Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
300,714 |
A→G |
L133P (CTG→CCG) |
yagS ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 300,714 | 0 | A | G | 99.5%
| 634.2
/ ‑4.7
| 187 | L133P (CTG→CCG) | yagS | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (87/99); total (87/100) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.55e-01 |
Only 100 of 211 total aligned reads displayed.
CTCGGATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCAGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGT > NC_000913/300624‑300803
|
cTCGGATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCcgggcggg > 1:6243637/1‑93 (MQ=255)
cTCGGATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCcgggcggg < 2:660091/93‑1 (MQ=255)
tCGGATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCgggcgggc < 1:580897/93‑1 (MQ=255)
tCGGATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCgggcgggc > 1:691432/1‑93 (MQ=255)
tCGGATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCgggcgggc > 1:3256943/1‑93 (MQ=255)
tCGGATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCgggcgggc > 2:5223704/1‑93 (MQ=255)
cGGATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGggcgggcg > 2:4703360/1‑93 (MQ=255)
ggATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGgcgc > 1:1294730/1‑93 (MQ=255)
tGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTa > 1:1542295/1‑93 (MQ=255)
gggTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTAt < 2:3297155/93‑1 (MQ=255)
ggTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTAtt > 2:4028081/1‑93 (MQ=255)
gTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTg > 1:1915893/1‑93 (MQ=255)
tGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGc < 1:797865/93‑1 (MQ=255)
gCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAg > 1:594303/1‑93 (MQ=255)
gCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAg < 1:4281833/93‑1 (MQ=255)
cAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAgg < 1:3392085/93‑1 (MQ=255)
aaTGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAggg > 2:2321737/1‑93 (MQ=255)
aaTGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCT‑AAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGc > 2:1377005/1‑93 (MQ=255)
aTGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGc < 1:137670/93‑1 (MQ=255)
tGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCt > 2:5644493/1‑93 (MQ=255)
gCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTg > 1:2574488/1‑93 (MQ=255)
cAGGCTTCGCTTACGCCTACCACCTCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCAGGCGCTTATTGCAGGGCTGa < 1:4348371/93‑1 (MQ=255)
cAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGa < 2:4485924/93‑1 (MQ=255)
cAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGa < 2:5705752/93‑1 (MQ=255)
cAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGa < 2:5051852/93‑1 (MQ=255)
aGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGAt > 1:1996203/1‑93 (MQ=255)
ggCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGAtt > 2:3141992/1‑93 (MQ=255)
ggCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGAtt > 2:5562379/1‑93 (MQ=255)
ggCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGAtt > 2:3445146/1‑93 (MQ=255)
cTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTgg > 2:1452290/1‑93 (MQ=255)
ttCGCTTACTCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGgt < 1:3903060/93‑1 (MQ=255)
ttCCCTTACCCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGgt < 1:1625502/93‑1 (MQ=255)
gCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTc > 2:1653654/1‑93 (MQ=255)
cTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCg < 1:4145267/93‑1 (MQ=255)
tACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTa > 1:5410153/1‑93 (MQ=255)
tACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTa > 1:1437121/1‑93 (MQ=255)
gCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTaaaa > 2:5747723/1‑93 (MQ=255)
ccTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTaaaaa < 2:2060229/93‑1 (MQ=255)
ccTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTaaaaa > 1:5349551/1‑93 (MQ=255)
ccTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTaaaaa < 2:3097464/93‑1 (MQ=255)
tACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATa > 2:871303/1‑93 (MQ=255)
tACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATa > 1:2423726/1‑93 (MQ=255)
accaccGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAg < 2:5512344/93‑1 (MQ=255)
accaccGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAg < 1:2760164/93‑1 (MQ=255)
ccaccGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAgg < 1:3420713/93‑1 (MQ=255)
ccaccGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAgg < 1:5472156/93‑1 (MQ=255)
caccGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAggg < 2:2136570/93‑1 (MQ=255)
accGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAgggg > 1:6317672/1‑93 (MQ=255)
accGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAgggg < 2:2996830/93‑1 (MQ=255)
accGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAgggg < 1:2205655/93‑1 (MQ=255)
accGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAgggg > 2:1806472/1‑93 (MQ=255)
accGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAgggg < 2:4197214/93‑1 (MQ=255)
ccGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGc < 2:6265006/93‑1 (MQ=255)
ccGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGc > 2:2684366/1‑93 (MQ=255)
cgggCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAgc > 2:2558974/4‑93 (MQ=255)
cgTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAgc < 2:3882976/93‑1 (MQ=255)
gTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAgcg < 1:4445265/93‑1 (MQ=255)
tGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAgcgc > 1:3016959/1‑93 (MQ=255)
tGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAgcgc > 1:3905542/1‑93 (MQ=255)
tGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAgcgc > 2:2501802/1‑93 (MQ=255)
gCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGcgcg < 1:3112119/93‑1 (MQ=255)
gCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGcgcg < 2:625053/93‑1 (MQ=255)
gACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTgc > 1:3091685/1‑93 (MQ=255)
gCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTg > 2:6061202/1‑93 (MQ=255)
cTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTgg > 1:1845144/1‑93 (MQ=255)
tAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGa > 1:1675928/1‑93 (MQ=255)
tAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGa < 2:3118545/93‑1 (MQ=255)
aaaGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAg > 1:4081949/1‑93 (MQ=255)
aGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCa > 1:2070190/1‑93 (MQ=255)
ccTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGa < 1:3607874/93‑1 (MQ=255)
ccTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGa > 2:6388527/1‑93 (MQ=255)
cTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGAt < 2:4289660/93‑1 (MQ=255)
ttCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGAtt < 1:5687534/93‑1 (MQ=255)
ttCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGAtt > 1:5606939/1‑93 (MQ=255)
aGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCt < 2:4148393/93‑1 (MQ=255)
aGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCt > 1:3712420/1‑93 (MQ=255)
gcgcCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTg > 2:1754408/1‑93 (MQ=255)
gccgcGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCg > 2:4663058/1‑93 (MQ=255)
ccgcGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGTGGCAGCGCGTGCGCTGGAGCAGATTACCTGCgg < 1:3514949/93‑1 (MQ=255)
ccgcGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCgg < 2:5485646/93‑1 (MQ=255)
ccgcGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCgg < 1:5039744/93‑1 (MQ=255)
ccgcGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCgg < 1:5170952/93‑1 (MQ=255)
ccgcGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCgg < 1:729151/93‑1 (MQ=255)
gcgcAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCCTGCGCTGGAGCAGATTACCTGCggtg > 2:1002894/1‑93 (MQ=255)
cAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGtt < 1:6456134/93‑1 (MQ=255)
gCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGATGc > 1:955175/1‑93 (MQ=255)
cGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCt > 2:6134579/1‑93 (MQ=255)
gCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTg > 1:4642485/1‑93 (MQ=255)
gCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTg > 1:5882528/1‑93 (MQ=255)
gCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTg > 2:6159879/1‑93 (MQ=255)
cTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGa < 1:2300527/93‑1 (MQ=255)
cTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGa > 2:3755132/1‑93 (MQ=255)
tCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGAt > 2:4574235/1‑93 (MQ=255)
tCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGAt > 2:5133414/1‑93 (MQ=255)
cccGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCATATTACCTGCGGTGGTTGCCTGAtt < 2:4446500/93‑1 (MQ=255)
cccGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGAtt < 2:5275140/93‑1 (MQ=255)
cccGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGAtt > 1:3781574/1‑93 (MQ=255)
ccGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTa < 2:3435943/93‑1 (MQ=255)
cgggcgggCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTAc > 1:2914767/1‑93 (MQ=255)
cgggcgggCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTAc < 2:1267848/93‑1 (MQ=255)
|
CTCGGATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCAGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGT > NC_000913/300624‑300803
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCGCTCGGATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCAGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAACT > NC_000913/300621‑300807
|
TCGCTCGGATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCG < SRR4302537.5897897/94‑1 (MQ=60)
TCGCTCGGATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCG > SRR4302537.5823265/1‑94 (MQ=60)
CGCTCGGATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGG > SRR4302537.4191191/1‑94 (MQ=60)
GCTCGGATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGG > SRR4302537.6286549/1‑94 (MQ=60)
GCTCGGATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGG > SRR4302537.4095440/1‑94 (MQ=60)
CTCGGATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGC > SRR4302537.3279908/1‑94 (MQ=60)
CTCGGATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGC > SRR4302537.696166/1‑94 (MQ=60)
CTCGGATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGC > SRR4302537.1919884/1‑94 (MQ=60)
TCGGATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCG < SRR4302537.584877/94‑1 (MQ=60)
CGGATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGC > SRR4302537.1303732/1‑94 (MQ=60)
CGGATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGC < SRR4302537.6301254/94‑1 (MQ=60)
CGGATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGC > SRR4302537.5883411/1‑94 (MQ=60)
GATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTT < SRR4302537.3192601/94‑1 (MQ=60)
ATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTA > SRR4302537.3931795/1‑94 (MQ=60)
ATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTA > SRR4302537.1553062/1‑94 (MQ=60)
TGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTAT < SRR4302537.2685504/94‑1 (MQ=60)
TGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTAT < SRR4302537.729541/94‑1 (MQ=60)
GGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATT < SRR4302537.3127711/94‑1 (MQ=60)
GGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTG > SRR4302537.1929188/1‑94 (MQ=60)
GTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGC < SRR4302537.3631726/94‑1 (MQ=60)
TGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCA < SRR4302537.803342/94‑1 (MQ=60)
GGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAG > SRR4302537.598367/1‑94 (MQ=60)
GCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGG < SRR4302537.4311600/94‑1 (MQ=60)
GCAATGCAGGCTTCGCTTACGCCTACCACCACGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGG < SRR4302537.4416054/94‑1 (MQ=60)
CAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGG < SRR4302537.3416109/94‑1 (MQ=60)
ATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCT < SRR4302537.138658/94‑1 (MQ=60)
ATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCT < SRR4302537.324536/94‑1 (MQ=60)
TGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTG > SRR4302537.2592511/1‑94 (MQ=60)
CAGGCTTCGCTTACGCCTACCACCTCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCAGGCGCTTATTGCAGGGCTGAT < SRR4302537.4378505/94‑1 (MQ=60)
CAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGAT > SRR4302537.990539/1‑94 (MQ=60)
CAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGAT > SRR4302537.2010080/1‑94 (MQ=60)
CAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGAT > SRR4302537.1577765/1‑94 (MQ=60)
GGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTG > SRR4302537.1966049/1‑94 (MQ=60)
GCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGG > SRR4302537.4563064/1‑94 (MQ=60)
TTCGCTTACTCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTG < SRR4302537.3930345/94‑1 (MQ=60)
TTCCCTTACCCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTG < SRR4302537.1636872/94‑1 (MQ=60)
TCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGT > SRR4302537.2037830/1‑94 (MQ=60)
CGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCGTATTGCAGGGCTGATTGGTGTC > SRR4302537.3419881/1‑94 (MQ=60)
CTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGT < SRR4302537.4174190/94‑1 (MQ=60)
CTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCACGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGT > SRR4302537.2325128/1‑94 (MQ=60)
TTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTA > SRR4302537.5447047/1‑94 (MQ=60)
TTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTA > SRR4302537.1447114/1‑94 (MQ=60)
CGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAA > SRR4302537.6285645/1‑94 (MQ=60)
CGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAA > SRR4302537.3028104/1‑94 (MQ=60)
GCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAA > SRR4302537.5386201/1‑94 (MQ=60)
CCTCCCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAAT < SRR4302537.4124754/94‑1 (MQ=60)
CTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATA > SRR4302537.2440801/1‑94 (MQ=60)
TACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAG < SRR4302537.1684199/94‑1 (MQ=60)
TACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAG > SRR4302537.5424619/1‑94 (MQ=60)
ACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGG < SRR4302537.2779425/94‑1 (MQ=60)
CCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGG < SRR4302537.3444923/94‑1 (MQ=60)
CCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGG < SRR4302537.5509492/94‑1 (MQ=60)
CCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGG < SRR4302537.2469254/94‑1 (MQ=60)
CACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGG > SRR4302537.6360906/1‑94 (MQ=60)
CACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGG > SRR4302537.2858354/1‑94 (MQ=60)
CACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGG > SRR4302537.3498242/1‑94 (MQ=60)
ACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGC < SRR4302537.5010421/94‑1 (MQ=60)
ACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGC < SRR4302537.2221209/94‑1 (MQ=60)
CCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCA < SRR4302537.133135/94‑1 (MQ=60)
GCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGC < SRR4302537.4332591/94‑1 (MQ=60)
CGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCG < SRR4302537.5346097/94‑1 (MQ=60)
GTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGC > SRR4302537.3037989/1‑94 (MQ=60)
GTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGC < SRR4302537.4475968/94‑1 (MQ=60)
GTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGC > SRR4302537.3932848/1‑94 (MQ=60)
GCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGT < SRR4302537.3133858/94‑1 (MQ=60)
TGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGC < SRR4302537.3312165/94‑1 (MQ=60)
TGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGC < SRR4302537.853357/94‑1 (MQ=60)
TGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGC > SRR4302537.3113250/1‑94 (MQ=60)
GACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCG < SRR4302537.752527/94‑1 (MQ=60)
GACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCG > SRR4302537.5397353/1‑94 (MQ=60)
GCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGG > SRR4302537.1857985/1‑94 (MQ=60)
GCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGG < SRR4302537.545148/94‑1 (MQ=60)
CTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGA > SRR4302537.1687660/1‑94 (MQ=60)
TAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAG > SRR4302537.4110447/1‑94 (MQ=60)
AAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCA > SRR4302537.2084737/1‑94 (MQ=60)
AAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCA < SRR4302537.211299/94‑1 (MQ=60)
AGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAG > SRR4302537.1470709/1‑94 (MQ=60)
AGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAG > SRR4302537.4221928/1‑94 (MQ=60)
CCTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGAT < SRR4302537.3633301/94‑1 (MQ=60)
CTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATT < SRR4302537.3806080/94‑1 (MQ=60)
CTTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATT > SRR4302537.5645269/1‑94 (MQ=60)
TTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTA < SRR4302537.3659741/94‑1 (MQ=60)
TTCAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTA < SRR4302537.5726437/94‑1 (MQ=60)
CAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACC < SRR4302537.5668077/94‑1 (MQ=60)
CAAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACC > SRR4302537.63829/1‑94 (MQ=60)
AAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCT > SRR4302537.3738516/1‑94 (MQ=60)
AAGCGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCT < SRR4302537.1727198/94‑1 (MQ=60)
CGCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCG < SRR4302537.3837801/94‑1 (MQ=60)
GCCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTCAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGG > SRR4302537.512928/1‑94 (MQ=60)
CCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGTGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGT < SRR4302537.3539817/94‑1 (MQ=60)
CCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGT < SRR4302537.734130/94‑1 (MQ=60)
CCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGT < SRR4302537.5940591/94‑1 (MQ=60)
CCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGT < SRR4302537.5206557/94‑1 (MQ=60)
CCGCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGT < SRR4302537.5074442/94‑1 (MQ=60)
GCGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGG > SRR4302537.3050308/1‑94 (MQ=60)
CGCAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGT < SRR4302537.4066218/94‑1 (MQ=60)
CAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTG < SRR4302537.6499897/94‑1 (MQ=60)
CAGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTG > SRR4302537.23142/1‑94 (MQ=60)
AGCCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGATGC > SRR4302537.961766/1‑94 (MQ=60)
CCGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCT < SRR4302537.2176123/94‑1 (MQ=60)
CGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTG < SRR4302537.5520023/94‑1 (MQ=60)
CGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTG > SRR4302537.5922895/1‑94 (MQ=60)
CGCTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTG > SRR4302537.4674589/1‑94 (MQ=60)
CTCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGAT < SRR4302537.2316768/94‑1 (MQ=60)
TCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATT > SRR4302537.5784285/1‑94 (MQ=60)
TCCCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATT > SRR4302537.3808129/1‑94 (MQ=60)
CCGGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTAC > SRR4302537.2935239/1‑94 (MQ=60)
GGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGT < SRR4302537.652030/94‑1 (MQ=60)
GGGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGT < SRR4302537.1395970/94‑1 (MQ=60)
GGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTA < SRR4302537.6433357/94‑1 (MQ=60)
GGCGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTA > SRR4302537.3653880/1‑94 (MQ=60)
CGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAAC > SRR4302537.6287131/1‑94 (MQ=60)
CGGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAAC < SRR4302537.1204329/94‑1 (MQ=60)
GGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAACT > SRR4302537.6443217/1‑94 (MQ=60)
GGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAACT < SRR4302537.3551837/94‑1 (MQ=60)
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TCGCTCGGATGGGTGGCAATGCAGGCTTCGCTTACGCCTACCACCGCGTGCTGACGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCAGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAACT > NC_000913/300621‑300807
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
