Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,622,267 |
T→C |
L402L (TTA→CTA) |
ppk → |
polyphosphate kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,622,267 | 0 | T | C | 100.0%
| 731.1
/ NA
| 206 | L402L (TTA→CTA) | ppk | polyphosphate kinase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (89/117); total (89/117) |
Only 100 of 209 total aligned reads displayed.
AACATTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGTTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGG > NC_000913/2622177‑2622356
|
aaCATTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTa > 1:1202884/1‑93 (MQ=255)
aCATTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAGCGGTAAGAAAGTCACCGTGGTGGTTGAGCTAc < 1:5949213/93‑1 (MQ=255)
aCATTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTaa > 2:3540939/1‑92 (MQ=255)
cATTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACa < 1:5779784/93‑1 (MQ=255)
cATTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACa < 1:5108501/93‑1 (MQ=255)
cATTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACa > 2:6129241/1‑93 (MQ=255)
cATTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACa < 2:580023/93‑1 (MQ=255)
aTTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAg < 2:5507862/93‑1 (MQ=255)
aTTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAg < 1:1690619/93‑1 (MQ=255)
aTTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAg > 2:4318035/1‑93 (MQ=255)
tttACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGCAAGTCACCGTGGTGGTTGAGCTACAgg > 2:2201637/1‑93 (MQ=255)
tACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGgcg > 2:2916513/1‑93 (MQ=255)
cgcgTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGt < 1:4033287/93‑1 (MQ=255)
cgTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGttt < 1:2409055/93‑1 (MQ=255)
cgTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGttt < 2:2127331/93‑1 (MQ=255)
gTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTc < 1:1126646/93‑1 (MQ=255)
gTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTc > 2:3215245/1‑93 (MQ=255)
gTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTc < 1:3880404/93‑1 (MQ=255)
tGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTcg > 1:1406419/1‑93 (MQ=255)
tGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTcg > 2:1663023/1‑93 (MQ=255)
ggCAAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTcga < 2:5618066/93‑1 (MQ=255)
gCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTcgac < 2:401274/93‑1 (MQ=255)
gAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTcgacga > 1:3312183/1‑93 (MQ=255)
gAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTcgacga > 2:4155559/1‑93 (MQ=255)
gAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTcgacga < 1:177348/93‑1 (MQ=255)
aGATTCACGCATCATCGACTCGATGAGCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACgaaga < 1:4979942/93‑1 (MQ=255)
aTTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGaagaag > 1:4596465/1‑93 (MQ=255)
aTTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGaagaag > 1:6176247/1‑93 (MQ=255)
ttCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGc > 2:3811556/1‑93 (MQ=255)
tCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGcc < 2:2280992/93‑1 (MQ=255)
tCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGcc < 2:4663555/93‑1 (MQ=255)
cACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCa > 1:405205/1‑93 (MQ=255)
aCGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCaa < 1:655090/93‑1 (MQ=255)
gCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACa > 2:5063619/1‑93 (MQ=255)
catcatCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACAt < 2:1314190/93‑1 (MQ=255)
catcatCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACAt < 1:4113398/93‑1 (MQ=255)
atcatcGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACAtt < 2:4525087/93‑1 (MQ=255)
tcatcGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTc > 2:4412854/1‑93 (MQ=255)
tcatcGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTc > 1:4586026/1‑93 (MQ=255)
catcGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCa < 1:3693874/93‑1 (MQ=255)
atcGACTCGATGATCCACGCCGCACATAACGTTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCAc < 2:3311625/93‑1 (MQ=255)
atcGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCAc < 2:2251419/93‑1 (MQ=255)
atcGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAAAATTCAc > 1:103710/1‑93 (MQ=255)
atcGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTAAAGGCGCGTTTCGACGAAGAAGCCAACATTCAc > 2:762978/1‑93 (MQ=255)
cGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTg < 2:190517/93‑1 (MQ=255)
gACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTgg < 2:5629028/93‑1 (MQ=255)
tCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCg > 1:3197663/1‑93 (MQ=255)
gatgatCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGaa < 1:1262410/93‑1 (MQ=255)
gatgatCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGaa < 2:5047572/93‑1 (MQ=255)
atgatCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAg < 1:325129/93‑1 (MQ=255)
tgatCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAgc > 1:2518225/1‑93 (MQ=255)
tCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGcc < 2:3976327/93‑1 (MQ=255)
tCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGcc < 2:2831860/93‑1 (MQ=255)
tCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGcc < 2:2664070/93‑1 (MQ=255)
tCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGcc > 1:2117791/1‑93 (MQ=255)
ccACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCt > 1:5529060/1‑93 (MQ=255)
ccACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCt < 1:754079/93‑1 (MQ=255)
ccACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTCGGCGAAGCGCCt < 2:5170756/93‑1 (MQ=255)
aCGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGa > 2:1868245/1‑93 (MQ=255)
cgccgcACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGAc < 2:447356/93‑1 (MQ=255)
cgccgcACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGAc < 1:4668366/93‑1 (MQ=255)
gccgcACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGAcc > 1:5387129/1‑93 (MQ=255)
cgcACATAACGGTAAGAAAGTCACCGTGGTGGTTTAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGa > 1:195340/1‑93 (MQ=255)
cgcACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGa > 2:1741842/1‑93 (MQ=255)
gcACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGaa > 1:4086557/1‑93 (MQ=255)
gcACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGaa < 2:5295441/93‑1 (MQ=255)
ccacaTAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTGTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGaa < 2:4900867/92‑1 (MQ=255)
cacaTAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAg > 2:5964706/1‑93 (MQ=255)
cacaTAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAg < 1:961795/93‑1 (MQ=255)
acaTAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGc < 1:1655928/93‑1 (MQ=255)
acaTAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGc < 2:5122496/93‑1 (MQ=255)
acaTAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGc > 1:2874609/1‑93 (MQ=255)
acaTAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGc < 1:4179956/93‑1 (MQ=255)
tAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAgg < 1:6263932/93‑1 (MQ=255)
tAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAgg < 2:2401022/93‑1 (MQ=255)
tAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAACacg > 1:6389519/1‑91 (MQ=255)
aaCGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGc < 1:3025786/93‑1 (MQ=255)
aaCGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGc < 2:686981/93‑1 (MQ=255)
cGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGt < 1:6102281/93‑1 (MQ=255)
ggTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTg < 2:3498643/93‑1 (MQ=255)
ggTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTg < 2:1572798/93‑1 (MQ=255)
gTAAGAAAGTCTCCGTGGTGGTTGAGCTACAGTCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGc < 2:3096529/93‑1 (MQ=255)
gTAAGAAAGTCGCCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGc < 1:1548597/93‑1 (MQ=255)
tAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCa < 2:2302167/93‑1 (MQ=255)
gAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGt < 2:126954/93‑1 (MQ=255)
aaGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTa < 2:6366101/93‑1 (MQ=255)
aaGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAACAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCGCGTTa > 1:137739/1‑93 (MQ=255)
aGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTAt < 2:2978799/93‑1 (MQ=255)
aGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTAt < 1:5711922/93‑1 (MQ=255)
gTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTAtc < 1:3264281/93‑1 (MQ=255)
cGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTtctc < 2:4075325/93‑1 (MQ=255)
cGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTtctc < 2:3745617/93‑1 (MQ=255)
cGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTtctc < 1:6020235/93‑1 (MQ=255)
cGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTtctc > 1:5306037/1‑93 (MQ=255)
gtggtgGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTctct < 2:842665/93‑1 (MQ=255)
ggtggtTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTgc < 1:4946153/93‑1 (MQ=255)
gtggtTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTgcg < 2:4855352/93‑1 (MQ=255)
ttGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCgg < 2:6433186/93‑1 (MQ=255)
tGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCggg < 1:3799494/93‑1 (MQ=255)
gAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCgggg > 1:5815384/1‑93 (MQ=255)
|
AACATTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGTTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGG > NC_000913/2622177‑2622356
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTAACATTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGTTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTG > NC_000913/2622175‑2622359
|
TTAACATTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCT < SRR4302537.2892479/94‑1 (MQ=60)
TAACATTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTA > SRR4302537.1211249/1‑94 (MQ=60)
AACATTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTAC > SRR4302537.5057112/1‑94 (MQ=60)
AACATTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTAC > SRR4302537.3592211/1‑94 (MQ=60)
ACATTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAGCGGTAAGAAAGTCACCGTGGTGGTTGAGCTACA < SRR4302537.5990052/94‑1 (MQ=60)
CATTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAG < SRR4302537.5143703/94‑1 (MQ=60)
CATTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAG < SRR4302537.5819396/94‑1 (MQ=60)
ATTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGG < SRR4302537.1702454/94‑1 (MQ=60)
TTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGC < SRR4302537.6333222/94‑1 (MQ=60)
TTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGC < SRR4302537.6421856/94‑1 (MQ=60)
CGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTT < SRR4302537.4061514/94‑1 (MQ=60)
CGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTT > SRR4302537.6118900/1‑94 (MQ=60)
CGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTTGTTGAGCTACAGGCGCGTTTC < SRR4302537.5235451/94‑1 (MQ=60)
CGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTC < SRR4302537.2426015/94‑1 (MQ=60)
GTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCG > SRR4302537.1416212/1‑94 (MQ=60)
GTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCG < SRR4302537.1134457/94‑1 (MQ=60)
GTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCG < SRR4302537.3907545/94‑1 (MQ=60)
GGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGAC > SRR4302537.866880/1‑94 (MQ=60)
CGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGA > SRR4302537.3335615/1‑94 (MQ=60)
GAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAA > SRR4302537.5426990/1‑94 (MQ=60)
GAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAA < SRR4302537.178608/94‑1 (MQ=60)
AAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGA > SRR4302537.5635461/1‑94 (MQ=60)
AAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGA < SRR4302537.6301023/94‑1 (MQ=60)
AGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAA > SRR4302537.4981351/1‑94 (MQ=60)
AGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAA > SRR4302537.1423941/1‑94 (MQ=60)
AGATTCACGCATCATCGACTCGATGAGCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAA < SRR4302537.5014263/94‑1 (MQ=60)
GATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAG > SRR4302537.4628278/1‑94 (MQ=60)
GATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAG < SRR4302537.5791672/94‑1 (MQ=60)
GATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAG > SRR4302537.6218784/1‑94 (MQ=60)
ATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGC < SRR4302537.4622619/94‑1 (MQ=60)
ATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGC > SRR4302537.1860760/1‑94 (MQ=60)
TTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCC < SRR4302537.2470724/94‑1 (MQ=60)
TTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCC < SRR4302537.3252857/94‑1 (MQ=60)
TCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCA < SRR4302537.6191897/94‑1 (MQ=60)
TCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCA > SRR4302537.408015/1‑94 (MQ=60)
ACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAAC < SRR4302537.659554/94‑1 (MQ=60)
CATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATT < SRR4302537.4142136/94‑1 (MQ=60)
CATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATT < SRR4302537.276059/94‑1 (MQ=60)
ATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTC > SRR4302537.4617749/1‑94 (MQ=60)
ATCATCGACTAGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTC > SRR4302537.1697641/1‑94 (MQ=60)
TCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCA > SRR4302537.4690057/1‑94 (MQ=60)
CATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCAC < SRR4302537.3719868/94‑1 (MQ=60)
CATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCAC > SRR4302537.3861952/1‑94 (MQ=60)
CATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAAAATTCAC > SRR4302537.104458/1‑94 (MQ=60)
ATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACT < SRR4302537.5975489/94‑1 (MQ=60)
ATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGCGGTTGCGCTACAGGCGCGTTTCGACGAAGAAGCCAAAATTCACT > SRR4302537.3283522/1‑94 (MQ=60)
CTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCG > SRR4302537.3220152/1‑94 (MQ=60)
GATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAG < SRR4302537.1271190/94‑1 (MQ=60)
ATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGC > SRR4302537.2535915/1‑94 (MQ=60)
ATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGC < SRR4302537.327384/94‑1 (MQ=60)
TGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCG > SRR4302537.3919491/1‑94 (MQ=60)
GATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGC > SRR4302537.2020303/1‑94 (MQ=60)
ATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCTCC > SRR4302537.1255723/1‑94 (MQ=60)
ATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCC > SRR4302537.2132705/1‑94 (MQ=60)
TCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCT > SRR4302537.5566806/1‑94 (MQ=60)
TCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCT < SRR4302537.5991682/94‑1 (MQ=60)
CCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTG < SRR4302537.740699/94‑1 (MQ=60)
CCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTG < SRR4302537.759219/94‑1 (MQ=60)
CGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACC < SRR4302537.4700664/94‑1 (MQ=60)
CGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACC > SRR4302537.2402560/1‑94 (MQ=60)
CGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACC > SRR4302537.4134852/1‑94 (MQ=60)
CGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACC > SRR4302537.5423947/1‑94 (MQ=60)
CCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTTAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGA > SRR4302537.196727/1‑94 (MQ=60)
CCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGA > SRR4302537.1400882/1‑94 (MQ=60)
CGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAA > SRR4302537.4115090/1‑94 (MQ=60)
CACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGC < SRR4302537.968434/94‑1 (MQ=60)
CACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGC > SRR4302537.2894784/1‑94 (MQ=60)
CACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGC > SRR4302537.1146312/1‑94 (MQ=60)
ACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCA < SRR4302537.1667534/94‑1 (MQ=60)
ACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCA < SRR4302537.4209133/94‑1 (MQ=60)
CATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAG > SRR4302537.4103780/1‑94 (MQ=60)
ATAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAacacg > SRR4302537.6433055/1‑89 (MQ=60)
TAACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGC < SRR4302537.6306930/94‑1 (MQ=60)
AACGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCG < SRR4302537.3046880/94‑1 (MQ=60)
CGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTG > SRR4302537.4202428/1‑94 (MQ=60)
CGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTG < SRR4302537.6144207/94‑1 (MQ=60)
CGGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTG > SRR4302537.5828196/1‑94 (MQ=60)
GGTAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGC < SRR4302537.1616585/94‑1 (MQ=60)
GTAAGAAAGTCGCCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCA < SRR4302537.1559405/94‑1 (MQ=60)
TAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCAC < SRR4302537.450574/94‑1 (MQ=60)
TAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCAC < SRR4302537.1313227/94‑1 (MQ=60)
TAAGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCAC < SRR4302537.3006770/94‑1 (MQ=60)
AGAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGT < SRR4302537.5231382/94‑1 (MQ=60)
AAAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTT < SRR4302537.5382962/94‑1 (MQ=60)
AAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTA < SRR4302537.494031/94‑1 (MQ=60)
AAAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAACAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCGCGTTA > SRR4302537.138727/1‑94 (MQ=60)
AAGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCCCGTTAT > SRR4302537.4074730/1‑94 (MQ=60)
AGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATC < SRR4302537.3094457/94‑1 (MQ=60)
AGTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATC < SRR4302537.5751018/94‑1 (MQ=60)
GTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCT < SRR4302537.3287305/94‑1 (MQ=60)
GTCACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCT < SRR4302537.3294039/94‑1 (MQ=60)
ACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCT > SRR4302537.1718152/1‑94 (MQ=60)
ACCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCT > SRR4302537.1088449/1‑94 (MQ=60)
CCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTC < SRR4302537.3763251/94‑1 (MQ=60)
CCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTC < SRR4302537.6566/94‑1 (MQ=60)
CCGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTC > SRR4302537.5342502/1‑94 (MQ=60)
CGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCT < SRR4302537.6061595/94‑1 (MQ=60)
CGTGGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCT < SRR4302537.2249753/94‑1 (MQ=60)
GGTGGTTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCG < SRR4302537.4980258/94‑1 (MQ=60)
TTGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGG < SRR4302537.4051090/94‑1 (MQ=60)
TGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGG > SRR4302537.5855249/1‑94 (MQ=60)
TGAGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGG < SRR4302537.3826153/94‑1 (MQ=60)
AGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCT < SRR4302537.172030/94‑1 (MQ=60)
AGCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCT < SRR4302537.4745875/94‑1 (MQ=60)
GCTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTG > SRR4302537.5314048/1‑94 (MQ=60)
|
TTAACATTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGTTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTG > NC_000913/2622175‑2622359
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
