Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,477,041 Δ1 bp intergenic (‑151/‑269) b4256 ← / → yjgN hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,477,0410G.100.0% 2119.3 / NA 460intergenic (‑151/‑269)b4256/yjgNhypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base . (180/280);  total (180/280)

Only 100 of 472 total aligned reads displayed.

CAGCTCGTCAAGATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCGAGGATTATCCTGCAGCGTCAGGCGACG‑ATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATAC  >  NC_000913/4476948‑4477132
                                                                                             |                                                                                            
    tCGTCAAGATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGAt                                                                                         >  1:10025892/1‑94 (MQ=255)
      gTCAAGATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTa                                                                                       >  2:8375218/1‑94 (MQ=255)
      gTCAAGATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTa                                                                                       >  2:7946346/1‑94 (MQ=255)
       tCAAGATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTAt                                                                                      <  2:4462241/94‑1 (MQ=255)
        cAAGATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATc                                                                                     >  2:3635636/1‑94 (MQ=255)
        cAAGATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATc                                                                                     <  2:1464833/94‑1 (MQ=255)
         aaGATTCGGATCGGCTACGGTGTATCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATcc                                                                                    <  2:3350016/94‑1 (MQ=255)
          agagTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGCAAGACCGTATTCGGCGGATCCCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCt                                                                                   <  2:6071140/94‑1 (MQ=255)
           gATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTg                                                                                  >  1:5777201/1‑94 (MQ=255)
           gATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTg                                                                                  >  1:5259721/1‑94 (MQ=255)
           gATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTg                                                                                  >  1:2720440/1‑94 (MQ=255)
           gATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTg                                                                                  <  1:1164617/94‑1 (MQ=255)
            aTTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGc                                                                                 <  1:8804723/94‑1 (MQ=255)
                ggATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCg                                                                             >  2:938826/1‑94 (MQ=255)
                ggATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCg                                                                             <  2:7536805/94‑1 (MQ=255)
                ggATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCg                                                                             >  1:1842243/1‑94 (MQ=255)
                 gATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGt                                                                            >  2:3730275/1‑94 (MQ=255)
                  aTCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTc                                                                           >  1:510840/1‑94 (MQ=255)
                   tCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCa                                                                          <  1:7433972/94‑1 (MQ=255)
                    cGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAg                                                                         <  1:6985426/94‑1 (MQ=255)
                     ggCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAgg                                                                        <  2:3942050/94‑1 (MQ=255)
                       cGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGcg                                                                      <  1:6065425/94‑1 (MQ=255)
                         aCGGTGTATCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATTACGCGGGCGATAGC‑AGGATTATCCTGCAGCGGCAGGcgac                                                                    <  1:3284298/94‑1 (MQ=255)
                           ggTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGcgacgc                                                                  >  1:343518/1‑93 (MQ=255)
                              gtAGCCTTTATCAGCGGTAAGCCCGTATTCGGCGCATCCCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGcgacgcatt                                                               <  1:4584716/94‑5 (MQ=255)
                              gtAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGcgacgcatt                                                               >  2:1872705/1‑90 (MQ=255)
                                aGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTAc                                                             <  2:7256775/94‑1 (MQ=255)
                                aGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTAc                                                             <  1:5365402/94‑1 (MQ=255)
                                 gCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACa                                                            >  1:9853794/1‑94 (MQ=255)
                                   cTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAgg                                                          <  2:4912308/94‑1 (MQ=255)
                                     ttATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTg                                                        <  1:8095483/94‑1 (MQ=255)
                                      tATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGa                                                       >  1:8401198/1‑94 (MQ=255)
                                       aTCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGAt                                                      >  1:7235529/1‑94 (MQ=255)
                                         cAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTg                                                    <  2:1571919/94‑1 (MQ=255)
                                          aGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTgc                                                   >  2:2277378/1‑94 (MQ=255)
                                          aGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTgc                                                   <  2:10130213/94‑1 (MQ=255)
                                          aGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTgc                                                   <  2:8165046/94‑1 (MQ=255)
                                           gCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTgcg                                                  <  2:5983658/94‑1 (MQ=255)
                                           gCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTgcg                                                  <  2:4101773/94‑1 (MQ=255)
                                           gCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTgcg                                                  <  2:7167334/94‑1 (MQ=255)
                                            cGGTAAGACCGTATTCGGCGGATGCCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTgcgg                                                 >  1:67549/1‑94 (MQ=255)
                                             ggTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTgcggc                                                <  2:6529784/94‑1 (MQ=255)
                                             ggTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTgcggc                                                <  1:1700600/94‑1 (MQ=255)
                                             ggTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTgcggc                                                <  1:4246091/94‑1 (MQ=255)
                                              gTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTgcggcg                                               <  2:864445/94‑1 (MQ=255)
                                              gTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTgcggcg                                               <  2:4853636/94‑1 (MQ=255)
                                                aaGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCa                                             >  1:9333374/1‑94 (MQ=255)
                                                aaGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCa                                             <  2:9442724/94‑1 (MQ=255)
                                                aaGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCa                                             >  2:4585282/1‑94 (MQ=255)
                                                 aGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCaa                                            >  1:8203739/1‑94 (MQ=255)
                                                 aGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCaa                                            >  1:3860128/1‑94 (MQ=255)
                                                  gACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAAt                                           <  1:4341564/94‑1 (MQ=255)
                                                   actgTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATg                                          >  1:9347502/4‑94 (MQ=255)
                                                   aCCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTAGCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATg                                          <  2:5637177/94‑1 (MQ=255)
                                                    ccGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGt                                         <  2:8302423/94‑1 (MQ=255)
                                                    ccGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGt                                         <  1:9643690/94‑1 (MQ=255)
                                                       tATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTAt                                      <  1:767881/94‑1 (MQ=255)
                                                       tATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTAt                                      <  2:6824250/94‑1 (MQ=255)
                                                        aTTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTAtt                                     <  1:2306987/94‑1 (MQ=255)
                                                         ttCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTc                                    <  1:3949145/94‑1 (MQ=255)
                                                         ttCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTc                                    <  1:9754483/94‑1 (MQ=255)
                                                         ttCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTc                                    >  2:9125871/1‑94 (MQ=255)
                                                          tCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCa                                   <  1:3490997/94‑1 (MQ=255)
                                                          tCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCa                                   <  2:7381123/94‑1 (MQ=255)
                                                           cggcggATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCAt                                  <  1:7477433/94‑1 (MQ=255)
                                                           cggcggATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCAt                                  <  2:9611019/94‑1 (MQ=255)
                                                             gcggATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAg                                <  1:2173524/94‑1 (MQ=255)
                                                             gcggATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCATCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAg                                <  1:5578239/94‑1 (MQ=255)
                                                              cggATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGt                               >  1:3024713/1‑94 (MQ=255)
                                                              cggATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGt                               >  1:1461596/1‑94 (MQ=255)
                                                               ggATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGtt                              <  2:5123311/94‑1 (MQ=255)
                                                                 aTACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTa                            <  2:594/94‑1 (MQ=255)
                                                                  tACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTaa                           >  1:8059082/1‑94 (MQ=255)
                                                                  tACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTaa                           <  1:863150/94‑1 (MQ=255)
                                                                  tACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTaa                           >  1:1569590/1‑94 (MQ=255)
                                                                  tACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTaa                           >  1:4997149/1‑94 (MQ=255)
                                                                    ccTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAAcc                         >  2:5567722/1‑94 (MQ=255)
                                                                    ccTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCAGTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAAcc                         <  2:7863312/94‑1 (MQ=255)
                                                                     cTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAAccc                        >  2:5761792/1‑94 (MQ=255)
                                                                        aCGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaat                     >  2:9747824/1‑94 (MQ=255)
                                                                        aCGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaat                     >  1:8944521/1‑94 (MQ=255)
                                                                         cGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaata                    <  2:2992426/94‑1 (MQ=255)
                                                                         cGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaata                    <  2:1147561/94‑1 (MQ=255)
                                                                         cGAATGACGCGGGCGATAGC‑AGGATGAACCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaata                    <  1:6551458/94‑1 (MQ=255)
                                                                          gAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataa                   >  1:9261890/1‑94 (MQ=255)
                                                                          gAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataa                   >  1:6269792/1‑94 (MQ=255)
                                                                           aaTGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaa                  <  2:2675679/94‑1 (MQ=255)
                                                                            aTGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaa                 >  1:4837939/1‑94 (MQ=255)
                                                                             tGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaaa                >  2:5355026/1‑94 (MQ=255)
                                                                             tGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaaa                <  2:245905/94‑1 (MQ=255)
                                                                             tGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaaa                <  2:10383454/94‑1 (MQ=255)
                                                                              gACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaaat               <  1:3561002/94‑1 (MQ=255)
                                                                              gACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaaat               <  1:3771005/94‑1 (MQ=255)
                                                                              gACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaaat               <  2:1951861/94‑1 (MQ=255)
                                                                                cgcgGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaaataa             <  1:7845248/94‑1 (MQ=255)
                                                                                 gcgGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaaataaa            >  1:10380220/1‑94 (MQ=255)
                                                                                  cgGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAg           <  1:3165081/94‑1 (MQ=255)
                                                                                   gggCGAGAGC‑AGGATTATCCTGCAGCTTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGt          <  2:4377311/94‑1 (MQ=255)
                                                                                     gCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTaa        <  2:6986312/94‑1 (MQ=255)
                                                                                      cGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAAt       <  2:6251235/94‑1 (MQ=255)
                                                                                             |                                                                                            
CAGCTCGTCAAGATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCGAGGATTATCCTGCAGCGTCAGGCGACG‑ATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATAC  >  NC_000913/4476948‑4477132

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 250 total aligned reads displayed.
GGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCGAGGATTATCCTGCAGCGTCAGGCG‑‑ACG‑ATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGT  >  NC_000913/4476975‑4477161
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GGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACG‑C                                                                                              >  SRR4302545.350873/1‑94 (MQ=60)
GGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACG‑C                                                                                              <  SRR4302545.7405511/94‑1 (MQ=60)
 GTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGca                                                                                              >  SRR4302545.5241497/1‑92 (MQ=60)
  TGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGcat                                                                                             >  SRR4302545.10413027/1‑91 (MQ=60)
   GTAGCCTTTATCAGCGGTAAGCCCGTATTCGGCGCATCCCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATT                                                                                            <  SRR4302545.4702163/94‑1 (MQ=60)
   GTAGCCTGTATCAACGGTAAGACCGTATTCGGCGGATACCTGACGAATGACTCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATT                                                                                            <  SRR4302545.3918801/94‑1 (MQ=60)
    TAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTA                                                                                           >  SRR4302545.7982488/1‑94 (MQ=60)
    TAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTA                                                                                           <  SRR4302545.7968191/94‑1 (MQ=60)
    TAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTA                                                                                           >  SRR4302545.6885139/1‑94 (MQ=60)
    TAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTA                                                                                           <  SRR4302545.10075962/94‑1 (MQ=60)
      GCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACA                                                                                         >  SRR4302545.6421168/1‑94 (MQ=60)
      GCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACA                                                                                         >  SRR4302545.10146651/1‑94 (MQ=60)
      GCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACA                                                                                         >  SRR4302545.10146650/1‑94 (MQ=60)
      GCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACA                                                                                         <  SRR4302545.3859683/94‑1 (MQ=60)
       CCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAG                                                                                        <  SRR4302545.7415254/94‑1 (MQ=60)
       CCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAG                                                                                        >  SRR4302545.3122733/1‑94 (MQ=60)
        CTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGG                                                                                       >  SRR4302545.5464687/1‑94 (MQ=60)
        CTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGG                                                                                       >  SRR4302545.5464689/1‑94 (MQ=60)
        CTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGG                                                                                       >  SRR4302545.3284240/1‑94 (MQ=60)
         TTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGT                                                                                      <  SRR4302545.3413267/94‑1 (MQ=60)
         TTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGT                                                                                      <  SRR4302545.3529600/94‑1 (MQ=60)
          TTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTG                                                                                     <  SRR4302545.3361142/94‑1 (MQ=60)
          TTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTG                                                                                     <  SRR4302545.8328873/94‑1 (MQ=60)
          TTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTG                                                                                     <  SRR4302545.8328874/94‑1 (MQ=60)
           TATCAGCGGTAAGACCGTATTCGTCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGA                                                                                    <  SRR4302545.7772811/94‑1 (MQ=60)
           TATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGA                                                                                    >  SRR4302545.8644316/1‑94 (MQ=60)
            ATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGAT                                                                                   >  SRR4302545.388809/1‑94 (MQ=60)
            ATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGAT                                                                                   <  SRR4302545.4400500/94‑1 (MQ=60)
             TCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGGGATT                                                                                  >  SRR4302545.3891924/1‑94 (MQ=60)
              CAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTG                                                                                 >  SRR4302545.9517446/1‑94 (MQ=60)
              CAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTG                                                                                 >  SRR4302545.8807012/1‑94 (MQ=60)
               AGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGG                                                                                >  SRR4302545.4576111/1‑94 (MQ=60)
               AGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGC                                                                                >  SRR4302545.7650815/1‑94 (MQ=60)
                GCGGTAAGACCGTATTCGGCTGATACCTGACGAATGAGGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCATGCG‑‑ACGCATTACGGTTGATTGCG                                                                               <  SRR4302545.968785/94‑1 (MQ=60)
                GCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCG                                                                               <  SRR4302545.1737748/94‑1 (MQ=60)
                GCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCG                                                                               <  SRR4302545.6140941/94‑1 (MQ=60)
                GCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCG                                                                               <  SRR4302545.8794445/94‑1 (MQ=60)
                GCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCG                                                                               <  SRR4302545.4419223/94‑1 (MQ=60)
                GCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCG                                                                               <  SRR4302545.9184019/94‑1 (MQ=60)
                CCGGTAATACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCG                                                                               <  SRR4302545.4007765/94‑1 (MQ=60)
                 CGGTAAGACCGTATTCGGCGGATGCCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGG                                                                              >  SRR4302545.69054/1‑94 (MQ=60)
                 CGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGG                                                                              <  SRR4302545.5373564/94‑1 (MQ=60)
                 CGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGG                                                                              <  SRR4302545.10082937/94‑1 (MQ=60)
                  GGTACGACCGTATTCGGCAGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGC                                                                             <  SRR4302545.9539274/94‑1 (MQ=60)
                  GGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGC                                                                             <  SRR4302545.1741045/94‑1 (MQ=60)
                  GGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGC                                                                             <  SRR4302545.9539273/94‑1 (MQ=60)
                  GGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGC                                                                             <  SRR4302545.9820847/94‑1 (MQ=60)
                  GGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGC                                                                             <  SRR4302545.4352420/94‑1 (MQ=60)
                  GGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGC                                                                             <  SRR4302545.9539272/94‑1 (MQ=60)
                   GTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCG                                                                            >  SRR4302545.3605775/1‑94 (MQ=60)
                   GTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCG                                                                            >  SRR4302545.7943495/1‑94 (MQ=60)
                    TAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGC                                                                           >  SRR4302545.7848048/1‑94 (MQ=60)
                    TAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGC                                                                           <  SRR4302545.1044902/94‑1 (MQ=60)
                     AAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCA                                                                          >  SRR4302545.9607025/1‑94 (MQ=60)
                      AGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑ATGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAA                                                                         >  SRR4302545.2690532/1‑94 (MQ=60)
                      AGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAA                                                                         >  SRR4302545.3956479/1‑94 (MQ=60)
                       GACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAAT                                                                        <  SRR4302545.4451141/94‑1 (MQ=60)
                       GACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAAT                                                                        <  SRR4302545.10742733/94‑1 (MQ=60)
                       GACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAAT                                                                        <  SRR4302545.2332144/94‑1 (MQ=60)
                       GACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAAT                                                                        >  SRR4302545.2187868/1‑94 (MQ=60)
                        ACTGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATG                                                                       >  SRR4302545.9621646/1‑94 (MQ=60)
                        ACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATG                                                                       <  SRR4302545.7830316/94‑1 (MQ=60)
                        ACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATG                                                                       <  SRR4302545.10250173/94‑1 (MQ=60)
                         CCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGT                                                                      <  SRR4302545.9928334/94‑1 (MQ=60)
                          CGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTT                                                                     <  SRR4302545.6699101/94‑1 (MQ=60)
                           GTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTA                                                                    <  SRR4302545.3609704/94‑1 (MQ=60)
                           GTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTA                                                                    >  SRR4302545.1708064/1‑94 (MQ=60)
                             ATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATT                                                                  <  SRR4302545.2363175/94‑1 (MQ=60)
                              TTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTC                                                                 <  SRR4302545.10044709/94‑1 (MQ=60)
                              TTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTC                                                                 <  SRR4302545.4047815/94‑1 (MQ=60)
                              TTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTC                                                                 <  SRR4302545.143322/94‑1 (MQ=60)
                               TCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCA                                                                <  SRR4302545.3576581/94‑1 (MQ=60)
                               TCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCA                                                                >  SRR4302545.7899222/1‑94 (MQ=60)
                               TCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCA                                                                <  SRR4302545.8620595/94‑1 (MQ=60)
                                CGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCAT                                                               <  SRR4302545.7689085/94‑1 (MQ=60)
                                CGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCAT                                                               <  SRR4302545.5250863/94‑1 (MQ=60)
                                 GGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATA                                                              >  SRR4302545.10073779/1‑94 (MQ=60)
                                  GCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAG                                                             <  SRR4302545.2226655/94‑1 (MQ=60)
                                  GCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAG                                                             <  SRR4302545.8334923/94‑1 (MQ=60)
                                  GCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAG                                                             <  SRR4302545.6359163/94‑1 (MQ=60)
                                   CGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGT                                                            <  SRR4302545.5601359/94‑1 (MQ=60)
                                   CGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGT                                                            >  SRR4302545.7638257/1‑94 (MQ=60)
                                   CGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGT                                                            >  SRR4302545.1495039/1‑94 (MQ=60)
                                   CGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGT                                                            >  SRR4302545.3098709/1‑94 (MQ=60)
                                   CGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGT                                                            <  SRR4302545.7997885/94‑1 (MQ=60)
                                    gtatcgCTGACGAATGACGCGGGCGATAGC‑AGCATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGCCGCAATGTTATTCATAGTT                                                           <  SRR4302545.5138560/88‑1 (MQ=60)
                                    GGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTT                                                           <  SRR4302545.4490322/94‑1 (MQ=60)
                                    GGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTT                                                           >  SRR4302545.4972732/1‑94 (MQ=60)
                                    CGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTAGCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTT                                                           <  SRR4302545.2818441/94‑1 (MQ=60)
                                     GATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTT                                                          <  SRR4302545.5667163/94‑1 (MQ=60)
                                     GATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTT                                                          <  SRR4302545.3500430/94‑1 (MQ=60)
                                      ATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAAAC‑‑ATTAAAGGTGATTGCGGCGCAATGTTATTCgtaatttg                                                         <  SRR4302545.2808295/94‑9 (MQ=60)
                                      ATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTA                                                         <  SRR4302545.4261848/94‑1 (MQ=60)
                                      ATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTA                                                         <  SRR4302545.383529/94‑1 (MQ=60)
                                       TACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAA                                                        >  SRR4302545.1606572/1‑94 (MQ=60)
                                       TACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAA                                                        <  SRR4302545.882504/94‑1 (MQ=60)
                                       TACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAA                                                        >  SRR4302545.8983891/1‑94 (MQ=60)
                                       TACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAA                                                        >  SRR4302545.5123713/1‑94 (MQ=60)
                                       TACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAA                                                        >  SRR4302545.5123711/1‑94 (MQ=60)
                                       TACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAA                                                        >  SRR4302545.8289514/1‑94 (MQ=60)
                                        ACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAAC                                                       <  SRR4302545.6675019/94‑1 (MQ=60)
                                        ACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAAC                                                       <  SRR4302545.7476198/94‑1 (MQ=60)
                                         CCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACC                                                      <  SRR4302545.8368918/94‑1 (MQ=60)
                                         CCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACC                                                      <  SRR4302545.4714688/94‑1 (MQ=60)
                                         CCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACC                                                      >  SRR4302545.5344198/1‑94 (MQ=60)
                                         CCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACC                                                      <  SRR4302545.3312718/94‑1 (MQ=60)
                                           TGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCTCAATTTTATTCATAGTTTAACCCA                                                    <  SRR4302545.5203966/94‑1 (MQ=60)
                                            GACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAA                                                   >  SRR4302545.8027400/1‑94 (MQ=60)
                                             ACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAAT                                                  >  SRR4302545.9204691/1‑94 (MQ=60)
                                             ACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAAT                                                  >  SRR4302545.4308897/1‑94 (MQ=60)
                                             ACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAAT                                                  >  SRR4302545.7595436/1‑94 (MQ=60)
                                              CGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATA                                                 <  SRR4302545.5496007/94‑1 (MQ=60)
                                              CGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATA                                                 <  SRR4302545.7572183/94‑1 (MQ=60)
                                              CGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATA                                                 <  SRR4302545.2668670/94‑1 (MQ=60)
                                              CGAATGACGCGGGCGATAGC‑AGGATGAACCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATA                                                 <  SRR4302545.6730686/94‑1 (MQ=60)
                                               GAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAA                                                >  SRR4302545.4647130/1‑94 (MQ=60)
                                               GAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAA                                                >  SRR4302545.6440736/1‑94 (MQ=60)
                                               GAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAA                                                >  SRR4302545.6124239/1‑94 (MQ=60)
                                               GAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAA                                                <  SRR4302545.8493080/94‑1 (MQ=60)
                                               GAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAA                                                >  SRR4302545.9033442/1‑94 (MQ=60)
                                               GAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAA                                                >  SRR4302545.9533420/1‑94 (MQ=60)
                                               GAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAA                                                <  SRR4302545.995128/94‑1 (MQ=60)
                                                AATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAA                                               <  SRR4302545.7780813/94‑1 (MQ=60)
                                                AATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAA                                               <  SRR4302545.6909264/94‑1 (MQ=60)
                                                AATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAA                                               <  SRR4302545.5055075/94‑1 (MQ=60)
                                                 ATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAA                                              >  SRR4302545.4961321/1‑94 (MQ=60)
                                                 ATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAA                                              <  SRR4302545.7066011/94‑1 (MQ=60)
                                                 ATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGACGCAATGTTATTCATAGTTTAACCCAATAAAA                                              <  SRR4302545.853959/94‑1 (MQ=60)
                                                   GACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAAT                                            <  SRR4302545.5909680/94‑1 (MQ=60)
                                                   GACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAAT                                            <  SRR4302545.8281359/94‑1 (MQ=60)
                                                   GACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAAT                                            <  SRR4302545.5909679/94‑1 (MQ=60)
                                                   GACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAAT                                            <  SRR4302545.3648044/94‑1 (MQ=60)
                                                   GACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAAT                                            <  SRR4302545.7648931/94‑1 (MQ=60)
                                                   GACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAAT                                            >  SRR4302545.1524671/1‑94 (MQ=60)
                                                   GACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAAT                                            >  SRR4302545.1596560/1‑94 (MQ=60)
                                                    ACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATA                                           <  SRR4302545.8308651/94‑1 (MQ=60)
                                                    ACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATA                                           <  SRR4302545.8308655/94‑1 (MQ=60)
                                                    ACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATA                                           <  SRR4302545.2253519/94‑1 (MQ=60)
                                                    ACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATA                                           <  SRR4302545.4034315/94‑1 (MQ=60)
                                                     CGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAA                                          <  SRR4302545.8067698/94‑1 (MQ=60)
                                                     CGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAA                                          >  SRR4302545.1351943/1‑94 (MQ=60)
                                                     CGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAA                                          <  SRR4302545.9610172/94‑1 (MQ=60)
                                                     CGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAA                                          <  SRR4302545.9610173/94‑1 (MQ=60)
                                                      GCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAA                                         >  SRR4302545.10686280/1‑94 (MQ=60)
                                                       CGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAG                                        <  SRR4302545.5804416/94‑1 (MQ=60)
                                                       CGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAG                                        >  SRR4302545.9103686/1‑94 (MQ=60)
                                                       CGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAG                                        <  SRR4302545.3242837/94‑1 (MQ=60)
                                                       CGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAG                                        <  SRR4302545.9614402/94‑1 (MQ=60)
                                                        GGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGT                                       >  SRR4302545.8514191/1‑94 (MQ=60)
                                                        GGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGT                                       >  SRR4302545.9189583/1‑94 (MQ=60)
                                                        GGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGT                                       <  SRR4302545.8138991/94‑1 (MQ=60)
                                                          GCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAA                                     <  SRR4302545.3779994/94‑1 (MQ=60)
                                                          GCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAA                                     >  SRR4302545.1349147/1‑94 (MQ=60)
                                                          GCGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAA                                     <  SRR4302545.5004482/94‑1 (MQ=60)
                                                           CGATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAAT                                    >  SRR4302545.8227481/1‑94 (MQ=60)
                                                            GATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATT                                   <  SRR4302545.563679/94‑1 (MQ=60)
                                                             ATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTA                                  <  SRR4302545.4607145/94‑1 (MQ=60)
                                                             ATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTA                                  >  SRR4302545.429866/1‑94 (MQ=60)
                                                             ATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTA                                  >  SRR4302545.1140622/1‑94 (MQ=60)
                                                             ATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTA                                  >  SRR4302545.1140621/1‑94 (MQ=60)
                                                             ATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTA                                  <  SRR4302545.10708257/94‑1 (MQ=60)
                                                             ATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTA                                  <  SRR4302545.1998653/94‑1 (MQ=60)
                                                             ATAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTA                                  <  SRR4302545.259026/94‑1 (MQ=60)
                                                              TAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTAT                                 <  SRR4302545.1271346/94‑1 (MQ=60)
                                                              TAGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTAT                                 >  SRR4302545.8446926/1‑94 (MQ=60)
                                                               AGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATA                                <  SRR4302545.10518818/94‑1 (MQ=60)
                                                               AGC‑AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATA                                >  SRR4302545.2424360/1‑94 (MQ=60)
                                                                 gcAGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATAC                               <  SRR4302545.6256175/92‑1 (MQ=60)
                                                                 gcAGGATTATCCTGCAGCGTCAGGCG‑‑ACGCAGTACAGGTGAGTGCTGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATAC                               <  SRR4302545.1733543/92‑1 (MQ=60)
                                                                  CAGGATTATCCTGCATCATGAGGAG‑‑ACGCATTACAGGTGATTGCGACGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATTCA                              <  SRR4302545.2676404/94‑1 (MQ=60)
                                                                   AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACAT                             <  SRR4302545.3086371/94‑1 (MQ=60)
                                                                   AGGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACAT                             <  SRR4302545.9369919/94‑1 (MQ=60)
                                                                    GGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATT                            <  SRR4302545.2769747/94‑1 (MQ=60)
                                                                    GGATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATT                            <  SRR4302545.8127316/94‑1 (MQ=60)
                                                                      ATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTG                          <  SRR4302545.596609/94‑1 (MQ=60)
                                                                      ATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTG                          <  SRR4302545.7600548/94‑1 (MQ=60)
                                                                      ATTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTG                          <  SRR4302545.2198143/94‑1 (MQ=60)
                                                                       TTATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGT                         <  SRR4302545.10469696/94‑1 (MQ=60)
                                                                        TATCCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTT                        <  SRR4302545.1576029/94‑1 (MQ=60)
                                                                           CCTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAA                     >  SRR4302545.9380423/1‑94 (MQ=60)
                                                                            CTGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAAT                    <  SRR4302545.5652445/94‑1 (MQ=60)
                                                                             TGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATA                   <  SRR4302545.4762360/94‑1 (MQ=60)
                                                                             TGCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATA                   <  SRR4302545.160595/94‑1 (MQ=60)
                                                                              GCAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATAC                  >  SRR4302545.7998701/1‑94 (MQ=60)
                                                                               CAGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACC                 >  SRR4302545.3790771/1‑94 (MQ=60)
                                                                                AGCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCA                >  SRR4302545.6265518/1‑94 (MQ=60)
                                                                                 GCGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCAC               <  SRR4302545.4211599/94‑1 (MQ=60)
                                                                                  CGTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACT              <  SRR4302545.4786634/94‑1 (MQ=60)
                                                                                   GTCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTC             <  SRR4302545.10216183/94‑1 (MQ=60)
                                                                                    TCAGGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCT            <  SRR4302545.6522524/94‑1 (MQ=60)
                                                                                       GGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTT         >  SRR4302545.7263506/1‑94 (MQ=60)
                                                                                       GGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTT         >  SRR4302545.7263507/1‑94 (MQ=60)
                                                                                       GGCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTT         >  SRR4302545.3161457/1‑94 (MQ=60)
                                                                                        GCG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTC        <  SRR4302545.2891972/94‑1 (MQ=60)
                                                                                         CG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCT       >  SRR4302545.8028371/1‑94 (MQ=60)
                                                                                         CG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCT       >  SRR4302545.8755005/1‑94 (MQ=60)
                                                                                         CG‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCT       <  SRR4302545.4063081/94‑1 (MQ=60)
                                                                                          G‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTT      >  SRR4302545.6800623/1‑94 (MQ=60)
                                                                                          G‑‑ACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTT      >  SRR4302545.4993168/1‑94 (MQ=60)
                                                                                               C‑ATTACAGGTGATGGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCCCTCTCTTCTTACGT  <  SRR4302545.10782324/94‑1 (MQ=60)
                                                                                               |                                                                                              
GGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCGAGGATTATCCTGCAGCGTCAGGCG‑‑ACG‑ATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGT  >  NC_000913/4476975‑4477161

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑