Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,676,851 |
A→G |
R179R (CGT→CGC) |
yphF ← |
putative LACI‑type transcriptional regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,676,851 | 0 | A | G | 100.0%
| 788.1
/ NA
| 226 | R179R (CGT→CGC) | yphF | putative LACI‑type transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (111/115); total (111/115) |
Only 100 of 229 total aligned reads displayed.
GGAAATCGCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGGC > NC_000913/2676761‑2676940
|
gAAATCGCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGt > 1:3849978/1‑93 (MQ=255)
gAAATCGCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGt > 2:3630843/1‑93 (MQ=255)
gAAATCGCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGt > 2:1420623/1‑93 (MQ=255)
aaaTCGCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTc < 1:3102868/93‑1 (MQ=255)
aaTCGCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCg > 1:5414979/1‑93 (MQ=255)
aTCGCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGc > 1:631685/1‑93 (MQ=255)
cGCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTg < 1:861638/93‑1 (MQ=255)
gCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGc > 2:4589478/1‑93 (MQ=255)
gCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGc > 2:3387649/1‑93 (MQ=255)
cTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGca > 2:6431307/1‑93 (MQ=255)
tttATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGcac > 2:1698231/1‑93 (MQ=255)
ttATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGcaca < 1:2480930/93‑1 (MQ=255)
tATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGcacac > 2:1178577/1‑93 (MQ=255)
tCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACaa > 1:105552/1‑93 (MQ=255)
tCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACaa > 1:2727402/1‑93 (MQ=255)
tCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACaa > 1:2168376/1‑93 (MQ=255)
cTAAACCAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACaaa < 2:5563163/93‑1 (MQ=255)
aaaaCAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACt < 1:4889769/93‑1 (MQ=255)
aaaCAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACtt > 2:3588306/1‑93 (MQ=255)
aaCAGTCCCTTCCTGATTATCGACAATTTGCGCTCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTc > 2:3759239/1‑93 (MQ=255)
aaCAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTc > 1:1408746/1‑93 (MQ=255)
aCAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCa > 2:50370/1‑93 (MQ=255)
aGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCaaa < 1:6454035/93‑1 (MQ=255)
aGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCaaa < 1:4236880/93‑1 (MQ=255)
gTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAg > 2:5149765/1‑93 (MQ=255)
gTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAg > 1:3594681/1‑93 (MQ=255)
gTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAg < 1:1659191/93‑1 (MQ=255)
gTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAg > 2:4221806/1‑93 (MQ=255)
cccTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGc > 1:3483581/1‑93 (MQ=255)
cccTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGc > 1:3363539/1‑93 (MQ=255)
cccTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGc > 1:2731459/1‑93 (MQ=255)
ccTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCt > 1:2856334/1‑93 (MQ=255)
ttCCTGGTTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTc < 2:1598987/93‑1 (MQ=255)
tCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCg > 2:116022/1‑93 (MQ=255)
tCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCg > 2:4170526/1‑93 (MQ=255)
ccTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGc > 1:6142558/1‑93 (MQ=255)
tGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCaa < 1:342865/93‑1 (MQ=255)
gATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAAt > 2:1059313/1‑93 (MQ=255)
gATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAAt < 1:3999397/93‑1 (MQ=255)
gATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAAt < 2:284985/93‑1 (MQ=255)
ttAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAAtta < 1:4755699/93‑2 (MQ=255)
tAGCGACAATTCGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATtga < 2:5113703/93‑1 (MQ=255)
cGACAATTTGCGCGCCGGGAACTCGGGATTGTAAATCTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATtgatga < 1:2085755/93‑1 (MQ=255)
cGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATtgatga < 1:1913772/93‑1 (MQ=255)
gACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGAc < 2:2483909/93‑1 (MQ=255)
gACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGAc > 1:3248734/1‑93 (MQ=255)
aCAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACg > 2:4376976/1‑93 (MQ=255)
aCAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACg > 1:387106/1‑93 (MQ=255)
cAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACgg < 2:594815/93‑1 (MQ=255)
aaTTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGc < 2:5837675/93‑1 (MQ=255)
aaTTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGACTTCGCAATTGATGACGGc > 2:872134/1‑93 (MQ=255)
tttGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCaa > 1:6299842/1‑93 (MQ=255)
tGCTCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAAtt < 2:206186/93‑1 (MQ=255)
tGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAAtt < 1:300965/93‑1 (MQ=255)
tGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAAtt < 2:4953718/93‑1 (MQ=255)
tGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAAtt < 2:1975769/93‑1 (MQ=255)
gcgcCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTc > 2:2558565/1‑93 (MQ=255)
cgcCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCg < 2:4130110/93‑1 (MQ=255)
gcCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCgg > 2:3026561/1‑93 (MQ=255)
ccGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGc < 2:1363443/93‑1 (MQ=255)
cGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCt < 1:5359674/93‑1 (MQ=255)
gggAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTg > 1:5950668/1‑93 (MQ=255)
ggAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTgg < 2:6095137/93‑1 (MQ=255)
ggAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTgg > 1:5610334/1‑93 (MQ=255)
ggAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAACGCTTCGCAATTGATGACGGCAATTTTCGGCTgg > 1:3549177/1‑93 (MQ=255)
cgcgGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCaa > 1:1822128/1‑93 (MQ=255)
gcgGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAAt < 1:4483723/93‑1 (MQ=255)
gcgGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAAt > 2:6030766/1‑93 (MQ=255)
cgGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAAtt < 1:2779951/93‑1 (MQ=255)
cgGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAAtt < 2:5197240/93‑1 (MQ=255)
gATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTa < 1:4397157/93‑1 (MQ=255)
aTTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTAt > 1:5733588/1‑93 (MQ=255)
ttttAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTAtt < 1:255342/93‑1 (MQ=255)
ttttAAAACTTCTTCAAATCCTTTGCGGCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTAtt < 1:266421/93‑1 (MQ=255)
tttAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTg < 1:2298366/93‑1 (MQ=255)
ttAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTgg > 1:1579906/1‑93 (MQ=255)
aaaaCTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCa < 2:3440548/93‑1 (MQ=255)
aaaaCTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCa > 1:3299904/1‑93 (MQ=255)
aaaCTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCaa < 1:6254284/93‑1 (MQ=255)
ttcttcAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCaataaa > 2:4078075/1‑93 (MQ=255)
ttcttcAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCaataaa > 1:522040/1‑93 (MQ=255)
tcttcAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCaataaaa > 1:1253205/1‑93 (MQ=255)
tcttcAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCaataaaa < 2:2400714/93‑1 (MQ=255)
cttcAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCaataaaat < 2:703064/93‑1 (MQ=255)
tcAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCaataaaataa > 1:5799555/1‑93 (MQ=255)
tcAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCaataaaataa < 2:5993791/93‑1 (MQ=255)
tcAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCaataaaataa < 1:5662622/93‑1 (MQ=255)
cAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAaataat < 2:3118867/93‑1 (MQ=255)
aaaTCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATc < 2:448655/93‑1 (MQ=255)
aaaTCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATc < 2:4689181/93‑1 (MQ=255)
aaaTCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATc > 2:5594857/1‑93 (MQ=255)
aaTCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCa < 2:3928092/93‑1 (MQ=255)
aaTCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCa < 1:3967043/93‑1 (MQ=255)
aTCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAg < 2:379384/93‑1 (MQ=255)
tCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGc < 1:69278/93‑1 (MQ=255)
tCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGc > 2:14923/1‑93 (MQ=255)
tCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGc < 1:4878573/93‑1 (MQ=255)
tCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGc < 1:2577443/93‑1 (MQ=255)
ccTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCg < 2:3915096/93‑1 (MQ=255)
ccTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCg < 1:3070639/93‑1 (MQ=255)
|
GGAAATCGCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGGC > NC_000913/2676761‑2676940
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AACGGAAATCGCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGGCAGCG > NC_000913/2676758‑2676944
|
AACGGAAATCGCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTG > SRR4302537.5492594/1‑94 (MQ=60)
AACGGAAATCGCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTC < SRR4302537.2488553/94‑1 (MQ=60)
CGGAAATCGCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCG < SRR4302537.2325625/94‑1 (MQ=60)
CGGAAATCGCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCG > SRR4302537.234350/1‑94 (MQ=60)
GGAAATCGCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGT > SRR4302537.3876938/1‑94 (MQ=60)
AAATCGCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCG > SRR4302537.5451899/1‑94 (MQ=60)
AAATCGCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCG < SRR4302537.3124536/94‑1 (MQ=60)
AAATCGCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCG < SRR4302537.3124535/94‑1 (MQ=60)
AATCGCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGC > SRR4302537.635979/1‑94 (MQ=60)
ATCGCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGTT > SRR4302537.5425298/1‑94 (MQ=60)
CGCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGC < SRR4302537.867543/94‑1 (MQ=60)
CTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCAC > SRR4302537.1272519/1‑94 (MQ=60)
TTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACA > SRR4302537.34221/1‑94 (MQ=60)
TTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACAC < SRR4302537.2498369/94‑1 (MQ=60)
TATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACA > SRR4302537.772012/1‑94 (MQ=60)
ATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAA > SRR4302537.2746446/1‑94 (MQ=60)
ATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAA > SRR4302537.3385341/1‑94 (MQ=60)
ATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAA > SRR4302537.106313/1‑94 (MQ=60)
ATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAA > SRR4302537.2183650/1‑94 (MQ=60)
ATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAA < SRR4302537.1507199/94‑1 (MQ=60)
CTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAAC > SRR4302537.5770059/1‑94 (MQ=60)
AAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTT > SRR4302537.44331/1‑94 (MQ=60)
AAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTT < SRR4302537.4923535/94‑1 (MQ=60)
AAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTC > SRR4302537.1418560/1‑94 (MQ=60)
AACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCA < SRR4302537.6352675/94‑1 (MQ=60)
AACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCA > SRR4302537.5791691/1‑94 (MQ=60)
ACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAA > SRR4302537.3292968/1‑94 (MQ=60)
CAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAA < SRR4302537.5467832/94‑1 (MQ=60)
AGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAG > SRR4302537.1174517/1‑94 (MQ=60)
AGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAG > SRR4302537.3620021/1‑94 (MQ=60)
AGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAG < SRR4302537.4266353/94‑1 (MQ=60)
AGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAG < SRR4302537.6497788/94‑1 (MQ=60)
GTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGG < SRR4302537.1670823/94‑1 (MQ=60)
TCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGC > SRR4302537.3508224/1‑94 (MQ=60)
TCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGC > SRR4302537.2750526/1‑94 (MQ=60)
TCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGC > SRR4302537.3387361/1‑94 (MQ=60)
TCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGC > SRR4302537.3083454/1‑94 (MQ=60)
CCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCT > SRR4302537.2876362/1‑94 (MQ=60)
TCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGC > SRR4302537.6184793/1‑94 (MQ=60)
CCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCA < SRR4302537.1647451/94‑1 (MQ=60)
TGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCCAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAAT < SRR4302537.3476571/94‑1 (MQ=60)
TGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAAT < SRR4302537.345246/94‑1 (MQ=60)
GATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATT < SRR4302537.4027397/94‑1 (MQ=60)
ATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTG < SRR4302537.605977/94‑1 (MQ=60)
ATTAGCGACAATTTGCGCGCAGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTG < SRR4302537.279971/94‑1 (MQ=60)
TTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTAA < SRR4302537.4788554/94‑1 (MQ=60)
CGACAATTTGCGCGCCGGGAACTCGGGATTGTAAATCTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGAC < SRR4302537.2100459/94‑1 (MQ=60)
CGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGAC < SRR4302537.2693299/94‑1 (MQ=60)
CGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGAC > SRR4302537.3271631/1‑94 (MQ=60)
CGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGAC < SRR4302537.1927055/94‑1 (MQ=60)
GACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACG > SRR4302537.389781/1‑94 (MQ=60)
CAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGC < SRR4302537.416338/94‑1 (MQ=60)
ATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAA > SRR4302537.6342988/1‑94 (MQ=60)
TTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAAT < SRR4302537.5653975/94‑1 (MQ=60)
TTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATT < SRR4302537.35885/94‑1 (MQ=60)
TGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTT < SRR4302537.3883796/94‑1 (MQ=60)
TGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTT < SRR4302537.303063/94‑1 (MQ=60)
GCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCG < SRR4302537.2957608/94‑1 (MQ=60)
GCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCG < SRR4302537.3918227/94‑1 (MQ=60)
GCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCG < SRR4302537.2957609/94‑1 (MQ=60)
GCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGC < SRR4302537.371069/94‑1 (MQ=60)
GCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGCCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGC < SRR4302537.4830780/94‑1 (MQ=60)
GCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCATCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGC < SRR4302537.4722988/94‑1 (MQ=60)
CGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTG > SRR4302537.4697690/1‑94 (MQ=60)
CGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTG < SRR4302537.2688435/94‑1 (MQ=60)
CGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTG > SRR4302537.5991518/1‑94 (MQ=60)
CGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTG < SRR4302537.5396375/94‑1 (MQ=60)
GGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGG > SRR4302537.5648692/1‑94 (MQ=60)
GGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAACGCTTCGCAATTGATGACGGCAATTTTCGGCTGG > SRR4302537.3574246/1‑94 (MQ=60)
GGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTCTCGGCTGGT < SRR4302537.3106184/94‑1 (MQ=60)
GAACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTC > SRR4302537.5658528/1‑94 (MQ=60)
AACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCA < SRR4302537.6347813/94‑1 (MQ=60)
AACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCA < SRR4302537.4060000/94‑1 (MQ=60)
ACGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAA > SRR4302537.1834830/1‑94 (MQ=60)
CGCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAAT < SRR4302537.3535735/94‑1 (MQ=60)
GCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATT < SRR4302537.2758245/94‑1 (MQ=60)
GCGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATT < SRR4302537.4514740/94‑1 (MQ=60)
CGGGATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTT < SRR4302537.2799391/94‑1 (MQ=60)
GATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTAT > SRR4302537.1749721/1‑94 (MQ=60)
GATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTAT > SRR4302537.5772842/1‑94 (MQ=60)
GATTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTAT < SRR4302537.4427495/94‑1 (MQ=60)
TTTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTG < SRR4302537.257153/94‑1 (MQ=60)
TTTTAAAACTTCTTCAAATCCTTTGCGGCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTG < SRR4302537.268292/94‑1 (MQ=60)
TTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGG < SRR4302537.6436233/94‑1 (MQ=60)
TTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGG < SRR4302537.2314589/94‑1 (MQ=60)
TTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGG > SRR4302537.800221/1‑94 (MQ=60)
TTTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGG > SRR4302537.1590946/1‑94 (MQ=60)
TTAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGC > SRR4302537.1852971/1‑94 (MQ=60)
TAAAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCA > SRR4302537.3323236/1‑94 (MQ=60)
AAACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAAT < SRR4302537.6297247/94‑1 (MQ=60)
AACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGTAATA > SRR4302537.2594011/1‑94 (MQ=60)
AACTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATA < SRR4302537.6340860/94‑1 (MQ=60)
CTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAA > SRR4302537.503353/1‑94 (MQ=60)
CTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAA > SRR4302537.525628/1‑94 (MQ=60)
CTTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAA > SRR4302537.3268759/1‑94 (MQ=60)
TTCTTCAAATCCTTTGCGTCGCTGCACACAAGCTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAA < SRR4302537.2540215/94‑1 (MQ=60)
TTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAA > SRR4302537.5338941/1‑94 (MQ=60)
TTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAA > SRR4302537.1261924/1‑94 (MQ=60)
TTCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAA > SRR4302537.1951454/1‑94 (MQ=60)
TCTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAAT < SRR4302537.199642/94‑1 (MQ=60)
CTTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATA < SRR4302537.2135562/94‑1 (MQ=60)
TTCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAA > SRR4302537.5839316/1‑94 (MQ=60)
TCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAAT < SRR4302537.4408643/94‑1 (MQ=60)
TCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAAT > SRR4302537.2746490/1‑94 (MQ=60)
TCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAAT < SRR4302537.4000565/94‑1 (MQ=60)
TCAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAAT < SRR4302537.5701368/94‑1 (MQ=60)
CAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATC > SRR4302537.669185/1‑94 (MQ=60)
CAAATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATC > SRR4302537.3467897/1‑94 (MQ=60)
AATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAG < SRR4302537.3994804/94‑1 (MQ=60)
AATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAG > SRR4302537.4923415/1‑94 (MQ=60)
AATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAG > SRR4302537.2543035/1‑94 (MQ=60)
AATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATAAG > SRR4302537.4972146/1‑94 (MQ=60)
ATCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGC < SRR4302537.2216465/94‑1 (MQ=60)
TCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCG < SRR4302537.2595487/94‑1 (MQ=60)
TCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCG < SRR4302537.4912275/94‑1 (MQ=60)
TCCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCG < SRR4302537.69785/94‑1 (MQ=60)
CCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGG > SRR4302537.1630071/1‑94 (MQ=60)
CCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGG < SRR4302537.3092034/94‑1 (MQ=60)
CCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGG > SRR4302537.5982427/1‑94 (MQ=60)
CCTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGG > SRR4302537.2678943/1‑94 (MQ=60)
CTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGGC > SRR4302537.6209084/1‑94 (MQ=60)
CTTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGGC < SRR4302537.5870629/94‑1 (MQ=60)
TTTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGGCA < SRR4302537.384803/94‑1 (MQ=60)
TTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGGCAG < SRR4302537.1009758/94‑1 (MQ=60)
TTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGGCAG < SRR4302537.5406496/94‑1 (MQ=60)
TTGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGGCAG < SRR4302537.5077079/94‑1 (MQ=60)
TGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATGAGCGGCAGC > SRR4302537.5477759/1‑94 (MQ=60)
TGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGGCAGC > SRR4302537.3827542/1‑94 (MQ=60)
TGCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGGCAGC < SRR4302537.5808860/94‑1 (MQ=60)
GCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGGCAGCG < SRR4302537.6455298/94‑1 (MQ=60)
GCGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGGCAGCG > SRR4302537.1412819/1‑94 (MQ=60)
|
AACGGAAATCGCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGGCAGCG > NC_000913/2676758‑2676944
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
