Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,772,634 |
T→C |
D432D (GAT→GAC) |
yfjW → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,772,634 | 0 | T | C | 95.9%
| 552.4
/ 10.2
| 170 | D432D (GAT→GAC) | yfjW | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (5/2); new base C (113/50); total (118/52) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.46e-01 |
Only 100 of 185 total aligned reads displayed.
TGCAAATTACTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGATTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAACAGG > NC_000913/2772544‑2772723
|
tGCAAATTACTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGActt > 2:1954919/1‑93 (MQ=255)
tGCAAATTACTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGActt > 1:5837459/1‑93 (MQ=255)
gCAAATTACTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACCATAGCCCTTCCGTACTACTCAAGACTGActtt > 1:3242125/1‑93 (MQ=255)
gCAAATTACTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGActtt > 1:1413409/1‑93 (MQ=255)
gCAAATTACTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGActtt > 1:398894/1‑93 (MQ=255)
aaaTTACTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGc > 2:3443898/1‑93 (MQ=255)
aaaTTACTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGc > 1:5668145/1‑93 (MQ=255)
ttACTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGtt > 1:950859/1‑93 (MQ=255)
aCTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCt > 2:3302595/1‑93 (MQ=255)
cTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCta < 2:1014495/93‑1 (MQ=255)
ttAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCtat > 2:4466406/1‑93 (MQ=255)
ttAACGGGGTTTTTACTTGTCCTAAAACCAGATGATATTATTTATTACAACAATAGCCCTTCCGTACTACTCCAGACTGACTTTGCGTTCtat > 2:513210/1‑93 (MQ=255)
tAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCtata > 2:4009402/1‑93 (MQ=255)
aaCGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATaa > 1:2680261/1‑93 (MQ=255)
aaCGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATaa > 2:5021342/1‑93 (MQ=255)
aCGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATaaa > 1:467168/1‑93 (MQ=255)
aCGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATaaa > 1:2155048/1‑93 (MQ=255)
ggTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATaaaaaa > 1:759730/1‑93 (MQ=255)
gTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATaaaaaaa < 1:226321/93‑1 (MQ=255)
ttttttACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAAc < 1:6122167/93‑1 (MQ=255)
tttttACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAcaca > 2:2437112/1‑93 (MQ=255)
tttttACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACa < 1:6255082/93‑1 (MQ=255)
tttACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATa > 1:2361987/1‑93 (MQ=255)
tttACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATa > 1:4374141/1‑93 (MQ=255)
ttACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATAc < 1:2986185/93‑1 (MQ=255)
ttACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATAc > 1:5131615/1‑93 (MQ=255)
aCTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCa < 1:4073812/93‑1 (MQ=255)
aCTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCa < 2:5343236/93‑1 (MQ=255)
cTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCaa > 1:5592316/1‑92 (MQ=255)
cTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAg > 2:1722971/1‑93 (MQ=255)
cTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAg < 2:4762624/93‑1 (MQ=255)
cTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAg < 2:570162/93‑1 (MQ=255)
tCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGc > 2:4128722/1‑93 (MQ=255)
cTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCtt < 1:1805178/93‑1 (MQ=255)
cTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCtt > 1:1710165/1‑93 (MQ=255)
aaaCCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGAt < 1:2476/93‑1 (MQ=255)
aaaCCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGAt < 2:5565019/93‑1 (MQ=255)
aaaCCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGAt < 1:1266722/93‑1 (MQ=255)
aGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAat > 2:5243794/1‑93 (MQ=255)
aGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAat > 2:1833938/1‑93 (MQ=255)
gatgatATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAata > 2:606431/1‑93 (MQ=255)
atgatATTATTAA‑TACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAatata < 2:4279155/93‑1 (MQ=255)
tgatATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAatata < 1:1057096/93‑1 (MQ=255)
tgatATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAatata < 2:6384688/93‑1 (MQ=255)
tgatATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAatata < 1:6163834/93‑1 (MQ=255)
gatATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAatatat > 2:5874124/1‑93 (MQ=255)
gatATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAatatat > 2:5279238/1‑93 (MQ=255)
gatATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAatatat > 2:6339432/1‑93 (MQ=255)
atatTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGATTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATatg < 2:241063/93‑1 (MQ=255)
tattatTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATatga > 1:319479/1‑93 (MQ=255)
tattatTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATatga > 2:1876644/1‑93 (MQ=255)
attattAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATatgat < 2:2825103/93‑1 (MQ=255)
tattaATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATAtgatga < 1:3915822/93‑1 (MQ=255)
ttaattaCAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACa > 1:416171/1‑93 (MQ=255)
attaCAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATaa > 2:4145229/1‑93 (MQ=255)
taCAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGc < 1:2912504/93‑1 (MQ=255)
taCAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGc > 2:4858139/1‑93 (MQ=255)
taCAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGc < 1:5911666/93‑1 (MQ=255)
acaacaATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCa > 1:4826323/1‑93 (MQ=255)
aacaaTAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAAt < 1:5868726/93‑1 (MQ=255)
acaaTAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATg > 1:6364181/1‑93 (MQ=255)
acaaTAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATg > 1:329994/1‑93 (MQ=255)
acaaTAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATg < 1:1633109/93‑1 (MQ=255)
caaTAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATgg > 2:4368538/1‑93 (MQ=255)
tAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGaaa < 1:4784281/93‑1 (MQ=255)
gCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAAt > 2:3889321/1‑93 (MQ=255)
gCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAAt > 2:3708882/1‑93 (MQ=255)
gCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAAt > 1:1071086/1‑93 (MQ=255)
gCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAAt < 2:4116570/93‑1 (MQ=255)
gCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAAt > 2:2347904/1‑93 (MQ=255)
cccTTCCGTACTACTCAAGACTGACTTTGCGTTCCATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAAtt < 1:2100671/93‑1 (MQ=255)
ccTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTa < 2:1323650/93‑1 (MQ=255)
cTTCCGTACTACTCAAGACTGATTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTAt > 1:3671312/1‑93 (MQ=255)
ttCCGTACTACTCAAGACTGATTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATc < 2:6410661/93‑1 (MQ=255)
ttCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTAtt > 1:1900738/1‑92 (MQ=255)
tCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCt < 2:774242/93‑1 (MQ=255)
cGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATAGCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTc > 1:3465797/1‑93 (MQ=255)
tactacTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCAc > 1:5596341/1‑93 (MQ=255)
tactCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTga > 1:4035647/1‑93 (MQ=255)
tactCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTga > 1:3076628/1‑93 (MQ=255)
tactCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTga > 2:4413607/1‑93 (MQ=255)
ctCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTgaga < 2:901033/93‑1 (MQ=255)
ctCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTgaga > 1:3141071/1‑93 (MQ=255)
tCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGagag < 2:5170695/93‑1 (MQ=255)
tCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGagag > 1:2753632/1‑93 (MQ=255)
tCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGagag < 1:4530747/93‑1 (MQ=255)
tCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGagag < 1:4262626/93‑1 (MQ=255)
aaGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCa > 2:4443985/1‑93 (MQ=255)
aaGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCa > 1:4636208/1‑93 (MQ=255)
aGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCaa > 2:4814345/1‑93 (MQ=255)
gactgactTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAAc < 2:878857/93‑1 (MQ=255)
gactgactTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAAc > 2:2854494/1‑93 (MQ=255)
gactgactTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAAc > 2:2637407/1‑93 (MQ=255)
cTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAACAg > 1:5512368/1‑93 (MQ=255)
tGATTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAACAgg > 1:6276123/1‑93 (MQ=255)
tGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGATAGCAACAgg > 1:4969655/1‑93 (MQ=255)
tGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAACAgg > 2:64855/1‑93 (MQ=255)
tGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAACAgg > 1:6308581/1‑93 (MQ=255)
tGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAACAgg < 2:3211012/93‑1 (MQ=255)
tGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAACAgg > 1:255402/1‑93 (MQ=255)
|
TGCAAATTACTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGATTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAACAGG > NC_000913/2772544‑2772723
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATGCAAATTACTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGATTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAACAGGTATC > NC_000913/2772543‑2772727
|
ATGCAAATTACTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTT > SRR4302537.5877469/1‑94 (MQ=60)
TGCAAATTACTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACCATAGCCCTTCCGTACTACTCAAGACTGACTTT > SRR4302537.3264974/1‑94 (MQ=60)
TGCAAATTACTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTT > SRR4302537.401662/1‑94 (MQ=60)
TGCAAATTACTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTT > SRR4302537.66445/1‑94 (MQ=60)
TGCAAATTACTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTT > SRR4302537.1423247/1‑94 (MQ=60)
CAAATTACTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGC > SRR4302537.5706929/1‑94 (MQ=60)
AATTACTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGT > SRR4302537.1699666/1‑94 (MQ=60)
ATTACTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTT > SRR4302537.957434/1‑94 (MQ=60)
ATTACTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTT > SRR4302537.3366735/1‑94 (MQ=60)
TACTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCT > SRR4302537.5900091/1‑94 (MQ=60)
TACTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCT > SRR4302537.6377279/1‑94 (MQ=60)
CTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTAT > SRR4302537.2205659/1‑94 (MQ=60)
TAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAA > SRR4302537.2698975/1‑94 (MQ=60)
AACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAA > SRR4302537.151100/1‑94 (MQ=60)
AACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAA > SRR4302537.2170237/1‑94 (MQ=60)
AACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAA > SRR4302537.470379/1‑94 (MQ=60)
GGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAA > SRR4302537.764923/1‑94 (MQ=60)
GTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAAC > SRR4302537.1110439/1‑94 (MQ=60)
GTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAAC < SRR4302537.227926/94‑1 (MQ=60)
TTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACA < SRR4302537.6164250/94‑1 (MQ=60)
TTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACAT < SRR4302537.6298049/94‑1 (MQ=60)
TTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACAT < SRR4302537.6298050/94‑1 (MQ=60)
TTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATA > SRR4302537.4404355/1‑94 (MQ=60)
TTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATA > SRR4302537.2378644/1‑94 (MQ=60)
TTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATAC > SRR4302537.5166977/1‑94 (MQ=60)
TTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACC < SRR4302537.3007050/94‑1 (MQ=60)
ACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAG < SRR4302537.4102259/94‑1 (MQ=60)
ACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAA > SRR4302537.5630550/1‑94 (MQ=60)
CTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGA > SRR4302537.822082/1‑94 (MQ=60)
GTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGC > SRR4302537.3796003/1‑94 (MQ=60)
CCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTT > SRR4302537.4808696/1‑94 (MQ=60)
CCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTT > SRR4302537.3065896/1‑94 (MQ=60)
CCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTT > SRR4302537.1722112/1‑94 (MQ=60)
CTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTG > SRR4302537.2341126/1‑94 (MQ=60)
CTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTG < SRR4302537.1817774/94‑1 (MQ=60)
CTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTG > SRR4302537.3283374/1‑94 (MQ=60)
AAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGAT > SRR4302537.4286552/1‑94 (MQ=60)
AAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATA < SRR4302537.2494/94‑1 (MQ=60)
AAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATA < SRR4302537.1275530/94‑1 (MQ=60)
CCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAA > SRR4302537.4542160/1‑94 (MQ=60)
CAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAAT > SRR4302537.1762949/1‑94 (MQ=60)
CAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAAT > SRR4302537.2156514/1‑94 (MQ=60)
AGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATA > SRR4302537.296647/1‑94 (MQ=60)
TGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATAT < SRR4302537.6206258/94‑1 (MQ=60)
TGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATAT > SRR4302537.4992332/1‑94 (MQ=60)
TGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATAT < SRR4302537.1064388/94‑1 (MQ=60)
ATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGA > SRR4302537.321693/1‑94 (MQ=60)
TATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGAC > SRR4302537.2434182/1‑94 (MQ=60)
TATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGAC > SRR4302537.3970751/1‑94 (MQ=60)
TATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGAC < SRR4302537.3943193/94‑1 (MQ=60)
TATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGAC > SRR4302537.2562182/1‑94 (MQ=60)
ATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACA > SRR4302537.419059/1‑94 (MQ=60)
ATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAG < SRR4302537.4819492/94‑1 (MQ=60)
ATTACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAG < SRR4302537.4564761/94‑1 (MQ=60)
TACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCA < SRR4302537.2932962/94‑1 (MQ=60)
TACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCA > SRR4302537.4859659/1‑94 (MQ=60)
TACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCA < SRR4302537.5952231/94‑1 (MQ=60)
ACAACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAA > SRR4302537.4351791/1‑94 (MQ=60)
AACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATG > SRR4302537.332283/1‑94 (MQ=60)
AACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATG > SRR4302537.6407594/1‑94 (MQ=60)
AACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATG < SRR4302537.5908987/94‑1 (MQ=60)
ACAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGG < SRR4302537.1644552/94‑1 (MQ=60)
CAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGA > SRR4302537.594678/1‑94 (MQ=60)
CAATAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGA > SRR4302537.4087779/1‑94 (MQ=60)
TAGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAA < SRR4302537.4817300/94‑1 (MQ=60)
AGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAAT > SRR4302537.1403078/1‑94 (MQ=60)
AGCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAAT > SRR4302537.1078473/1‑94 (MQ=60)
GCCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATT < SRR4302537.3203574/94‑1 (MQ=60)
CCCTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTA > SRR4302537.3501429/1‑94 (MQ=60)
CCCTTCCGTACTACTCAAGACTGACTTTGCGTTCCATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGAGATAAGCAATGTACAATTA > SRR4302537.6319358/1‑94 (MQ=60)
CCCTTCCGTACTACTCAAGACTGACTTTGCGTTCCATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTA < SRR4302537.2115486/94‑1 (MQ=60)
CCTTCCGTACTACTCAAGACTGATTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTAT > SRR4302537.3697143/1‑94 (MQ=60)
CTTCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATT > SRR4302537.1913938/1‑94 (MQ=60)
TCCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTT < SRR4302537.6151537/94‑1 (MQ=60)
CCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATAGCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTC > SRR4302537.3490306/1‑94 (MQ=60)
CCGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTC > SRR4302537.6224555/1‑94 (MQ=60)
CGTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCA < SRR4302537.280272/94‑1 (MQ=60)
GTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCAC > SRR4302537.5634606/1‑94 (MQ=60)
GTACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCAC > SRR4302537.2708773/1‑94 (MQ=60)
TACTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACT < SRR4302537.312031/94‑1 (MQ=60)
CTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGA > SRR4302537.3098059/1‑94 (MQ=60)
CTACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGA > SRR4302537.4063890/1‑94 (MQ=60)
ACTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGA > SRR4302537.3163115/1‑94 (MQ=60)
CTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAG > SRR4302537.2772851/1‑94 (MQ=60)
CTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAG < SRR4302537.585234/94‑1 (MQ=60)
CTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAG > SRR4302537.5078129/1‑94 (MQ=60)
CTCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAG > SRR4302537.558207/1‑94 (MQ=60)
TCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGC < SRR4302537.4562120/94‑1 (MQ=60)
TCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGC < SRR4302537.4292246/94‑1 (MQ=60)
TCAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGC < SRR4302537.516729/94‑1 (MQ=60)
CAAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCA > SRR4302537.4668277/1‑94 (MQ=60)
AAGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAA > SRR4302537.2003161/1‑94 (MQ=60)
AGACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAAC > SRR4302537.4158636/1‑94 (MQ=60)
GACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAACA < SRR4302537.5646341/94‑1 (MQ=60)
ACTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAACAG > SRR4302537.5550006/1‑94 (MQ=60)
CTGATTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAACAGG > SRR4302537.6319184/1‑94 (MQ=60)
CTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGATAGCAACAGG > SRR4302537.5003905/1‑94 (MQ=60)
CTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAACAGG > SRR4302537.257213/1‑94 (MQ=60)
CTGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAACAGG > SRR4302537.6351776/1‑94 (MQ=60)
TGACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAACAGGT > SRR4302537.4501641/1‑94 (MQ=60)
ACTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAACAGGTAT > SRR4302537.6360478/1‑94 (MQ=60)
CTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAACAGGTATC > SRR4302537.6513421/1‑94 (MQ=60)
CTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAACAGGTATC > SRR4302537.5072653/1‑94 (MQ=60)
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ATGCAAATTACTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGATTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAACAGGTATC > NC_000913/2772543‑2772727
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
