Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,610,118 |
T→C |
Y67H (TAC→CAC) |
b2491 → |
HyfR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,610,118 | 0 | T | C | 97.5%
| 670.1
/ 4.4
| 199 | Y67H (TAC→CAC) | b2491 | HyfR |
| Reads supporting (aligned to +/- strand): ref base T (3/2); new base C (100/94); total (103/96) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.64e-01 |
Only 100 of 204 total aligned reads displayed.
TTATTACGCGCCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTCGGCAGTAGT > NC_000913/2610028‑2610210
|
attaCGCGCCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGccacca < 2:3566352/93‑1 (MQ=255)
aCGCGCCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCatga < 2:323528/93‑1 (MQ=255)
gcgcCTTCATCCCTCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCatgatg < 1:4287101/93‑1 (MQ=255)
cgcCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCatgatga < 2:3715615/93‑1 (MQ=255)
gcCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCatgatgat < 1:4616361/93‑1 (MQ=255)
ccTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCatgatgatg < 1:4736019/93‑1 (MQ=255)
ccTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCatgatgatg < 1:5236708/93‑1 (MQ=255)
cTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATgg > 1:3109663/1‑93 (MQ=255)
cTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATgg > 1:2541938/1‑93 (MQ=255)
cTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATgg > 1:5546456/1‑93 (MQ=255)
tCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCa > 2:141814/1‑93 (MQ=255)
cATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAg < 1:1749372/93‑1 (MQ=255)
cATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAg < 2:6105505/93‑1 (MQ=255)
aTCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGc > 1:485143/1‑93 (MQ=255)
tCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCg > 2:40749/1‑93 (MQ=255)
tCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCg > 1:1000306/1‑93 (MQ=255)
tCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCg > 2:2896866/1‑93 (MQ=255)
cccGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGa < 2:3013752/93‑1 (MQ=255)
gCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGAtgt < 1:1843600/93‑1 (MQ=255)
gCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGAtgt < 1:3678550/93‑1 (MQ=255)
cTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGAtgtg > 1:1046817/1‑93 (MQ=255)
gccgccgccGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGAc < 2:1513004/93‑1 (MQ=255)
gccgccgccGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGAc < 1:285226/93‑1 (MQ=255)
cgccgccgTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACgg < 1:325606/93‑1 (MQ=255)
gccgccgTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGc > 1:1980788/1‑93 (MQ=255)
gccgccgTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGc > 2:548321/1‑93 (MQ=255)
gccgccgTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGc < 2:5896195/93‑1 (MQ=255)
gccgTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGcaac > 2:26278/1‑93 (MQ=255)
gTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCaacaac < 2:446929/93‑1 (MQ=255)
ttCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAacaaca > 2:2341561/1‑93 (MQ=255)
ttCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAacaaca > 2:2038118/1‑93 (MQ=255)
tCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACag > 2:1537551/1‑93 (MQ=255)
tCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACag > 2:1044517/1‑93 (MQ=255)
tCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACag < 1:66830/93‑1 (MQ=255)
cAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACaga < 1:1959729/93‑1 (MQ=255)
cAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACaga < 1:4894667/93‑1 (MQ=255)
aGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTTCCGGCACCATGATGATGGCAGCGATGTGACGGCAACAACagag < 2:750542/93‑1 (MQ=255)
aGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACagag < 2:5927199/93‑1 (MQ=255)
aGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACagag < 1:5571878/93‑1 (MQ=255)
gCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGt > 2:1824133/1‑93 (MQ=255)
gCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGt > 2:2297700/1‑93 (MQ=255)
ccGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTAt > 1:2695950/1‑93 (MQ=255)
cGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATc > 1:4237655/1‑93 (MQ=255)
cGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATc > 1:1645830/1‑93 (MQ=255)
ggTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCa > 1:5724848/1‑93 (MQ=255)
ggTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCa > 2:4503496/1‑93 (MQ=255)
ggTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCa > 2:5424901/1‑93 (MQ=255)
gTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAg < 2:4696754/93‑1 (MQ=255)
gTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAg < 2:4976860/93‑1 (MQ=255)
aCAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAggg > 2:2744774/1‑93 (MQ=255)
aCAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAggg > 1:963398/1‑93 (MQ=255)
ttATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCgaga > 1:3846221/1‑93 (MQ=255)
tATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGAt < 2:5631742/93‑1 (MQ=255)
tATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGAt < 2:5096736/93‑1 (MQ=255)
tATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGAt < 1:843915/93‑1 (MQ=255)
aTTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATg > 1:4400280/1‑93 (MQ=255)
ttGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGATATgg > 2:5046375/1‑93 (MQ=255)
ttGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATgg < 1:3496466/93‑1 (MQ=255)
cTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCATGGCGAGTTGGTCGat < 2:6313494/93‑1 (MQ=255)
tGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGatt > 1:408361/1‑93 (MQ=255)
tGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGatt < 2:4621513/93‑1 (MQ=255)
tGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGatt < 2:4204416/93‑1 (MQ=255)
gCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGatta > 1:4360923/1‑93 (MQ=255)
gCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGatta > 2:3147751/1‑93 (MQ=255)
cATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGattat < 2:554057/93‑1 (MQ=255)
cATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGattat < 1:1374838/93‑1 (MQ=255)
cATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGattat > 2:5921914/1‑93 (MQ=255)
cATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGattat < 1:5633938/93‑1 (MQ=255)
cATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGattat > 1:3008286/1‑93 (MQ=255)
cATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGattat < 1:2440461/93‑1 (MQ=255)
tGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTc < 1:3299612/93‑1 (MQ=255)
gTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTcg > 2:2943401/1‑93 (MQ=255)
gTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTcg > 1:4161557/1‑93 (MQ=255)
ttCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTcgc > 1:2758057/1‑93 (MQ=255)
tctcAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTcgcg > 1:1141143/1‑93 (MQ=255)
ctcAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGt > 1:1807575/1‑93 (MQ=255)
ctcAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGt < 1:6163255/93‑1 (MQ=255)
cAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCa > 2:4609699/1‑93 (MQ=255)
aaaaGCAACTTCTATTGCCGCCACCAGGATGAGGGAAGCGATGTGACGGCAACAACAGAGTATCGGGGCGAGATGGTCGATTATTCGCGTCAc < 2:58347/93‑1 (MQ=255)
aaaaGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCAc < 2:6118746/93‑1 (MQ=255)
aaGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGc < 1:6353194/93‑1 (MQ=255)
aGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGcc < 2:6009869/93‑1 (MQ=255)
aGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGcc < 2:2438491/93‑1 (MQ=255)
aaCTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTc < 2:5587603/93‑1 (MQ=255)
aCTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTcc > 2:3162553/1‑93 (MQ=255)
cTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCt > 1:5816328/1‑93 (MQ=255)
cTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCt < 1:6064537/93‑1 (MQ=255)
cTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCt < 1:4545388/93‑1 (MQ=255)
tCTGTTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTtc > 2:1715712/1‑93 (MQ=255)
tCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCTGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTtc < 1:4053828/93‑1 (MQ=255)
tCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTtc < 1:2258302/93‑1 (MQ=255)
tCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTtc < 1:6023387/93‑1 (MQ=255)
cTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTtct > 1:2328485/1‑93 (MQ=255)
tATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTtctc > 1:6273348/1‑93 (MQ=255)
tATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTtctc > 1:5660416/1‑93 (MQ=255)
tATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTtctc < 1:3162978/93‑1 (MQ=255)
ttACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTCgg > 2:5712783/1‑93 (MQ=255)
ttACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTCgg < 1:2354942/93‑1 (MQ=255)
tACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTCGGc < 1:5177770/93‑1 (MQ=255)
tACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTCGGCagtagt < 1:1288468/93‑1 (MQ=255)
|
TTATTACGCGCCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTCGGCAGTAGT > NC_000913/2610028‑2610210
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTTTATTACGCGCCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTCGGCAGTAGTG > NC_000913/2610026‑2610211
|
CTTTATTACGCGCCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCA > SRR4302537.3716620/1‑94 (MQ=60)
TTATTACGCGCCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACC > SRR4302537.2628536/1‑94 (MQ=60)
ACGCGCCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGAT < SRR4302537.4322202/94‑1 (MQ=60)
GCGCCTTCATCCCTCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGA < SRR4302537.4316899/94‑1 (MQ=60)
CGCCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGAT > SRR4302537.3528241/1‑94 (MQ=60)
CGCCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGAT > SRR4302537.3486890/1‑94 (MQ=60)
GCCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATG < SRR4302537.4648332/94‑1 (MQ=60)
CCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGG > SRR4302537.2559759/1‑94 (MQ=60)
CCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGG > SRR4302537.5584328/1‑94 (MQ=60)
CCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGG < SRR4302537.4768763/94‑1 (MQ=60)
CCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGG > SRR4302537.3131381/1‑94 (MQ=60)
CCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGG < SRR4302537.5272736/94‑1 (MQ=60)
CCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGG > SRR4302537.3081519/1‑94 (MQ=60)
CCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGG < SRR4302537.6268093/94‑1 (MQ=60)
CATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGC > SRR4302537.5666917/1‑94 (MQ=60)
CATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGC > SRR4302537.5834249/1‑94 (MQ=60)
CATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGC > SRR4302537.488468/1‑94 (MQ=60)
CATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGC < SRR4302537.1761570/94‑1 (MQ=60)
ATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCG > SRR4302537.328299/1‑94 (MQ=60)
ATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCG > SRR4302537.1007208/1‑94 (MQ=60)
GCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTG < SRR4302537.1856433/94‑1 (MQ=60)
GCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTG < SRR4302537.3704430/94‑1 (MQ=60)
GCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTG > SRR4302537.1054040/1‑94 (MQ=60)
GCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACG < SRR4302537.287214/94‑1 (MQ=60)
GCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACG > SRR4302537.1033008/1‑94 (MQ=60)
CGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGC < SRR4302537.327863/94‑1 (MQ=60)
CGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGC > SRR4302537.1994550/1‑94 (MQ=60)
GCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCA > SRR4302537.2519709/1‑94 (MQ=60)
GCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCA < SRR4302537.3163958/94‑1 (MQ=60)
CGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAAC < SRR4302537.6100794/94‑1 (MQ=60)
GCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACA > SRR4302537.6463604/1‑94 (MQ=60)
CGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAAC < SRR4302537.5703438/94‑1 (MQ=60)
CGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAAC > SRR4302537.1777534/1‑94 (MQ=60)
GTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACA > SRR4302537.1199253/1‑94 (MQ=60)
TCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGA < SRR4302537.67324/94‑1 (MQ=60)
TAGCCCGGTACAACTTATTGAACCGCATGTTCTCAAAAGCAACTTCGATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAG < SRR4302537.6036838/94‑1 (MQ=60)
CAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAG < SRR4302537.788427/94‑1 (MQ=60)
CAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAG < SRR4302537.1973360/94‑1 (MQ=60)
CAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAG > SRR4302537.2773858/1‑94 (MQ=60)
CAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAG < SRR4302537.4928464/94‑1 (MQ=60)
AGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGT < SRR4302537.5697554/94‑1 (MQ=60)
AGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGT < SRR4302537.5609966/94‑1 (MQ=60)
GCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTA < SRR4302537.2451427/94‑1 (MQ=60)
CCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTAT > SRR4302537.2714786/1‑94 (MQ=60)
CCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTAT < SRR4302537.1121522/94‑1 (MQ=60)
CCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATC > SRR4302537.1657361/1‑94 (MQ=60)
CCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATC > SRR4302537.4267130/1‑94 (MQ=60)
CGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCA > SRR4302537.5764036/1‑94 (MQ=60)
CGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCA > SRR4302537.3685281/1‑94 (MQ=60)
GGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAG < SRR4302537.2305303/94‑1 (MQ=60)
TACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGG < SRR4302537.4100546/94‑1 (MQ=60)
TACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGG > SRR4302537.970047/1‑94 (MQ=60)
ACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAG > SRR4302537.4912793/1‑94 (MQ=60)
ACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAG > SRR4302537.430784/1‑94 (MQ=60)
ACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAG > SRR4302537.2369953/1‑94 (MQ=60)
CTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGA > SRR4302537.3873147/1‑94 (MQ=60)
TTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGAT < SRR4302537.4142424/94‑1 (MQ=60)
TATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATG < SRR4302537.849699/94‑1 (MQ=60)
TATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATG > SRR4302537.1308455/1‑94 (MQ=60)
TATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATG > SRR4302537.4430645/1‑94 (MQ=60)
TTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAGCAACAGAGTATCAGGGCGAGATGGT > SRR4302537.6290933/1‑94 (MQ=60)
TTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGT < SRR4302537.3521201/94‑1 (MQ=60)
TGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTC < SRR4302537.6141256/94‑1 (MQ=60)
GAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCG < SRR4302537.3929595/94‑1 (MQ=60)
GAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCG < SRR4302537.2075087/94‑1 (MQ=60)
AACTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGA < SRR4302537.4410854/94‑1 (MQ=60)
CTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATT > SRR4302537.411190/1‑94 (MQ=60)
CTGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATT < SRR4302537.4685871/94‑1 (MQ=60)
TGCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTA > SRR4302537.4391097/1‑94 (MQ=60)
GCATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTAT > SRR4302537.3029226/1‑94 (MQ=60)
CATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATT < SRR4302537.1384436/94‑1 (MQ=60)
CATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATT < SRR4302537.5672487/94‑1 (MQ=60)
CATGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATT < SRR4302537.2457645/94‑1 (MQ=60)
TGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCG > SRR4302537.4190621/1‑94 (MQ=60)
TGTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCG < SRR4302537.3322942/94‑1 (MQ=60)
GTTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGC > SRR4302537.2777310/1‑94 (MQ=60)
TTCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCG > SRR4302537.1149071/1‑94 (MQ=60)
TCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGT > SRR4302537.1820187/1‑94 (MQ=60)
TCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGT > SRR4302537.3867058/1‑94 (MQ=60)
TCTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGT > SRR4302537.4856378/1‑94 (MQ=60)
CTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTC > SRR4302537.1917099/1‑94 (MQ=60)
CTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTC < SRR4302537.6205673/94‑1 (MQ=60)
CTCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTC > SRR4302537.1682684/1‑94 (MQ=60)
TCAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCA < SRR4302537.3212927/94‑1 (MQ=60)
CAAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGCATCAGGGCGAGATGGTCGATTATTCGCGTCAC > SRR4302537.5229265/1‑94 (MQ=60)
AAAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACG > SRR4302537.1837037/1‑94 (MQ=60)
AAAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGC > SRR4302537.1992192/1‑94 (MQ=60)
AAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCC < SRR4302537.6396566/94‑1 (MQ=60)
AAGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCC > SRR4302537.423637/1‑94 (MQ=60)
AGCAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCG > SRR4302537.4618284/1‑94 (MQ=60)
CAACTTCTATTACCGCTACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTC > SRR4302537.4482870/1‑94 (MQ=60)
CAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTC < SRR4302537.4944682/94‑1 (MQ=60)
CAACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTC > SRR4302537.2966587/1‑94 (MQ=60)
AACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCC < SRR4302537.1624033/94‑1 (MQ=60)
ACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCT < SRR4302537.5410099/94‑1 (MQ=60)
ACTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCT > SRR4302537.5856197/1‑94 (MQ=60)
CTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTT < SRR4302537.4576846/94‑1 (MQ=60)
CTTCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTT < SRR4302537.6106204/94‑1 (MQ=60)
TCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCTGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCT < SRR4302537.4082169/94‑1 (MQ=60)
TCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCT < SRR4302537.6064771/94‑1 (MQ=60)
TCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCT < SRR4302537.2274238/94‑1 (MQ=60)
TCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCT > SRR4302537.2344907/1‑94 (MQ=60)
TCTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCT < SRR4302537.5587805/94‑1 (MQ=60)
CTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTC > SRR4302537.5699153/1‑94 (MQ=60)
CTATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTC > SRR4302537.6316396/1‑94 (MQ=60)
TATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTCG < SRR4302537.3185185/94‑1 (MQ=60)
ATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTCGG > SRR4302537.949834/1‑94 (MQ=60)
ATTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTCGG > SRR4302537.637170/1‑94 (MQ=60)
ATTACCGCCACCATAATAATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCTAGATGGTCAATTATTCGCGTCACGCCGTCCTTCTCGG < SRR4302537.3372933/94‑1 (MQ=60)
TTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCTGTCCTTCTCGGA > SRR4302537.975427/1‑94 (MQ=60)
TTACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTCGGC < SRR4302537.2371546/94‑1 (MQ=60)
TACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTCGGCA < SRR4302537.5213404/94‑1 (MQ=60)
TACCGCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTCGGCA > SRR4302537.286650/1‑94 (MQ=60)
GCCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTCGGCAGTAG < SRR4302537.1805579/94‑1 (MQ=60)
CCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTCGGCAGTAGT < SRR4302537.791710/94‑1 (MQ=60)
CCACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTCGGCAGTAGT < SRR4302537.1287117/94‑1 (MQ=60)
TACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTCGGCAGTAGTG < SRR4302537.1297431/94‑1 (MQ=60)
CACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTCGGCAGTAGTG > SRR4302537.4047443/1‑94 (MQ=60)
CACCATGAAGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTCGGCAGTAGTG > SRR4302537.2655281/1‑94 (MQ=60)
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CTTTATTACGCGCCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTCGGCAGTAGTG > NC_000913/2610026‑2610211
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
