Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,477,068 +C intergenic (‑178/‑242) b4256 ← / → yjgN hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,477,0681.C99.8% 1493.3 / ‑4.6 426intergenic (‑178/‑242)b4256/yjgNhypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (1/0);  new base C (143/282);  total (144/282)
Fisher's exact test for biased strand distribution p-value = 3.38e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 447 total aligned reads displayed.

CGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCGAGGATTATCCTGCAGCGTCAGGCGAC‑G‑ATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTC  >  NC_000913/4476974‑4477155
                                                                                                |                                                                                       
 ggTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGcgac‑gc                                                                                         >  2:4631980/1‑93 (MQ=255)
  gtgtAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGcgac‑gca                                                                                        >  1:5110715/1‑92 (MQ=255)
   tgtAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGcgac‑gcat                                                                                       >  1:10113915/1‑91 (MQ=255)
      aGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTAc                                                                                    <  2:75315/94‑1 (MQ=255)
      aGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTAc                                                                                    <  2:9430152/94‑1 (MQ=255)
       gCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACa                                                                                   >  1:9853795/1‑94 (MQ=255)
        ccTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGACGG‑ATTACAg                                                                                  >  1:6678377/1‑94 (MQ=255)
        ccTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAg                                                                                  >  1:3048009/1‑94 (MQ=255)
         cTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAgg                                                                                 <  2:4912308/94‑1 (MQ=255)
         cTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAgg                                                                                 >  1:5326436/1‑94 (MQ=255)
         cTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATACTACAGCGTCAGGCGAC‑GCATTACAgg                                                                                 >  2:9457046/1‑94 (MQ=255)
             aTCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGAt                                                                             >  1:7235529/1‑94 (MQ=255)
             aTCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGAt                                                                             >  1:380369/1‑94 (MQ=255)
             aTCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGAt                                                                             <  1:4292509/94‑1 (MQ=255)
             aTCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGAt                                                                             <  1:6172478/94‑1 (MQ=255)
              tCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGAtt                                                                            <  2:6695797/94‑1 (MQ=255)
               cAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTg                                                                           >  1:9246349/1‑94 (MQ=255)
                aGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTgc                                                                          <  2:8165046/94‑1 (MQ=255)
                aGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTgc                                                                          <  2:10130213/94‑1 (MQ=255)
                aGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTgc                                                                          >  1:7440214/1‑94 (MQ=255)
                 gCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTgcg                                                                         <  1:8547321/94‑1 (MQ=255)
                 ccGGTAATACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTgcg                                                                         <  1:3910166/93‑1 (MQ=255)
                   ggTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTgcggc                                                                       <  1:9267585/94‑1 (MQ=255)
                   ggTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTgcggc                                                                       <  1:9539873/94‑1 (MQ=255)
                    gTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTgcggcg                                                                      >  2:5057362/1‑94 (MQ=255)
                    gTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTgcggcg                                                                      >  1:7724845/1‑94 (MQ=255)
                    gTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTgcggcg                                                                      <  2:864445/94‑1 (MQ=255)
                    gTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTgcggcg                                                                      >  1:3519454/1‑94 (MQ=255)
                        gACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAAt                                                                  >  1:2135533/1‑94 (MQ=255)
                        gACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAAt                                                                  <  1:2276768/94‑1 (MQ=255)
                         aCCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATg                                                                 <  1:8079435/94‑1 (MQ=255)
                         aCCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATg                                                                 <  1:7614888/94‑1 (MQ=255)
                         aCCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTAGCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATg                                                                 <  2:5637177/94‑1 (MQ=255)
                          ccGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGt                                                                <  2:8302423/94‑1 (MQ=255)
                           cGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGtt                                                               <  2:6443533/94‑1 (MQ=255)
                               ttCGGCGGATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTc                                                           >  2:9125871/1‑94 (MQ=255)
                                 cggcggATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCAt                                                         <  2:7911085/94‑1 (MQ=255)
                                 cggcggATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCAt                                                         <  2:5738128/94‑1 (MQ=255)
                                 cggcggATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCAt                                                         >  2:3138212/1‑94 (MQ=255)
                                  ggcggATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATa                                                        <  2:220623/94‑1 (MQ=255)
                                  ggcggATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATa                                                        >  1:9782936/1‑94 (MQ=255)
                                    cggATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGt                                                      <  2:6915475/94‑1 (MQ=255)
                                    cggATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGt                                                      >  1:1461596/1‑94 (MQ=255)
                                    cggATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGt                                                      <  1:5458332/94‑1 (MQ=255)
                                     ggATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGtt                                                     <  1:4379472/94‑1 (MQ=255)
                                      gATACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGttt                                                    <  1:3416971/94‑1 (MQ=255)
                                        tACCTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTaa                                                  >  1:4997149/1‑94 (MQ=255)
                                          ccTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAAcc                                                <  1:3233313/94‑1 (MQ=255)
                                          ccTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAAcc                                                <  2:7760602/94‑1 (MQ=255)
                                          ccTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAAcc                                                <  1:8133971/94‑1 (MQ=255)
                                          ccTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAAcc                                                <  1:4596979/94‑1 (MQ=255)
                                           cTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAAccc                                               <  2:8933697/94‑1 (MQ=255)
                                           cTGACGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAAccc                                               >  2:1890094/1‑94 (MQ=255)
                                              aCGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaat                                            <  2:2773914/94‑1 (MQ=255)
                                               gagaTGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaata                                           <  2:9644253/91‑1 (MQ=255)
                                               cGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaata                                           <  2:4390135/94‑1 (MQ=255)
                                               cGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaata                                           <  1:2605934/94‑1 (MQ=255)
                                               cGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaata                                           <  2:1147561/94‑1 (MQ=255)
                                               cGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaata                                           <  2:705330/94‑1 (MQ=255)
                                               cGAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaata                                           <  2:2992427/94‑1 (MQ=255)
                                                gAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataa                                          >  1:8778680/1‑94 (MQ=255)
                                                gAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataa                                          >  1:5963365/1‑94 (MQ=255)
                                                gAATGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataa                                          <  2:451280/94‑1 (MQ=255)
                                                  aTGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaa                                        >  1:4837939/1‑94 (MQ=255)
                                                  aTGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaa                                        <  2:625521/94‑1 (MQ=255)
                                                  aTGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGACGCAATGTTATTCATAGTTTAACCCaataaaa                                        <  1:835217/94‑1 (MQ=255)
                                                   tGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaaa                                       <  2:10383454/94‑1 (MQ=255)
                                                   tGACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaaa                                       >  2:5355026/1‑94 (MQ=255)
                                                    gACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaaat                                      <  2:2483665/94‑1 (MQ=255)
                                                    gACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaaat                                      >  1:1559868/1‑94 (MQ=255)
                                                    gACGCGGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaaat                                      <  1:7013346/94‑1 (MQ=255)
                                                      cgcgGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaaataa                                    <  2:5440181/94‑1 (MQ=255)
                                                      cgcgGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaaataa                                    <  1:9336443/94‑1 (MQ=255)
                                                      cgcgGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaaataa                                    <  1:7845248/94‑1 (MQ=255)
                                                       gcgGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaaataaa                                   <  2:9820163/94‑1 (MQ=255)
                                                        cgGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAg                                  <  2:5947068/94‑1 (MQ=255)
                                                        cgGGCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAg                                  <  1:5653752/94‑1 (MQ=255)
                                                         gggCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGt                                 <  2:2375306/94‑1 (MQ=255)
                                                         gggCGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGt                                 >  1:8929936/1‑94 (MQ=255)
                                                            cGATAGC‑AGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAAt                              >  1:7999830/1‑94 (MQ=255)
                                                                tagcaGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATtat                           <  1:1243370/90‑1 (MQ=255)
                                                                 agcaGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATtata                          <  2:6185199/91‑1 (MQ=255)
                                                                 agcaGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATtata                          >  2:144574/4‑94 (MQ=255)
                                                                  gcaGGATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATAc                         <  2:4156740/92‑1 (MQ=255)
                                                                  gcaGGATTATCCTGCAGCGTCAGGCGAC‑GCAGTACAGGTGAGTGCTGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATAc                         <  1:1693319/92‑1 (MQ=255)
                                                                      gATTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACAttt                     >  2:7355117/1‑94 (MQ=255)
                                                                       aTTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTg                    <  1:7391942/94‑1 (MQ=255)
                                                                       aTTATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTg                    >  2:4355881/1‑94 (MQ=255)
                                                                        ttATCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGt                   >  2:3649272/1‑94 (MQ=255)
                                                                           tCCTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTa                <  2:1320250/94‑1 (MQ=255)
                                                                             cTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAAt              <  2:5875755/94‑1 (MQ=255)
                                                                             cTGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAAt              >  1:10259110/1‑94 (MQ=255)
                                                                              tGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATa             <  2:8486640/94‑1 (MQ=255)
                                                                              tGCAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATa             <  2:1795898/94‑1 (MQ=255)
                                                                                cAGCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATAcc           >  1:3700087/1‑94 (MQ=255)
                                                                                  gCGTCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCAc         <  1:4108772/94‑1 (MQ=255)
                                                                                     tCAGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCActct      <  1:6349087/94‑1 (MQ=255)
                                                                                       aGGCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCActctct    <  2:3918422/94‑1 (MQ=255)
                                                                                        ggCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCtctt   <  2:7177947/94‑1 (MQ=255)
                                                                                         gCGAC‑GCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCtcttc  <  1:2823642/94‑1 (MQ=255)
                                                                                                |                                                                                       
CGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCGAGGATTATCCTGCAGCGTCAGGCGAC‑G‑ATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTC  >  NC_000913/4476974‑4477155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAATTTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGATAGTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATATTTTCTTATT  >  NC_000913/4477188‑4477375
                                                                                             |                                                                                              
GTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAATTC                                                                                                >  SRR4302545.593196/1‑94 (MQ=60)
     TGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGA                                                                                          <  SRR4302545.821203/94‑1 (MQ=60)
     TGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGA                                                                                          >  SRR4302545.1499483/1‑94 (MQ=60)
     TGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGA                                                                                          >  SRR4302545.1499482/1‑94 (MQ=60)
     TGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGA                                                                                          <  SRR4302545.147760/94‑1 (MQ=60)
       CCAGCCTATTACTGTTAAGAGTATTGTAACGTGGCAGAACATTTTACCGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAAT                                                                                        >  SRR4302545.3018610/1‑94 (MQ=60)
       CCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAAT                                                                                        >  SRR4302545.1317925/1‑94 (MQ=60)
       CCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAAT                                                                                        >  SRR4302545.3018611/1‑94 (MQ=60)
        CCGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATT                                                                                       >  SRR4302545.6644210/1‑94 (MQ=60)
        CAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATT                                                                                       <  SRR4302545.3215546/94‑1 (MQ=60)
        CAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATT                                                                                       >  SRR4302545.6693964/1‑94 (MQ=60)
         AGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTT                                                                                      >  SRR4302545.5849936/1‑94 (MQ=60)
         AGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTT                                                                                      >  SRR4302545.5849939/1‑94 (MQ=60)
           CCTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTT                                                                                    <  SRR4302545.9007526/94‑1 (MQ=60)
           CCTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTT                                                                                    >  SRR4302545.7704146/1‑94 (MQ=60)
           CCTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTT                                                                                    <  SRR4302545.2692285/94‑1 (MQ=60)
            CTATTACTGATAAGAGTATTGTAAGGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTA                                                                                   <  SRR4302545.1776890/94‑1 (MQ=60)
            CTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTA                                                                                   <  SRR4302545.8030206/94‑1 (MQ=60)
            CTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTA                                                                                   >  SRR4302545.9032656/1‑94 (MQ=60)
            CTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTA                                                                                   >  SRR4302545.905552/1‑94 (MQ=60)
            CTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTA                                                                                   >  SRR4302545.8767568/1‑94 (MQ=60)
             TATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTAT                                                                                  >  SRR4302545.10742163/1‑94 (MQ=60)
             TATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTAT                                                                                  >  SRR4302545.8047662/1‑94 (MQ=60)
             TATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTAT                                                                                  <  SRR4302545.8814319/94‑1 (MQ=60)
              ATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATG                                                                                 >  SRR4302545.7658920/1‑94 (MQ=60)
              ATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATG                                                                                 >  SRR4302545.5752075/1‑94 (MQ=60)
              ATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATG                                                                                 >  SRR4302545.6870160/1‑94 (MQ=60)
              ATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATG                                                                                 >  SRR4302545.3923529/1‑94 (MQ=60)
              ATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATG                                                                                 >  SRR4302545.4851363/1‑94 (MQ=60)
              ATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATG                                                                                 >  SRR4302545.9007691/1‑94 (MQ=60)
               TTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGG                                                                                >  SRR4302545.1669421/1‑94 (MQ=60)
                TACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGC                                                                               >  SRR4302545.3428728/1‑94 (MQ=60)
                 ACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCT                                                                              <  SRR4302545.2901764/94‑1 (MQ=60)
                  CTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTC                                                                             >  SRR4302545.5793594/1‑94 (MQ=60)
                  CTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTC                                                                             >  SRR4302545.2999911/1‑94 (MQ=60)
                  CTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTC                                                                             >  SRR4302545.6185059/1‑94 (MQ=60)
                  CTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTC                                                                             >  SRR4302545.1193099/1‑94 (MQ=60)
                  CTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTC                                                                             >  SRR4302545.1329622/1‑94 (MQ=60)
                  CTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTC                                                                             >  SRR4302545.719807/1‑94 (MQ=60)
                  CTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTC                                                                             >  SRR4302545.6328338/1‑94 (MQ=60)
                  CTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTA                                                                             >  SRR4302545.5793595/1‑94 (MQ=60)
                   TGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCA                                                                            >  SRR4302545.5895556/1‑94 (MQ=60)
                   TGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCA                                                                            >  SRR4302545.7488675/1‑94 (MQ=60)
                    GATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAA                                                                           >  SRR4302545.5910666/1‑94 (MQ=60)
                     ATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAG                                                                          <  SRR4302545.3821999/94‑1 (MQ=60)
                     ATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAG                                                                          <  SRR4302545.9584578/94‑1 (MQ=60)
                     ATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAG                                                                          >  SRR4302545.3265844/1‑94 (MQ=60)
                      TAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGT                                                                         <  SRR4302545.2000893/94‑1 (MQ=60)
                      TAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGT                                                                         <  SRR4302545.7188334/94‑1 (MQ=60)
                       AAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTT                                                                        <  SRR4302545.4549600/94‑1 (MQ=60)
                       AAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTT                                                                        <  SRR4302545.6747522/94‑1 (MQ=60)
                       AAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTT                                                                        >  SRR4302545.10042025/1‑94 (MQ=60)
                       AAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTT                                                                        <  SRR4302545.6747521/94‑1 (MQ=60)
                        AGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTA                                                                       >  SRR4302545.9400361/1‑94 (MQ=60)
                         GAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTAT                                                                      >  SRR4302545.5576109/1‑94 (MQ=60)
                         GAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTAT                                                                      >  SRR4302545.7989561/1‑94 (MQ=60)
                         GAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTAT                                                                      <  SRR4302545.376702/94‑1 (MQ=60)
                           GTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTA                                                                    >  SRR4302545.6529699/1‑94 (MQ=60)
                           GTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTA                                                                    >  SRR4302545.8897174/1‑94 (MQ=60)
                           GTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTA                                                                    >  SRR4302545.391511/1‑94 (MQ=60)
                           GTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTA                                                                    >  SRR4302545.7905500/1‑94 (MQ=60)
                           GTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTA                                                                    <  SRR4302545.7640024/94‑1 (MQ=60)
                           GTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTA                                                                    <  SRR4302545.3335969/94‑1 (MQ=60)
                           GTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTA                                                                    <  SRR4302545.8555457/94‑1 (MQ=60)
                           GTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTA                                                                    <  SRR4302545.8555456/94‑1 (MQ=60)
                           GTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTA                                                                    >  SRR4302545.6529698/1‑94 (MQ=60)
                           GTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTA                                                                    >  SRR4302545.10878941/1‑94 (MQ=60)
                            TATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAA                                                                   >  SRR4302545.9565221/1‑94 (MQ=60)
                            TATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAA                                                                   >  SRR4302545.9109516/1‑94 (MQ=60)
                             ATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAAT                                                                  >  SRR4302545.5837501/1‑94 (MQ=60)
                             ATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAAT                                                                  >  SRR4302545.8671733/1‑94 (MQ=60)
                             ATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAAT                                                                  <  SRR4302545.8770913/94‑1 (MQ=60)
                             ATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAAT                                                                  >  SRR4302545.9223469/1‑94 (MQ=60)
                               TGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGA                                                                >  SRR4302545.7255087/1‑94 (MQ=60)
                               TGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGA                                                                >  SRR4302545.10010553/1‑94 (MQ=60)
                               TGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGA                                                                <  SRR4302545.8617581/94‑1 (MQ=60)
                               TGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGA                                                                <  SRR4302545.10417383/94‑1 (MQ=60)
                               TGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGA                                                                >  SRR4302545.18044/1‑94 (MQ=60)
                                GTAACGTGGCAGAACATTTTACTCTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGTTCAAGTTATTAATGAA                                                               <  SRR4302545.5991934/94‑1 (MQ=60)
                                  AACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAAT                                                             <  SRR4302545.4576183/94‑1 (MQ=60)
                                  AACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAAT                                                             >  SRR4302545.6962027/1‑94 (MQ=60)
                                   ACGTGGCAGAACATTTTACTGTCTGTATATATAAGCTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATG                                                            >  SRR4302545.10685722/1‑94 (MQ=60)
                                    CGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGG                                                           >  SRR4302545.4905908/1‑94 (MQ=60)
                                    CGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGG                                                           <  SRR4302545.3799863/94‑1 (MQ=60)
                                    CGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGG                                                           <  SRR4302545.3799862/94‑1 (MQ=60)
                                    CGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGG                                                           <  SRR4302545.8239883/94‑1 (MQ=60)
                                     GTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGA                                                          >  SRR4302545.5502035/1‑94 (MQ=60)
                                      TGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT                                                         <  SRR4302545.1113438/94‑1 (MQ=60)
                                       GGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGATG                                                        <  SRR4302545.649527/94‑1 (MQ=60)
                                       GGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGATG                                                        >  SRR4302545.10537269/1‑94 (MQ=60)
                                       GGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGATG                                                        >  SRR4302545.10896821/1‑94 (MQ=60)
                                       GGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGATG                                                        <  SRR4302545.3333690/94‑1 (MQ=60)
                                        GCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGATgt                                                       <  SRR4302545.4793117/94‑3 (MQ=60)
                                        GCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGATgt                                                       >  SRR4302545.6087414/1‑92 (MQ=60)
                                         CAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTT                                                     >  SRR4302545.9472598/1‑94 (MQ=60)
                                         CAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTT                                                     >  SRR4302545.5924658/1‑94 (MQ=60)
                                         CAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTT                                                     >  SRR4302545.5924657/1‑94 (MQ=60)
                                          AGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCTAGTTATTAATGAAATGGAT‑GTTC                                                    >  SRR4302545.5991225/1‑94 (MQ=60)
                                          AGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTTTTAATGAAATGGAT‑GTTC                                                    >  SRR4302545.9391464/1‑94 (MQ=60)
                                          AGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTC                                                    <  SRR4302545.4702741/94‑1 (MQ=60)
                                          AGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTC                                                    >  SRR4302545.9108287/1‑94 (MQ=60)
                                          AGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTC                                                    >  SRR4302545.390019/1‑94 (MQ=60)
                                          AGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTC                                                    >  SRR4302545.849749/1‑94 (MQ=60)
                                          AGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTC                                                    <  SRR4302545.10880148/94‑1 (MQ=60)
                                          AGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTC                                                    >  SRR4302545.7062781/1‑94 (MQ=60)
                                          AGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTC                                                    >  SRR4302545.3656034/1‑94 (MQ=60)
                                          AGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTC                                                    >  SRR4302545.1737736/1‑94 (MQ=60)
                                           GAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCC                                                   >  SRR4302545.9486089/1‑94 (MQ=60)
                                           GAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCC                                                   <  SRR4302545.597624/94‑1 (MQ=60)
                                           GAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCC                                                   <  SRR4302545.2615344/94‑1 (MQ=60)
                                           GAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCC                                                   >  SRR4302545.2703831/1‑94 (MQ=60)
                                           GAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCC                                                   >  SRR4302545.3217055/1‑94 (MQ=60)
                                           GAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAAGGGAT‑GTTCC                                                   <  SRR4302545.677633/94‑1 (MQ=60)
                                           GAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAACGGAT‑GTTCC                                                   >  SRR4302545.9268307/1‑94 (MQ=60)
                                            AACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCG                                                  >  SRR4302545.7385597/1‑94 (MQ=60)
                                             ACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGT                                                 >  SRR4302545.8734439/1‑94 (MQ=60)
                                             ACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGT                                                 >  SRR4302545.8734438/1‑94 (MQ=60)
                                               ATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCC                                               >  SRR4302545.2072374/1‑94 (MQ=60)
                                               ATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCC                                               >  SRR4302545.467332/1‑94 (MQ=60)
                                                TTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCC                                              >  SRR4302545.7503826/1‑94 (MQ=60)
                                                 TTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCA                                             >  SRR4302545.2128794/1‑94 (MQ=60)
                                                   TACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATT                                           <  SRR4302545.5378719/94‑1 (MQ=60)
                                                    ACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTC                                          <  SRR4302545.5916556/94‑1 (MQ=60)
                                                     CTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCG                                         >  SRR4302545.9482275/1‑94 (MQ=60)
                                                     CTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCG                                         >  SRR4302545.8315131/1‑94 (MQ=60)
                                                     CTGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCG                                         >  SRR4302545.9482276/1‑94 (MQ=60)
                                                      TGTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGT                                        >  SRR4302545.5014551/1‑94 (MQ=60)
                                                       GTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTT                                       >  SRR4302545.4315517/1‑94 (MQ=60)
                                                       GTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTT                                       >  SRR4302545.158931/1‑94 (MQ=60)
                                                       GTCTGTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTT                                       >  SRR4302545.10469212/1‑94 (MQ=60)
                                                           GTATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTT                                   >  SRR4302545.5975241/1‑94 (MQ=60)
                                                            TATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTT                                  >  SRR4302545.2878788/1‑94 (MQ=60)
                                                             ATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTT                                 >  SRR4302545.3627816/1‑94 (MQ=60)
                                                             ATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTT                                 <  SRR4302545.9237918/94‑1 (MQ=60)
                                                             ATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTT                                 >  SRR4302545.8824085/1‑94 (MQ=60)
                                                             ATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTT                                 <  SRR4302545.10517984/94‑1 (MQ=60)
                                                             ATATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTT                                 >  SRR4302545.1574857/1‑94 (MQ=60)
                                                              TATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTT                                >  SRR4302545.2426303/1‑94 (MQ=60)
                                                               ATATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTGCCATTCGGTTGTTTTTC                               >  SRR4302545.4002566/1‑94 (MQ=60)
                                                                TATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCA                              >  SRR4302545.8142076/1‑94 (MQ=60)
                                                                TATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCA                              <  SRR4302545.4818830/94‑1 (MQ=60)
                                                                TATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCA                              <  SRR4302545.5643578/94‑1 (MQ=60)
                                                                TATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCA                              >  SRR4302545.8142075/1‑94 (MQ=60)
                                                                TATAAGTTATATCAATGGATTTTGTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCA                              <  SRR4302545.7460793/94‑1 (MQ=60)
                                                                 ATAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCAT                             >  SRR4302545.1983697/1‑94 (MQ=60)
                                                                  TAAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATG                            >  SRR4302545.5150780/1‑94 (MQ=60)
                                                                   AAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGG                           >  SRR4302545.6913431/1‑94 (MQ=60)
                                                                   AAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGG                           >  SRR4302545.6346221/1‑94 (MQ=60)
                                                                   AAGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTCTGTTTTTCATGG                           <  SRR4302545.10755829/94‑1 (MQ=60)
                                                                    AGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGT                          <  SRR4302545.4465954/94‑1 (MQ=60)
                                                                    AGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGT                          >  SRR4302545.7207829/1‑94 (MQ=60)
                                                                    AGTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGT                          >  SRR4302545.6658915/1‑94 (MQ=60)
                                                                     GTTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTA                         >  SRR4302545.10132192/1‑94 (MQ=60)
                                                                      TTATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATAGAT‑GTTCCGTCCCATTCGTTTGTTTTTtattgtta                        >  SRR4302545.7352854/1‑86 (MQ=60)
                                                                        ATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAG                      >  SRR4302545.5101924/1‑94 (MQ=60)
                                                                        ATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAG                      <  SRR4302545.7142312/94‑1 (MQ=60)
                                                                        ATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAG                      <  SRR4302545.5844111/94‑1 (MQ=60)
                                                                        ATATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAG                      <  SRR4302545.5844112/94‑1 (MQ=60)
                                                                         TATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGG                     >  SRR4302545.10657610/1‑94 (MQ=60)
                                                                         TATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGG                     <  SRR4302545.8492400/94‑1 (MQ=60)
                                                                          ATCAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGT                    >  SRR4302545.8124444/1‑94 (MQ=60)
                                                                           TCAATGGATTTTTTAA‑TTCAGGGGATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTG                   >  SRR4302545.6906341/1‑94 (MQ=60)
                                                                            CAATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGA                  >  SRR4302545.5329060/1‑94 (MQ=60)
                                                                             AATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAG                 >  SRR4302545.6120094/1‑94 (MQ=60)
                                                                             AATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAG                 <  SRR4302545.6996760/94‑1 (MQ=60)
                                                                             AATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAG                 >  SRR4302545.6120093/1‑94 (MQ=60)
                                                                              ATGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGA                >  SRR4302545.4959054/1‑94 (MQ=60)
                                                                               TGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAG               <  SRR4302545.1936639/94‑1 (MQ=60)
                                                                               TGGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAG               <  SRR4302545.1936641/94‑1 (MQ=60)
                                                                                GGATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGA              <  SRR4302545.10062964/94‑1 (MQ=60)
                                                                                 GATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGAT             >  SRR4302545.10031064/1‑94 (MQ=60)
                                                                                 GATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGAT             >  SRR4302545.8077039/1‑94 (MQ=60)
                                                                                 GATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGAT             <  SRR4302545.7607322/94‑1 (MQ=60)
                                                                                  ATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATA            <  SRR4302545.1347367/94‑1 (MQ=60)
                                                                                  ATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATA            >  SRR4302545.2231582/1‑94 (MQ=60)
                                                                                  ATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATA            >  SRR4302545.933678/1‑94 (MQ=60)
                                                                                  ATTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATA            >  SRR4302545.933677/1‑94 (MQ=60)
                                                                                   TTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATAT           >  SRR4302545.7345278/1‑94 (MQ=60)
                                                                                   TTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATAT           >  SRR4302545.5676252/1‑94 (MQ=60)
                                                                                   TTTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATAT           >  SRR4302545.4940964/1‑94 (MQ=60)
                                                                                    TTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATATT          >  SRR4302545.8367217/1‑94 (MQ=60)
                                                                                    TTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATATT          >  SRR4302545.9822513/1‑94 (MQ=60)
                                                                                    TTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATATT          >  SRR4302545.1650554/1‑94 (MQ=60)
                                                                                    TTTTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATATT          >  SRR4302545.8367216/1‑94 (MQ=60)
                                                                                      TTTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATATTTT        <  SRR4302545.3738411/94‑1 (MQ=60)
                                                                                       TTAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATATTTTC       <  SRR4302545.7177991/94‑1 (MQ=60)
                                                                                        TAA‑TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATATTTTCT      >  SRR4302545.4483628/1‑94 (MQ=60)
                                                                                          AATTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATATTTTCTT     >  SRR4302545.9234972/1‑94 (MQ=60)
                                                                                          AATTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATATTTTCTT     >  SRR4302545.4337809/1‑94 (MQ=60)
                                                                                          AATTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATATTTTCTT     >  SRR4302545.6270248/1‑94 (MQ=60)
                                                                                          AATTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATATTTTCTT     >  SRR4302545.4337808/1‑94 (MQ=60)
                                                                                          AATTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATATTTTCTT     >  SRR4302545.10389065/1‑94 (MQ=60)
                                                                                          AATTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATATTTTCTT     >  SRR4302545.1511710/1‑94 (MQ=60)
                                                                                           ATTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATATTTTCTTA    <  SRR4302545.293975/94‑1 (MQ=60)
                                                                                           ATTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATATTTTCTTA    <  SRR4302545.9729196/94‑1 (MQ=60)
                                                                                           ATTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATATTTTCTTA    <  SRR4302545.9728962/94‑1 (MQ=60)
                                                                                           ATTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATATTTTCTTA    >  SRR4302545.7588002/1‑94 (MQ=60)
                                                                                            TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATATTTTCTTAT   <  SRR4302545.7341736/94‑1 (MQ=60)
                                                                                            TTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATATTTTCTTAT   <  SRR4302545.8528073/94‑1 (MQ=60)
                                                                                             TCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGAT‑GTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATATTTTCTTATT  >  SRR4302545.4857037/1‑94 (MQ=60)
                                                                                             |                                                                                              
GTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTCTGTATATATAAGTTATATCAATGGATTTTTTAATTTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGATAGTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATATTTTCTTATT  >  NC_000913/4477188‑4477375

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑