Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
789,507 |
T→C |
D249G (GAC→GGC) |
galT ← |
galactose‑1‑phosphate uridylyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 789,507 | 0 | T | C | 100.0%
| 721.1
/ NA
| 209 | D249G (GAC→GGC) | galT | galactose‑1‑phosphate uridylyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (109/100); total (109/100) |
Only 100 of 215 total aligned reads displayed.
CCCATAGAGTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGTCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCACGACGGCTAAC > NC_000913/789417‑789596
|
cccATAGAGTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCg > 2:3422088/1‑93 (MQ=255)
cccATAGAGTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCg < 1:1844014/93‑1 (MQ=255)
cATAGAGTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGt > 2:5174069/1‑93 (MQ=255)
cATAGAGTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGt < 1:3650753/93‑1 (MQ=255)
aTAGAGTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTc > 1:3116535/1‑93 (MQ=255)
aTAGAGTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTc > 1:463492/1‑93 (MQ=255)
aTAGAGAAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTc > 1:528695/1‑93 (MQ=255)
tAGAGTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCa > 2:4979863/1‑93 (MQ=255)
agagTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCaa < 1:6327291/93‑1 (MQ=255)
agagTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCaa > 1:50531/1‑93 (MQ=255)
gagTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCaaa < 1:5323789/93‑1 (MQ=255)
gagTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCaaa > 1:3995958/1‑93 (MQ=255)
gagTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCaaa > 1:4245737/1‑93 (MQ=255)
agTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAAt < 2:2410021/93‑1 (MQ=255)
tAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCg < 2:4051826/93‑1 (MQ=255)
aGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCgg > 2:2042081/1‑93 (MQ=255)
ggggAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGt < 2:3778429/93‑1 (MQ=255)
gAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGAt > 2:758486/1‑93 (MQ=255)
gAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGAt < 1:5835557/93‑1 (MQ=255)
aaGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCATCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGGGCCGGTCAAATCGGTGacc < 2:6376031/93‑3 (MQ=255)
aGCACGGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTCCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTa < 1:5894537/93‑1 (MQ=255)
gCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTaa > 1:491500/1‑93 (MQ=255)
gCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTaa > 2:1540675/1‑93 (MQ=255)
gCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTaa < 1:2080302/93‑1 (MQ=255)
aCTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTaaaa < 1:3633750/93‑1 (MQ=255)
tGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACg > 2:2461072/1‑93 (MQ=255)
tGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACg > 1:4110415/1‑93 (MQ=255)
ggAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGt > 2:4567933/1‑93 (MQ=255)
ggAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGt < 2:2981639/93‑1 (MQ=255)
aaGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTgg > 1:2671127/1‑93 (MQ=255)
aaGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGCCAAATCGGTGATCCGCAAAACGTgg > 1:2993331/1‑93 (MQ=255)
ggTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCtt < 1:863676/93‑1 (MQ=255)
ggTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCtt > 2:3111302/1‑93 (MQ=255)
ggTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCtt > 1:3107204/1‑93 (MQ=255)
ggTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCtt < 2:1808374/93‑1 (MQ=255)
gTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCttt < 1:2696481/93‑1 (MQ=255)
gTTGTAATAACGACTGGTCAGCTTTTTCAAAGCCAGCGACAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCttt > 2:6403260/1‑93 (MQ=255)
tGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTgg < 2:5983339/93‑1 (MQ=255)
tCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGgc > 1:4009323/1‑93 (MQ=255)
aTAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGgcag < 2:2790858/93‑1 (MQ=255)
tAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGgcagc > 2:2541763/1‑93 (MQ=255)
tAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGCGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGgcagc > 2:1085512/1‑93 (MQ=255)
gACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTa < 1:3234751/93‑1 (MQ=255)
gACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTa < 2:5315967/93‑1 (MQ=255)
gACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTa < 2:6058365/93‑1 (MQ=255)
gACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTa > 2:4308754/1‑93 (MQ=255)
cTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAgg > 2:4674628/1‑92 (MQ=255)
cTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGc > 1:4731635/1‑93 (MQ=255)
cTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGc < 1:831531/93‑1 (MQ=255)
tGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCg > 1:3851317/1‑93 (MQ=255)
tGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCg < 2:130237/93‑1 (MQ=255)
gTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGtt < 1:4798591/93‑1 (MQ=255)
gTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGtt < 2:5459833/93‑1 (MQ=255)
cAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTc < 1:2925877/93‑1 (MQ=255)
gCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGa < 1:1559123/93‑1 (MQ=255)
gCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGa > 1:3185694/1‑93 (MQ=255)
cTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGaa < 2:1208658/93‑1 (MQ=255)
cTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGaa > 1:4308926/1‑93 (MQ=255)
tttttCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAAc < 2:4243079/93‑1 (MQ=255)
tttttCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAAc < 2:517113/93‑1 (MQ=255)
ttttCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACg > 1:1782074/1‑93 (MQ=255)
tttCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACgg < 2:4139873/93‑1 (MQ=255)
tttCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACgg > 2:914890/1‑93 (MQ=255)
ttCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGc < 2:1621486/93‑1 (MQ=255)
ttCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGc > 1:5908592/1‑93 (MQ=255)
gccagcgccagATCGCTGCGCTGGGCGCCGGTCAAATCGGCGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGCTTCGAACGGCCAGGCa > 2:6192407/1‑93 (MQ=255)
ccagcgccagATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAg > 2:5898985/1‑93 (MQ=255)
cagcgccagATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGc > 2:1909059/1‑93 (MQ=255)
cagcgccagATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGc > 2:5868914/1‑93 (MQ=255)
agcgccagATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGcc > 1:2312842/1‑93 (MQ=255)
gcgccagATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGccc > 1:6169185/1‑93 (MQ=255)
gcgccagATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGccc > 2:362022/1‑93 (MQ=255)
gccagATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAg < 2:1567488/93‑1 (MQ=255)
cagATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTa > 2:4459814/1‑93 (MQ=255)
agATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTaa < 1:2232623/93‑1 (MQ=255)
agATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTaa > 1:4479959/1‑93 (MQ=255)
agATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTaa > 1:5244548/1‑93 (MQ=255)
agATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTaa > 1:1198872/1‑93 (MQ=255)
gATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAg > 1:2288794/1‑93 (MQ=255)
gATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAg > 2:5571330/1‑93 (MQ=255)
gATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAg > 1:1033507/1‑93 (MQ=255)
gATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAg < 1:1872240/93‑1 (MQ=255)
gATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAg > 2:3834247/1‑93 (MQ=255)
aTCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAgg > 2:3742394/1‑93 (MQ=255)
tCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGc > 2:506878/1‑93 (MQ=255)
tCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGc < 1:773007/93‑1 (MQ=255)
cgctgcgctgGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCa < 2:2235676/93‑1 (MQ=255)
cgctgcgctgGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCa < 2:5836242/93‑1 (MQ=255)
cgctgcgctgGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCa < 1:3775213/93‑1 (MQ=255)
gctgcgctgGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCac > 2:2522612/1‑93 (MQ=255)
ctgcgctgGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCacg > 1:5994944/1‑93 (MQ=255)
cgctgGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCacgacg < 1:5594666/93‑1 (MQ=255)
cgctgGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCacgacg < 1:346227/93‑1 (MQ=255)
tgGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCACGACGGCt < 2:5704588/93‑1 (MQ=255)
gggCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGACCGGCCAGGCAGCCCAGAAAGGCACGACGGCTa > 1:1423229/1‑93 (MQ=255)
gggCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCACGACGGCTa > 1:5701136/1‑93 (MQ=255)
gggCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCACGACGGCTa < 2:3958126/93‑1 (MQ=255)
gcgcCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCACGACGGCTAAc < 1:5730803/93‑1 (MQ=255)
gcgcCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCACGACGGCTAAc < 1:2157975/93‑1 (MQ=255)
gcgcCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCACGACGGCTAAc < 1:4267513/93‑1 (MQ=255)
|
CCCATAGAGTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGTCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCACGACGGCTAAC > NC_000913/789417‑789596
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGCCCATAGAGTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGTCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCACGACGGCTAACC > NC_000913/789414‑789597
|
CAGCCCATAGAGTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGC > SRR4302537.6148962/1‑94 (MQ=60)
AGCCCATAGAGTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCC > SRR4302537.4691436/1‑94 (MQ=60)
GCCCATAGAGTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCG < SRR4302537.2706894/94‑1 (MQ=60)
GCCCATAGAGTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCG < SRR4302537.4674916/94‑1 (MQ=60)
CCCATAGAGTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGG < SRR4302537.1856848/94‑1 (MQ=60)
CATAGAGTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTC < SRR4302537.3676453/94‑1 (MQ=60)
CATAGAGTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTC > SRR4302537.466682/1‑94 (MQ=60)
CATAGAGTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTC > SRR4302537.3138299/1‑94 (MQ=60)
CATAGAGAAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTC > SRR4302537.532321/1‑94 (MQ=60)
ATAGAGTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCA < SRR4302537.3853282/94‑1 (MQ=60)
TAGAGTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAA > SRR4302537.50907/1‑94 (MQ=60)
AGAGTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAA > SRR4302537.4023931/1‑94 (MQ=60)
AGAGTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAA < SRR4302537.6370565/94‑1 (MQ=60)
AGAGTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAA > SRR4302537.4275244/1‑94 (MQ=60)
GAGTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAAT < SRR4302537.5360324/94‑1 (MQ=60)
GTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCG < SRR4302537.5783528/94‑1 (MQ=60)
TAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGG > SRR4302537.5928541/1‑94 (MQ=60)
AGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGT < SRR4302537.524798/94‑1 (MQ=60)
AGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGT > SRR4302537.1352432/1‑94 (MQ=60)
GAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATC < SRR4302537.5875552/94‑1 (MQ=60)
AAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCC < SRR4302537.575324/94‑1 (MQ=60)
AAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCC < SRR4302537.4847379/94‑1 (MQ=60)
AAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCC > SRR4302537.2313089/1‑94 (MQ=60)
GAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTA > SRR4302537.684689/1‑94 (MQ=60)
AGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAA > SRR4302537.494878/1‑94 (MQ=60)
AGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAA > SRR4302537.4134459/1‑94 (MQ=60)
AGCACGGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTCCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAA < SRR4302537.5934980/94‑1 (MQ=60)
GCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAA < SRR4302537.2094953/94‑1 (MQ=60)
ACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAAC < SRR4302537.3659350/94‑1 (MQ=60)
ACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAAC < SRR4302537.1798063/94‑1 (MQ=60)
ACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAAC < SRR4302537.2026350/94‑1 (MQ=60)
CTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACG > SRR4302537.4139130/1‑94 (MQ=60)
CTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACG < SRR4302537.5937228/94‑1 (MQ=60)
TGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAcacgg > SRR4302537.803265/1‑89 (MQ=60)
GGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTG < SRR4302537.4175305/94‑1 (MQ=60)
GAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGG < SRR4302537.604553/94‑1 (MQ=60)
GAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGG < SRR4302537.3182977/94‑1 (MQ=60)
GAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGG > SRR4302537.2689785/1‑94 (MQ=60)
GAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGCCAAATCGGTGATCCGCAAAACGTGG > SRR4302537.3014216/1‑94 (MQ=60)
GAAGAGGTTGTCAGAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGG < SRR4302537.2289452/94‑1 (MQ=60)
AGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTT > SRR4302537.3128905/1‑94 (MQ=60)
GGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTT < SRR4302537.869601/94‑1 (MQ=60)
GTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTG < SRR4302537.1877718/94‑1 (MQ=60)
GTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTG < SRR4302537.2715320/94‑1 (MQ=60)
TGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGG < SRR4302537.3406194/94‑1 (MQ=60)
TGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGG > SRR4302537.2130908/1‑94 (MQ=60)
GTCATAACGACTGGTCAGCTTTTTCACCGCCAGCCCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGC < SRR4302537.323433/94‑1 (MQ=60)
GTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGC > SRR4302537.4037389/1‑94 (MQ=60)
CATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAG < SRR4302537.5324710/94‑1 (MQ=60)
AACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAG > SRR4302537.3073573/1‑94 (MQ=60)
CGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTA > SRR4302537.160622/1‑94 (MQ=60)
GACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAG < SRR4302537.3257551/94‑1 (MQ=60)
ACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGC > SRR4302537.4764328/1‑94 (MQ=60)
CTGGTCAGCTTTTTCAACTCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCG < SRR4302537.3530443/94‑1 (MQ=60)
CTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCG > SRR4302537.3878283/1‑94 (MQ=60)
CTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCG < SRR4302537.837218/94‑1 (MQ=60)
CTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCG > SRR4302537.6226948/1‑94 (MQ=60)
CTGGTCAGCTTTCTCAACGCAAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCG > SRR4302537.4599909/1‑94 (MQ=60)
TGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGT > SRR4302537.5633470/1‑94 (MQ=60)
GGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTT > SRR4302537.838522/1‑94 (MQ=60)
GGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTT > SRR4302537.3659672/1‑94 (MQ=60)
GGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTT < SRR4302537.4311756/94‑1 (MQ=60)
GTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTT < SRR4302537.4831700/94‑1 (MQ=60)
TCAGCTTTTTCAACTCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTC < SRR4302537.478577/94‑1 (MQ=60)
CAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCG < SRR4302537.2946424/94‑1 (MQ=60)
CAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCG > SRR4302537.4125365/1‑94 (MQ=60)
AGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGA > SRR4302537.3208099/1‑94 (MQ=60)
GCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAA > SRR4302537.4338876/1‑94 (MQ=60)
GCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAA < SRR4302537.1570006/94‑1 (MQ=60)
CTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGCCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAAC < SRR4302537.2700865/94‑1 (MQ=60)
TTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACG > SRR4302537.1794494/1‑94 (MQ=60)
TTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACG > SRR4302537.4684049/1‑94 (MQ=60)
TTTCAACGCCCGGGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAAGGGC < SRR4302537.5079200/94‑1 (MQ=60)
TTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGC > SRR4302537.5285488/1‑94 (MQ=60)
TTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGC > SRR4302537.5949139/1‑94 (MQ=60)
AACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGG < SRR4302537.2956619/94‑1 (MQ=60)
ACGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGC > SRR4302537.3138090/1‑94 (MQ=60)
CGCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCA < SRR4302537.5988139/94‑1 (MQ=60)
GCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAG > SRR4302537.1056698/1‑94 (MQ=60)
GCCAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAG > SRR4302537.293775/1‑94 (MQ=60)
CAGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCC > SRR4302537.2329167/1‑94 (MQ=60)
agccgCAGATCGCTGCGCTGTGCTCCGGTCAAAGCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCC < SRR4302537.4779308/89‑1 (MQ=60)
AGCGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCC > SRR4302537.6211666/1‑94 (MQ=60)
CGCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAG < SRR4302537.369134/94‑1 (MQ=60)
GCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGT < SRR4302537.4030206/94‑1 (MQ=60)
GCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGT < SRR4302537.6095638/94‑1 (MQ=60)
GCCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGA > SRR4302537.966333/1‑94 (MQ=60)
CCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTA > SRR4302537.2173399/1‑94 (MQ=60)
CCAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTA > SRR4302537.481595/1‑94 (MQ=60)
CAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAA > SRR4302537.5280638/1‑94 (MQ=60)
CAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAA > SRR4302537.1207204/1‑94 (MQ=60)
CAGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAA > SRR4302537.4510951/1‑94 (MQ=60)
AGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGGGTTTCGAACGGCCAGGCAGCCCAGTAAG > SRR4302537.3956080/1‑94 (MQ=60)
AGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAG > SRR4302537.1040627/1‑94 (MQ=60)
AGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAG > SRR4302537.2504317/1‑94 (MQ=60)
AGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAG > SRR4302537.2304937/1‑94 (MQ=60)
AGATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAG < SRR4302537.2248370/94‑1 (MQ=60)
GATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGG < SRR4302537.1526444/94‑1 (MQ=60)
GATCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGG < SRR4302537.1885269/94‑1 (MQ=60)
TCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCA < SRR4302537.778303/94‑1 (MQ=60)
TCGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCA < SRR4302537.1973651/94‑1 (MQ=60)
CGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCAC < SRR4302537.3801721/94‑1 (MQ=60)
CGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCAC > SRR4302537.440371/1‑94 (MQ=60)
CGCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCAC > SRR4302537.4276257/1‑94 (MQ=60)
GCTGCGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCACG > SRR4302537.6036115/1‑94 (MQ=60)
CGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCACGACGG < SRR4302537.5632919/94‑1 (MQ=60)
CGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCACGACGG < SRR4302537.348633/94‑1 (MQ=60)
CGCTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTCGGGCAGCAGCAGCGTTTTGACAGGCAAGGCAGCCAAGAAAGGCACGACGG > SRR4302537.3389031/1‑94 (MQ=53)
CTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCACGACGGCT < SRR4302537.5399292/94‑1 (MQ=60)
CTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCACGACGGCT > SRR4302537.5557954/1‑94 (MQ=60)
CTGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCACGACGGCT < SRR4302537.2775170/94‑1 (MQ=60)
TGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGACCGGCCAGGCAGCCCAGAAAGGCACGACGGCTA > SRR4302537.1433140/1‑94 (MQ=60)
TGGGCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCACGACGGCTA > SRR4302537.5740150/1‑94 (MQ=60)
GCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCACGACGGCTAACC < SRR4302537.2173185/94‑1 (MQ=60)
GCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCACGACGGCTAACC < SRR4302537.4297163/94‑1 (MQ=60)
GCGCCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCACGACGGCTAACC < SRR4302537.5770028/94‑1 (MQ=60)
|
CAGCCCATAGAGTAGGGGAAGGAGCACTGGAAGAGGTTGTCATAACGACTGGTCAGCTTTTTCAACGCCAGCGCCAGATCGCTGCGCTGGGCGTCGGTCAAATCGGTGATCCGTAAAACGTGGGCTTTGGGCAGCAGTAGCGTTTCGAACGGCCAGGCAGCCCAGTAAGGCACGACGGCTAACC > NC_000913/789414‑789597
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
