Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
286,179 |
A→G |
D56G (GAC→GGC) |
yagH → |
putative beta‑xylosidase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 286,179 | 0 | A | G | 100.0%
| 710.9
/ NA
| 207 | D56G (GAC→GGC) | yagH | putative beta‑xylosidase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (108/99); total (108/99) |
Only 100 of 219 total aligned reads displayed.
TCGCCACCTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGACCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAATTCTGGC > NC_000913/286089‑286268
|
tCGCCACCTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGcc < 1:4824154/93‑1 (MQ=255)
tCGCCACCTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGcc < 2:2154060/93‑1 (MQ=255)
ccACCTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCcgcg > 1:4348496/1‑93 (MQ=255)
cACCTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCgt < 2:2549304/93‑1 (MQ=255)
aCCTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCgtg > 2:667946/1‑93 (MQ=255)
aCCTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCgtg > 1:945122/1‑93 (MQ=255)
ccTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCgtgt > 1:3973163/1‑93 (MQ=255)
cTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTTGGCCGCGTGTc > 1:741157/1‑93 (MQ=255)
cTCGACCTTCGAGGGGTTCCAGGGCGAGCGCATCTACCACTAACGAGGCCTTAAAAACTGGCTGCGTGCCAGCGCCCCGTTGGGCcgcgggcg > 2:3561380/1‑89 (MQ=255)
tCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCg > 2:3496240/1‑93 (MQ=255)
gACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGAt < 1:2704480/93‑1 (MQ=255)
aCCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATg > 1:4955045/1‑93 (MQ=255)
cTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCt > 1:2051775/1‑93 (MQ=255)
cTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCt > 2:4538525/1‑93 (MQ=255)
ttCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTg < 2:5563260/93‑1 (MQ=255)
ttCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTg < 2:3053484/93‑1 (MQ=255)
ttCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTg < 1:4876005/93‑1 (MQ=255)
ttCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTg > 1:5852523/1‑93 (MQ=255)
ttCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTg > 1:62310/1‑93 (MQ=255)
cGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGa > 2:6411657/1‑93 (MQ=255)
aGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACa > 1:4726476/1‑93 (MQ=255)
aGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACa < 1:2941232/93‑1 (MQ=255)
gTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACAt > 1:1563256/1‑93 (MQ=255)
ggTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGa < 1:1330786/93‑1 (MQ=255)
ttCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAg > 1:3688700/1‑93 (MQ=255)
ccGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGc > 2:1881615/1‑93 (MQ=255)
ccGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGc < 2:4373118/93‑1 (MQ=255)
ccGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGc < 2:1982987/93‑1 (MQ=255)
gggCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCaa > 2:230563/1‑93 (MQ=255)
gggCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCaa < 1:5659727/93‑1 (MQ=255)
ggCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAAc < 2:3644424/93‑1 (MQ=255)
ggCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAAc > 1:386528/1‑93 (MQ=255)
gCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAAcc > 1:1382507/1‑93 (MQ=255)
cGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAAccc < 2:6476622/93‑1 (MQ=255)
gTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCg < 2:6194066/93‑1 (MQ=255)
gcgcATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGa < 2:2929207/93‑1 (MQ=255)
cATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTc > 1:5508961/1‑93 (MQ=255)
aTCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTcc < 1:2606753/93‑1 (MQ=255)
aTCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTcc > 1:5255908/1‑93 (MQ=255)
aTCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGCCAACCCGGACTcc > 2:3080492/1‑93 (MQ=255)
tccaCCACTCCCGTGACCTGAAACACTGGTCGCTGGTCAGCTCCCCGTTTGGCCGCGTGTCGATGCCGGACATGAAAGGCAACCCGGCCTCcg < 2:1937097/90‑1 (MQ=255)
tCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCcg > 1:4923967/1‑93 (MQ=255)
tCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCcg < 1:4289944/93‑1 (MQ=255)
tCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCcg > 2:3863566/1‑93 (MQ=255)
cTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCcgg > 1:4427985/1‑93 (MQ=255)
cTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCcgg > 2:1732068/1‑93 (MQ=255)
tACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGAGTCGATGCTGGACATGAAGGGTAACCCGGACTCcggc > 1:3311930/1‑93 (MQ=255)
aCCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCcggcg > 2:1089721/1‑93 (MQ=255)
ccACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCcggcgg > 2:2466136/1‑93 (MQ=255)
cACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCggcggc > 2:5163218/1‑93 (MQ=255)
cTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCAt < 2:761029/93‑1 (MQ=255)
tCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATc > 2:3735018/1‑93 (MQ=255)
ccccGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATc < 2:5505682/92‑1 (MQ=255)
cccGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCt > 1:56496/1‑93 (MQ=255)
ccGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTg < 1:1993676/93‑1 (MQ=255)
ccGTGACCTGAAAAACTGGCCCCCGGCCAGCCCCCCGGCACCCCGCGCGCCGCTGCTGGACAGGCCGGCCAACGCGCCCGCCCGCGGCACCTg > 2:5004181/1‑93 (MQ=255)
aCCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGgcgc > 2:1099737/1‑93 (MQ=255)
ccTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGcc > 2:1313930/1‑93 (MQ=255)
ccTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGcc > 2:2753576/1‑93 (MQ=255)
catGAAAATCTGCTCTCTGGTCAGCTCCCGGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCACCCCGGACTCCGGCGGCATCTGGGCGcc < 1:3440812/91‑1 (MQ=255)
cTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCg > 1:3775791/1‑93 (MQ=255)
cTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCg > 1:1609054/1‑93 (MQ=255)
cTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCg < 1:3829545/93‑1 (MQ=255)
tGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGt > 2:4976998/1‑93 (MQ=255)
gAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTg > 1:2131871/1‑93 (MQ=255)
gAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTg < 1:3935580/93‑1 (MQ=255)
aaaaCTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGcc > 2:3948822/1‑93 (MQ=255)
aaaCTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCt < 2:1813347/93‑1 (MQ=255)
aCTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTgg > 1:1154838/1‑92 (MQ=255)
aCTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTgg > 2:28632/1‑92 (MQ=255)
aCTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGa > 1:4643483/1‑93 (MQ=255)
aCTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGa > 2:1749017/1‑93 (MQ=255)
ggTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCt > 1:1902276/1‑93 (MQ=255)
gTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTa < 2:1495057/93‑1 (MQ=255)
tCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCATCCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTAc < 2:5396922/93‑1 (MQ=255)
tCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTAc < 2:5925112/93‑1 (MQ=255)
tCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTAc < 1:3570405/93‑1 (MQ=255)
tCGCGGGTCAGGACCCCGTCGGGCCGCTGGTCGATGCGGGACAGGAAGCGCAACCCGGAGGCCGGCGGCATCTGGGCGCCGTGCCTGAACtgc < 2:3263336/93‑3 (MQ=255)
gCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGc < 2:3143564/93‑1 (MQ=255)
gCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGc < 1:1044540/93‑1 (MQ=255)
cTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAAACCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGcc < 1:3462296/93‑1 (MQ=255)
tGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCg > 2:3833655/1‑93 (MQ=255)
ggTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGa < 2:3797690/93‑1 (MQ=255)
gTCACCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTCCCTGAGCTACGCCGAc < 2:1442485/93‑1 (MQ=255)
aGCGCCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGt < 2:5114273/93‑1 (MQ=255)
gCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACggga > 1:4506393/1‑91 (MQ=255)
gCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTa < 2:2604707/93‑1 (MQ=255)
gCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTa < 1:2434984/93‑1 (MQ=255)
cACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTaa < 2:3286345/93‑1 (MQ=255)
cACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTaa > 1:2290862/1‑93 (MQ=255)
aCCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTaaa > 2:4872981/1‑93 (MQ=255)
cccGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAAtt < 1:6086880/93‑1 (MQ=255)
cccGTTGGGCCGCGGGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAAtt > 2:5298426/1‑93 (MQ=255)
ccGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAATTc > 2:3365893/1‑93 (MQ=255)
ccGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAATTc < 1:1787137/93‑1 (MQ=255)
cGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAATTCt < 1:6425416/93‑1 (MQ=255)
gTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAATTCTg > 2:1707486/1‑93 (MQ=255)
gTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAATTCTg > 2:2116442/1‑93 (MQ=255)
ttGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAATTCTgg > 1:4153035/1‑93 (MQ=255)
tGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAATTCTGgc < 1:3288278/93‑1 (MQ=255)
|
TCGCCACCTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGACCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAATTCTGGC > NC_000913/286089‑286268
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACATCGCCACCTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGACCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAATTCTGGCTGCT > NC_000913/286086‑286272
|
ACATCGCCACCTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGG < SRR4302537.1864106/94‑1 (MQ=60)
ACATCGCCACCTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTACCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGG < SRR4302537.3925900/94‑1 (MQ=60)
CATCGCCACCTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGC > SRR4302537.3072014/1‑94 (MQ=60)
CATCGCCACCTCGACCTTCGAGTGGTTCCCGGGCGTGCCCATCTACCACTCCCGTGACCTGAAAAACTGGCCGCTGGTCAGCACCCCGTTGGGC > SRR4302537.325640/1‑94 (MQ=60)
ATCGCCACCTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCC < SRR4302537.3041987/94‑1 (MQ=60)
ATCGCCACCTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCC > SRR4302537.652537/1‑94 (MQ=60)
TCGCCACCTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCG < SRR4302537.4857475/94‑1 (MQ=60)
GCCACCTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCG > SRR4302537.5955773/1‑94 (MQ=60)
GCCACCTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCG > SRR4302537.4378630/1‑94 (MQ=60)
CACCTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTG > SRR4302537.951657/1‑94 (MQ=60)
ACCTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGT > SRR4302537.4000976/1‑94 (MQ=60)
CCTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTTGGCCGCGTGTC > SRR4302537.746219/1‑94 (MQ=60)
CTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCG < SRR4302537.5688327/94‑1 (MQ=60)
CTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCG > SRR4302537.1978521/1‑94 (MQ=60)
TCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGA < SRR4302537.3994559/94‑1 (MQ=60)
CGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGAT < SRR4302537.1554138/94‑1 (MQ=60)
CGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGAT < SRR4302537.1599921/94‑1 (MQ=60)
GACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATG < SRR4302537.2723360/94‑1 (MQ=60)
GACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATG > SRR4302537.4989210/1‑94 (MQ=60)
CCTTCGAGTGGTTCCTGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCT < SRR4302537.4845386/94‑1 (MQ=60)
CCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCGCCCCGTTGGGCCGCGTGTCGATGCT < SRR4302537.3763322/94‑1 (MQ=60)
CCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCT > SRR4302537.2066168/1‑94 (MQ=60)
CTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTG > SRR4302537.4870444/1‑94 (MQ=60)
CTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTG > SRR4302537.62776/1‑94 (MQ=60)
CTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTG > SRR4302537.5892670/1‑94 (MQ=60)
TTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGG < SRR4302537.4909658/94‑1 (MQ=60)
TCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGA < SRR4302537.3638834/94‑1 (MQ=60)
GAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACA > SRR4302537.4759144/1‑94 (MQ=60)
AGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACAT < SRR4302537.2961881/94‑1 (MQ=60)
AGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACAT > SRR4302537.1574163/1‑94 (MQ=60)
AGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACAT < SRR4302537.3073005/94‑1 (MQ=60)
GGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAA < SRR4302537.1340061/94‑1 (MQ=60)
GTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAG > SRR4302537.3714642/1‑94 (MQ=60)
TCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGG < SRR4302537.596079/94‑1 (MQ=60)
CCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGC > SRR4302537.3206926/1‑94 (MQ=60)
CCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCA < SRR4302537.3861847/94‑1 (MQ=60)
CGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAA > SRR4302537.3777195/1‑94 (MQ=60)
GGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAAC < SRR4302537.5698462/94‑1 (MQ=60)
GGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAAC > SRR4302537.1331188/1‑94 (MQ=60)
GGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAAC > SRR4302537.389200/1‑94 (MQ=60)
GGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACC > SRR4302537.1392154/1‑94 (MQ=60)
GGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACC > SRR4302537.4122626/1‑94 (MQ=60)
GCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCC < SRR4302537.4977659/94‑1 (MQ=60)
TGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGA > SRR4302537.3949357/1‑94 (MQ=60)
GCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGAC > SRR4302537.3812189/1‑94 (MQ=60)
GCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTC > SRR4302537.5546583/1‑94 (MQ=60)
CATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCC > SRR4302537.5292076/1‑94 (MQ=60)
ATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCG > SRR4302537.4957921/1‑94 (MQ=60)
ATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCG < SRR4302537.2624977/94‑1 (MQ=60)
TCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGG > SRR4302537.4458567/1‑94 (MQ=60)
TCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGG < SRR4302537.4319762/94‑1 (MQ=60)
TCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGG < SRR4302537.1669987/94‑1 (MQ=60)
CTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGC > SRR4302537.4981525/1‑94 (MQ=60)
CTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGAGTCGATGCTGGACATGAAGGGTAACCCGGACTCCGGC > SRR4302537.3335361/1‑94 (MQ=60)
ACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGG > SRR4302537.1094318/1‑94 (MQ=60)
CACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCA > SRR4302537.5884546/1‑94 (MQ=60)
CTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGCCGGCATC > SRR4302537.1345562/1‑94 (MQ=60)
TCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCT > SRR4302537.56916/1‑94 (MQ=60)
CCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGG < SRR4302537.2007539/94‑1 (MQ=60)
CGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGG > SRR4302537.4553257/1‑94 (MQ=60)
CGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGG < SRR4302537.2058265/94‑1 (MQ=60)
TGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCG < SRR4302537.2770621/94‑1 (MQ=60)
GACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGC > SRR4302537.1837466/1‑94 (MQ=60)
ACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCC > SRR4302537.2429528/1‑94 (MQ=60)
CCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCG > SRR4302537.1714682/1‑94 (MQ=60)
CCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCG > SRR4302537.1620304/1‑94 (MQ=60)
CCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCG > SRR4302537.3802303/1‑94 (MQ=60)
CATGAAAATCTGCTCTCTGGTCAGCTCCCGGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCACCCCGGACTCCGGCGGCATCTGGGCGCCG < SRR4302537.3465162/94‑1 (MQ=60)
CTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGT < SRR4302537.3856391/94‑1 (MQ=60)
TGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTG > SRR4302537.2146874/1‑94 (MQ=60)
GAAAAACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGC < SRR4302537.3963087/94‑1 (MQ=60)
AACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGG > SRR4302537.1162875/1‑94 (MQ=60)
AACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGA > SRR4302537.4675595/1‑94 (MQ=60)
AACTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGA > SRR4302537.3587473/1‑94 (MQ=60)
CTGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGC < SRR4302537.6361818/94‑1 (MQ=60)
TGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCT > SRR4302537.4926814/1‑94 (MQ=60)
TGGTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCT > SRR4302537.1915490/1‑94 (MQ=60)
GTCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTAC < SRR4302537.4427242/94‑1 (MQ=60)
TCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACG < SRR4302537.3325631/94‑1 (MQ=60)
TCGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACG < SRR4302537.3595580/94‑1 (MQ=60)
CGCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGC > SRR4302537.5040255/1‑94 (MQ=60)
GCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCC < SRR4302537.1051747/94‑1 (MQ=60)
GCTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCC < SRR4302537.821117/94‑1 (MQ=60)
GCTAGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCC < SRR4302537.3459661/94‑1 (MQ=60)
CTGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAAACCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCG < SRR4302537.3486774/94‑1 (MQ=60)
TGGTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGA > SRR4302537.2132228/1‑94 (MQ=60)
GTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACG > SRR4302537.3475614/1‑94 (MQ=60)
GTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACG < SRR4302537.4169358/94‑1 (MQ=60)
GTCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACG < SRR4302537.4186401/94‑1 (MQ=60)
TCAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGG > SRR4302537.2543670/1‑94 (MQ=60)
CAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTTCCTGAGCTACGCCGACGGT < SRR4302537.4725441/94‑1 (MQ=60)
CAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGT < SRR4302537.4353799/94‑1 (MQ=60)
CAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGT < SRR4302537.2176844/94‑1 (MQ=60)
CAGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGT < SRR4302537.2286099/94‑1 (MQ=60)
AGCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGGA > SRR4302537.4537553/1‑94 (MQ=60)
GCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAA < SRR4302537.2452139/94‑1 (MQ=60)
GCACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAA > SRR4302537.2307039/1‑94 (MQ=60)
ACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAAT < SRR4302537.5572612/94‑1 (MQ=60)
ACCCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAAT > SRR4302537.6180445/1‑94 (MQ=60)
CCCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAATTC < SRR4302537.6128697/94‑1 (MQ=60)
CCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAATTCT < SRR4302537.1799628/94‑1 (MQ=60)
CCGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAATTCT > SRR4302537.4473517/1‑94 (MQ=60)
CGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAATTCTG < SRR4302537.5477983/94‑1 (MQ=60)
CGTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAATTCTG < SRR4302537.6469077/94‑1 (MQ=60)
CGTGGGGCCGCGTGTCGATGCTGGACATGAAGGGCATCCCGTGCTCCGGCGGCATCTGCGCGCCGTGCCTGAGCTACGCCGACGGTAAATTCTG < SRR4302537.2577858/94‑1 (MQ=60)
GTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAATTCTGG < SRR4302537.2684391/94‑1 (MQ=60)
GTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAATTCTGG > SRR4302537.4182032/1‑94 (MQ=60)
GTTGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAATTCTGG < SRR4302537.4549534/94‑1 (MQ=60)
TGGGCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAATTCTGGCT < SRR4302537.3311517/94‑1 (MQ=60)
GCCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAATTCTGGCTGCT > SRR4302537.2220880/1‑94 (MQ=60)
|
ACATCGCCACCTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGACCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAATTCTGGCTGCT > NC_000913/286086‑286272
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
