Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,673,821 |
C→T |
intergenic (‑7/+26) |
yphC ← / ← yphD |
putative oxidoreductase/putative transport system permease protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,673,821 | 0 | C | T | 98.9%
| 624.8
/ ‑3.1
| 176 | intergenic (‑7/+26) | yphC/yphD | putative oxidoreductase/putative transport system permease protein |
| Reads supporting (aligned to +/- strand): ref base C (2/0); new base T (99/75); total (101/75) |
| Fisher's exact test for biased strand distribution p-value = 5.08e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.03e-01 |
Only 100 of 186 total aligned reads displayed.
CAGATCGACGGTCGAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCCGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGCCACCACGATG > NC_000913/2673731‑2673910
|
aTCGACGGTCGAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCAcc > 2:5814730/1‑93 (MQ=255)
cGACGGTCGAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCcg < 1:4076426/93‑1 (MQ=255)
gACGGTCGAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCcgc > 2:4138722/1‑93 (MQ=255)
cGGTCGAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCcgccc < 2:5135737/93‑3 (MQ=255)
cGGTCGAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCgcgc > 2:949619/1‑93 (MQ=255)
cGGTCGAATTTCCAGGTAAATAATCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCgcgc < 1:817666/93‑1 (MQ=255)
gTCGAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCa > 2:2498339/1‑93 (MQ=255)
tCGAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAg > 1:2580994/1‑93 (MQ=255)
tCGAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAg < 1:3748740/93‑1 (MQ=255)
cGAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCCCCCGCGCCAgg < 2:3730941/93‑1 (MQ=255)
cGAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAgg < 1:4544360/93‑1 (MQ=255)
gAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAggg > 1:6146388/1‑93 (MQ=255)
gAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAggg > 1:1147414/1‑93 (MQ=255)
aaTTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAgggg > 1:4919288/1‑93 (MQ=255)
aaTTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAgggg < 1:3344315/93‑1 (MQ=255)
tttCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCg > 1:1258669/1‑93 (MQ=255)
tttCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCg > 2:2503107/1‑93 (MQ=255)
tttCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCg < 2:4424115/93‑1 (MQ=255)
tttCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCg > 1:3405773/1‑93 (MQ=255)
tCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATATGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGtt > 2:2533446/1‑93 (MQ=255)
tCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGtt > 2:3114061/1‑93 (MQ=255)
tGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAg > 2:2803203/1‑93 (MQ=255)
gTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGt > 1:1360484/1‑93 (MQ=255)
tAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGtt < 2:201210/93‑1 (MQ=255)
aTAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAg > 1:6005855/1‑93 (MQ=255)
aTAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCACGGGCGCTAACGTTTAg > 2:4176659/1‑93 (MQ=255)
tAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGc < 2:1050134/93‑1 (MQ=255)
tAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGc > 1:6206757/1‑93 (MQ=255)
aGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGt < 1:264909/93‑1 (MQ=255)
gCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGtt < 1:3899500/93‑1 (MQ=255)
gCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGtt < 1:4535784/93‑1 (MQ=255)
tGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTc < 1:4415803/93‑1 (MQ=255)
tGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTc > 1:3240900/1‑93 (MQ=255)
tGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTc < 1:944341/93‑1 (MQ=255)
ccAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGc < 2:1949472/93‑1 (MQ=255)
aGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCtt > 2:666386/1‑93 (MQ=255)
acATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTCCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCttt < 1:2160300/92‑1 (MQ=255)
aTCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTAc < 1:3841483/93‑1 (MQ=255)
aTCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTAc > 1:2237103/1‑93 (MQ=255)
tCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACt < 2:5501374/93‑1 (MQ=255)
tCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACt < 2:4269477/93‑1 (MQ=255)
tCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACt < 1:3674794/93‑1 (MQ=255)
tCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACt > 2:3391225/1‑93 (MQ=255)
ttttCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCt > 1:3566335/1‑93 (MQ=255)
ttttCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGCTTAGCGTTTCGCTTTACTGCt > 2:5874116/1‑93 (MQ=255)
tttCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCtt < 2:6277405/93‑1 (MQ=255)
tttCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCtt > 1:5544830/1‑93 (MQ=255)
ttCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCttg > 2:1437886/1‑92 (MQ=255)
ttCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTc > 2:2448473/1‑93 (MQ=255)
ttCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTCACTGCTTc < 2:6326722/93‑1 (MQ=255)
tCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCg > 1:2419158/1‑93 (MQ=255)
tCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCg < 1:661973/93‑1 (MQ=255)
tCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCg > 1:5888939/1‑93 (MQ=255)
cATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGc > 2:5636790/1‑93 (MQ=255)
cATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGc > 2:4352615/1‑93 (MQ=255)
aTAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCt < 1:2704722/93‑1 (MQ=255)
aTAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCt < 2:1881490/93‑1 (MQ=255)
tAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTg < 2:894403/93‑1 (MQ=255)
tAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTg > 2:5883960/1‑93 (MQ=255)
aaaTCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTgg < 2:350176/93‑1 (MQ=255)
aaaTCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTgg > 2:4725273/1‑93 (MQ=255)
aaTCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTggg > 1:3652264/1‑93 (MQ=255)
aaTCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGGTTAGCGTTTCGCTTTACTGCTTCGCTggg > 1:3761994/1‑93 (MQ=255)
ccTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAg > 2:6156383/1‑93 (MQ=255)
cTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGc < 2:2585022/93‑1 (MQ=255)
cTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGc < 2:3334540/93‑1 (MQ=255)
tCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCa > 1:5122664/1‑93 (MQ=255)
aTTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAg > 2:509973/1‑93 (MQ=255)
aTTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAg > 2:1594805/1‑93 (MQ=255)
ttAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGa > 1:3182159/1‑93 (MQ=255)
ttAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGa < 1:1603467/93‑1 (MQ=255)
aaCAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGata > 2:4789441/1‑93 (MQ=255)
aCAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGatat < 1:5312987/93‑1 (MQ=255)
aCAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGatat > 2:3937198/1‑93 (MQ=255)
aCAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGatat > 1:53462/1‑93 (MQ=255)
aCAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGatat < 2:3195447/93‑1 (MQ=255)
cAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATAtt < 1:5580655/93‑1 (MQ=255)
aTACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCg > 2:1647408/1‑93 (MQ=255)
cGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCa < 1:5717849/93‑1 (MQ=255)
cGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCa < 2:4596319/93‑1 (MQ=255)
gATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAg > 1:5081849/1‑93 (MQ=255)
gATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGATAAGGTTTAGCGTTTCGCTTTACTGCTTTGCTGGGTCAGCAAGATATTCGCCAg > 2:2405105/1‑93 (MQ=255)
aTTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGc > 1:4894122/1‑93 (MQ=255)
aTTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGc > 2:1779066/1‑93 (MQ=255)
ttAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGACAGCa > 1:1279993/1‑93 (MQ=255)
ttAATTTTCATCCCTGCCGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCa > 1:6393194/1‑93 (MQ=255)
tAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCAc < 2:1811034/93‑1 (MQ=255)
aaTTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCAcc > 1:5981058/1‑93 (MQ=255)
aTTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCg > 1:5388609/1‑93 (MQ=255)
ttCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGcca > 2:4750604/1‑93 (MQ=255)
aTCCCTGCTGCACCCGCGCCAGGGGCGGTAAGGGTTAGCGTTTCGCTTTACTGCTTAGCTGGGTCAGCAAGATATTCGCCAGCACCGccacca > 1:4518653/1‑93 (MQ=255)
tCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGCcaccac > 1:4372799/1‑93 (MQ=255)
ccTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGCCACCACga > 2:360880/1‑93 (MQ=255)
ccTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGCCACCACga > 2:1919990/1‑93 (MQ=255)
ccTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGCCACCACga > 2:149895/1‑93 (MQ=255)
ctgctgCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGCCACCACgat < 1:1649020/93‑1 (MQ=255)
ctgctgCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGCCACCACgat > 1:2938817/1‑93 (MQ=255)
ctgctgCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGCCACCACgat > 1:3523624/1‑93 (MQ=255)
tgctgcACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGCCACCACgatg > 2:5265440/1‑93 (MQ=255)
tgctgcACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGCCACCACgatg > 1:694758/1‑93 (MQ=255)
|
CAGATCGACGGTCGAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCCGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGCCACCACGATG > NC_000913/2673731‑2673910
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGATCGACGGTCGAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCCGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGCCACCACGATGATGA > NC_000913/2673731‑2673914
|
CAGATCGACGGTCGAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCA > SRR4302537.4948144/1‑94 (MQ=60)
CAGATCGACGGTCGAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCA < SRR4302537.2677804/94‑1 (MQ=60)
GATCGACGGTCGAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACC > SRR4302537.5471532/1‑94 (MQ=60)
CGACGGTCGAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGC < SRR4302537.4104889/94‑1 (MQ=60)
CGACGGTCGAATTTCCTGGTAAATAAGCTGCCAGCATCGGTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGC > SRR4302537.791330/1‑94 (MQ=60)
CGGTCGAATTTCCAGGTAAATAATCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCC < SRR4302537.823283/94‑1 (MQ=60)
GTCGAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAG > SRR4302537.2599063/1‑94 (MQ=60)
TCGAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGG < SRR4302537.3775067/94‑1 (MQ=60)
CGAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGG > SRR4302537.6188662/1‑94 (MQ=60)
CGAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGG < SRR4302537.1555619/94‑1 (MQ=60)
CGAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGG < SRR4302537.1972303/94‑1 (MQ=60)
CGAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGG < SRR4302537.4575810/94‑1 (MQ=60)
CGAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGG > SRR4302537.1155392/1‑94 (MQ=60)
GAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGG > SRR4302537.4953222/1‑94 (MQ=60)
AATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGC < SRR4302537.1285132/94‑1 (MQ=60)
AATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGC < SRR4302537.3367990/94‑1 (MQ=60)
ATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCG > SRR4302537.1267427/1‑94 (MQ=60)
ATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCG > SRR4302537.3429894/1‑94 (MQ=60)
TTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTT < SRR4302537.6081968/94‑1 (MQ=60)
TTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTT > SRR4302537.4570416/1‑94 (MQ=60)
TCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTA < SRR4302537.5686285/94‑1 (MQ=60)
GGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGT > SRR4302537.1369962/1‑94 (MQ=60)
AATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAG < SRR4302537.2190989/94‑1 (MQ=60)
AATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAG > SRR4302537.6047116/1‑94 (MQ=60)
AATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAG < SRR4302537.3371483/94‑1 (MQ=60)
ATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGC > SRR4302537.6249525/1‑94 (MQ=60)
ATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGC > SRR4302537.4122967/1‑94 (MQ=60)
ATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGA > SRR4302537.6249524/1‑94 (MQ=60)
TAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCG < SRR4302537.4634024/94‑1 (MQ=60)
AAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGT > SRR4302537.3945278/1‑94 (MQ=60)
AGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTT < SRR4302537.266770/94‑1 (MQ=60)
GCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTT < SRR4302537.3926761/94‑1 (MQ=60)
GCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTT < SRR4302537.4567185/94‑1 (MQ=60)
CTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTC > SRR4302537.3263741/1‑94 (MQ=60)
CTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTC > SRR4302537.1290300/1‑94 (MQ=60)
TGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCG < SRR4302537.4446289/94‑1 (MQ=60)
TGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCG < SRR4302537.950865/94‑1 (MQ=60)
CCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCT < SRR4302537.3211128/94‑1 (MQ=60)
CCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCT < SRR4302537.3695076/94‑1 (MQ=60)
GCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTA < SRR4302537.5151093/94‑1 (MQ=60)
ACATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTCCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTA < SRR4302537.2175529/94‑1 (MQ=60)
CATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTAC > SRR4302537.587425/1‑94 (MQ=60)
CATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTAC > SRR4302537.2252881/1‑94 (MQ=60)
ATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACT < SRR4302537.3868390/94‑1 (MQ=60)
TCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTG < SRR4302537.3700642/94‑1 (MQ=60)
TCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTG < SRR4302537.3549315/94‑1 (MQ=60)
CGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGC > SRR4302537.2613373/1‑94 (MQ=60)
GTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCT > SRR4302537.3591484/1‑94 (MQ=60)
GTTTTCATAAATCCCTCATTAACAATACGACTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCT > SRR4302537.5595816/1‑94 (MQ=60)
TTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTT > SRR4302537.5582690/1‑94 (MQ=60)
TTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCG > SRR4302537.5929345/1‑94 (MQ=60)
TTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCG > SRR4302537.2436208/1‑94 (MQ=60)
TCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGC < SRR4302537.666479/94‑1 (MQ=60)
CATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCT < SRR4302537.5385241/94‑1 (MQ=60)
CATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCT < SRR4302537.933700/94‑1 (MQ=60)
CATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCT > SRR4302537.5988053/1‑94 (MQ=60)
ATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTG < SRR4302537.2723603/94‑1 (MQ=60)
ATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTG < SRR4302537.3649151/94‑1 (MQ=60)
AAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGG > SRR4302537.3677973/1‑94 (MQ=60)
AAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGG > SRR4302537.643421/1‑94 (MQ=60)
AAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGGTTAGCGTTTCGCTTTACTGCTTCGCTGGG > SRR4302537.3788410/1‑94 (MQ=60)
CCTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGC < SRR4302537.5247086/94‑1 (MQ=60)
CTCATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCA > SRR4302537.5157971/1‑94 (MQ=60)
ATTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGA > SRR4302537.3204523/1‑94 (MQ=60)
TTAACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGAT < SRR4302537.1614674/94‑1 (MQ=60)
AACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATAT > SRR4302537.496697/1‑94 (MQ=60)
AACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATAT > SRR4302537.3070955/1‑94 (MQ=60)
AACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATAT > SRR4302537.53856/1‑94 (MQ=60)
ACAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATT < SRR4302537.5349474/94‑1 (MQ=60)
CAATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTC < SRR4302537.5618794/94‑1 (MQ=60)
ATACGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGC > SRR4302537.1630412/1‑94 (MQ=60)
TAAGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCC < SRR4302537.6515518/94‑1 (MQ=60)
CGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAG < SRR4302537.5756982/94‑1 (MQ=60)
CGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAG > SRR4302537.3903149/1‑94 (MQ=60)
CGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAG < SRR4302537.258831/94‑1 (MQ=60)
CGATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAG > SRR4302537.5116829/1‑94 (MQ=60)
GATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGC > SRR4302537.4927918/1‑94 (MQ=60)
ATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCA > SRR4302537.680182/1‑94 (MQ=60)
ATTAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGACAGCA > SRR4302537.1288890/1‑94 (MQ=60)
ATTAATTTTCATCCCTGCCGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCA > SRR4302537.6436740/1‑94 (MQ=60)
TAATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACC > SRR4302537.6022111/1‑94 (MQ=60)
AATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCG > SRR4302537.5425432/1‑94 (MQ=60)
AATTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCG < SRR4302537.3505790/94‑1 (MQ=60)
ATTTTCATCCCTGCCGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGC > SRR4302537.3726910/1‑94 (MQ=60)
TTTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGCC > SRR4302537.2873054/1‑94 (MQ=60)
TTTCATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGCCA > SRR4302537.447808/1‑94 (MQ=60)
CATCCCTGCTGCACCCGCGCCAGGGGCGGTAAGGGTTAGCGTTTCGCTTTACTGCTTAGCTGGGTCAGCAAGATATTCGCCAGCACCGCCACCA > SRR4302537.4549910/1‑94 (MQ=60)
ATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGCCACCAC > SRR4302537.4433026/1‑94 (MQ=60)
ATCCCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGCCACCAC > SRR4302537.4403009/1‑94 (MQ=60)
CCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGCCACCACGAT > SRR4302537.3548553/1‑94 (MQ=60)
CCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGCCACCACGAT > SRR4302537.3832101/1‑94 (MQ=60)
CCTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGCCACCACGAT > SRR4302537.2959448/1‑94 (MQ=60)
CTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGCCACCACGATG > SRR4302537.699523/1‑94 (MQ=60)
CTGCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGCCACCACGATG < SRR4302537.1660592/94‑1 (MQ=60)
GCTGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGCCACCACGATGAT < SRR4302537.2726198/94‑1 (MQ=60)
TGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGCCACCACGATGATGA > SRR4302537.3713684/1‑94 (MQ=60)
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CAGATCGACGGTCGAATTTCCTGGTAAATAAGCTGCCAGCATCGTTTTCATAAATCCCTCATTAACAATACGATTAATTTTCATCCCTGCCGCACCCGCGCCAGGGGCGTTAAGGTTTAGCGTTTCGCTTTACTGCTTCGCTGGGTCAGCAAGATATTCGCCAGCACCGCCACCACGATGATGA > NC_000913/2673731‑2673914
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
