Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,977,901 |
A→G |
D42G (GAC→GGC) |
yecG → |
putative regulator |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,977,901 | 0 | A | G | 100.0%
| 961.1
/ NA
| 277 | D42G (GAC→GGC) | yecG | putative regulator |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (143/134); total (143/134) |
Only 100 of 283 total aligned reads displayed.
TTACACCGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGACCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATAAGT > NC_000913/1977811‑1977990
|
ttACACCGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGcc < 1:4840369/93‑1 (MQ=255)
ttACACCGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGcc < 1:75519/93‑1 (MQ=255)
cacCGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCgg > 1:4693649/1‑93 (MQ=255)
cacCGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCgg > 1:5359779/1‑93 (MQ=255)
acCGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGa > 1:4464560/1‑93 (MQ=255)
cGGAAAGTCAGCAACTGCTGGCAAACGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGaaa < 1:918172/93‑1 (MQ=255)
cGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGaaa < 2:183037/93‑1 (MQ=255)
ggAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAAt < 2:4570663/93‑1 (MQ=255)
ggAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAAt > 1:560832/1‑93 (MQ=255)
gAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATg > 2:3534390/1‑93 (MQ=255)
aaGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTa > 1:1068503/1‑93 (MQ=255)
aGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTAc < 1:5807898/93‑1 (MQ=255)
gTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGCAATGTAca > 2:1250428/1‑93 (MQ=255)
tCAGCAACTGCTGGCAAAAGCGGCATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTAcaa > 1:1852728/1‑93 (MQ=255)
cAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTAcaat < 2:2264844/93‑1 (MQ=255)
cAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGCGACACATCAGTTTAATTCCTCTCGCTTCCGGCCCGGAAATGTAcaat < 2:4957595/93‑1 (MQ=255)
aGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTAcaatc > 2:3650554/1‑93 (MQ=255)
aGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTAcaatc < 1:5237559/93‑1 (MQ=255)
aGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTAcaatc < 2:5404463/93‑1 (MQ=255)
gCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTAcaatca > 1:623563/1‑93 (MQ=255)
aaCTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTAcaatcaat < 1:225775/93‑1 (MQ=255)
aaCTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTAcaatcaat > 1:4177322/1‑93 (MQ=255)
aCTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAAtt > 1:2093190/1‑93 (MQ=255)
tgctgGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAg > 2:5944125/1‑93 (MQ=255)
ctgGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCt > 2:1329145/1‑93 (MQ=255)
ctgGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCt < 2:2058871/93‑1 (MQ=255)
ctgGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCt < 1:3033250/93‑1 (MQ=255)
ctgGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCt < 1:1718433/93‑1 (MQ=255)
tgGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTg > 1:249289/1‑93 (MQ=255)
tgGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTg > 1:1662078/1‑93 (MQ=255)
ggCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTgc < 2:2964968/93‑1 (MQ=255)
ggCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTgc > 2:4253160/1‑93 (MQ=255)
ggCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTgc < 2:3997782/93‑1 (MQ=255)
gCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTgcg > 2:5570922/1‑93 (MQ=255)
cAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTgcgc < 1:4233071/93‑1 (MQ=255)
aaaaGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGcc > 1:3590631/1‑93 (MQ=255)
aaGCGGTATCTATCGCCAGGGCAGTAAAGGCACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGa < 1:5368207/93‑1 (MQ=255)
aaGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGa > 1:3184467/1‑93 (MQ=255)
gCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATg > 1:4301534/1‑93 (MQ=255)
cGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGc < 1:233516/93‑1 (MQ=255)
ggTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCt > 2:4385345/1‑93 (MQ=255)
tatctatcGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTg > 2:1267364/1‑93 (MQ=255)
atctatcGCCAGACCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGa > 1:3486144/1‑93 (MQ=255)
tctatcGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGaa > 1:2842765/1‑93 (MQ=255)
tatcGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGa < 1:3884021/93‑1 (MQ=255)
tatcGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTATCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGa > 2:3250859/1‑93 (MQ=255)
cGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGAttt < 1:3717271/93‑1 (MQ=255)
gccaggccagTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTa > 2:6168072/1‑93 (MQ=255)
gccaggccagTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTa > 2:1866597/1‑93 (MQ=255)
gccaggccagTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTa > 1:643414/1‑93 (MQ=255)
ccaggccagTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTAc > 1:1003320/1‑93 (MQ=255)
caggccagTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACg > 1:3958038/1‑93 (MQ=255)
caggccagTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACg > 2:2887631/1‑93 (MQ=255)
caggccagTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACg > 1:6408769/1‑93 (MQ=255)
gTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTg > 2:346130/1‑93 (MQ=255)
gTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTg > 2:2693187/1‑93 (MQ=255)
gTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTg > 1:3298127/1‑93 (MQ=255)
tAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGa > 2:312072/1‑93 (MQ=255)
aaGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATg > 2:5120359/1‑93 (MQ=255)
aGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGc > 1:4893561/1‑93 (MQ=255)
gggACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCa > 1:2205558/1‑93 (MQ=255)
gggACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCa > 2:5597599/1‑93 (MQ=255)
gggACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCa < 2:1739813/93‑1 (MQ=255)
gggACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCa < 1:2625879/93‑1 (MQ=255)
gACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATg > 2:1022113/1‑93 (MQ=255)
acacATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATga > 2:704753/1‑93 (MQ=255)
acacATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATga < 2:3288695/93‑1 (MQ=255)
acacATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATga < 1:6337549/93‑1 (MQ=255)
cacaTCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATgaa < 2:5761911/93‑1 (MQ=255)
acaTCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATgaag < 1:5673484/93‑1 (MQ=255)
caTCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATgaaga < 2:4221681/93‑1 (MQ=255)
aTCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGCGATGCATgaagaa > 2:4862054/1‑93 (MQ=255)
cAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAAc < 2:5275563/93‑1 (MQ=255)
gTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGc > 2:1189669/1‑93 (MQ=255)
gTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGc > 1:6033197/1‑93 (MQ=255)
aaTTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGAAAAg < 1:2885671/93‑1 (MQ=255)
aCTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCttt > 2:2593064/1‑93 (MQ=255)
aCTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCttt > 1:5157035/1‑93 (MQ=255)
ctctCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTc < 1:5505497/93‑1 (MQ=255)
ctctCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTc > 1:4021129/1‑93 (MQ=255)
ctctCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTc < 1:1110840/93‑1 (MQ=255)
tctcGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCt > 2:277559/1‑93 (MQ=255)
tctcGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCt > 1:2267872/1‑93 (MQ=255)
tctcGCTTCCGGCACGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCt < 1:1393401/93‑1 (MQ=255)
ctcGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCtt < 1:615306/93‑1 (MQ=255)
ctcGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCtt < 2:4928178/93‑1 (MQ=255)
tcGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTg > 2:1580559/1‑93 (MQ=255)
cGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGa < 2:3913436/93‑1 (MQ=255)
cGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGa < 1:1431602/93‑1 (MQ=255)
gCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGAt > 1:5967839/1‑93 (MQ=255)
gCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGAt < 1:2579200/93‑1 (MQ=255)
cTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATa > 2:2378592/1‑93 (MQ=255)
cTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATa > 2:1482342/1‑93 (MQ=255)
cTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATa < 2:2530442/93‑1 (MQ=255)
ttCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATaa < 1:4964824/93‑1 (MQ=255)
ttCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATaa < 1:4560269/93‑1 (MQ=255)
ttCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATaa < 1:407253/93‑1 (MQ=255)
tCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATAAg > 1:520408/1‑93 (MQ=255)
tCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATAAg < 2:2430484/93‑1 (MQ=255)
tCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATAAg < 1:1960586/93‑1 (MQ=255)
|
TTACACCGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGACCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATAAGT > NC_000913/1977811‑1977990
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGGTTACACCGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGACCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATAAGTTAAT > NC_000913/1977808‑1977994
|
CGGTTACACCGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGG > SRR4302537.1012752/1‑94 (MQ=60)
CGGTTACACCGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGG < SRR4302537.3748303/94‑1 (MQ=60)
GGTTACACCGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGC > SRR4302537.1710848/1‑94 (MQ=60)
GGTTACACCGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGC > SRR4302537.5802580/1‑94 (MQ=60)
GGTTACACCGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGC > SRR4302537.2935593/1‑94 (MQ=60)
TTACACCGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCC < SRR4302537.76075/94‑1 (MQ=60)
TTACACCGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCC < SRR4302537.4873779/94‑1 (MQ=60)
TACACCGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCG < SRR4302537.3079514/94‑1 (MQ=60)
ACACCGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGG > SRR4302537.5396482/1‑94 (MQ=60)
ACACCGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGG > SRR4302537.2631828/1‑94 (MQ=60)
ACACCGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGG > SRR4302537.4726115/1‑94 (MQ=60)
CACCGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGA > SRR4302537.4495436/1‑94 (MQ=60)
CGGAAAGTCAGCAACTGCTGGCAAACGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAAT < SRR4302537.924512/94‑1 (MQ=60)
CGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAAT > SRR4302537.6003347/1‑94 (MQ=60)
CGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAAT > SRR4302537.564694/1‑94 (MQ=60)
GGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATG < SRR4302537.2075760/94‑1 (MQ=60)
AAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTA > SRR4302537.1075869/1‑94 (MQ=60)
AGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACA < SRR4302537.5847727/94‑1 (MQ=60)
AGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACA < SRR4302537.406557/94‑1 (MQ=60)
GTCAGCAACTGCTGGCAAAAGCGGCATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAA > SRR4302537.1865611/1‑94 (MQ=60)
TCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAAT < SRR4302537.5512486/94‑1 (MQ=60)
CAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATC > SRR4302537.5800951/1‑94 (MQ=60)
CAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATC < SRR4302537.987660/94‑1 (MQ=60)
CAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATAAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATC > SRR4302537.5562745/1‑94 (MQ=60)
AGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCA > SRR4302537.627810/1‑94 (MQ=60)
AGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCA < SRR4302537.5273596/94‑1 (MQ=60)
CAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAAT > SRR4302537.4619970/1‑94 (MQ=60)
CAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAAT < SRR4302537.4739300/94‑1 (MQ=60)
CAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAAT > SRR4302537.4206485/1‑94 (MQ=60)
AACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATT > SRR4302537.2986660/1‑94 (MQ=60)
AACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATT < SRR4302537.3054528/94‑1 (MQ=60)
AACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATT < SRR4302537.227377/94‑1 (MQ=60)
AACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATT > SRR4302537.2107952/1‑94 (MQ=60)
AACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATT > SRR4302537.1931141/1‑94 (MQ=60)
AACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATT < SRR4302537.1870709/94‑1 (MQ=60)
ACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTA > SRR4302537.665705/1‑94 (MQ=60)
ACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTA > SRR4302537.2627704/1‑94 (MQ=60)
CTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAG > SRR4302537.6474344/1‑94 (MQ=60)
CTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAG < SRR4302537.4798732/94‑1 (MQ=60)
GCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCT < SRR4302537.2276573/94‑1 (MQ=60)
CTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTG < SRR4302537.3054398/94‑1 (MQ=60)
CTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTG < SRR4302537.2349190/94‑1 (MQ=60)
CTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTG > SRR4302537.251061/1‑94 (MQ=60)
CTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTG < SRR4302537.1730444/94‑1 (MQ=60)
CTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTG > SRR4302537.1673726/1‑94 (MQ=60)
GGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCG < SRR4302537.1817866/94‑1 (MQ=60)
GGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCG > SRR4302537.5878955/1‑94 (MQ=60)
GCAAAAGCTGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGC < SRR4302537.1415038/94‑1 (MQ=60)
CAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCC > SRR4302537.3615940/1‑94 (MQ=60)
CAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCC < SRR4302537.4262531/94‑1 (MQ=60)
AAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCG > SRR4302537.5245174/1‑94 (MQ=60)
AAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGA > SRR4302537.3206857/1‑94 (MQ=60)
AAGCGGTATCTATCGCCAGGGCAGTAAAGGCACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGAT < SRR4302537.5404938/94‑1 (MQ=60)
AGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATG > SRR4302537.4331428/1‑94 (MQ=60)
CGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCT < SRR4302537.235165/94‑1 (MQ=60)
CGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCT > SRR4302537.5252778/1‑94 (MQ=60)
GGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTT < SRR4302537.107677/94‑1 (MQ=60)
GGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTT < SRR4302537.1766925/94‑1 (MQ=60)
GGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTT > SRR4302537.5208009/1‑94 (MQ=60)
GTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTG < SRR4302537.4212609/94‑1 (MQ=60)
GTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTG > SRR4302537.3617678/1‑94 (MQ=60)
TATCTATCGCCAGACCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGA > SRR4302537.3510799/1‑94 (MQ=60)
ATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAACTGTACAATCAATTAGCTGCGCCGATGCTTGAA > SRR4302537.722017/1‑94 (MQ=60)
ATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAA < SRR4302537.5452289/94‑1 (MQ=60)
ATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAA > SRR4302537.2862662/1‑94 (MQ=60)
CTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGA > SRR4302537.1106009/1‑94 (MQ=60)
TATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGAT < SRR4302537.3911189/94‑1 (MQ=60)
ATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATT < SRR4302537.3810652/94‑1 (MQ=60)
ATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATT > SRR4302537.5694279/1‑94 (MQ=60)
TCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTT > SRR4302537.4315603/1‑94 (MQ=60)
CGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTA > SRR4302537.647797/1‑94 (MQ=60)
CGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTA > SRR4302537.4503986/1‑94 (MQ=60)
CGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTA < SRR4302537.3743399/94‑1 (MQ=60)
GCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTAC > SRR4302537.4392645/1‑94 (MQ=60)
GCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTAC > SRR4302537.1010245/1‑94 (MQ=60)
CCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACG > SRR4302537.2268330/1‑94 (MQ=60)
CCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACG > SRR4302537.3985733/1‑94 (MQ=60)
CCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACG > SRR4302537.6452378/1‑94 (MQ=60)
CCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACG < SRR4302537.6306853/94‑1 (MQ=60)
GCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGC < SRR4302537.212547/94‑1 (MQ=60)
CCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCG > SRR4302537.2408275/1‑94 (MQ=60)
CCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCG > SRR4302537.846888/1‑94 (MQ=60)
CCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCG < SRR4302537.4263871/94‑1 (MQ=60)
AGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTG > SRR4302537.3402539/1‑94 (MQ=60)
AGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTG < SRR4302537.3219012/94‑1 (MQ=60)
AGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTG > SRR4302537.2843933/1‑94 (MQ=60)
AGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTG > SRR4302537.3321442/1‑94 (MQ=60)
AAAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATG < SRR4302537.240890/94‑1 (MQ=60)
AAGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGC > SRR4302537.4927352/1‑94 (MQ=60)
AGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCA < SRR4302537.6019708/94‑1 (MQ=60)
AGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCA > SRR4302537.1006584/1‑94 (MQ=60)
AGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCA > SRR4302537.1509722/1‑94 (MQ=60)
AGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCA > SRR4302537.4521068/1‑94 (MQ=60)
AGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCA > SRR4302537.2117406/1‑94 (MQ=60)
AGGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCA > SRR4302537.2221112/1‑94 (MQ=60)
GGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCAT > SRR4302537.6124599/1‑94 (MQ=60)
GGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCAT > SRR4302537.135494/1‑94 (MQ=60)
GGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCAT < SRR4302537.2644276/94‑1 (MQ=60)
AGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCAT < SRR4302537.6251269/94‑1 (MQ=60)
AGGACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCAT < SRR4302537.6251270/94‑1 (MQ=60)
ACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAA < SRR4302537.6380864/94‑1 (MQ=60)
ACACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAA < SRR4302537.6303482/94‑1 (MQ=60)
CACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAG > SRR4302537.4605600/1‑94 (MQ=60)
ACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGGCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGA > SRR4302537.5730520/1‑94 (MQ=60)
ACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGA < SRR4302537.5585846/94‑1 (MQ=60)
ACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGA < SRR4302537.1032474/94‑1 (MQ=60)
ACATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGA < SRR4302537.5712304/94‑1 (MQ=60)
CATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAA < SRR4302537.4045102/94‑1 (MQ=60)
CATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAA > SRR4302537.4454146/1‑94 (MQ=60)
ATCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAA > SRR4302537.3929840/1‑94 (MQ=60)
TCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAAC < SRR4302537.2531118/94‑1 (MQ=60)
TCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAAC > SRR4302537.4927784/1‑94 (MQ=60)
TCAGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAAC < SRR4302537.3238284/94‑1 (MQ=60)
AGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGC > SRR4302537.6074652/1‑94 (MQ=60)
AGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGC > SRR4302537.379480/1‑94 (MQ=60)
AGTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGA > SRR4302537.3971933/1‑94 (MQ=60)
GTTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCA > SRR4302537.2019716/1‑94 (MQ=60)
TTTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAA > SRR4302537.1692604/1‑94 (MQ=60)
TTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAA > SRR4302537.1018481/1‑94 (MQ=60)
TTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAA < SRR4302537.6437001/94‑1 (MQ=60)
TTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAA > SRR4302537.5342724/1‑94 (MQ=60)
TTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAA > SRR4302537.4025634/1‑94 (MQ=60)
TTAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAA < SRR4302537.493635/94‑1 (MQ=60)
TAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAG < SRR4302537.4123036/94‑1 (MQ=60)
TAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAG < SRR4302537.5118583/94‑1 (MQ=60)
TAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAG < SRR4302537.2245113/94‑1 (MQ=60)
TAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAG < SRR4302537.1257452/94‑1 (MQ=60)
TAATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAG < SRR4302537.1506983/94‑1 (MQ=60)
AATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGAAAAGC < SRR4302537.2905923/94‑1 (MQ=60)
ATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCT < SRR4302537.3518497/94‑1 (MQ=60)
ATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCT < SRR4302537.2759358/94‑1 (MQ=60)
ATTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCT < SRR4302537.4139259/94‑1 (MQ=60)
TTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTT < SRR4302537.4885077/94‑1 (MQ=60)
TTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTT < SRR4302537.5296373/94‑1 (MQ=60)
TTACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTT > SRR4302537.2323410/1‑94 (MQ=60)
TACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTT > SRR4302537.5192571/1‑94 (MQ=60)
ACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTC > SRR4302537.3526872/1‑94 (MQ=60)
ACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTC < SRR4302537.6417569/94‑1 (MQ=60)
ACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTC > SRR4302537.4049285/1‑94 (MQ=60)
ACTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTC > SRR4302537.876094/1‑94 (MQ=60)
CTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCT < SRR4302537.1118513/94‑1 (MQ=60)
CTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCT < SRR4302537.5543091/94‑1 (MQ=60)
CTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCT > SRR4302537.2888272/1‑94 (MQ=60)
CTCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCT > SRR4302537.2283887/1‑94 (MQ=60)
TCTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTT < SRR4302537.540148/94‑1 (MQ=60)
TCTCGCTTCCGGCACGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTT < SRR4302537.1403116/94‑1 (MQ=60)
CTCGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTG < SRR4302537.619496/94‑1 (MQ=60)
CGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGAT < SRR4302537.3360452/94‑1 (MQ=60)
CGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGAT < SRR4302537.1441568/94‑1 (MQ=60)
CGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGAT > SRR4302537.6118614/1‑94 (MQ=60)
CGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGAT > SRR4302537.6008801/1‑94 (MQ=60)
CGCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGAT > SRR4302537.1408918/1‑94 (MQ=60)
GCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATA < SRR4302537.3037060/94‑1 (MQ=60)
GCTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATA < SRR4302537.2597255/94‑1 (MQ=60)
CTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATAA < SRR4302537.5697488/94‑1 (MQ=60)
CTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATAA > SRR4302537.5214871/1‑94 (MQ=60)
CTTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATAA < SRR4302537.4081407/94‑1 (MQ=60)
TTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATAAG < SRR4302537.4591832/94‑1 (MQ=60)
TTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATAAG > SRR4302537.2592688/1‑94 (MQ=60)
TTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATAAG < SRR4302537.4999047/94‑1 (MQ=60)
TTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATAAG > SRR4302537.523990/1‑94 (MQ=60)
TTCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATAAG < SRR4302537.410076/94‑1 (MQ=60)
TCCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATAAGT < SRR4302537.1974223/94‑1 (MQ=60)
CCGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATAAGTT < SRR4302537.5119992/94‑1 (MQ=60)
CGGCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATAAGTTA < SRR4302537.1203979/94‑1 (MQ=60)
GCCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATAAGTTAAT < SRR4302537.1885903/94‑1 (MQ=60)
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CGGTTACACCGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGACCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATAAGTTAAT > NC_000913/1977808‑1977994
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |