Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	647	270.1	21258240	98.4%	20918108	94.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,574,258	A→G	M355V (ATG→GTG)	mcrD →	McrD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,574,258	0	A	G	98.2%	1650.1 / 9.2	491	M355V (ATG→GTG)	mcrD	McrD
Reads supporting (aligned to +/- strand): ref base A (4/5); new base G (250/232); total (254/237)
Fisher's exact test for biased strand distribution p-value = 7.44e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.76e-01

Only 100 of 508 total aligned reads displayed.

GTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGC  >  NC_000913/4574167‑4574349

  tctaCTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTggg                                                                                         <  1:9445380/91‑1 (MQ=255)

  tCGACTCGCCGCGCGATATCCCTCACCATCGTATACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTggg                                                                                         <  2:10242284/94‑1 (MQ=255)

   cGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGc                                                                                        >  2:1509687/1‑94 (MQ=255)

   cGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGc                                                                                        <  1:3093683/94‑1 (MQ=255)

   cGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGGGGGc                                                                                        >  2:852296/1‑94 (MQ=255)

     aCTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGGCAGGTATTGAAGATCCGCTTCGATCAGGGGGCGGGCTa                                                                                      >  1:7814690/1‑94 (MQ=255)

      cTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTAc                                                                                     >  1:5176784/1‑94 (MQ=255)

      cTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTAc                                                                                     <  2:4635839/94‑1 (MQ=255)

       tCGCCGCGCGATATCCCTCACCATCGTAAACGGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACt                                                                                    <  1:452710/94‑1 (MQ=255)

        cgccgcGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTg                                                                                   <  2:3440845/94‑1 (MQ=255)

         gccgcGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTgg                                                                                  >  1:7442588/1‑94 (MQ=255)

          ccgcGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGgc                                                                                 >  2:8906398/1‑94 (MQ=255)

              gcgATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCAt                                                                             <  1:4406965/94‑1 (MQ=255)

              gcgATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGGGGGCTACTGGCGCAt                                                                             >  2:1950161/1‑94 (MQ=255)

               tgATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATc                                                                            >  1:5496475/2‑94 (MQ=255)

               cgATAACCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGATGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATc                                                                            <  2:8301798/94‑1 (MQ=255)

                 atatCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCaa                                                                          >  2:3613258/1‑94 (MQ=255)

                  tatCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAAc                                                                         <  2:3767465/94‑1 (MQ=255)

                  tatCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAAc                                                                         >  1:580424/1‑94 (MQ=255)

                   atCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACt                                                                        >  2:10610387/1‑94 (MQ=255)

                    tCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACtt                                                                       <  2:1270453/94‑1 (MQ=255)

                      ccTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACtttt                                                                     >  2:10507757/1‑94 (MQ=255)

                       cTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTc                                                                    <  1:6494527/94‑1 (MQ=255)

                         cACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCAt                                                                  <  1:5611201/94‑1 (MQ=255)

                          aCCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATc                                                                 <  1:492830/94‑1 (MQ=255)

                           ccATCGTATTCTGACGGTGACTTTTGAGGATGGTCAGGTGTTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAAAATTTCATca                                                                <  1:9371960/94‑2 (MQ=255)

                           ccATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCg                                                                <  2:4474380/94‑1 (MQ=255)

                            cATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGc                                                               <  1:6566259/94‑1 (MQ=255)

                            cATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGc                                                               >  1:1885024/1‑94 (MQ=255)

                            cATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGc                                                               >  1:2563850/1‑94 (MQ=255)

                             aTCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCa                                                              >  2:9752937/1‑94 (MQ=255)

                             aTCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCa                                                              >  1:10286203/1‑94 (MQ=255)

                               cGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAAt                                                            >  1:8202787/1‑94 (MQ=255)

                                 tAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATgg                                                          <  2:206654/94‑1 (MQ=255)

                                 tAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATgg                                                          <  2:7805262/94‑1 (MQ=255)

                                  aaaCTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGc                                                         >  1:10400027/1‑94 (MQ=255)

                                   aaCTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCa                                                        <  1:362098/94‑1 (MQ=255)

                                    aCTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCAt                                                       <  2:3167614/94‑1 (MQ=255)

                                     cTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCAtt                                                      <  2:9523922/94‑1 (MQ=255)

                                     cTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCAtt                                                      >  1:6061719/1‑94 (MQ=255)

                                     cTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCAtt                                                      >  1:8803746/1‑94 (MQ=255)

                                      tGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTa                                                     <  2:1633806/94‑1 (MQ=255)

                                      tGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTa                                                     >  2:6188466/1‑94 (MQ=255)

                                       gACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTAc                                                    <  1:6232519/94‑1 (MQ=255)

                                        aCGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACt                                                   <  2:6852786/94‑1 (MQ=255)

                                          ggTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACttt                                                 <  1:10122874/94‑1 (MQ=255)

                                          ggTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACttt                                                 >  1:7640354/1‑94 (MQ=255)

                                          ggTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGGGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACttt                                                 >  2:5658764/1‑94 (MQ=255)

                                           gTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTg                                                <  1:7990418/94‑1 (MQ=255)

                                            tGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGa                                               >  2:663318/1‑94 (MQ=255)

                                              aCTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGAtt                                             >  1:3363093/1‑94 (MQ=255)

                                              aCTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGAtt                                             <  2:7601839/94‑1 (MQ=255)

                                               cTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGAttt                                            >  2:2829034/1‑94 (MQ=255)

                                                 tttGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTcc                                          <  2:2593077/94‑1 (MQ=255)

                                                 tttGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTcc                                          >  1:3850537/1‑94 (MQ=255)

                                                 tttGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTcc                                          <  1:8995151/94‑1 (MQ=255)

                                                  ttGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCcg                                         <  1:1779610/94‑1 (MQ=255)

                                                   tGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCcgc                                        >  2:7472224/1‑94 (MQ=255)

                                                    gAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCcgcg                                       >  2:1800612/1‑94 (MQ=255)

                                                     aGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGa                                      >  1:6782783/1‑94 (MQ=255)

                                                      ggATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGAt                                     <  2:1168078/94‑1 (MQ=255)

                                                      ggATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGAt                                     <  2:8047358/94‑1 (MQ=255)

                                                      ggATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGAt                                     >  2:4292486/1‑94 (MQ=255)

                                                       gATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATg                                    <  2:9048660/94‑1 (MQ=255)

                                                          ggTCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACg                                 >  2:63640/1‑94 (MQ=255)

                                                            tCAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGtt                               <  2:5385642/94‑1 (MQ=255)

                                                             cAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGttt                              <  2:4159154/94‑1 (MQ=255)

                                                             cAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGttt                              >  1:6681400/1‑94 (MQ=255)

                                                             cAGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGttt                              <  1:4229689/94‑1 (MQ=255)

                                                              aGGTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGtttc                             <  2:8645928/94‑1 (MQ=255)

                                                                gTATTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGtttctt                           >  1:3493971/1‑94 (MQ=255)

                                                                 tATTGAAGATCCGCTTCGATCAGGGGGCGGGCTACTGGCGCATCAACGTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGtttcttt                          >  2:5911300/1‑94 (MQ=255)

                                                                  aTTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGtttctttc                         >  2:6029567/1‑94 (MQ=255)

                                                                  aTTGAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGtttctttc                         >  2:5462068/1‑94 (MQ=255)

                                                                     gAAGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAg                      >  1:6413888/1‑94 (MQ=255)

                                                                      aaGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGt                     >  2:5702302/1‑94 (MQ=255)

                                                                       aGATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGGTGACGTTTCTTTCCCGtt                    >  1:9203183/1‑94 (MQ=255)

                                                                        gATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTa                   >  2:4888383/1‑94 (MQ=255)

                                                                        gATCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTa                   <  2:2367978/94‑1 (MQ=255)

                                                                        aaTCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTa                   <  2:4729307/93‑1 (MQ=255)

                                                                         aTCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAg                  <  2:3830412/94‑1 (MQ=255)

                                                                         aTCCGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAg                  <  1:2857410/94‑1 (MQ=255)

                                                                           ccGCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTc                <  2:2943308/94‑1 (MQ=255)

                                                                             gCTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCaa              <  1:4131771/94‑1 (MQ=255)

                                                                              cTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCaaa             >  1:8410651/1‑94 (MQ=255)

                                                                              cTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCaaa             >  1:8706800/1‑94 (MQ=255)

                                                                              cTTCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCaaa             >  2:5066489/1‑94 (MQ=255)

                                                                               ttCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCaaaa            <  2:6439093/94‑1 (MQ=255)

                                                                                tCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAAt           >  1:10010294/1‑94 (MQ=255)

                                                                                tCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAAt           >  1:6966747/1‑94 (MQ=255)

                                                                                tCGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAAt           <  2:4014393/94‑1 (MQ=255)

                                                                                 cGATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATg          >  1:1307107/1‑94 (MQ=255)

                                                                                  gATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATgg         >  2:2218983/1‑94 (MQ=255)

                                                                                  gATCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATgg         >  2:8138785/1‑94 (MQ=255)

                                                                                   aTCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGc        >  2:9198009/1‑94 (MQ=255)

                                                                                    tCAGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCt       <  1:247036/94‑1 (MQ=255)

                                                                                      aGGGGGTGGTCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCa     <  2:7262846/94‑1 (MQ=255)

                                                                                      aGGGGGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCa     >  1:1109646/1‑94 (MQ=255)

                                                                                       ggggGTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAg    <  1:9742714/94‑1 (MQ=255)

                                                                                        ggggTGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAgg   >  1:2041517/1‑94 (MQ=255)

GTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGC  >  NC_000913/4574167‑4574349

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 264 total aligned reads displayed.

CTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTGCGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACGCACGTCGCGATA  >  NC_000913/4582958‑4583143

CTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTAC                                                                                              <  SRR4302545.5833420/94‑1 (MQ=60)

CTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGGTATCGGCAAACCCCTGATTCTGTTTTTAC                                                                                              >  SRR4302545.5482440/1‑94 (MQ=60)

 TTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACG                                                                                             <  SRR4302545.6665135/94‑1 (MQ=60)

 TTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACG                                                                                             <  SRR4302545.1738895/94‑1 (MQ=60)

 TTTTCAACCGCGCGGACGGCATCTCCCTGATAATACCGCAGGCCCAGCTCGCTCATTCCAGGATTATCGGCAAACCACTGATTCTGTTTTTACG                                                                                             <  SRR4302545.10029543/94‑1 (MQ=60)

  TTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGG                                                                                            <  SRR4302545.8736098/94‑1 (MQ=60)

  TTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGG                                                                                            <  SRR4302545.1422885/94‑1 (MQ=60)

   ttccacccgcgcGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGT                                                                                           <  SRR4302545.5846006/82‑1 (MQ=60)

   TTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGT                                                                                           >  SRR4302545.7154293/1‑94 (MQ=60)

   TTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGT                                                                                           <  SRR4302545.2060954/94‑1 (MQ=60)

   TTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGT                                                                                           <  SRR4302545.7893706/94‑1 (MQ=60)

    TCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTT                                                                                          <  SRR4302545.1249059/94‑1 (MQ=60)

    TCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTT                                                                                          <  SRR4302545.7283657/94‑1 (MQ=60)

    TCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTT                                                                                          <  SRR4302545.1094255/94‑1 (MQ=60)

     CAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTC                                                                                         <  SRR4302545.10256102/94‑1 (MQ=60)

     CAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTC                                                                                         >  SRR4302545.8551257/1‑94 (MQ=60)

     CAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTC                                                                                         >  SRR4302545.8180441/1‑94 (MQ=60)

     CAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTC                                                                                         <  SRR4302545.8121159/94‑1 (MQ=60)

      AACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCG                                                                                        <  SRR4302545.8781906/94‑1 (MQ=60)

      AACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCG                                                                                        <  SRR4302545.4596974/94‑1 (MQ=60)

       ACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGC                                                                                       >  SRR4302545.2762768/1‑94 (MQ=60)

       ACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGC                                                                                       >  SRR4302545.2762769/1‑94 (MQ=60)

       ACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGC                                                                                       <  SRR4302545.4552645/94‑1 (MQ=60)

        cagcaCGGACGGCATGTTCTTGATAATAACGCAGTCCAAGCTCGCTCATGCCAAATTTTGCGGCAAACCACTGATTCTGTTTTTACGGTTCGCT                                                                                      <  SRR4302545.4292061/89‑1 (MQ=33)

        CCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCT                                                                                      >  SRR4302545.2059263/1‑94 (MQ=60)

        CCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCT                                                                                      <  SRR4302545.5129078/94‑1 (MQ=60)

        CCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCT                                                                                      <  SRR4302545.7356260/94‑1 (MQ=60)

        CCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCT                                                                                      <  SRR4302545.7356259/94‑1 (MQ=60)

         CGCGTGGACGTCATCTTCCTGATAATAACGCAGGACCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTG                                                                                     <  SRR4302545.3167625/94‑1 (MQ=60)

         CGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTG                                                                                     <  SRR4302545.10870623/94‑1 (MQ=60)

         CGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTG                                                                                     <  SRR4302545.2621152/94‑1 (MQ=60)

         CGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTG                                                                                     >  SRR4302545.8967866/1‑94 (MQ=60)

         CGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCAAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTG                                                                                     <  SRR4302545.9032454/94‑1 (MQ=60)

           CGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCC                                                                                   <  SRR4302545.2497291/94‑1 (MQ=60)

            GCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCG                                                                                  >  SRR4302545.9510048/1‑94 (MQ=60)

            GCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCG                                                                                  <  SRR4302545.810509/94‑1 (MQ=60)

            GCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCG                                                                                  <  SRR4302545.5839656/94‑1 (MQ=60)

             CGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGA                                                                                 >  SRR4302545.3313988/1‑94 (MQ=60)

              GGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAG                                                                                <  SRR4302545.10223248/94‑1 (MQ=60)

              GGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTCCCGAG                                                                                >  SRR4302545.9114054/1‑94 (MQ=60)

               GACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGC                                                                               >  SRR4302545.4890926/1‑94 (MQ=60)

                GCGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCA                                                                              <  SRR4302545.8686019/94‑1 (MQ=60)

                  GGCATCTTCCTGATAATAACGCAGGCCCAGCTGGCTCATGCCAGGGATATCGGCAAACCACTGATTCTGTTTTTACGGGTCGCTGCCGAGCATT                                                                            >  SRR4302545.7102065/1‑94 (MQ=60)

                   GCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTT                                                                           <  SRR4302545.4270880/94‑1 (MQ=60)

                     ATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCC                                                                         >  SRR4302545.3009234/1‑94 (MQ=60)

                     ATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCC                                                                         >  SRR4302545.6044870/1‑94 (MQ=60)

                     ATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCC                                                                         >  SRR4302545.7301128/1‑94 (MQ=60)

                     ATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCC                                                                         <  SRR4302545.1048415/94‑1 (MQ=60)

                     ATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCC                                                                         >  SRR4302545.10504750/1‑94 (MQ=60)

                     ATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCC                                                                         >  SRR4302545.9124462/1‑94 (MQ=60)

                      TCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCA                                                                        >  SRR4302545.8846100/1‑94 (MQ=60)

                       CTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCCTTTCCAG                                                                       >  SRR4302545.4908437/1‑94 (MQ=60)

                       CTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAG                                                                       >  SRR4302545.3706159/1‑94 (MQ=60)

                        TTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGC                                                                      >  SRR4302545.2588782/1‑94 (MQ=60)

                        TTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGC                                                                      <  SRR4302545.2014273/94‑1 (MQ=60)

                        TTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGC                                                                      >  SRR4302545.1170258/1‑94 (MQ=60)

                        TTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGC                                                                      <  SRR4302545.3107577/94‑1 (MQ=60)

                        TTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGC                                                                      >  SRR4302545.10036811/1‑94 (MQ=60)

                         TCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCA                                                                     >  SRR4302545.2349664/1‑94 (MQ=60)

                         TCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCA                                                                     <  SRR4302545.3177326/94‑1 (MQ=60)

                          CCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAG                                                                    >  SRR4302545.3418595/1‑94 (MQ=60)

                          CCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGAATTTACAGCAC                                                                    >  SRR4302545.5252852/1‑94 (MQ=60)

                           CTTATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGC                                                                   <  SRR4302545.6111676/94‑1 (MQ=60)

                           CTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGC                                                                   >  SRR4302545.3867505/1‑94 (MQ=60)

                            TGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCT                                                                  >  SRR4302545.8407903/1‑94 (MQ=60)

                            TGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCT                                                                  >  SRR4302545.6571207/1‑94 (MQ=60)

                            TGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGCTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCCTTTCCAGCAGCT                                                                  >  SRR4302545.8076889/1‑94 (MQ=60)

                             GATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTC                                                                 >  SRR4302545.4642116/1‑94 (MQ=60)

                              ATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCT                                                                <  SRR4302545.2766395/94‑1 (MQ=60)

                              ATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCT                                                                >  SRR4302545.5706995/1‑94 (MQ=60)

                              ATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCT                                                                <  SRR4302545.1570645/94‑1 (MQ=60)

                              ATAAGAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCT                                                                <  SRR4302545.8355567/94‑1 (MQ=60)

                               TAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTT                                                               <  SRR4302545.6941267/94‑1 (MQ=60)

                                AATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTC                                                              <  SRR4302545.7947169/94‑1 (MQ=60)

                                AATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTC                                                              >  SRR4302545.9140710/1‑94 (MQ=60)

                                AATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTC                                                              <  SRR4302545.7528223/94‑1 (MQ=60)

                                 ATACCGCAGGCCCAGCTAGCTCATGCCAGCGTTATCGGCAAACCCCTGATTCTGTTTTTACGGTTCGCTCCCGAGCATTTCCAGCAGCTCTTCC                                                             <  SRR4302545.7709148/94‑1 (MQ=60)

                                 ATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCGAGCATCTCTTCC                                                             >  SRR4302545.9648163/1‑94 (MQ=60)

                                 ATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCC                                                             >  SRR4302545.9890046/1‑94 (MQ=60)

                                 ATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCC                                                             >  SRR4302545.9869088/1‑94 (MQ=60)

                                  TAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCG                                                            <  SRR4302545.10207817/94‑1 (MQ=60)

                                    ACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGG                                                          <  SRR4302545.1133227/94‑1 (MQ=60)

                                     CGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGC                                                         >  SRR4302545.10370146/1‑94 (MQ=60)

                                     CGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGC                                                         >  SRR4302545.288142/1‑94 (MQ=60)

                                       CAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAcaccttccgggcgt                                                       >  SRR4302545.10149396/1‑80 (MQ=60)

                                        AGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGT                                                      <  SRR4302545.6568662/94‑1 (MQ=60)

                                         GGCCCAGCTCGCTCATGCCAGGTTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTG                                                     <  SRR4302545.3903207/94‑1 (MQ=60)

                                         GGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTG                                                     <  SRR4302545.9880614/94‑1 (MQ=60)

                                          GCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGC                                                    <  SRR4302545.6887274/94‑1 (MQ=60)

                                            CCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCA                                                  >  SRR4302545.10703498/1‑94 (MQ=60)

                                             CAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCAC                                                 >  SRR4302545.8586383/1‑94 (MQ=60)

                                             CAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGCTCGCTGCCGAGCATTTCCAGCAGCTCTTCCCGGCGGGGCCAC                                                 >  SRR4302545.8904977/1‑94 (MQ=60)

                                             CAGATCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACAGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCTGGCGGTGCCAC                                                 >  SRR4302545.7630844/1‑94 (MQ=60)

                                              AGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACT                                                <  SRR4302545.1107732/94‑1 (MQ=60)

                                              AGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACT                                                <  SRR4302545.10322251/94‑1 (MQ=60)

                                              AGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACT                                                >  SRR4302545.516274/1‑94 (MQ=60)

                                              AGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACT                                                >  SRR4302545.9470314/1‑94 (MQ=60)

                                               GCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTC                                               <  SRR4302545.5905757/94‑1 (MQ=60)

                                                CTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCGGCAGCTCTTCCGGGCGGTGCCACTCG                                              <  SRR4302545.2719001/94‑1 (MQ=60)

                                                CTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCG                                              >  SRR4302545.6057391/1‑94 (MQ=60)

                                                CTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCG                                              >  SRR4302545.1002435/1‑94 (MQ=60)

                                                CTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCG                                              >  SRR4302545.5748884/1‑94 (MQ=60)

                                                 TCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGG                                             <  SRR4302545.8215873/94‑1 (MQ=60)

                                                 TCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGG                                             <  SRR4302545.4274837/94‑1 (MQ=60)

                                                 TCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGG                                             <  SRR4302545.6975228/94‑1 (MQ=60)

                                                 TCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGG                                             >  SRR4302545.888996/1‑94 (MQ=60)

                                                 TCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGG                                             <  SRR4302545.3127805/94‑1 (MQ=60)

                                                 TCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGG                                             <  SRR4302545.10051676/94‑1 (MQ=60)

                                                  CGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGG                                            <  SRR4302545.5036146/94‑1 (MQ=60)

                                                   GCGCATGGCAGTGTTACCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCGGCGGTTCTTCCGGGCGGggtgacgcgggt                                           <  SRR4302545.7982946/94‑13 (MQ=50)

                                                     TCTTGCCAGTGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTTCAGCAGCTCTTCCGGGCGGTGCCATTCGTGTAA                                         >  SRR4302545.9639426/1‑94 (MQ=60)

                                                      CATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAG                                        <  SRR4302545.144489/94‑1 (MQ=60)

                                                      CATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAG                                        >  SRR4302545.10875017/1‑94 (MQ=60)

                                                      CATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAG                                        <  SRR4302545.10329923/94‑1 (MQ=60)

                                                      CATGCCAGCGTTATCGGCAAACCACTGACTCTGTTTTTACGCTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCCGTGCCACTCGGGTAAG                                        <  SRR4302545.8192859/94‑1 (MQ=60)

                                                       ATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGG                                       >  SRR4302545.6780148/1‑94 (MQ=60)

                                                       ATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGG                                       >  SRR4302545.428453/1‑94 (MQ=60)

                                                        TGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGC                                      >  SRR4302545.3831990/1‑94 (MQ=60)

                                                         GCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCT                                     >  SRR4302545.3105157/1‑94 (MQ=60)

                                                         GCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCT                                     >  SRR4302545.6271235/1‑94 (MQ=60)

                                                         GCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCT                                     >  SRR4302545.5346063/1‑94 (MQ=60)

                                                          CCAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTT                                    >  SRR4302545.10640593/1‑94 (MQ=60)

                                                           CAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTT                                   >  SRR4302545.4323478/1‑94 (MQ=60)

                                                           CAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTT                                   >  SRR4302545.1897422/1‑94 (MQ=60)

                                                           CAGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTATTCCGGGCGGTGCCACTCGGGTAAGGCTTT                                   <  SRR4302545.3675943/94‑1 (MQ=60)

                                                            AGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTC                                  >  SRR4302545.758983/1‑94 (MQ=60)

                                                            AGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTC                                  >  SRR4302545.6358801/1‑94 (MQ=60)

                                                            AGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTC                                  <  SRR4302545.1459575/94‑1 (MQ=60)

                                                            AGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTC                                  <  SRR4302545.8247534/94‑1 (MQ=60)

                                                            AGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTC                                  >  SRR4302545.9809228/1‑94 (MQ=60)

                                                            AGGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTC                                  >  SRR4302545.7379856/1‑94 (MQ=60)

                                                             GGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCG                                 <  SRR4302545.3417040/94‑1 (MQ=60)

                                                             GGGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCG                                 >  SRR4302545.4722303/1‑94 (MQ=60)

                                                             GGGTTATCGGCAAACCACAGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCG                                 <  SRR4302545.4119087/94‑1 (MQ=60)

                                                              GGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGA                                >  SRR4302545.6864878/1‑94 (MQ=60)

                                                              GGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGA                                >  SRR4302545.7397254/1‑94 (MQ=60)

                                                              GGTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGA                                >  SRR4302545.5363556/1‑94 (MQ=60)

                                                               GTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGAC                               >  SRR4302545.5223894/1‑94 (MQ=60)

                                                               GTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGAC                               <  SRR4302545.6672377/94‑1 (MQ=60)

                                                               GTTATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGAC                               >  SRR4302545.6430553/1‑94 (MQ=60)

                                                                 TATCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACAT                             >  SRR4302545.5930258/1‑94 (MQ=60)

                                                                   TCGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATAT                           <  SRR4302545.6881230/94‑1 (MQ=60)

                                                                    ccgcaacccgcgGATTCTGTTTTTACGGCCCGCTGCCGAGCAGTTCCAGCAGCTCCTCCGGGCGGTGCCACTCGAGTAAGGCTTTCGACATATT                          <  SRR4302545.7142343/82‑1 (MQ=60)

                                                                    CGGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATT                          >  SRR4302545.3768643/1‑94 (MQ=60)

                                                                     GGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTG                         >  SRR4302545.9924265/1‑94 (MQ=60)

                                                                     GGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTG                         <  SRR4302545.4773930/94‑1 (MQ=60)

                                                                     GGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTG                         <  SRR4302545.5240644/94‑1 (MQ=60)

                                                                     GGCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCCGGTAAGGCTTTCGACATATTG                         >  SRR4302545.5312056/1‑94 (MQ=60)

                                                                      GCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGC                        <  SRR4302545.2056812/94‑1 (MQ=60)

                                                                      GCAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGC                        >  SRR4302545.802069/1‑94 (MQ=60)

                                                                       CAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCG                       >  SRR4302545.10552762/1‑94 (MQ=60)

                                                                       CAAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATAATGCG                       >  SRR4302545.9646505/1‑94 (MQ=60)

                                                                        AAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGG                      <  SRR4302545.7078643/94‑1 (MQ=60)

                                                                        AAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGG                      <  SRR4302545.7078644/94‑1 (MQ=60)

                                                                        AAACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGG                      >  SRR4302545.565162/1‑94 (MQ=60)

                                                                         AACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGG                     <  SRR4302545.6910968/94‑1 (MQ=60)

                                                                         AACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGG                     <  SRR4302545.5135702/94‑1 (MQ=60)

                                                                          ACCACTTATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGT                    <  SRR4302545.7418893/94‑1 (MQ=60)

                                                                          ACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGT                    >  SRR4302545.10102133/1‑94 (MQ=60)

                                                                          ACCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGT                    <  SRR4302545.7911402/94‑1 (MQ=60)

                                                                           CCACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTA                   <  SRR4302545.2476454/94‑1 (MQ=60)

                                                                             ACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATC                 <  SRR4302545.1313331/94‑1 (MQ=60)

                                                                             ACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATC                 <  SRR4302545.6642685/94‑1 (MQ=60)

                                                                             ACTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATC                 >  SRR4302545.862758/1‑94 (MQ=60)

                                                                              CTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCCCTCGGGTAAGGCTTTCGACATATTGCGGGTATCA                <  SRR4302545.3896762/94‑1 (MQ=60)

                                                                              CTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCA                >  SRR4302545.10123129/1‑94 (MQ=60)

                                                                              CTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCA                >  SRR4302545.10737734/1‑94 (MQ=60)

                                                                              CTGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCA                <  SRR4302545.5941510/94‑1 (MQ=60)

                                                                               TGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCAC               <  SRR4302545.4711407/94‑1 (MQ=60)

                                                                               TGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCAC               <  SRR4302545.8463821/94‑1 (MQ=60)

                                                                               TGATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCAC               <  SRR4302545.5283230/94‑1 (MQ=60)

                                                                                GATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTACGGCTTTCGACATATTGCGGGTATCACG              >  SRR4302545.3282202/1‑94 (MQ=60)

                                                                                GATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACG              <  SRR4302545.8812296/94‑1 (MQ=60)

                                                                                GATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACG              <  SRR4302545.8389168/94‑1 (MQ=60)

                                                                                GATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACG              >  SRR4302545.898294/1‑94 (MQ=60)

                                                                                GATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACG              >  SRR4302545.1633144/1‑94 (MQ=60)

                                                                                 ATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACGC             >  SRR4302545.10603474/1‑94 (MQ=60)

                                                                                 ATTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACGC             >  SRR4302545.10603472/1‑94 (MQ=60)

                                                                                 ATTCTGTTTTTACGGTTCACTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACGC             >  SRR4302545.9838868/1‑94 (MQ=60)

                                                                                  TTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACGCA            >  SRR4302545.9434523/1‑94 (MQ=60)

                                                                                  TTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACGCA            <  SRR4302545.3414155/94‑1 (MQ=60)

                                                                                  TTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACGCA            >  SRR4302545.6780846/1‑94 (MQ=60)

                                                                                  TTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACGCA            <  SRR4302545.3312853/94‑1 (MQ=60)

                                                                                  TTCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGGATCACGCC            >  SRR4302545.5762458/1‑94 (MQ=60)

                                                                                   TCTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACGCAC           >  SRR4302545.5033030/1‑94 (MQ=60)

                                                                                    CTGTTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCTCGCACG          >  SRR4302545.4173407/1‑94 (MQ=60)

                                                                                       TTTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACGCACGTCG       <  SRR4302545.156506/94‑1 (MQ=60)

                                                                                        TTTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACGCACGTCGC      >  SRR4302545.10613977/1‑94 (MQ=60)

                                                                                         TTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACGCACGTCGCG     >  SRR4302545.5479354/1‑94 (MQ=60)

                                                                                         TTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACGCACGTCGCG     >  SRR4302545.5479355/1‑94 (MQ=60)

                                                                                         TTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACGCACGTCGCG     <  SRR4302545.5011345/94‑1 (MQ=60)

                                                                                         TTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACGCACGTCGCG     <  SRR4302545.4670134/94‑1 (MQ=60)

                                                                                         TTTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACGCACGTCGCG     >  SRR4302545.363279/1‑94 (MQ=60)

                                                                                          TTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACGCACGTCGCGA    >  SRR4302545.1233522/1‑94 (MQ=60)

                                                                                          TTACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACGCACGTCGCGA    >  SRR4302545.1272231/1‑94 (MQ=60)

                                                                                           TACGGTTCGCTGCCGTGCATTTCCAGCCGCTCTTCCGGGCGGCGCCACTAGGGTATGGCTTTCGACATATTGCGGGTATCACGCACGTggtgaa   >  SRR4302545.5570946/1‑88 (MQ=60)

                                                                                           TACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACGCACGTCGCGAT   >  SRR4302545.8488138/1‑94 (MQ=60)

                                                                                            TCGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACGCACGTCGCGATA  <  SRR4302545.4179242/94‑1 (MQ=60)

                                                                                            ACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACGCACGTCGCGATA  >  SRR4302545.5572264/1‑94 (MQ=60)

                                                                                            ACGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACGCACGTCGCGATA  <  SRR4302545.8732913/94‑1 (MQ=60)

CTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTGCGGTTCGCTGCCGAGCATTTCCAGCAGCTCTTCCGGGCGGTGCCACTCGGGTAAGGCTTTCGACATATTGCGGGTATCACGCACGTCGCGATA  >  NC_000913/4582958‑4583143

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`