Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
130,705 |
C→T |
G186S (GGC→AGC) |
yacH ← |
putative membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 130,705 | 0 | C | T | 100.0%
| 845.2
/ NA
| 233 | G186S (GGC→AGC) | yacH | putative membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (133/100); total (133/100) |
Only 100 of 235 total aligned reads displayed.
GTATGACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCCGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGTTTTGCACCC > NC_000913/130615‑130794
|
gTATGACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTgg > 1:4258992/1‑93 (MQ=255)
gTATGACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTgg > 2:3065988/1‑93 (MQ=255)
tATGACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGt > 1:5782860/1‑93 (MQ=255)
aTGACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGtt < 2:4246674/93‑1 (MQ=255)
tGACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGttt > 2:5048367/1‑93 (MQ=255)
tGACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGttt < 1:2291251/93‑1 (MQ=255)
aCGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTttgt < 2:1743497/93‑1 (MQ=255)
aCGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTttgt < 1:2390172/93‑1 (MQ=255)
aCGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTttgt < 1:5716836/93‑1 (MQ=255)
aCGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCCGTTCGGTTGATGACTTCAGCGAGCTGGTttgt > 1:5567775/1‑93 (MQ=255)
cGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTttgtt < 1:5277844/93‑1 (MQ=255)
gggTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTttgttg < 1:660590/93‑1 (MQ=255)
ggTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTgc < 1:2791415/93‑1 (MQ=255)
ggTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTgc < 2:101869/93‑1 (MQ=255)
ccGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCa < 1:6458525/93‑1 (MQ=255)
ccGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCa > 2:20780/1‑93 (MQ=255)
gTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGt < 1:5862612/93‑1 (MQ=255)
gTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGt > 2:4606152/1‑93 (MQ=255)
gTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGt < 1:4627387/93‑1 (MQ=255)
gTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGt < 1:1613605/93‑1 (MQ=255)
tGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGtt > 2:4177263/1‑93 (MQ=255)
tGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGtt > 1:2717489/1‑93 (MQ=255)
gACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTg > 1:3998241/1‑93 (MQ=255)
gACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTg > 1:3587413/1‑93 (MQ=255)
ctgtctgtTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGcc > 1:5453720/1‑93 (MQ=255)
gtctgtTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGc > 1:1529914/1‑93 (MQ=255)
tctgtTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCa > 1:4761131/1‑93 (MQ=255)
tgtTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAAt < 1:1041502/93‑1 (MQ=255)
tgtTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAAt > 2:6419598/1‑93 (MQ=255)
gtTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATc < 2:2695936/93‑1 (MQ=255)
gtTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATc < 2:2033509/93‑1 (MQ=255)
gtTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATc < 1:2633969/93‑1 (MQ=255)
ttttACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCg > 1:4872088/1‑93 (MQ=255)
ttttACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCg > 1:5075227/1‑93 (MQ=255)
ttACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCt > 1:4234116/1‑93 (MQ=255)
tACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTg < 1:3196999/93‑1 (MQ=255)
tACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTg > 1:4036896/1‑93 (MQ=255)
aCCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGt < 1:6070637/93‑1 (MQ=255)
cGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTAc < 2:5074488/93‑1 (MQ=255)
cGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTAc < 2:1707925/93‑1 (MQ=255)
gTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCg > 2:1848517/1‑93 (MQ=255)
tACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGa < 1:3769105/93‑1 (MQ=255)
aCAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAg > 1:6410396/1‑93 (MQ=255)
aCAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAg > 1:910273/1‑93 (MQ=255)
cAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGt > 1:6031566/1‑93 (MQ=255)
cAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGt < 1:5355715/93‑1 (MQ=255)
gCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCCGTTGCCGCAATCGCTGTACCGAGTcc > 2:5216938/1‑93 (MQ=255)
gCTTTCTTCGTTGTGGTAAAAACTTTCTGTTCGGTTGATGACTTCAGCGACCTGGTTTGTTGCGCCAGTTGCTGCAATCGCTGTCCCGAGTca > 2:6322014/1‑92 (MQ=255)
cTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCa > 2:335914/1‑93 (MQ=255)
cttcGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCAc < 1:4070232/93‑1 (MQ=255)
ttcGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACg > 1:625989/1‑93 (MQ=255)
ttcGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACg > 2:3005295/1‑93 (MQ=255)
tcGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGt < 2:1549893/93‑1 (MQ=255)
tcGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGt < 2:3834829/93‑1 (MQ=255)
cGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTc > 1:4338031/1‑93 (MQ=255)
gTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTcc > 2:4462894/1‑93 (MQ=255)
ttGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCt > 2:3498673/1‑93 (MQ=255)
ttGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCt > 2:2429239/1‑93 (MQ=255)
ttGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCt < 2:5451674/93‑1 (MQ=255)
gtgGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGc > 2:3847666/1‑93 (MQ=255)
tgGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCg < 1:2010817/93‑1 (MQ=255)
ggTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGccg > 2:2857981/1‑91 (MQ=255)
gTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGc < 2:697680/93‑1 (MQ=255)
aataaCTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTg > 2:1481342/1‑93 (MQ=255)
ataaCTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTgg > 1:4998681/1‑93 (MQ=255)
ataaCTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTgg < 2:2136540/93‑1 (MQ=255)
aaCTTTCTGTTCGGTCGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTACCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGc < 1:4559925/93‑1 (MQ=255)
aCTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGcc > 2:2398963/1‑93 (MQ=255)
aCTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGcc < 1:1818738/93‑1 (MQ=255)
cTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCa < 2:4366744/93‑1 (MQ=255)
cTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCa > 1:112815/1‑93 (MQ=255)
tttCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAg > 2:1877380/1‑93 (MQ=255)
tttCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAg > 1:1283229/1‑93 (MQ=255)
tttCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAg > 2:481264/1‑93 (MQ=255)
ttCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGa > 1:4482393/1‑93 (MQ=255)
tCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGaa > 2:5884560/1‑93 (MQ=255)
ttCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGc < 2:347226/93‑1 (MQ=255)
ttCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGc < 2:2815419/93‑1 (MQ=255)
tCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCa > 1:3447729/1‑93 (MQ=255)
tggTTGATGAGTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCAt < 2:1282959/92‑1 (MQ=255)
cGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCAt < 1:4478040/93‑1 (MQ=255)
ggTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATc > 2:315311/1‑93 (MQ=255)
ggTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATc < 1:223315/93‑1 (MQ=255)
ttGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGc > 2:1596161/1‑93 (MQ=255)
ttGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGc < 2:6038005/93‑1 (MQ=255)
ttGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGc > 2:5284746/1‑93 (MQ=255)
ttGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGACTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGc > 1:4858022/1‑93 (MQ=255)
atgaCTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCa > 1:940330/1‑93 (MQ=255)
gaCTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAgg < 1:5931586/93‑1 (MQ=255)
cTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAgggt > 1:5039027/1‑91 (MQ=255)
ttCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGttt < 1:4409191/93‑1 (MQ=255)
ttCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGttt > 2:5406885/1‑93 (MQ=255)
ttCAGCGAGCTGGGTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGGCCTGCGGCTGGGCCAGAAAAGAATCGCCCAGGttt > 1:132458/1‑93 (MQ=255)
tCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCCGAAAAGCATCGCCCAGGtttt > 2:823900/1‑93 (MQ=255)
cAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGTTTTg < 2:1139190/93‑1 (MQ=255)
aGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGTTTTGc > 2:4154973/1‑93 (MQ=255)
aGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGTTTTGc < 1:1732722/93‑1 (MQ=255)
gAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGTTTTGCAcc > 2:568026/1‑93 (MQ=255)
gAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGACCATCACGTCCTGCGGCTGGGGCAGCAAAGCATCGGCCAGGTGTTGCAcc > 1:4619459/1‑93 (MQ=255)
aGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGTTTTGCAccc > 1:3323067/1‑93 (MQ=255)
|
GTATGACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCCGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGTTTTGCACCC > NC_000913/130615‑130794
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATGGTATGACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCCGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGTTTTGCACCCATTG > NC_000913/130612‑130798
|
ATGGTATGACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCT < SRR4302537.1849407/94‑1 (MQ=60)
ATGGTATGACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCT < SRR4302537.5753383/94‑1 (MQ=60)
TGGTATGACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTG < SRR4302537.4325925/94‑1 (MQ=60)
TGGTATGACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTG < SRR4302537.185969/94‑1 (MQ=60)
TGGTATGACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTG > SRR4302537.6385272/1‑94 (MQ=60)
TGGTATGACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTG > SRR4302537.6357880/1‑94 (MQ=60)
GGTATGACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGG > SRR4302537.4288590/1‑94 (MQ=60)
GTATGACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGT > SRR4302537.1292798/1‑94 (MQ=60)
GTATGACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGT > SRR4302537.5822498/1‑94 (MQ=60)
ATGACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTT > SRR4302537.466941/1‑94 (MQ=60)
ATGACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTT < SRR4302537.54196/94‑1 (MQ=60)
TGACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTG < SRR4302537.2307429/94‑1 (MQ=60)
GACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGT > SRR4302537.6335859/1‑94 (MQ=60)
GACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCCGTTCGGTTGATGACTTCAGCGAGCTGGTTTGT > SRR4302537.5605830/1‑94 (MQ=60)
ACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTT < SRR4302537.5087493/94‑1 (MQ=60)
ACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTT < SRR4302537.5755959/94‑1 (MQ=60)
ACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTT < SRR4302537.2407004/94‑1 (MQ=60)
CGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTG < SRR4302537.5314158/94‑1 (MQ=60)
CGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTG < SRR4302537.442049/94‑1 (MQ=60)
GGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGC < SRR4302537.665089/94‑1 (MQ=60)
GGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCG < SRR4302537.6420320/94‑1 (MQ=60)
GGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCG < SRR4302537.2810926/94‑1 (MQ=60)
CCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAG < SRR4302537.6502294/94‑1 (MQ=60)
GTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTT < SRR4302537.1624881/94‑1 (MQ=60)
GTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTT < SRR4302537.5902816/94‑1 (MQ=60)
GTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTT < SRR4302537.4659406/94‑1 (MQ=60)
GTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTT > SRR4302537.2736468/1‑94 (MQ=60)
TGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTG > SRR4302537.3612705/1‑94 (MQ=60)
TGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTG > SRR4302537.4026236/1‑94 (MQ=60)
TGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTG < SRR4302537.6049110/94‑1 (MQ=60)
TGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTG < SRR4302537.6510695/94‑1 (MQ=60)
TACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGC < SRR4302537.3801172/94‑1 (MQ=60)
ACTGTCTGTTTTACCGGTACAGCTTTGTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCC < SRR4302537.4472823/94‑1 (MQ=60)
ACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCC > SRR4302537.5490922/1‑94 (MQ=60)
CTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCG > SRR4302537.3111246/1‑94 (MQ=60)
TGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGC > SRR4302537.5667188/1‑94 (MQ=60)
TGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGC > SRR4302537.1540605/1‑94 (MQ=60)
GTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCA > SRR4302537.3124128/1‑94 (MQ=60)
GTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCA > SRR4302537.4794019/1‑94 (MQ=60)
TCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAA > SRR4302537.4183887/1‑94 (MQ=60)
CTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAAT < SRR4302537.5299334/94‑1 (MQ=60)
CTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAAT < SRR4302537.3502171/94‑1 (MQ=60)
TGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATC < SRR4302537.1122938/94‑1 (MQ=60)
TGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATC < SRR4302537.1048695/94‑1 (MQ=60)
GTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCG > SRR4302537.4905715/1‑94 (MQ=60)
GTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCG < SRR4302537.1719090/94‑1 (MQ=60)
GTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCG < SRR4302537.2652401/94‑1 (MQ=60)
GTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCG > SRR4302537.5110167/1‑94 (MQ=60)
TTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGC > SRR4302537.5376858/1‑94 (MQ=60)
TTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCT > SRR4302537.4263581/1‑94 (MQ=60)
TTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCT < SRR4302537.1670501/94‑1 (MQ=60)
TTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTG > SRR4302537.4065145/1‑94 (MQ=60)
TACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGT < SRR4302537.3219481/94‑1 (MQ=60)
CCCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTA < SRR4302537.4692090/94‑1 (MQ=60)
ACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTA < SRR4302537.6112346/94‑1 (MQ=60)
ACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTA > SRR4302537.5799881/1‑94 (MQ=60)
CGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACC > SRR4302537.2658663/1‑94 (MQ=60)
CGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACC < SRR4302537.4537255/94‑1 (MQ=60)
TACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAG > SRR4302537.6454012/1‑94 (MQ=60)
TACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAG < SRR4302537.3795568/94‑1 (MQ=60)
TACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAG > SRR4302537.916556/1‑94 (MQ=60)
ACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGT > SRR4302537.6073009/1‑94 (MQ=60)
CAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTC < SRR4302537.5392399/94‑1 (MQ=60)
AGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCC > SRR4302537.4017435/1‑94 (MQ=60)
CTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTTGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCAT > SRR4302537.5755991/1‑94 (MQ=60)
CTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCAT < SRR4302537.3266655/94‑1 (MQ=60)
CTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCAT > SRR4302537.4089759/1‑94 (MQ=60)
CTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACG > SRR4302537.630255/1‑94 (MQ=60)
CTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACG < SRR4302537.4098658/94‑1 (MQ=60)
TTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGT < SRR4302537.6302393/94‑1 (MQ=60)
TCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTC > SRR4302537.4368140/1‑94 (MQ=60)
CGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCC > SRR4302537.2138238/1‑94 (MQ=60)
CGTTGGTGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAAGCGCTGTACCGAGTCCATCACGTCC < SRR4302537.5373758/94‑1 (MQ=60)
GTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCT > SRR4302537.3591848/1‑94 (MQ=60)
GTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGCTGAGCCAGTTGCCGCAATCGCTGTACCGAGGCCATCACGTCCT > SRR4302537.898761/1‑94 (MQ=60)
TTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTTTACCGAGTCCATCACGTCCTG > SRR4302537.4976364/1‑94 (MQ=60)
TGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGC < SRR4302537.1825963/94‑1 (MQ=60)
TGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGC > SRR4302537.280734/1‑94 (MQ=60)
TGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGC < SRR4302537.4274067/94‑1 (MQ=60)
GTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCG < SRR4302537.1864361/94‑1 (MQ=60)
TGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGG < SRR4302537.2024832/94‑1 (MQ=60)
GTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCT < SRR4302537.6499969/94‑1 (MQ=60)
TAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTG < SRR4302537.125588/94‑1 (MQ=60)
TAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTG > SRR4302537.4057274/1‑94 (MQ=60)
AATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGG > SRR4302537.5033126/1‑94 (MQ=60)
AACTTTCTGTTCGGTCGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTACCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCC < SRR4302537.4591486/94‑1 (MQ=60)
ACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCA < SRR4302537.1831412/94‑1 (MQ=60)
ACTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCA > SRR4302537.113638/1‑94 (MQ=60)
CTTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAG > SRR4302537.1292149/1‑94 (MQ=60)
TTTCTGTTCGGTTGATGACTTCAGCTAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGA > SRR4302537.2379830/1‑94 (MQ=60)
TTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGA > SRR4302537.939807/1‑94 (MQ=60)
TTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGA > SRR4302537.4513400/1‑94 (MQ=60)
TTTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGA > SRR4302537.2518025/1‑94 (MQ=60)
TTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAA < SRR4302537.4652085/94‑1 (MQ=60)
TTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAA < SRR4302537.5964455/94‑1 (MQ=60)
TTCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCCGCTGGGCCAGGA > SRR4302537.686539/1‑94 (MQ=60)
TCTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAA > SRR4302537.4430567/1‑94 (MQ=60)
CTGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAA > SRR4302537.4586262/1‑94 (MQ=60)
TGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAG > SRR4302537.4990357/1‑94 (MQ=60)
TGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAG > SRR4302537.5854731/1‑94 (MQ=60)
TGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAG < SRR4302537.4616997/94‑1 (MQ=60)
TGTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAG < SRR4302537.5053156/94‑1 (MQ=60)
GTTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGC < SRR4302537.2130016/94‑1 (MQ=60)
GTTCGGTTGATGACTTCAGCGAGCTGGGTTGTTGCGCCAGATGCCTCAATCGCTGTTCCGATTCCATCACGGCCTGCGGCTGGGCCAGAAAAGC < SRR4302537.1265026/94‑1 (MQ=60)
TTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCA < SRR4302537.1543787/94‑1 (MQ=60)
TTCGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCA > SRR4302537.3472117/1‑94 (MQ=60)
CGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGGCAGAAAAGCATC > SRR4302537.2293001/1‑94 (MQ=60)
CGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATC < SRR4302537.4509017/94‑1 (MQ=60)
CGGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGATGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATC > SRR4302537.4905224/1‑94 (MQ=60)
GGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCG < SRR4302537.5165763/94‑1 (MQ=60)
GGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCG < SRR4302537.224906/94‑1 (MQ=60)
GGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCG > SRR4302537.4511410/1‑94 (MQ=60)
GGTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCG < SRR4302537.6045511/94‑1 (MQ=60)
GTTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGACTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGC > SRR4302537.4891541/1‑94 (MQ=60)
TTGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCC > SRR4302537.2612049/1‑94 (MQ=60)
TGATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCC > SRR4302537.4331747/1‑94 (MQ=60)
GATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCA < SRR4302537.6086172/94‑1 (MQ=60)
GATGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCA > SRR4302537.946815/1‑94 (MQ=60)
TGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGG < SRR4302537.3427931/94‑1 (MQ=60)
TGACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGG < SRR4302537.5566386/94‑1 (MQ=60)
GACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGT < SRR4302537.5972282/94‑1 (MQ=60)
ACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGTT > SRR4302537.4832238/1‑94 (MQ=60)
ACTTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGGT > SRR4302537.5073718/1‑94 (MQ=60)
CTTCAGCGAGCTGGGTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGGCCTGCGGCTGGGCCAGAAAAGAATCGCCCAGGTTT > SRR4302537.133397/1‑94 (MQ=60)
TTCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGTTTT < SRR4302537.4439616/94‑1 (MQ=60)
TCAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGTTTTG < SRR4302537.3775849/94‑1 (MQ=60)
CAGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGTTTTGC > SRR4302537.5408470/1‑94 (MQ=60)
AGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGTTTTGCA < SRR4302537.1744814/94‑1 (MQ=60)
AGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGTTTTGCA < SRR4302537.1302954/94‑1 (MQ=60)
AGCGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGTTTTGCA < SRR4302537.4205940/94‑1 (MQ=60)
CGAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGACCATCACGTCCTGCGGCTGGGGCAGCAAAGCATCGGCCAGGTGTTGCACC > SRR4302537.4651446/1‑94 (MQ=60)
GAGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGTTTTGCACCC > SRR4302537.3346577/1‑94 (MQ=60)
AGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGTTTTGCACCCA > SRR4302537.1833002/1‑94 (MQ=60)
AGCTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGGTTTGCACCCA > SRR4302537.4591146/1‑94 (MQ=60)
CTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGTTTTGCACCCATT < SRR4302537.5390327/94‑1 (MQ=60)
CTGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGTTTTGCACCCATT < SRR4302537.4166879/94‑1 (MQ=60)
TGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGTTTTGCACCCATTG < SRR4302537.1509352/94‑1 (MQ=60)
|
ATGGTATGACGGGTGCCGTGACTGTCTGTTTTACCGGTACAGCTTTCTTCGTTGTGGTAATAACTTTCTGTTCGGTTGATGACTTCAGCGAGCCGGTTTGTTGCGCCAGTTGCCGCAATCGCTGTACCGAGTCCATCACGTCCTGCGGCTGGGCCAGAAAAGCATCGCCCAGGTTTTGCACCCATTG > NC_000913/130612‑130798
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
