Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,030,374 T→C V98A (GTG→GCG)  b3848 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,030,3740TC99.8% 1569.1 / ‑4.9 456V98A (GTG→GCG) b3848hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base C (220/235);  total (221/235)
Fisher's exact test for biased strand distribution p-value = 4.85e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.74e-01

Only 100 of 501 total aligned reads displayed.

GGTTTCTCTGACGACGGGGAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGTGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGAATCAGGCGCTGCGCCAGCT  >  NC_000913/4030283‑4030464
                                                                                           |                                                                                          
ggTTTCTCTGACGACGGGGAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCgg                                                                                          <  2:8599740/94‑1 (MQ=255)
  tttCTCTGACGACGGGGAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTa                                                                                        <  2:5827410/94‑1 (MQ=255)
  tttCTCTGACGACGGGGAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTa                                                                                        <  2:2164936/94‑1 (MQ=255)
  tttCTCTGACGACGGGGAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTa                                                                                        <  1:7432152/94‑1 (MQ=255)
  tttCTCTGACGACGGGGAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTa                                                                                        <  1:2954874/94‑1 (MQ=255)
  tttCTCTGACGACGGGGAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTa                                                                                        >  2:4356721/1‑94 (MQ=255)
  tttCTCTGACGACGGGGAGCCGGCGGGAAAGGCAGGTAAACCGATGCTCGCCCAGCTAATGTGGAGAGGCGTCGGGGGAATTACGGGTGCGGTa                                                                                        >  2:8197327/1‑94 (MQ=255)
   ttCTCTGACGACGGGGAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAg                                                                                       >  1:58608/1‑94 (MQ=255)
    tctcTGACGACGGGGAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGt                                                                                      >  1:1184469/1‑94 (MQ=255)
    tctcTGACGACGGGGAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGt                                                                                      <  2:5163717/94‑1 (MQ=255)
    tctcTGACGACGGGGAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATCGGCAGCGGCGTCGGGGGAATTACCGCTGCGGGAgg                                                                                      >  2:2051800/1‑93 (MQ=255)
       ctGACGACGGGGAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTgcg                                                                                   <  2:320447/94‑1 (MQ=255)
        tGACGACGGGGAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGGAGTgcgc                                                                                  >  1:1737983/1‑94 (MQ=255)
           cgacgGGGAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGctac                                                                               <  2:9305154/94‑1 (MQ=255)
            gacgGGGAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGctact                                                                              >  2:3871893/1‑94 (MQ=255)
            gacgGGGAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGctact                                                                              <  2:3023493/94‑1 (MQ=255)
             gcgGGGAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGctacta                                                                             <  2:8828866/93‑1 (MQ=255)
              cgGGGAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCtactac                                                                            <  2:536916/94‑1 (MQ=255)
               ggggAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGGAATTACCGCTGCGGTAGTGCGCTACTAcg                                                                           >  2:7651792/1‑94 (MQ=255)
               ggggAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTAcg                                                                           <  2:6716953/94‑1 (MQ=255)
                gggAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTAcgg                                                                          <  1:3675505/94‑1 (MQ=255)
                gggAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGGAGTGCGCTAATAcgg                                                                          >  2:546205/1‑94 (MQ=255)
                 ggAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTAcggc                                                                         <  1:7634819/94‑1 (MQ=255)
                  gAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTAcggcg                                                                        <  1:2193711/94‑1 (MQ=255)
                   aGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTAcggcgg                                                                       <  1:9954483/94‑1 (MQ=255)
                     ccGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCa                                                                     >  1:6128976/1‑94 (MQ=255)
                     ccGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCa                                                                     <  2:9155972/94‑1 (MQ=255)
                         cggGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATAtt                                                                 >  1:3248998/1‑94 (MQ=255)
                         cggGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATAtt                                                                 <  1:2757090/94‑1 (MQ=255)
                          gggAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTg                                                                >  1:9248468/1‑94 (MQ=255)
                            gAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCt                                                              <  2:5485574/94‑1 (MQ=255)
                            gAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCt                                                              <  1:5927008/94‑1 (MQ=255)
                             aaCGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCtt                                                             <  1:5577268/94‑1 (MQ=255)
                              aCGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTg                                                            >  1:3795186/1‑94 (MQ=255)
                               cGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTgg                                                           >  2:10057191/1‑94 (MQ=255)
                                ggCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGc                                                          <  2:1046111/94‑1 (MQ=255)
                                ggCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTCGGc                                                          >  2:7003981/1‑94 (MQ=255)
                                ggCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTAATACGGCGGCATATTGCTTGGc                                                          >  1:1124169/1‑94 (MQ=255)
                                   aGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCAcc                                                       >  2:7859009/1‑94 (MQ=255)
                                    ggTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCg                                                      <  2:10201352/94‑1 (MQ=255)
                                    ggTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCGGCGGTAGTGCGCTACTACGGCGGCATATGGCTTGGCACCg                                                      >  1:8089476/1‑94 (MQ=255)
                                     gTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCgg                                                     <  2:1390850/94‑1 (MQ=255)
                                       aaaCCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGTAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTg                                                   <  1:6939413/94‑1 (MQ=255)
                                       aaaCCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTg                                                   >  2:4859511/1‑94 (MQ=255)
                                        aaCCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTgg                                                  <  1:893203/94‑1 (MQ=255)
                                         aCCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTggg                                                 <  1:6540315/94‑1 (MQ=255)
                                          ccGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGt                                                <  1:10543195/94‑1 (MQ=255)
                                           cGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTggggt                                               >  1:792556/1‑92 (MQ=255)
                                           cGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGtt                                               >  1:6359234/1‑94 (MQ=255)
                                            gATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTa                                              <  1:9920430/94‑1 (MQ=255)
                                             aTGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAg                                             <  2:3375395/94‑1 (MQ=255)
                                               gCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTg                                           <  2:2304436/94‑1 (MQ=255)
                                                 tCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGaa                                         >  1:2005338/1‑94 (MQ=255)
                                                  cGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGaaa                                        >  2:6341450/1‑94 (MQ=255)
                                                   gCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAg                                       <  2:1550209/94‑1 (MQ=255)
                                                   gCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGGTAGTGAAAg                                       >  2:2517528/1‑94 (MQ=255)
                                                    cccAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGaaaac                                      >  1:3336693/1‑92 (MQ=255)
                                                    cccAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGc                                      <  2:3774912/94‑1 (MQ=255)
                                                      cAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGt                                    <  2:3475529/94‑1 (MQ=255)
                                                      cAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGt                                    <  1:4280018/94‑1 (MQ=255)
                                                       aGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTa                                   >  1:2402908/1‑94 (MQ=255)
                                                         cTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATg                                 <  1:2566872/94‑1 (MQ=255)
                                                         cTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATg                                 <  2:7365328/94‑1 (MQ=255)
                                                         cTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATg                                 >  1:6255607/1‑94 (MQ=255)
                                                          tAATGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATgg                                >  1:9439312/1‑94 (MQ=255)
                                                           aaTGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATggg                               >  2:6000289/1‑93 (MQ=255)
                                                             tGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATggcgg                             <  2:2785016/94‑1 (MQ=255)
                                                             tGGGCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATggcgg                             >  2:1853619/1‑94 (MQ=255)
                                                               ggCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATggcggcg                           <  2:9711596/94‑1 (MQ=255)
                                                               ggCAGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATggcggcg                           >  1:9651994/1‑94 (MQ=255)
                                                                  aGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGgcggcggcg                        >  1:388193/1‑94 (MQ=255)
                                                                  aGCGGCGTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGgccgcggcg                        >  1:5334703/1‑94 (MQ=255)
                                                                   gcggcgTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGgtggcggcgg                       >  2:6442647/1‑93 (MQ=255)
                                                                    cggcgTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTg                      >  1:4773291/1‑94 (MQ=255)
                                                                     ggcgTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGa                     <  1:512367/94‑1 (MQ=255)
                                                                     ggcgTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGa                     <  1:1024984/94‑1 (MQ=255)
                                                                     ggcgTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGGTAGTGAAAGCGTATGGGGGCGGCGTGa                     >  1:7525402/1‑94 (MQ=255)
                                                                      gcgTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGaa                    <  1:3556385/94‑1 (MQ=255)
                                                                        gTCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGAATc                  >  1:9092179/1‑94 (MQ=255)
                                                                         tCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGAATCa                 <  2:6125611/94‑1 (MQ=255)
                                                                         tCGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGAATCa                 >  1:1510347/1‑94 (MQ=255)
                                                                         gcGGGGAAATTACCGCCGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGAATCa                 <  1:7156691/93‑1 (MQ=255)
                                                                          cGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGAATCAg                <  2:3612100/94‑1 (MQ=255)
                                                                          cGGGGAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGAATCAg                <  1:4965671/94‑1 (MQ=255)
                                                                           ggggAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGAATCAgg               <  2:9502781/94‑1 (MQ=255)
                                                                           ggggAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGAATCAgg               >  1:4603260/1‑94 (MQ=255)
                                                                           ggggAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGGGAATCAgg               >  1:1352848/1‑94 (MQ=255)
                                                                           ggggAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGCCGTGAAGCAgg               >  1:3123914/1‑94 (MQ=255)
                                                                            gggAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGAATCAGgc              >  1:10354338/1‑94 (MQ=255)
                                                                             ggAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGAATCAGgcg             <  1:5452627/94‑1 (MQ=255)
                                                                             ggAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGAATCAGgcg             >  1:8278529/1‑94 (MQ=255)
                                                                              gAAATTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGAATCAGgcgc            >  1:10064163/1‑94 (MQ=255)
                                                                                aaTTACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGAATCAGGCGCTg          <  2:4591484/94‑1 (MQ=255)
                                                                                  ttACCGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGAATCAGGCGCTgcg        <  1:348148/94‑1 (MQ=255)
                                                                                     ccGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGAATCAGGCGCTGCGCCa     <  2:1251929/94‑1 (MQ=255)
                                                                                     ccGCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGAATCAGGCGCTGCGCCa     <  2:3300100/94‑1 (MQ=255)
                                                                                       gCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGAATCAGGCGCTGCGCCAGc   <  2:750598/94‑1 (MQ=255)
                                                                                       gCTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGAATCAGGCGCTGCGCCAGc   >  2:572346/1‑94 (MQ=255)
                                                                                        cTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGAATCAGGCGCTGCGCCAGCt  <  1:2351841/94‑1 (MQ=255)
                                                                                        cTGCGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGAATCAGGCGCTGCGCCAGCt  <  1:8588892/94‑1 (MQ=255)
                                                                                           |                                                                                          
GGTTTCTCTGACGACGGGGAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGTGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGAATCAGGCGCTGCGCCAGCT  >  NC_000913/4030283‑4030464

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 323 total aligned reads displayed.
ATCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCG‑CACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAACTTTACC  >  NC_000913/4031891‑4032077
                                                                                              |                                                                                             
ATCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCG‑C                                                                                               >  SRR4302545.3223807/1‑94 (MQ=60)
ATCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCG‑C                                                                                               <  SRR4302545.196591/94‑1 (MQ=60)
ATCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCG‑C                                                                                               >  SRR4302545.8357713/1‑94 (MQ=60)
 TCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCG‑CC                                                                                              >  SRR4302545.8438234/1‑94 (MQ=60)
  CGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCG‑Cca                                                                                             >  SRR4302545.7885922/1‑92 (MQ=60)
  CGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCG‑Cca                                                                                             >  SRR4302545.2096560/1‑92 (MQ=60)
   GCGCAGTGCCGGATCGTGTCCTCGAAGTCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCG‑Ccac                                                                                            <  SRR4302545.5089899/94‑4 (MQ=60)
   GCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCG‑Ccac                                                                                            >  SRR4302545.1521966/1‑91 (MQ=60)
   GCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCG‑Ccac                                                                                            >  SRR4302545.5054783/1‑91 (MQ=60)
    CGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATGTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACG                                                                                            <  SRR4302545.4513511/94‑1 (MQ=60)
    CGCACTGCCGGAACGTATCCTCGAAGCCGATTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTAGCGATTATCGCCACG                                                                                            >  SRR4302545.6300210/1‑94 (MQ=60)
     GCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGG                                                                                           >  SRR4302545.8667787/1‑94 (MQ=60)
     GCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGG                                                                                           <  SRR4302545.4360400/94‑1 (MQ=60)
     GCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGG                                                                                           >  SRR4302545.5821133/1‑94 (MQ=60)
      CACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGG                                                                                          >  SRR4302545.9500649/1‑94 (MQ=60)
       ACTGCCGGAACGTATTCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCG‑Ccacgggg                                                                                        >  SRR4302545.8623928/1‑87 (MQ=60)
       ACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGC                                                                                         <  SRR4302545.10195271/94‑1 (MQ=60)
       ACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGC                                                                                         >  SRR4302545.8810313/1‑94 (MQ=60)
        CTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCG                                                                                        <  SRR4302545.10106381/94‑1 (MQ=60)
         TGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGT                                                                                       <  SRR4302545.6325121/94‑1 (MQ=60)
          GCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTG                                                                                      <  SRR4302545.9867794/94‑1 (MQ=60)
           CCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGG                                                                                     <  SRR4302545.1992774/94‑1 (MQ=60)
           CCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGG                                                                                     >  SRR4302545.2560343/1‑94 (MQ=60)
            CGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGA                                                                                    >  SRR4302545.4862719/1‑94 (MQ=60)
            CGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTAAGTATGCTGGCGATTATCGCCACGGGCGTGGA                                                                                    >  SRR4302545.3768600/1‑94 (MQ=60)
             GGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGAT                                                                                   <  SRR4302545.2231689/94‑1 (MQ=60)
             GGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGAT                                                                                   >  SRR4302545.9751372/1‑94 (MQ=60)
             GGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGAT                                                                                   >  SRR4302545.1322349/1‑94 (MQ=60)
              GAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATG                                                                                  >  SRR4302545.4422104/1‑94 (MQ=60)
               AACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGA                                                                                 >  SRR4302545.4558887/1‑94 (MQ=60)
               AACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGA                                                                                 >  SRR4302545.2798857/1‑94 (MQ=60)
               AACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGA                                                                                 >  SRR4302545.1785655/1‑94 (MQ=60)
                ACGTATCCTCGAAGCCGTTTGTGGATTTTTCTCCGCCTATGCATTGGTGTTTTTTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGAC                                                                                <  SRR4302545.6203676/94‑1 (MQ=60)
                ACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGAC                                                                                >  SRR4302545.10511029/1‑94 (MQ=60)
                ACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGAC                                                                                <  SRR4302545.7377315/94‑1 (MQ=60)
                 CGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACT                                                                               <  SRR4302545.5611042/94‑1 (MQ=60)
                 CGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACT                                                                               >  SRR4302545.4244017/1‑94 (MQ=60)
                 CGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACT                                                                               >  SRR4302545.7181121/1‑94 (MQ=60)
                 CGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACT                                                                               <  SRR4302545.2502884/94‑1 (MQ=60)
                  GTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTT                                                                              >  SRR4302545.5387690/1‑94 (MQ=60)
                  GTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTT                                                                              >  SRR4302545.1259314/1‑94 (MQ=60)
                  GTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTT                                                                              >  SRR4302545.10932977/1‑94 (MQ=60)
                   TATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTT                                                                             >  SRR4302545.8212951/1‑94 (MQ=60)
                   TATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTT                                                                             >  SRR4302545.2494939/1‑94 (MQ=60)
                    ATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTT                                                                            <  SRR4302545.9968013/94‑1 (MQ=60)
                    ATCATCGACGCCGTTTGGGGATTTTTCTCCGCCTATGCCTTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTT                                                                            >  SRR4302545.6694108/1‑94 (MQ=60)
                     TCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTC                                                                           <  SRR4302545.1099360/94‑1 (MQ=60)
                     TCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTC                                                                           <  SRR4302545.679124/94‑1 (MQ=60)
                      CCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCT                                                                          <  SRR4302545.8044616/94‑1 (MQ=60)
                      CCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCT                                                                          >  SRR4302545.10886707/1‑94 (MQ=60)
                       CTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGCTTATCGCCACGGGCGTGGATGACTTTTCTG                                                                         <  SRR4302545.6707687/94‑1 (MQ=60)
                       CTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTG                                                                         <  SRR4302545.5421332/94‑1 (MQ=60)
                       CTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTG                                                                         >  SRR4302545.2919018/1‑94 (MQ=60)
                        TCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGC                                                                        <  SRR4302545.10594179/94‑1 (MQ=60)
                        TCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGC                                                                        >  SRR4302545.7497524/1‑94 (MQ=60)
                         CGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCC                                                                       >  SRR4302545.1613856/1‑94 (MQ=60)
                          GAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCT                                                                      <  SRR4302545.7382628/94‑1 (MQ=60)
                          GAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCT                                                                      >  SRR4302545.9601525/1‑94 (MQ=60)
                          GAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCT                                                                      >  SRR4302545.2986309/1‑94 (MQ=60)
                          GAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCT                                                                      <  SRR4302545.1111533/94‑1 (MQ=60)
                           AAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTT                                                                     >  SRR4302545.8391911/1‑94 (MQ=60)
                           AAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTT                                                                     <  SRR4302545.3967491/94‑1 (MQ=60)
                           AAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTT                                                                     <  SRR4302545.337896/94‑1 (MQ=60)
                            AGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTT                                                                    <  SRR4302545.10072626/94‑1 (MQ=60)
                            AGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTT                                                                    >  SRR4302545.1395296/1‑94 (MQ=60)
                            AGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTT                                                                    >  SRR4302545.5248335/1‑94 (MQ=60)
                            AGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTT                                                                    <  SRR4302545.960328/94‑1 (MQ=60)
                            AGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTT                                                                    <  SRR4302545.7939029/94‑1 (MQ=60)
                            AGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTT                                                                    >  SRR4302545.9592574/1‑94 (MQ=60)
                             GCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTG                                                                   <  SRR4302545.1229660/94‑1 (MQ=60)
                             GCCGTTTGGGGATTTTGCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTG                                                                   <  SRR4302545.3714629/94‑1 (MQ=60)
                              CCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGC                                                                  >  SRR4302545.345747/1‑94 (MQ=60)
                              CCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGC                                                                  <  SRR4302545.9013566/94‑1 (MQ=60)
                              CCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGC                                                                  <  SRR4302545.10240948/94‑1 (MQ=60)
                              CCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGC                                                                  <  SRR4302545.8166935/94‑1 (MQ=60)
                               CGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCG                                                                 >  SRR4302545.9871555/1‑94 (MQ=60)
                               CGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCG                                                                 >  SRR4302545.6790946/1‑94 (MQ=60)
                               CGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCG                                                                 <  SRR4302545.9251491/94‑1 (MQ=60)
                                GGTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTAAGTATGCTGGCGATTATCG‑CAaccgacgcggatggctgttgtgcccttgagt                                                               >  SRR4302545.2369125/1‑63 (MQ=60)
                                  TTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCG                                                              <  SRR4302545.10214000/94‑1 (MQ=60)
                                  TTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCG                                                              <  SRR4302545.6892589/94‑1 (MQ=60)
                                  TTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCG                                                              >  SRR4302545.9570375/1‑94 (MQ=60)
                                    GGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGT                                                            >  SRR4302545.3197778/1‑94 (MQ=60)
                                     GGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTT                                                           <  SRR4302545.2411224/94‑1 (MQ=60)
                                     GGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTT                                                           <  SRR4302545.278025/94‑1 (MQ=60)
                                      GGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTG                                                          <  SRR4302545.8050596/94‑1 (MQ=60)
                                       GATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGT                                                         <  SRR4302545.157088/94‑1 (MQ=60)
                                       GATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGT                                                         <  SRR4302545.156777/94‑1 (MQ=60)
                                        ATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTTCGTCGGTTGTT                                                        <  SRR4302545.5535581/94‑1 (MQ=60)
                                        ATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTT                                                        >  SRR4302545.6539321/1‑94 (MQ=60)
                                        ATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTT                                                        <  SRR4302545.3440063/94‑1 (MQ=60)
                                        ATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTT                                                        >  SRR4302545.2995921/1‑94 (MQ=60)
                                        ATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTT                                                        <  SRR4302545.9206523/94‑1 (MQ=60)
                                        ATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTT                                                        <  SRR4302545.9206522/94‑1 (MQ=60)
                                         TTTTTCTCCGACTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTG                                                       <  SRR4302545.5585908/94‑1 (MQ=60)
                                          TTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGC                                                      >  SRR4302545.1719025/1‑94 (MQ=60)
                                          TTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGC                                                      <  SRR4302545.7157715/94‑1 (MQ=60)
                                           TTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCG                                                     <  SRR4302545.9229168/94‑1 (MQ=60)
                                           TTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCG                                                     <  SRR4302545.4059909/94‑1 (MQ=60)
                                              CTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACA                                                  >  SRR4302545.4101694/1‑94 (MQ=60)
                                              CTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACA                                                  <  SRR4302545.8350235/94‑1 (MQ=60)
                                              CTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACA                                                  >  SRR4302545.5341422/1‑94 (MQ=60)
                                               TCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACAT                                                 <  SRR4302545.2565330/94‑1 (MQ=60)
                                               TCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACAT                                                 <  SRR4302545.3943126/94‑1 (MQ=60)
                                               TCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACAT                                                 >  SRR4302545.7470357/1‑94 (MQ=60)
                                                CCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATT                                                >  SRR4302545.1196482/1‑94 (MQ=60)
                                                CCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATT                                                <  SRR4302545.696080/94‑1 (MQ=60)
                                                 CGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTG                                               <  SRR4302545.5699428/94‑1 (MQ=60)
                                                  GCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGA                                              >  SRR4302545.7619626/1‑94 (MQ=60)
                                                  GCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGA                                              >  SRR4302545.6214006/1‑94 (MQ=60)
                                                   CCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAA                                             <  SRR4302545.2462660/94‑1 (MQ=60)
                                                    CTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAAT                                            >  SRR4302545.10040994/1‑94 (MQ=60)
                                                     TATGCATTGGTGTTTATTGTCAGTATGCTGGCGGTTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATA                                           >  SRR4302545.9053960/1‑94 (MQ=60)
                                                     TATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATA                                           <  SRR4302545.10030023/94‑1 (MQ=60)
                                                       TGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAAC                                         >  SRR4302545.4183186/1‑94 (MQ=60)
                                                        GCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACC                                        <  SRR4302545.7783984/94‑1 (MQ=60)
                                                        GCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACC                                        <  SRR4302545.5046145/94‑1 (MQ=60)
                                                        GCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACC                                        <  SRR4302545.6393012/94‑1 (MQ=60)
                                                        GCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACC                                        <  SRR4302545.6393013/94‑1 (MQ=60)
                                                         CATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGGTGCGACATTGAATAACCT                                       >  SRR4302545.3541987/1‑94 (MQ=60)
                                                          ATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTG                                      <  SRR4302545.4329284/94‑1 (MQ=60)
                                                          ATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTG                                      >  SRR4302545.10657654/1‑94 (MQ=60)
                                                          ATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACGTTTCTGCCTTTGCGTCGGTTGTTGCGACAGTGAATAACCTG                                      >  SRR4302545.9656605/1‑94 (MQ=60)
                                                           TTTGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGG                                     <  SRR4302545.5431256/94‑1 (MQ=60)
                                                           TTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGG                                     <  SRR4302545.6621416/94‑1 (MQ=60)
                                                           ATGGTGTTTATTGTCCGAAAGCTGGCGATTATCGCCACGGGCGAGGAAAACTTTTCTGCCTTTGCGTCGGTTGTTACGACATTGAATAACCTGG                                     <  SRR4302545.9656961/94‑1 (MQ=55)
                                                            TGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGG                                    >  SRR4302545.7033249/1‑94 (MQ=60)
                                                            TGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGG                                    <  SRR4302545.1828934/94‑1 (MQ=60)
                                                             GGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGG                                   >  SRR4302545.44537/1‑94 (MQ=60)
                                                             GGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGG                                   >  SRR4302545.6113594/1‑94 (MQ=60)
                                                              GTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGC                                  >  SRR4302545.5341910/1‑94 (MQ=60)
                                                               TGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGGATAACCTGGGGCC                                 >  SRR4302545.3863486/1‑94 (MQ=60)
                                                               TGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCC                                 >  SRR4302545.3863173/1‑94 (MQ=60)
                                                                GTTTATTGTCAGTATGCTGGCTATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCA                                <  SRR4302545.8873366/94‑1 (MQ=60)
                                                                GTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCA                                <  SRR4302545.956309/94‑1 (MQ=60)
                                                                 TTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAG                               <  SRR4302545.10666247/94‑1 (MQ=60)
                                                                 TTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAG                               >  SRR4302545.2727172/1‑94 (MQ=60)
                                                                 TTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAG                               >  SRR4302545.1694993/1‑94 (MQ=60)
                                                                   TATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGG                             <  SRR4302545.16626/94‑1 (MQ=60)
                                                                   TATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGG                             <  SRR4302545.7997163/94‑1 (MQ=60)
                                                                    ATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGC                            >  SRR4302545.4959439/1‑94 (MQ=60)
                                                                    ATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGC                            >  SRR4302545.5318086/1‑94 (MQ=60)
                                                                    ATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCCTTGCGTCGGTTGTTGCGACATTGAATAAGCTGGCGCCAGGGC                            >  SRR4302545.8670934/1‑94 (MQ=60)
                                                                     TTGTCAGTATGCTGGCGATTATCGCCACGGGCGTTGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAGCCTGGGGCCAGGGCT                           <  SRR4302545.3583071/94‑1 (MQ=60)
                                                                     TTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCT                           >  SRR4302545.3392025/1‑94 (MQ=60)
                                                                     TTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCT                           <  SRR4302545.10083417/94‑1 (MQ=60)
                                                                      tgtacGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTATGCCCTTACGTCGGTTGTTGAGACATTGAATAACCTGGGGCCAGGGCTT                          >  SRR4302545.8902018/6‑94 (MQ=60)
                                                                      TGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTT                          >  SRR4302545.3129008/1‑94 (MQ=60)
                                                                       GTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTG                         <  SRR4302545.3041926/94‑1 (MQ=60)
                                                                       GTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTG                         <  SRR4302545.3896155/94‑1 (MQ=60)
                                                                        TCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGG                        >  SRR4302545.4914145/1‑94 (MQ=60)
                                                                        TCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGG                        >  SRR4302545.7397182/1‑94 (MQ=60)
                                                                         CAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGC                       >  SRR4302545.10384677/1‑94 (MQ=60)
                                                                         CAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGC                       <  SRR4302545.3275105/94‑1 (MQ=60)
                                                                         CAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGC                       <  SRR4302545.1427710/94‑1 (MQ=60)
                                                                         CAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGC                       >  SRR4302545.10727600/1‑94 (MQ=60)
                                                                          AGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCG                      >  SRR4302545.4067701/1‑94 (MQ=60)
                                                                          AGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCG                      <  SRR4302545.872669/94‑1 (MQ=60)
                                                                           GTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGT                     >  SRR4302545.8849217/1‑94 (MQ=60)
                                                                           GTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGT                     >  SRR4302545.5597692/1‑94 (MQ=60)
                                                                           GTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGT                     <  SRR4302545.10336629/94‑1 (MQ=60)
                                                                            TATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAAGCTGGGGCCGGGGCGTGGCGTG                    >  SRR4302545.1633072/1‑94 (MQ=60)
                                                                              TGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGT                  <  SRR4302545.6434289/94‑1 (MQ=60)
                                                                               GCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTT                 >  SRR4302545.6831673/1‑94 (MQ=60)
                                                                                CTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTTCGACGTTGAATAACCTTGGGTCGGGGCTTGGCGGGGTTG                >  SRR4302545.8731864/1‑94 (MQ=60)
                                                                                CTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTG                >  SRR4302545.10123882/1‑94 (MQ=60)
                                                                                 TGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGC               >  SRR4302545.7188331/1‑94 (MQ=60)
                                                                                 TGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGC               >  SRR4302545.6438543/1‑94 (MQ=60)
                                                                                  GGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCT              <  SRR4302545.10641611/94‑1 (MQ=60)
                                                                                  GGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCT              <  SRR4302545.6758728/94‑1 (MQ=60)
                                                                                  GGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCT              <  SRR4302545.10160423/94‑1 (MQ=60)
                                                                                   GCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTG             <  SRR4302545.6169625/94‑1 (MQ=60)
                                                                                    CGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGA            >  SRR4302545.4846799/1‑94 (MQ=60)
                                                                                    CGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGA            >  SRR4302545.655874/1‑94 (MQ=60)
                                                                                     GATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGAT           <  SRR4302545.10419648/94‑1 (MQ=60)
                                                                                     GATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGAT           >  SRR4302545.8396311/1‑94 (MQ=60)
                                                                                     GATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGAT           >  SRR4302545.8099541/1‑94 (MQ=60)
                                                                                     GATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGAT           <  SRR4302545.7919854/94‑1 (MQ=60)
                                                                                     GATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGAT           <  SRR4302545.7746335/94‑1 (MQ=60)
                                                                                     GATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGAT           <  SRR4302545.6479295/94‑1 (MQ=60)
                                                                                      ATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATA          >  SRR4302545.770930/1‑94 (MQ=60)
                                                                                      ATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATA          >  SRR4302545.7590502/1‑94 (MQ=60)
                                                                                      ATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATA          >  SRR4302545.3066158/1‑94 (MQ=60)
                                                                                       TTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAA         <  SRR4302545.3319164/94‑1 (MQ=60)
                                                                                         ATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAACT       <  SRR4302545.4114642/94‑1 (MQ=60)
                                                                                           cgcCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTTCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAACTTT     >  SRR4302545.9066323/4‑94 (MQ=60)
                                                                                           cgcCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAACTTT     >  SRR4302545.2411929/4‑94 (MQ=60)
                                                                                           cgcCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAACTTT     >  SRR4302545.780977/4‑94 (MQ=60)
                                                                                           cgcCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAACTTT     <  SRR4302545.6050945/91‑1 (MQ=60)
                                                                                           cgcCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAACTTT     >  SRR4302545.4918713/4‑94 (MQ=60)
                                                                                           cgcCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTAGCGTGGTTGCTGATAACTTT     >  SRR4302545.8807133/4‑94 (MQ=60)
                                                                                           cgcCACGGGCGTGGATGACTTGTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAACTTT     <  SRR4302545.6050946/91‑1 (MQ=60)
                                                                                           cgaCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAACTTT     >  SRR4302545.7570075/4‑94 (MQ=60)
                                                                                            gtCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAACTTTA    <  SRR4302545.5591354/92‑1 (MQ=60)
                                                                                            gcCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAACTTTA    <  SRR4302545.3097017/92‑1 (MQ=60)
                                                                                            gcCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAACTTTA    >  SRR4302545.4779888/3‑94 (MQ=60)
                                                                                            gcCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAACTTTA    <  SRR4302545.2325326/92‑1 (MQ=60)
                                                                                            C‑CACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAACTTTAC   >  SRR4302545.6842272/1‑94 (MQ=60)
                                                                                            C‑CACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAACTTTAC   >  SRR4302545.1451188/1‑94 (MQ=60)
                                                                                              CACGGGCGTGGATGACTTTTCCGCCTTTGCGTCCGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAACTTTACC  <  SRR4302545.5623174/94‑1 (MQ=60)
                                                                                              |                                                                                             
ATCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCG‑CACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAACTTTACC  >  NC_000913/4031891‑4032077

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑