑94 (MQ=255)
                                     aaGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGAt                                                      >  2:6379173/1‑94 (MQ=255)
                                         cATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTaa                                                  >  1:9881035/1‑94 (MQ=255)
                                          aTCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAAc                                                 <  2:6787542/94‑1 (MQ=255)
                                          aTCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAAc                                                 >  2:2938266/1‑94 (MQ=255)
                                          aTCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAAc                                                 <  2:2560519/94‑1 (MQ=255)
                                          aTCCACACGAACGATGCCGACTTTATCTCCCGCGACATAAAGCACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAAc                                                 <  1:5665851/94‑1 (MQ=255)
                                           tCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACg                                                <  2:9919965/94‑1 (MQ=255)
                                            ccAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGc                                               <  2:6201431/94‑1 (MQ=255)
                                             cAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGcc                                              >  1:1558352/1‑94 (MQ=255)
                                              aGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGccc                                             >  1:4295643/1‑93 (MQ=255)
                                              aGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCa                                             <  2:8464134/94‑1 (MQ=255)
                                                  gaacgaTGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCtt                                         >  1:7374761/1‑94 (MQ=255)
                                                  gaacgaTGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCtt                                         >  2:4981497/1‑94 (MQ=255)
                                                   aacgaTGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTc                                        >  1:6226640/1‑94 (MQ=255)
                                                   aacgaTGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTc                                        >  1:5065026/1‑94 (MQ=255)
                                                    acgaTGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTct                                       <  1:1067656/94‑1 (MQ=255)
                                                    acgaTGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTct                                       >  1:3459454/1‑94 (MQ=255)
                                                    acgaTGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTct                                       >  1:10440972/1‑94 (MQ=255)
                                                     cgaTGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTctc                                      >  1:705037/1‑93 (MQ=255)
                                                     cgaTCCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTctg                                      <  2:3957893/94‑1 (MQ=255)
                                                      gaTGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTctgc                                     >  2:6890839/1‑94 (MQ=255)
                                                       aTGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTctgct                                    <  1:10009195/94‑1 (MQ=255)
                                                          ccGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGAc                                 >  1:8968816/1‑94 (MQ=255)
                                                           cGACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGAcc                                <  1:2591380/94‑1 (MQ=255)
                                                            gACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCg                               >  1:5796010/1‑94 (MQ=255)
                                                            gACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCg                               >  1:8384004/1‑94 (MQ=255)
                                                            gACTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCg                               <  2:8683136/94‑1 (MQ=255)
                                                              cTTTATCTCCCGCGACATAAACCACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGtt                             <  1:7149735/94‑1 (MQ=255)
                                                              cTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGtt                             >  2:9766613/1‑94 (MQ=255)
                                                              cTTTATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGtt                             >  2:1289354/1‑94 (MQ=255)
                                                               tttATCTCCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGttt                            >  2:7352257/1‑94 (MQ=255)
                                                                    ctcCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGAt                       >  2:1923537/1‑94 (MQ=255)
                                                                    ctcCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGAt                       <  2:16796/94‑1 (MQ=255)
                                                                     tcCCGCGACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATg                      <  2:8310830/94‑1 (MQ=255)
                                                                        cgcgACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTAc                   <  2:7719543/94‑1 (MQ=255)
                                                                        cgcgACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTAc                   >  1:3975006/1‑94 (MQ=255)
                                                                         gcgACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACa                  >  1:8782594/1‑94 (MQ=255)
                                                                           gACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACaaa                >  1:8213688/1‑94 (MQ=255)
                                                                           gACATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACaaa                <  1:1464952/94‑1 (MQ=255)
                                                                            aCATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAAc               >  2:7877589/1‑94 (MQ=255)
                                                                            aCATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAAc               <  1:3709705/94‑1 (MQ=255)
                                                                             cATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAAcc              <  1:5289792/94‑1 (MQ=255)
                                                                             cATAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAAcc              <  1:2812963/94‑1 (MQ=255)
                                                                              aTAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCg             >  2:7085651/1‑94 (MQ=255)
                                                                              aTAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCGGACCGTTTTCGATGTACAAACCg             <  1:6666048/94‑1 (MQ=255)
                                                                               tAAAACACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGa            <  2:5916630/94‑1 (MQ=255)
                                                                                 aaaCACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAgc          >  2:5575141/1‑94 (MQ=255)
                                                                                 aaaCACGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAgc          <  2:4670574/94‑1 (MQ=255)
                                                                                   acacGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAgcgg        <  2:10156842/94‑1 (MQ=255)
                                                                                   acacGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAgcgg        <  2:575435/94‑1 (MQ=255)
                                                                                     acGCCG‑CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAgcggcg      >  2:9400211/1‑94 (MQ=255)
                                                                                       gccg‑ccAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCa    >  2:1465200/1‑94 (MQ=255)
                                                                                       gccg‑ccAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCa    <  1:4605831/94‑1 (MQ=255)
                                                                                        ccg‑ccAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTGGATGTACAAACCGAGCGGCGCAt   >  1:7571150/1‑94 (MQ=255)
                                                                                         cg‑ccAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCATa  >  1:4487554/1‑94 (MQ=255)
                                                                                               |                                                                                        
TGACTGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCG‑CCA‑GACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCATA  >  NC_000913/3998196‑3998377

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 305 total aligned reads displayed.
GCGCGATAATAGGTAGCGAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCCGTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCCGTTCCAGCATATGGTGATTGTTCA  >  NC_000913/4001328‑4001510
                                                                                             |                                                                                         
     ATAATAGGTAGCGAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGC                                                                                      >  SRR4302545.6970827/1‑94 (MQ=60)
     ATAATAGGTAGCGAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGC                                                                                      >  SRR4302545.5937353/1‑94 (MQ=60)
     ATAATAGGTAGCGAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGC                                                                                      >  SRR4302545.5299173/1‑94 (MQ=60)
       AATAGGTAGCGAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCG                                                                                    >  SRR4302545.7409365/1‑94 (MQ=60)
       AATAGGTAGCGAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCG                                                                                    <  SRR4302545.2627650/94‑1 (MQ=60)
        ATA‑GTAGCGAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAG                                                                                  <  SRR4302545.5607358/94‑1 (MQ=60)
         TAGGTAGCGAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCAGCGCCAGCCATTGCATCCGGCGGACTCGCTCGCCGAG                                                                                  >  SRR4302545.5890780/1‑94 (MQ=60)
         AAGGTAGCGAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAG                                                                                  <  SRR4302545.3483741/94‑1 (MQ=60)
          AGGTAGCGAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGG                                                                                 >  SRR4302545.10572598/1‑94 (MQ=60)
           GGTAGCGAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGA                                                                                <  SRR4302545.624469/94‑1 (MQ=60)
            GTAGCGAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAA                                                                               >  SRR4302545.9872940/1‑94 (MQ=60)
             TAGCGAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAA                                                                              >  SRR4302545.8066906/1‑94 (MQ=60)
             TAGCGAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAA                                                                              <  SRR4302545.790914/94‑1 (MQ=60)
             TAGCGAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAA                                                                              >  SRR4302545.4818116/1‑94 (MQ=60)
             TAGCGAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAA                                                                              >  SRR4302545.2720598/1‑94 (MQ=60)
              AGCGAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAA                                                                             >  SRR4302545.4955686/1‑94 (MQ=60)
              AGCGAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAA                                                                             <  SRR4302545.2497801/94‑1 (MQ=60)
               GCGAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAAT                                                                            <  SRR4302545.9115377/94‑1 (MQ=60)
               GCGAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAAT                                                                            <  SRR4302545.2667278/94‑1 (MQ=60)
                CGAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATC                                                                           >  SRR4302545.4361884/1‑94 (MQ=60)
                 GAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCA                                                                          >  SRR4302545.5441188/1‑94 (MQ=60)
                 GAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCA                                                                          >  SRR4302545.3582831/1‑94 (MQ=60)
                 GAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCA                                                                          >  SRR4302545.10035417/1‑94 (MQ=60)
                 GAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCA                                                                          >  SRR4302545.10738044/1‑94 (MQ=60)
                  AACCAAAAGTCCACAGCTGGACTAACACGCCGCATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCAT                                                                         <  SRR4302545.3520186/94‑1 (MQ=60)
                  AACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGCAAATCAT                                                                         >  SRR4302545.9254027/1‑94 (MQ=60)
                  AACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCAT                                                                         >  SRR4302545.9254028/1‑94 (MQ=60)
                   ACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATC                                                                        >  SRR4302545.9119441/1‑94 (MQ=60)
                    CCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCC                                                                       >  SRR4302545.9427754/1‑94 (MQ=60)
                    CCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCC                                                                       <  SRR4302545.9283138/94‑1 (MQ=60)
                    CCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCC                                                                       <  SRR4302545.6234595/94‑1 (MQ=60)
                     CAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCC                                                                      >  SRR4302545.10573749/1‑94 (MQ=60)
                      AAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGCGGAAAATCATCCCC                                                                     >  SRR4302545.7431690/1‑94 (MQ=60)
                      AAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCC                                                                     >  SRR4302545.3821683/1‑94 (MQ=60)
                      AAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCC                                                                     <  SRR4302545.620541/94‑1 (MQ=60)
                      AAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCC                                                                     >  SRR4302545.10645922/1‑94 (MQ=60)
                       AAAGTCCACAGCTGGACTAACACGCCACATATCTCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCA                                                                    <  SRR4302545.7377050/94‑1 (MQ=60)
                        aacgccagagttcaactacatcgcacCATATCTCCAGAGTCGCCGCAAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAG                                                                   <  SRR4302545.9573702/68‑1 (MQ=40)
                        AAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAG                                                                   <  SRR4302545.10844261/94‑1 (MQ=60)
                        AAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAG                                                                   <  SRR4302545.1342756/94‑1 (MQ=60)
                        AAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAG                                                                   <  SRR4302545.4538496/94‑1 (MQ=60)
                        AAATCCACAGCCGGACTAACACGCCGCATATCGCCAGAATCCCCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAAGAAAATCATCCCCAG                                                                   <  SRR4302545.8852218/94‑1 (MQ=60)
                         AGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGC                                                                  <  SRR4302545.6438958/94‑1 (MQ=60)
                          GTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCA                                                                 <  SRR4302545.10231330/94‑1 (MQ=60)
                          GTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCA                                                                 <  SRR4302545.3081517/94‑1 (MQ=60)
                           gcccacagcgggacaaaccccccccatacccccaaaacccccCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCAC                                                                <  SRR4302545.4300150/52‑1 (MQ=60)
                           TCCACAGCTGGACTAACACGCCACATATCTCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCAC                                                                <  SRR4302545.834597/94‑1 (MQ=60)
                           TCCACAGCTGGACTAACACGCCACATATCGCCAGAGTCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCAC                                                                >  SRR4302545.10794089/1‑94 (MQ=60)
                            CCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACA                                                               >  SRR4302545.6820228/1‑94 (MQ=60)
                            CCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACA                                                               >  SRR4302545.7108054/1‑94 (MQ=60)
                            CCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACA                                                               >  SRR4302545.7919793/1‑94 (MQ=60)
                             CACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAA                                                              >  SRR4302545.8142244/1‑94 (MQ=60)
                             CACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAA                                                              <  SRR4302545.2731417/94‑1 (MQ=60)
                             CACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAA                                                              >  SRR4302545.2550199/1‑94 (MQ=60)
                             CACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAA                                                              >  SRR4302545.8142245/1‑94 (MQ=60)
                              CCAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAAT                                                             <  SRR4302545.9946992/94‑1 (MQ=60)
                               CAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATT                                                            >  SRR4302545.5683448/1‑94 (MQ=60)
                               CAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATG                                                            <  SRR4302545.7190889/94‑1 (MQ=60)
                               CAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATG                                                            >  SRR4302545.450964/1‑94 (MQ=60)
                               CAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATG                                                            >  SRR4302545.10145054/1‑94 (MQ=60)
                               CAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATG                                                            >  SRR4302545.8530388/1‑94 (MQ=60)
                                 GCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTT                                                          <  SRR4302545.10109123/94‑1 (MQ=60)
                                 GCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTT                                                          >  SRR4302545.10323049/1‑94 (MQ=60)
                                 GCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTA                                                          <  SRR4302545.3645051/94‑1 (MQ=60)
                                 GCGGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTT                                                          <  SRR4302545.7788216/94‑1 (MQ=60)
                                  CTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTC                                                         <  SRR4302545.1643659/94‑1 (MQ=60)
                                  CTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTC                                                         <  SRR4302545.6562751/94‑1 (MQ=60)
                                  CTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTC                                                         >  SRR4302545.1270845/1‑94 (MQ=60)
                                  CTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCCAGGAACACCATCCCCAGCACcatatta                                                         >  SRR4302545.8435773/1‑87 (MQ=60)
                                  CTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCCAGGAAAATCATCCCCAGCACCATGTTA                                                         >  SRR4302545.8435774/1‑94 (MQ=60)
                                   TGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCA                                                        >  SRR4302545.8120210/1‑94 (MQ=60)
                                     GACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACC                                                      <  SRR4302545.1973721/94‑1 (MQ=60)
                                     GACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACC                                                      <  SRR4302545.7174668/94‑1 (MQ=60)
                                     GACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACC                                                      <  SRR4302545.9234203/94‑1 (MQ=60)
                                      ACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCA                                                     <  SRR4302545.7639970/94‑1 (MQ=60)
                                      ACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCA                                                     >  SRR4302545.3639886/1‑94 (MQ=60)
                                      ACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCA                                                     <  SRR4302545.7151648/94‑1 (MQ=60)
                                      ACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCA                                                     <  SRR4302545.1751196/94‑1 (MQ=60)
                                       ataaatagcaacatatcatgAGAATCGCCGCGAGCCATTGCATCCGGCGGAATCGATCGCCGAGGAAAATCATCCCCAGCAAAATGTTCACCAG                                                    <  SRR4302545.6711989/74‑1 (MQ=60)
                                       CTAACCCGCCCCATATCCCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAG                                                    <  SRR4302545.9273539/94‑1 (MQ=60)
                                       CTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAG                                                    <  SRR4302545.3410817/94‑1 (MQ=60)
                                       CTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAG                                                    >  SRR4302545.6827128/1‑94 (MQ=60)
                                       CTAACACGCCACAAATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAG                                                    <  SRR4302545.10894543/94‑1 (MQ=60)
                                        TAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGC                                                   >  SRR4302545.368868/1‑94 (MQ=60)
                                        TAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGC                                                   >  SRR4302545.8684910/1‑94 (MQ=60)
                                         AACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCG                                                  >  SRR4302545.7019619/1‑94 (MQ=60)
                                          ACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGG                                                 <  SRR4302545.4609881/94‑1 (MQ=60)
                                           CACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGG                                                <  SRR4302545.629610/94‑1 (MQ=60)
                                           CACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGG                                                >  SRR4302545.9626059/1‑94 (MQ=60)
                                            ccccccCATATCTCCAAAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGT                                               <  SRR4302545.5154626/88‑1 (MQ=60)
                                            ACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGT                                               >  SRR4302545.2256422/1‑94 (MQ=60)
                                             CGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTT                                              >  SRR4302545.7704511/1‑94 (MQ=60)
                                             CGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGGT                                              >  SRR4302545.1457022/1‑94 (MQ=60)
                                              GCCACATGTCTCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGAGGGTTA                                             <  SRR4302545.961248/94‑1 (MQ=60)
                                              GCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTA                                             <  SRR4302545.2842872/94‑1 (MQ=60)
                                              GCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTA                                             >  SRR4302545.6624842/1‑94 (MQ=60)
                                               CCACATATCTCGAGAATCGCCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAA                                            <  SRR4302545.4987031/94‑1 (MQ=60)
                                               CCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCTCCGAGGAAAATCATCCCCAGCACAACGTTCTCCAGCGGGTTAT                                            >  SRR4302545.9659104/1‑94 (MQ=60)
                                               CCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAA                                            >  SRR4302545.8400600/1‑94 (MQ=60)
                                                CACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAAT                                           <  SRR4302545.9507367/94‑1 (MQ=60)
                                                CACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAAT                                           <  SRR4302545.6201086/94‑1 (MQ=60)
                                                  CATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAA                                         <  SRR4302545.1692717/94‑1 (MQ=60)
                                                  CATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAA                                         >  SRR4302545.9782874/1‑94 (MQ=60)
                                                   ATATCCCCAGAATCCCCCCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAA                                        <  SRR4302545.3869726/94‑1 (MQ=60)
                                                    TATCGCCAGAATCACCTCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAG                                       <  SRR4302545.7350126/94‑1 (MQ=60)
                                                    TATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAG                                       <  SRR4302545.8630220/94‑1 (MQ=60)
                                                    TATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAG                                       <  SRR4302545.895959/94‑1 (MQ=60)
                                                    TATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAG                                       >  SRR4302545.620690/1‑94 (MQ=60)
                                                     ATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGT                                      <  SRR4302545.1599852/94‑1 (MQ=60)
                                                      TCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTA                                     <  SRR4302545.9963867/94‑1 (MQ=60)
                                                      TCCCCAGAATCACCGCCGGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATCTTCACCAGCGGGTTAATAAAGTA                                     <  SRR4302545.5429235/94‑1 (MQ=60)
                                                       CGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAA                                    >  SRR4302545.9840552/1‑94 (MQ=60)
                                                       CGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAA                                    >  SRR4302545.9817931/1‑94 (MQ=60)
                                                       CGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAA                                    <  SRR4302545.6379916/94‑1 (MQ=60)
                                                       CGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAA                                    >  SRR4302545.10888587/1‑94 (MQ=60)
                                                       CGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAA                                    <  SRR4302545.630309/94‑1 (MQ=60)
                                                       CGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCACTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAA                                    <  SRR4302545.229875/94‑1 (MQ=60)
                                                        GCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAAC                                   >  SRR4302545.4453244/1‑94 (MQ=60)
                                                        GCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAAC                                   >  SRR4302545.5192314/1‑94 (MQ=60)
                                                        GCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATACCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAAC                                   >  SRR4302545.10489455/1‑94 (MQ=60)
                                                          CAGAATTACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGACGAAAATCATCCCCTGCACAATGTTCACCAGCGGGGTAATAAAGGAACCA                                 >  SRR4302545.4380505/1‑94 (MQ=60)
                                                          CAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCA                                 <  SRR4302545.3508337/94‑1 (MQ=60)
                                                          CAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCA                                 >  SRR4302545.6031714/1‑94 (MQ=60)
                                                           AGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAA                                >  SRR4302545.5276638/1‑94 (MQ=60)
                                                           AGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAA                                >  SRR4302545.5276639/1‑94 (MQ=60)
                                                           AGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAA                                >  SRR4302545.3709705/1‑94 (MQ=60)
                                                            GAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAG                               <  SRR4302545.5492525/94‑1 (MQ=60)
                                                            GAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAG                               <  SRR4302545.2180733/94‑1 (MQ=60)
                                                            GAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAG                               <  SRR4302545.9006200/94‑1 (MQ=60)
                                                            GAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACAAAG                               >  SRR4302545.10376243/1‑94 (MQ=60)
                                                            AAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAG                               <  SRR4302545.1865163/94‑1 (MQ=60)
                                                            AAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAG                               <  SRR4302545.7452318/94‑1 (MQ=60)
                                                             AATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGG                              <  SRR4302545.5116312/94‑1 (MQ=60)
                                                             AATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGG                              >  SRR4302545.644255/1‑94 (MQ=60)
                                                             AATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGG                              >  SRR4302545.3104837/1‑94 (MQ=60)
                                                             AATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGG                              >  SRR4302545.4115475/1‑94 (MQ=60)
                                                             AATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGG                              <  SRR4302545.196781/94‑1 (MQ=60)
                                                             AAGCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGG                              <  SRR4302545.8552279/94‑1 (MQ=60)
                                                              ATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGC                             <  SRR4302545.6360462/94‑1 (MQ=60)
                                                               TCCCCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCT                            <  SRR4302545.2847444/94‑1 (MQ=60)
                                                               TCCCCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAACGTTCACCAGCGGGTTAATAAAGTAACCAAGGCT                            <  SRR4302545.9052226/94‑1 (MQ=60)
                                                                CACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCTGGTTAATAAAGTAACCAAGGCTC                           >  SRR4302545.7800298/1‑94 (MQ=60)
                                                                CACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTC                           >  SRR4302545.3371666/1‑94 (MQ=60)
                                                                CACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTC                           <  SRR4302545.10519054/94‑1 (MQ=60)
                                                                CACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAATAACCAAGGCTC                           <  SRR4302545.6232756/94‑1 (MQ=60)
                                                                 CCCGCCAGCCATTTAATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCG                          <  SRR4302545.3192677/94‑1 (MQ=60)
                                                                 ACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCG                          >  SRR4302545.1221532/1‑94 (MQ=60)
                                                                 ACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCG                          >  SRR4302545.9102227/1‑94 (MQ=60)
                                                                 ACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCG                          >  SRR4302545.10204144/1‑94 (MQ=60)
                                                                 ACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCG                          <  SRR4302545.10020689/94‑1 (MQ=60)
                                                                  CCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCgc                         <  SRR4302545.8757515/94‑3 (MQ=60)
                                                                    GCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCgctt                       >  SRR4302545.3451331/1‑90 (MQ=60)
                                                                    GCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCgctt                       >  SRR4302545.6788653/1‑90 (MQ=60)
                                                                     CCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCgcttc                      >  SRR4302545.2246972/1‑89 (MQ=60)
                                                                     CCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCgcttc                      <  SRR4302545.7479988/94‑6 (MQ=60)
                                                                      CAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCC                     <  SRR4302545.2413306/94‑1 (MQ=60)
                                                                      CAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCC                     <  SRR4302545.6471652/94‑1 (MQ=60)
                                                                      CAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCC                     >  SRR4302545.3928752/1‑94 (MQ=60)
                                                                       AGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAATTCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCA                    <  SRR4302545.10940383/94‑1 (MQ=60)
                                                                       AGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCA                    >  SRR4302545.8306345/1‑94 (MQ=60)
                                                                        GCCATTGCATCCTGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGTACATAGTTCACTAGCTTGTTAATAAAGTATCCAAGGCTCgcctccag                   >  SRR4302545.9684361/1‑86 (MQ=28)
                                                                          CATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCA                 <  SRR4302545.4769399/94‑1 (MQ=60)
                                                                          CATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCA                 >  SRR4302545.646263/1‑94 (MQ=60)
                                                                           ATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCAT                <  SRR4302545.4825559/94‑1 (MQ=60)
                                                                           ATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCAT                <  SRR4302545.208695/94‑1 (MQ=60)
                                                                           ATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCAT                <  SRR4302545.7747540/94‑1 (MQ=60)
                                                                           ATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGCGTTAATAAAGTAACCAAGGCTCGCTTCCAGCAT                >  SRR4302545.3897402/1‑94 (MQ=60)
                                                                             TGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATAT              <  SRR4302545.3040759/94‑1 (MQ=60)
                                                                             TGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATAT              <  SRR4302545.5984382/94‑1 (MQ=60)
                                                                             TGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATAT              <  SRR4302545.7260943/94‑1 (MQ=60)
                                                                             TGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCCGGTTAATAAAGTAACCAATGCCCGCTTCCAGCATAT              <  SRR4302545.7260944/94‑1 (MQ=60)
                                                                              GCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATG             <  SRR4302545.8872281/94‑1 (MQ=60)
                                                                               CATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGG            >  SRR4302545.5089609/1‑94 (MQ=60)
                                                                                ATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGT           >  SRR4302545.4410109/1‑94 (MQ=60)
                                                                                ATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGT           >  SRR4302545.8335539/1‑94 (MQ=60)
                                                                                ATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGT           <  SRR4302545.8537356/94‑1 (MQ=60)
                                                                                ATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGT           <  SRR4302545.584024/94‑1 (MQ=60)
                                                                                 TCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTG          <  SRR4302545.6428900/94‑1 (MQ=60)
                                                                                 TCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTG          >  SRR4302545.5333086/1‑94 (MQ=60)
                                                                                  CCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGA         >  SRR4302545.1336559/1‑94 (MQ=60)
                                                                                   CGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGAT        <  SRR4302545.766390/94‑1 (MQ=60)
                                                                                   CGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGAT        <  SRR4302545.8585083/94‑1 (MQ=60)
                                                                                    GGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATT       >  SRR4302545.8741590/1‑94 (MQ=60)
                                                                                    GGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATT       >  SRR4302545.5787180/1‑94 (MQ=60)
                                                                                     GCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTG      <  SRR4302545.10243338/94‑1 (MQ=60)
                                                                                     GCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTG      <  SRR4302545.4283188/94‑1 (MQ=60)
                                                                                      CGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGT     <  SRR4302545.10175969/94‑1 (MQ=60)
                                                                                       GGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTT    >  SRR4302545.9326475/1‑94 (MQ=60)
                                                                                       GGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTT    <  SRR4302545.1549464/94‑1 (MQ=60)
                                                                                       GGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTT    >  SRR4302545.1783424/1‑94 (MQ=60)
                                                                                       GGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTT    <  SRR4302545.4757056/94‑1 (MQ=60)
                                                                                       GGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTT    >  SRR4302545.7532504/1‑94 (MQ=60)
                                                                                       GGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTT    >  SRR4302545.7068624/1‑94 (MQ=60)
                                                                                        GAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTC   <  SRR4302545.6870833/94‑1 (MQ=60)
                                                                                        GAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTC   >  SRR4302545.413743/1‑94 (MQ=60)
                                                                                         AATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCA  >  SRR4302545.10620908/1‑94 (MQ=60)
                                                                                         AATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCA  <  SRR4302545.9782687/94‑1 (MQ=60)
                                                                                         AATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCA  >  SRR4302545.8285280/1‑94 (MQ=60)
                                                                                         AATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCA  <  SRR4302545.10636833/94‑1 (MQ=60)
                                                                                         AATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCA  <  SRR4302545.2082675/94‑1 (MQ=60)
                                                                                             |                                                                                         
GCGCGATAATAGGTAGCGAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCCGTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCCGTTCCAGCATATGGTGATTGTTCA  >  NC_000913/4001328‑4001510

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑