Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
104,752 |
T→C |
I257I (ATT→ATC) |
ftsA → |
ATP‑binding cell division protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 104,752 | 0 | T | C | 100.0%
| 760.4
/ NA
| 217 | I257I (ATT→ATC) | ftsA | ATP‑binding cell division protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (123/94); total (123/94) |
Only 100 of 221 total aligned reads displayed.
CCACACTAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATTAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCACGGAG > NC_000913/104662‑104841
|
ccACACTAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCaa > 1:1616874/1‑93 (MQ=255)
acacTAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAg < 1:2839598/93‑1 (MQ=255)
cacTAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGt > 2:1398008/1‑93 (MQ=255)
cacTAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGt > 2:4094684/1‑93 (MQ=255)
acTAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGtt > 1:3094111/1‑93 (MQ=255)
acTAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGtc > 1:5231555/1‑92 (MQ=255)
cTAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTc > 1:4234501/1‑93 (MQ=255)
cTAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTc > 1:846985/1‑93 (MQ=255)
tAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCg > 2:3001178/1‑93 (MQ=255)
tAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCg < 2:3583660/93‑1 (MQ=255)
aaGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGc > 1:3525406/1‑93 (MQ=255)
aaGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGc > 2:3687266/1‑93 (MQ=255)
aGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCGCGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGcc > 1:3980136/1‑93 (MQ=255)
aGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGcc > 2:3465560/1‑93 (MQ=255)
aGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGcc > 2:6195878/1‑93 (MQ=255)
aGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATAGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCgac > 2:567005/1‑91 (MQ=255)
ggTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCa < 1:6367954/93‑1 (MQ=255)
gTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCAc > 1:1564045/1‑93 (MQ=255)
tAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGTGACGCCGAAGCGATCAAAGTTCTCCACg > 2:774721/1‑93 (MQ=255)
tAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACg > 2:5999795/1‑93 (MQ=255)
aaTTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACgg > 2:2719881/1‑93 (MQ=255)
ttCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGtt > 2:5938491/1‑93 (MQ=255)
tCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTtg < 2:2244031/93‑1 (MQ=255)
ccTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTtgt < 2:604550/93‑1 (MQ=255)
ccTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTtgt < 2:839490/93‑1 (MQ=255)
cTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTtgtg < 1:4897383/93‑1 (MQ=255)
cTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTtgtg > 2:1688418/1‑93 (MQ=255)
ttATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTgc > 2:885258/1‑93 (MQ=255)
ttATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTgc > 1:910197/1‑93 (MQ=255)
aTGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTgcgc < 2:948238/93‑1 (MQ=255)
aTGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTgcgc > 2:4064169/1‑93 (MQ=255)
aTGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTgcgc < 1:3082546/93‑1 (MQ=255)
tGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCt > 2:6198799/1‑93 (MQ=255)
tGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCt > 1:1923678/1‑93 (MQ=255)
cTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTgg > 2:5226462/1‑93 (MQ=255)
cTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTgg < 1:4082544/93‑1 (MQ=255)
ggCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGt < 1:158436/93‑1 (MQ=255)
aTGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCa > 2:5494235/1‑93 (MQ=255)
tGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCAt < 1:5970228/93‑1 (MQ=255)
gTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATc < 1:299501/93‑1 (MQ=255)
tCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCg < 1:3574535/93‑1 (MQ=255)
tCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCg > 2:5749396/1‑93 (MQ=255)
cGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGt < 2:1921220/93‑1 (MQ=255)
cGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGt < 1:1036913/93‑1 (MQ=255)
gACCAGTAATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTgg < 2:2322945/93‑1 (MQ=255)
aCCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGa > 1:5840637/1‑93 (MQ=255)
aCCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGa > 1:2349653/1‑93 (MQ=255)
cAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGaaa > 1:3415205/1‑93 (MQ=255)
aGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGaaaa > 2:2879114/1‑93 (MQ=255)
gTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAg < 2:423904/93‑1 (MQ=255)
tGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGa > 2:1151936/1‑93 (MQ=255)
gATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCTCCACGGTAGTGCGCTGGGGTCCATCGTTGGagaagag > 1:2041285/1‑92 (MQ=255)
gATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGAt > 1:4857678/1‑93 (MQ=255)
atatCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATg < 1:5867787/93‑1 (MQ=255)
tatCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATga < 2:1419001/93‑1 (MQ=255)
atCGCTTACGCCTTTGTCACGCCACCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATgag < 1:4217714/93‑1 (MQ=255)
atCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATgag < 1:2243976/93‑1 (MQ=255)
tCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATgaga > 1:3111132/1‑93 (MQ=255)
tCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATgaga < 2:403063/93‑1 (MQ=255)
tCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATgaga < 2:3875798/93‑1 (MQ=255)
tCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTAGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATgaga < 1:4554181/93‑1 (MQ=255)
gCTTACGCCTTTGGCACGCCGCCAAGCGACTCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGc < 2:4781339/93‑1 (MQ=255)
cTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCg < 1:2183917/93‑1 (MQ=255)
tACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTg > 2:1623986/1‑93 (MQ=255)
tACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTg > 2:4918601/1‑93 (MQ=255)
cGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGa > 2:4492025/1‑93 (MQ=255)
gCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGaa < 1:4392265/93‑1 (MQ=255)
ccTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAg > 2:5015794/1‑93 (MQ=255)
cTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAgg > 2:6380350/1‑92 (MQ=255)
cTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGt > 1:1434830/1‑93 (MQ=255)
tttGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTg > 1:2154875/1‑93 (MQ=255)
tttGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTg > 2:4702888/1‑93 (MQ=255)
ggCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCg > 1:4594826/1‑93 (MQ=255)
cgccgcCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCg < 1:2793500/93‑1 (MQ=255)
cgccgcCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCg < 1:1530918/93‑1 (MQ=255)
cgccgcCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCg < 2:1258172/93‑1 (MQ=255)
gccAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAgg < 1:1114700/93‑1 (MQ=255)
gccAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAgg < 1:3027054/93‑1 (MQ=255)
ccAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAggt < 1:6320333/93‑1 (MQ=255)
ccAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAggt < 1:16691/93‑1 (MQ=255)
ccAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAggt > 1:5667575/1‑93 (MQ=255)
ccAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAggt < 1:6025234/93‑1 (MQ=255)
ccAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAggt < 2:3616031/93‑1 (MQ=255)
ccAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAggt > 2:2825619/1‑93 (MQ=255)
cAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAggtg > 1:5932660/1‑93 (MQ=255)
aaGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAggtgg < 2:5363116/93‑1 (MQ=255)
aaGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGGTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAggtgg > 1:1391393/1‑93 (MQ=255)
gCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAggtggtg > 2:3105246/1‑92 (MQ=255)
gCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGgtc > 2:6080245/1‑93 (MQ=255)
aCGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGgtcgtc > 2:4738038/1‑93 (MQ=255)
aCGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGgtcgtc > 2:5846029/1‑93 (MQ=255)
aCGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGgtcgtc < 1:3807288/93‑1 (MQ=255)
cGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTcc > 1:2538119/1‑93 (MQ=255)
cGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTcc < 2:1435619/93‑1 (MQ=255)
gCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCg < 1:2920726/93‑1 (MQ=255)
gAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCa > 1:4870789/1‑93 (MQ=255)
gAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCa > 1:4724998/1‑93 (MQ=255)
gAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCa > 2:2407509/1‑93 (MQ=255)
aaGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCAc > 1:724912/1‑93 (MQ=255)
gCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCACgg < 2:3330706/93‑1 (MQ=255)
|
CCACACTAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATTAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCACGGAG > NC_000913/104662‑104841
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCCACACTAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATTAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCACGGAGTCTG > NC_000913/104660‑104845
|
CGCCACACTAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCA > SRR4302537.4367357/1‑94 (MQ=60)
GCCACACTAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAA > SRR4302537.1628167/1‑94 (MQ=60)
CACACTAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAG > SRR4302537.2903938/1‑94 (MQ=60)
ACACTAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGT < SRR4302537.2859471/94‑1 (MQ=60)
CACTAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTT > SRR4302537.3115695/1‑94 (MQ=60)
CACTAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTC > SRR4302537.5267536/1‑94 (MQ=60)
ACTAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTC > SRR4302537.4263966/1‑94 (MQ=60)
ACTAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTC > SRR4302537.852785/1‑94 (MQ=60)
ACTAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTC > SRR4302537.3221240/1‑94 (MQ=60)
CTAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCG < SRR4302537.270262/94‑1 (MQ=60)
CTAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCG > SRR4302537.2401970/1‑94 (MQ=60)
TAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGC > SRR4302537.3550344/1‑94 (MQ=60)
TAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGC > SRR4302537.5610931/1‑94 (MQ=60)
AAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCGCGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCC > SRR4302537.4007994/1‑94 (MQ=60)
GGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCAC > SRR4302537.1574954/1‑94 (MQ=60)
GGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCAC < SRR4302537.6411385/94‑1 (MQ=60)
TAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGG > SRR4302537.3165213/1‑94 (MQ=60)
AATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGT > SRR4302537.6005377/1‑94 (MQ=60)
ATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTT < SRR4302537.750652/94‑1 (MQ=60)
TTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTG < SRR4302537.854778/94‑1 (MQ=60)
CCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTG > SRR4302537.4287599/1‑94 (MQ=60)
CCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTG > SRR4302537.2108846/1‑94 (MQ=60)
CTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGC > SRR4302537.916479/1‑94 (MQ=60)
CTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGC < SRR4302537.4931192/94‑1 (MQ=60)
TTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCG < SRR4302537.2441622/94‑1 (MQ=60)
TATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGACGCGATCAAAGTTCGCCACGGTTGTGCGC > SRR4302537.388867/1‑94 (MQ=60)
ATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCT > SRR4302537.1937032/1‑94 (MQ=60)
ATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCT < SRR4302537.3104016/94‑1 (MQ=60)
TGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTG < SRR4302537.3707570/94‑1 (MQ=60)
CTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGG < SRR4302537.4111044/94‑1 (MQ=60)
CTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGG > SRR4302537.4517629/1‑94 (MQ=60)
CTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGG < SRR4302537.4926527/94‑1 (MQ=60)
GGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTT < SRR4302537.159562/94‑1 (MQ=60)
GGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTT > SRR4302537.3091925/1‑94 (MQ=60)
CAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCC > SRR4302537.460248/1‑94 (MQ=60)
TGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATC < SRR4302537.2967970/94‑1 (MQ=60)
TGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATC < SRR4302537.6011206/94‑1 (MQ=60)
GTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCG < SRR4302537.301590/94‑1 (MQ=60)
TCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGT < SRR4302537.3599745/94‑1 (MQ=60)
CGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCGACGGTTGTGCGCTGGGTTCCATCGTT < SRR4302537.6016497/94‑1 (MQ=60)
CGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTT < SRR4302537.5257588/94‑1 (MQ=60)
CGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTT < SRR4302537.1044053/94‑1 (MQ=60)
GTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTG < SRR4302537.3045437/94‑1 (MQ=60)
TGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGG > SRR4302537.1862915/1‑94 (MQ=60)
TGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGG > SRR4302537.4071492/1‑94 (MQ=60)
GACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGA > SRR4302537.5880686/1‑94 (MQ=60)
GACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGA > SRR4302537.2366199/1‑94 (MQ=60)
GACCAGTGATATCGCTTACGCCTTTGGCACACCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGA > SRR4302537.164535/1‑94 (MQ=60)
ACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAA > SRR4302537.2305353/1‑94 (MQ=60)
CCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAA > SRR4302537.3439387/1‑94 (MQ=60)
TGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCTCCACGGTAGTGCGCTGGGGTCCATCGTTGGAGAAGAG > SRR4302537.2055545/1‑94 (MQ=60)
TGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGAT > SRR4302537.4891194/1‑94 (MQ=60)
TGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGAT > SRR4302537.3524644/1‑94 (MQ=60)
ATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGA < SRR4302537.2019018/94‑1 (MQ=60)
ATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGA < SRR4302537.5908042/94‑1 (MQ=60)
TATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAG < SRR4302537.1441958/94‑1 (MQ=60)
TATCGCTGACGACTTGGGCACGCCGCCAATCGACGCCGAAGCGAGCAAAGTTCGCCGCGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAG < SRR4302537.3953623/94‑1 (MQ=60)
ATCGCTTACGCCTTTGTCACGCCACCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGA < SRR4302537.4247114/94‑1 (MQ=60)
ATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGA > SRR4302537.3132859/1‑94 (MQ=60)
ATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGA < SRR4302537.2259803/94‑1 (MQ=60)
TCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAG > SRR4302537.5936925/1‑94 (MQ=60)
TCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTAGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAG < SRR4302537.4585694/94‑1 (MQ=60)
CGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGC < SRR4302537.222599/94‑1 (MQ=60)
GCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCG < SRR4302537.1108454/94‑1 (MQ=60)
GCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCG < SRR4302537.6471441/94‑1 (MQ=60)
CTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGT < SRR4302537.2199307/94‑1 (MQ=60)
CTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGT > SRR4302537.1212194/1‑94 (MQ=60)
ACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGA < SRR4302537.3576270/94‑1 (MQ=60)
GCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAG < SRR4302537.4422571/94‑1 (MQ=60)
CCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGGGGAAG < SRR4302537.489492/94‑1 (MQ=60)
CCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGT > SRR4302537.1444809/1‑94 (MQ=60)
CCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGCTCCATCGTTGGAAAAGATGAGAGCGTGGAAGT > SRR4302537.3125735/1‑94 (MQ=60)
CTTTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTG > SRR4302537.2170064/1‑94 (MQ=60)
TTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCC < SRR4302537.1573147/94‑1 (MQ=60)
TTGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCC < SRR4302537.5942691/94‑1 (MQ=60)
TGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCG < SRR4302537.400795/94‑1 (MQ=60)
TGGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCG > SRR4302537.4626605/1‑94 (MQ=60)
GGCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGA < SRR4302537.1622867/94‑1 (MQ=60)
GCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAG < SRR4302537.1590708/94‑1 (MQ=60)
GCACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAG < SRR4302537.4834944/94‑1 (MQ=60)
ACGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGCTGTGCGCTGGGGTCCATCGTTGGAAGAGATGAGAGCGTGGAAGTGCCGAGCG > SRR4302537.6384637/1‑94 (MQ=60)
CGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGT < SRR4302537.1541616/94‑1 (MQ=60)
CGCCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGT < SRR4302537.2813025/94‑1 (MQ=60)
CCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAG < SRR4302537.4667649/94‑1 (MQ=60)
CCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAG < SRR4302537.589040/94‑1 (MQ=60)
CCGCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAG < SRR4302537.5744037/94‑1 (MQ=60)
GCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGT < SRR4302537.1122395/94‑1 (MQ=60)
GCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGT < SRR4302537.3048158/94‑1 (MQ=60)
GCCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGT > SRR4302537.5706356/1‑94 (MQ=60)
CCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTG < SRR4302537.6066635/94‑1 (MQ=60)
CCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTG < SRR4302537.16826/94‑1 (MQ=60)
CCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTG > SRR4302537.3043454/1‑94 (MQ=60)
CCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTG > SRR4302537.5973371/1‑94 (MQ=60)
CCAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTG < SRR4302537.6363578/94‑1 (MQ=60)
CAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGG > SRR4302537.2030504/1‑94 (MQ=60)
CAAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGGTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGG > SRR4302537.1401096/1‑94 (MQ=60)
AAGCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGT > SRR4302537.4262556/1‑94 (MQ=60)
GCGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCG > SRR4302537.1529846/1‑94 (MQ=60)
CGACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGT > SRR4302537.5231061/1‑94 (MQ=60)
ACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCC < SRR4302537.3833981/94‑1 (MQ=60)
ACGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCC > SRR4302537.2555924/1‑94 (MQ=60)
CGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCG < SRR4302537.1543413/94‑1 (MQ=60)
CGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCG < SRR4302537.6212018/94‑1 (MQ=60)
CGCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTCGGCTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGCGGTCGTCCG > SRR4302537.680322/1‑94 (MQ=60)
GCCGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGC < SRR4302537.2941251/94‑1 (MQ=60)
CGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCA > SRR4302537.4904409/1‑94 (MQ=60)
CGAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCA > SRR4302537.4757658/1‑94 (MQ=60)
GAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGGGCGTAGGTGGTCGTCCGCCAC < SRR4302537.2839777/94‑1 (MQ=60)
GAAGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCAC > SRR4302537.729860/1‑94 (MQ=60)
AGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCACGG > SRR4302537.2198187/1‑94 (MQ=60)
AGCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCACGG < SRR4302537.6489294/94‑1 (MQ=60)
GCGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCACGGA < SRR4302537.4193899/94‑1 (MQ=60)
CGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCACGGAG > SRR4302537.3108159/1‑94 (MQ=60)
CGATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCACGGAG > SRR4302537.4624003/1‑94 (MQ=60)
GATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCACGGAGT > SRR4302537.3744673/1‑94 (MQ=60)
GATCAAAGTTAGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCACGGAGT > SRR4302537.27105/1‑94 (MQ=60)
ATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCACGGAGct > SRR4302537.4754673/1‑92 (MQ=60)
ATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCACGGAGTC < SRR4302537.2623075/94‑1 (MQ=60)
ATCAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCACGGAGTC > SRR4302537.2066935/1‑94 (MQ=60)
CAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCACGGAGTCTG < SRR4302537.5196574/94‑1 (MQ=60)
CAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCACGGAGTCTG < SRR4302537.799834/94‑1 (MQ=60)
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CGCCACACTAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATTAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCACGGAGTCTG > NC_000913/104660‑104845
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
