Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,750,008 |
T→C |
C65R (TGC→CGC) |
recN → |
RecN |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,750,008 | 0 | T | C | 97.2%
| 694.9
/ 6.3
| 213 | C65R (TGC→CGC) | recN | RecN |
| Reads supporting (aligned to +/- strand): ref base T (3/3); new base C (93/114); total (96/117) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.97e-01 |
Only 100 of 227 total aligned reads displayed.
AAATCTATTGCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGTGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCTTCGT > NC_000913/2749918‑2750097
|
aaTCTATTGCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGcgcg > 1:4594266/1‑93 (MQ=255)
aTCTATTGCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTgcgcgc > 2:3873227/1‑93 (MQ=255)
tCTATTGCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGcc > 1:3013116/1‑93 (MQ=255)
tCTATTGCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGcc > 1:798036/1‑93 (MQ=255)
tCTATTGCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGAGCTGCTCGCGCTGACCTGCGCGcc > 1:4712707/1‑93 (MQ=255)
tATTGCAAAAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCg > 2:6326874/1‑93 (MQ=255)
tGCAATAGATGCCCTCGGTCTTTGTCTCGGGGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑ttt < 1:4381397/93‑1 (MQ=255)
gtaaTAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑tttt < 1:6103523/91‑1 (MQ=255)
aaTAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTtc < 2:5647908/93‑1 (MQ=255)
aaTAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTtc < 2:3608794/93‑1 (MQ=255)
aaTAGATGCCCTCGGTCTTAGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTtc > 2:6310713/1‑93 (MQ=255)
tAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTtctc < 2:5771784/93‑1 (MQ=255)
gATGCCCTGGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTg > 2:6368280/1‑93 (MQ=255)
gATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGTGCGCCCG‑TTTTTCTCTg > 1:1658828/1‑93 (MQ=255)
gATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTg > 1:290166/1‑93 (MQ=255)
cccTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAg > 2:6022446/1‑93 (MQ=255)
cccTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAg < 1:1313990/93‑1 (MQ=255)
ccTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGa < 1:5708824/93‑1 (MQ=255)
ccTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGa > 1:1482106/1‑93 (MQ=255)
ccTCGGTCTTTGTCTCGGTGGTCGCCCTGAAGCCGACATGGTGCGTACCGGCCCCGCTCGCGCCGACCTGCGCGCCCG‑TTTTTCTCTGAAAGa > 2:2059210/1‑93 (MQ=255)
cTCGGTCTTTGTGTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGAt < 1:2514813/93‑1 (MQ=255)
cTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGAt > 1:6239979/1‑93 (MQ=255)
cTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGAt > 1:5822511/1‑93 (MQ=255)
cTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTAGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGAt > 1:2299480/1‑93 (MQ=255)
cTCGGTCTTTGTCTCGCTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGAt < 1:3045759/93‑1 (MQ=255)
tCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATa < 1:4299642/93‑1 (MQ=255)
cGGTCTTTGTCTCGGTGGTCGGGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATAc < 2:4312840/93‑1 (MQ=255)
gTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGc > 1:969071/1‑93 (MQ=255)
tCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGcc > 2:1904192/1‑93 (MQ=255)
tCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGcc > 1:61687/1‑93 (MQ=255)
tttGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGTGCGCCCG‑TTTTTCTCTGAAAGATACGCCAg > 1:3370051/1‑93 (MQ=255)
tttGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAg < 2:5199644/93‑1 (MQ=255)
tttGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAg < 2:4989835/93‑1 (MQ=255)
tttGTCTCGGTGGTCGCCGTGTCGCCAACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAg > 2:2136426/1‑93 (MQ=255)
ttGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGc > 1:374474/1‑93 (MQ=255)
tGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCg > 1:1598384/1‑93 (MQ=255)
tcGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGctc < 1:2339745/93‑1 (MQ=255)
tcGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGctc > 1:4106786/1‑93 (MQ=255)
tcGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGctc > 1:3562739/1‑93 (MQ=255)
tcGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGctc < 1:3154369/93‑1 (MQ=255)
ggtggtCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTg < 2:3272111/93‑1 (MQ=255)
gggggtCGCTCTGAGGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTg < 2:699951/90‑1 (MQ=255)
gtggtCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTgc > 2:4814495/1‑93 (MQ=255)
gggtCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTgcg < 1:1016890/92‑1 (MQ=255)
tCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGTGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCgctg < 1:5602728/93‑1 (MQ=255)
gcTGAAGCCGACATGGTGCGTCCCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCgctggctg < 2:3731287/93‑1 (MQ=255)
gcTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCgctggctg < 1:1628144/93‑1 (MQ=255)
gcTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCgctggctg < 1:731509/93‑1 (MQ=255)
tGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGga > 1:2017091/1‑93 (MQ=255)
gAAGCCGACATGGTGGGTCCCGGCGCTGCTCCCGCTGGCCTGCGCGCCCG‑TTTTTCTCTTAAAGATACGCCAGCGGCTCTGCGCTGGCTGgaa < 1:2714717/93‑1 (MQ=255)
gAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGgaa < 2:1811082/93‑1 (MQ=255)
aGCCGACATGGTGCGTACCTGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGgaaga < 2:5303878/93‑1 (MQ=255)
aGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGgaaga < 1:5950729/93‑1 (MQ=255)
ccGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGaaa < 1:1448794/93‑1 (MQ=255)
aCATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAAcc < 1:3061625/93‑1 (MQ=255)
aCATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAAca > 1:1379377/1‑92 (MQ=255)
aTGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAg > 1:5368167/1‑93 (MQ=255)
tGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGc < 2:593192/93‑1 (MQ=255)
ggTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCt < 2:1228059/93‑1 (MQ=255)
tGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCGTTTTTTCTCTGAAGGATAGGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCtt > 1:872042/1‑93 (MQ=255)
tGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTg < 1:2404296/93‑1 (MQ=255)
gCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGa < 1:5181282/93‑1 (MQ=255)
gCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGa > 2:1170257/1‑93 (MQ=255)
gTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAg > 1:3769297/1‑93 (MQ=255)
gTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAg < 2:1754757/93‑1 (MQ=255)
tACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGa < 2:2823947/93‑1 (MQ=255)
tACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGa < 1:2044451/93‑1 (MQ=255)
aCCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGAc < 2:5683694/93‑1 (MQ=255)
ccGGCGCTGCTCGCGCTGTCCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACg < 2:403655/93‑1 (MQ=255)
ccGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACg > 2:770595/1‑93 (MQ=255)
cGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACgg > 1:2157929/1‑93 (MQ=255)
cGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACgg < 2:4050793/93‑1 (MQ=255)
cGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACgg > 2:6084786/1‑93 (MQ=255)
cGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACgg < 2:583990/93‑1 (MQ=255)
cGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACgg < 2:5446777/93‑1 (MQ=255)
gcgcTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGc > 2:3967630/1‑93 (MQ=255)
gcgcTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGc > 1:2573718/1‑93 (MQ=255)
gcgcTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGc < 1:1943359/93‑1 (MQ=255)
gcgcTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGc > 2:4187154/1‑93 (MQ=255)
cgcTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCa < 2:5716996/93‑1 (MQ=255)
ctgctCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATg > 2:429163/1‑93 (MQ=255)
tgctCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGa > 2:2605903/1‑93 (MQ=255)
cctCGCGCGACCCTGCGCGCCCT‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGaa < 2:581520/92‑1 (MQ=255)
tCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATg < 2:1350760/93‑1 (MQ=255)
cgcgCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGt < 1:463351/93‑1 (MQ=255)
gcgcTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGtt > 1:2469420/1‑93 (MQ=255)
cgcTGACCTGTGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGttt < 1:330509/93‑1 (MQ=255)
cgcTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGttt < 1:3803019/93‑1 (MQ=255)
cgcTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGttt < 1:5229154/93‑1 (MQ=255)
cTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGc > 2:4934322/1‑93 (MQ=255)
cTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGc < 2:1625263/93‑1 (MQ=255)
tGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCt > 2:2325700/1‑93 (MQ=255)
tGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCt < 2:4706284/93‑1 (MQ=255)
aCCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCTtc < 2:3205566/93‑1 (MQ=255)
aCCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCTtc < 2:3683258/93‑1 (MQ=255)
ccTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCTtcg > 1:4890883/1‑93 (MQ=255)
ccTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCTtcg < 1:4490020/93‑1 (MQ=255)
cTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCTtcgt < 1:5851054/93‑1 (MQ=255)
cTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCTtcgt < 2:4408742/93‑1 (MQ=255)
cTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACCGGCATGAATGTTTGCTtcgt > 2:509141/1‑93 (MQ=255)
|
AAATCTATTGCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGTGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCTTCGT > NC_000913/2749918‑2750097
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGTAAATCTATTGCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGTGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCTTCGTCGCG > NC_000913/2749915‑2750101
|
GGTAAATCTATTGCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGC > SRR4302537.1846617/1‑94 (MQ=60)
GTAAATCTATTGCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCG > SRR4302537.2892981/1‑94 (MQ=60)
GTAAATCTATTGCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCG < SRR4302537.338802/94‑1 (MQ=60)
GTAAATCTATTGCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCG > SRR4302537.1691164/1‑94 (MQ=60)
GTAAATCTATTGCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCG < SRR4302537.4681592/94‑1 (MQ=60)
TAAATCTATTGCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGC < SRR4302537.4963472/94‑1 (MQ=60)
TAAATCTATTGCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGC > SRR4302537.1044623/1‑94 (MQ=60)
AAATCTATTGCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCG > SRR4302537.4626043/1‑94 (MQ=60)
ATCTATTGCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCC > SRR4302537.803515/1‑94 (MQ=60)
ATCTATTGCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCC > SRR4302537.3034124/1‑94 (MQ=60)
ATCTATTGCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGAGCTGCTCGCGCTGACCTGCGCGCC > SRR4302537.4745306/1‑94 (MQ=60)
CTATTGCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATTGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG > SRR4302537.5230345/1‑94 (MQ=60)
CTATTGCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG > SRR4302537.859415/1‑94 (MQ=60)
TTGCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTT < SRR4302537.5443226/94‑1 (MQ=60)
TGCAATAGATGCCCTCGGTCTTTGTCTCGGGGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTT < SRR4302537.4411636/94‑1 (MQ=60)
GTAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTT < SRR4302537.6145460/94‑1 (MQ=60)
GCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTT < SRR4302537.2486024/94‑1 (MQ=60)
CAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTC > SRR4302537.3812530/1‑94 (MQ=60)
CAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTC > SRR4302537.2588525/1‑94 (MQ=60)
AATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCT < SRR4302537.3394254/94‑1 (MQ=60)
ATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTC > SRR4302537.440649/1‑94 (MQ=60)
AGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGTGCGCCCG‑TTTTTCTCTG > SRR4302537.1670455/1‑94 (MQ=60)
AGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTG > SRR4302537.292185/1‑94 (MQ=60)
AGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGAGCTGACCTGCGCGCCCG‑CTTTTCTCTG > SRR4302537.5270603/1‑94 (MQ=60)
GATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGA > SRR4302537.2102610/1‑94 (MQ=60)
TCCCTCGGGCTTTGTCTCGGTGGTCGCGATGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAG < SRR4302537.1508721/94‑1 (MQ=60)
CCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGA < SRR4302537.1323139/94‑1 (MQ=60)
CCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGA < SRR4302537.339227/94‑1 (MQ=60)
CCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGA > SRR4302537.1492415/1‑94 (MQ=60)
CCCTCGGTCTTTGTCTCGGGGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCCCTGGTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGA > SRR4302537.4350383/1‑94 (MQ=60)
CCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGAT < SRR4302537.5747890/94‑1 (MQ=60)
CCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGAT > SRR4302537.6282879/1‑94 (MQ=60)
CCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGAT < SRR4302537.2436794/94‑1 (MQ=60)
CCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGAT > SRR4302537.5862414/1‑94 (MQ=60)
CCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTAGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGAT > SRR4302537.2315710/1‑94 (MQ=60)
CTCGGTCTTTGTGTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATA < SRR4302537.2532486/94‑1 (MQ=60)
CTCGGTCTTTGTCTCGCTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATA < SRR4302537.3066976/94‑1 (MQ=60)
TCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATAC < SRR4302537.4329521/94‑1 (MQ=60)
GGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGC > SRR4302537.975752/1‑94 (MQ=60)
GGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGC > SRR4302537.993770/1‑94 (MQ=60)
GTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCC > SRR4302537.62147/1‑94 (MQ=60)
GTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCC < SRR4302537.2225629/94‑1 (MQ=60)
TCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCA < SRR4302537.4603741/94‑1 (MQ=60)
CTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGTGCGCCCG‑TTTTTCTCTGAAAGATACGCCAG > SRR4302537.3393931/1‑94 (MQ=60)
CTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGTGCGCCCG‑TTTTTCTCTGAAAGATACGCCAG > SRR4302537.4284187/1‑94 (MQ=60)
CTTTGTATCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAG > SRR4302537.3051399/1‑94 (MQ=60)
TTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGC < SRR4302537.1970388/94‑1 (MQ=60)
TTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGC > SRR4302537.377072/1‑94 (MQ=60)
TTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCG < SRR4302537.4766016/94‑1 (MQ=60)
TTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCG > SRR4302537.1609553/1‑94 (MQ=60)
TGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGG < SRR4302537.5969964/94‑1 (MQ=60)
TGTCGCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGG < SRR4302537.4116830/94‑1 (MQ=60)
GTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGC > SRR4302537.4656965/1‑94 (MQ=60)
TCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCT < SRR4302537.3070910/94‑1 (MQ=60)
CTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTC > SRR4302537.4135476/1‑94 (MQ=60)
CTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTC > SRR4302537.3587868/1‑94 (MQ=60)
TCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCT < SRR4302537.3176516/94‑1 (MQ=60)
TCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCT < SRR4302537.2356235/94‑1 (MQ=60)
CGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTG > SRR4302537.6202397/1‑94 (MQ=60)
CGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTG < SRR4302537.6507061/94‑1 (MQ=60)
GGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGTGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGC < SRR4302537.2737120/94‑1 (MQ=60)
GGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGC < SRR4302537.1486599/94‑1 (MQ=60)
GGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGC < SRR4302537.1023891/94‑1 (MQ=60)
GGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCT < SRR4302537.3242414/94‑1 (MQ=60)
GTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTG < SRR4302537.1326114/94‑1 (MQ=60)
TCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGTGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGG < SRR4302537.5641032/94‑1 (MQ=60)
GCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGCAAGATACGCCAGCGGCTCTGCGCTGCCTGG > SRR4302537.1477238/1‑94 (MQ=60)
GCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATCCGCCAGCGGCTCTGCGCTGGCTGG < SRR4302537.3784119/94‑1 (MQ=60)
GCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGG < SRR4302537.736501/94‑1 (MQ=60)
GCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGG < SRR4302537.1639526/94‑1 (MQ=60)
GCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGG < SRR4302537.913580/94‑1 (MQ=60)
CTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGA > SRR4302537.2031153/1‑94 (MQ=60)
TGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAA < SRR4302537.2704190/94‑1 (MQ=60)
GAAGCCGACATGGTGGGTCCCGGCGCTGCTCCCGCTGGCCTGCGCGCCCG‑TTTTTCTCTTAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAG < SRR4302537.2733673/94‑1 (MQ=60)
GAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAG > SRR4302537.3158376/1‑94 (MQ=60)
GAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAG < SRR4302537.2297550/94‑1 (MQ=60)
AGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAA < SRR4302537.5991579/94‑1 (MQ=60)
GCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAA > SRR4302537.4678803/1‑94 (MQ=60)
GCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAA < SRR4302537.1663731/94‑1 (MQ=60)
CCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAA < SRR4302537.5646566/94‑1 (MQ=60)
CCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAA < SRR4302537.1458887/94‑1 (MQ=60)
GACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACC < SRR4302537.5768021/94‑1 (MQ=60)
GACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACC < SRR4302537.884040/94‑1 (MQ=60)
GACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACC < SRR4302537.6000100/94‑1 (MQ=60)
GACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACC < SRR4302537.5278365/94‑1 (MQ=60)
GACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACC > SRR4302537.3470714/1‑94 (MQ=60)
GACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACA > SRR4302537.1389005/1‑94 (MQ=60)
ACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCA > SRR4302537.1429803/1‑94 (MQ=60)
ACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCA < SRR4302537.3082958/94‑1 (MQ=60)
CATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGCAAGATACGCCAGCGGCTCTGCGCTTGCTGGAAGAAAACCAG > SRR4302537.1907118/1‑94 (MQ=60)
CATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAG > SRR4302537.5404897/1‑94 (MQ=60)
ATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGC < SRR4302537.5526452/94‑1 (MQ=60)
GTGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCGTTTTTTCTCTGAAGGATAGGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTT > SRR4302537.878037/1‑94 (MQ=60)
TGCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGA < SRR4302537.2421220/94‑1 (MQ=60)
GCGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAA < SRR4302537.5216935/94‑1 (MQ=60)
CGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAG > SRR4302537.2880239/1‑94 (MQ=60)
CGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAG > SRR4302537.3795760/1‑94 (MQ=60)
CGTACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAG > SRR4302537.5863401/1‑94 (MQ=60)
TACCGGCGCTGCTCGCGCTGACCTGCGCTCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGAC < SRR4302537.2945679/94‑1 (MQ=60)
TACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGAC < SRR4302537.2058769/94‑1 (MQ=60)
TACCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑GTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGtcgat > SRR4302537.4968721/1‑89 (MQ=60)
CCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGG < SRR4302537.3598248/94‑1 (MQ=60)
CCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGG > SRR4302537.2173138/1‑94 (MQ=60)
CCGGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGG > SRR4302537.3888340/1‑94 (MQ=60)
GGCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGC > SRR4302537.2591739/1‑94 (MQ=60)
GCGCTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCA < SRR4302537.1956870/94‑1 (MQ=60)
CTGCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGCAGACGGGCATGA > SRR4302537.2328031/1‑94 (MQ=60)
GCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAAT < SRR4302537.5057984/94‑1 (MQ=60)
GCTCGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAAT < SRR4302537.671765/94‑1 (MQ=60)
CGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTT < SRR4302537.4984363/94‑1 (MQ=60)
CGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTT > SRR4302537.5965072/1‑94 (MQ=60)
CGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTT < SRR4302537.466539/94‑1 (MQ=60)
CGCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTT > SRR4302537.2486781/1‑94 (MQ=60)
GCGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTT < SRR4302537.2377847/94‑1 (MQ=60)
CGCTGACCTGTGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTG < SRR4302537.332802/94‑1 (MQ=60)
CGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTG > SRR4302537.771638/1‑94 (MQ=60)
CGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTG < SRR4302537.3829692/94‑1 (MQ=60)
CGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTG > SRR4302537.4546350/1‑94 (MQ=60)
CGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTG < SRR4302537.2526820/94‑1 (MQ=60)
CGCTGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTG < SRR4302537.5265115/94‑1 (MQ=60)
TGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCTT > SRR4302537.2037674/1‑94 (MQ=60)
TGACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCTT > SRR4302537.3137722/1‑94 (MQ=60)
GACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCTTC < SRR4302537.1799973/94‑1 (MQ=60)
ACCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCTTCG > SRR4302537.4924654/1‑94 (MQ=60)
CCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCTTCGT > SRR4302537.6227202/1‑94 (MQ=60)
CCTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCTTCGT < SRR4302537.4521078/94‑1 (MQ=60)
CTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCTTCGTC > SRR4302537.1914215/1‑94 (MQ=60)
CTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCTTCGTC < SRR4302537.1627299/94‑1 (MQ=60)
CTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCTTCGTC < SRR4302537.5891193/94‑1 (MQ=60)
CTGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCTTCGTC < SRR4302537.4482159/94‑1 (MQ=60)
TGCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCTTCGTCG < SRR4302537.6402671/94‑1 (MQ=60)
GCGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCTTCGTCGC > SRR4302537.588394/1‑94 (MQ=60)
CGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCTTCGTCGCG > SRR4302537.1028534/1‑94 (MQ=60)
|
GGTAAATCTATTGCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGTGCGCCCG‑TTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCTTCGTCGCG > NC_000913/2749915‑2750101
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
