Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,801,553 |
T→C |
W11R (TGG→CGG) |
nrdF → |
ribonucleoside‑diphosphate reductase 2 beta chain |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,801,553 | 0 | T | C | 95.7%
| 828.8
/ 18.1
| 258 | W11R (TGG→CGG) | nrdF | ribonucleoside‑diphosphate reductase 2 beta chain |
| Reads supporting (aligned to +/- strand): ref base T (6/5); new base C (142/105); total (148/110) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.36e-01 |
Only 100 of 262 total aligned reads displayed.
ATGGCGCTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACTGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCGAACGAT > NC_000913/2801463‑2801645
|
aTGGCGCTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCgg > 1:4630101/1‑93 (MQ=255)
ggCGCTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGaa < 1:3376475/93‑1 (MQ=255)
gcgcTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAAc < 2:5916473/93‑1 (MQ=255)
gcgcTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAAc < 2:5353471/93‑1 (MQ=255)
gcTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACaa < 2:2167928/93‑1 (MQ=255)
gcTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACaa > 1:4170097/1‑93 (MQ=255)
tGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGa > 2:2940435/1‑93 (MQ=255)
tGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGa > 1:6442195/1‑93 (MQ=255)
ggAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGat > 1:3806149/1‑93 (MQ=255)
gAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGata < 2:5813016/93‑1 (MQ=255)
aaGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGatat > 1:1826128/1‑93 (MQ=255)
aaGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGatat > 1:4438929/1‑93 (MQ=255)
ggCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCt < 2:3921964/93‑1 (MQ=255)
cACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGa > 2:4894128/1‑93 (MQ=255)
aCTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGAc > 1:524776/1‑93 (MQ=255)
cTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACg > 1:6272796/1‑93 (MQ=255)
tGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGa > 2:6375248/1‑93 (MQ=255)
aaTTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATaa < 2:94549/93‑1 (MQ=255)
tGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGa < 2:2114176/93‑1 (MQ=255)
aaGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATc < 2:3094113/93‑1 (MQ=255)
aGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCt < 2:1311842/93‑1 (MQ=255)
aGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCt > 2:6427634/1‑93 (MQ=255)
ggCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTg < 1:2655694/93‑1 (MQ=255)
ggCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTg > 2:3341135/1‑93 (MQ=255)
gCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTgg > 1:4751789/1‑93 (MQ=255)
gCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTgg > 1:5375032/1‑93 (MQ=255)
tGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAg < 1:2974110/93‑1 (MQ=255)
tGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAg > 1:1450298/1‑93 (MQ=255)
gCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAgg > 2:2555143/1‑93 (MQ=255)
gCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAgg < 2:5081731/93‑1 (MQ=255)
gTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGgtg > 2:6331031/1‑93 (MQ=255)
tctcCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGgtgt < 2:695181/93‑1 (MQ=255)
ctcCTGTGCACTTTAAGGACTATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGtgtg > 2:1941341/1‑93 (MQ=255)
tcCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTgg < 1:4974407/93‑1 (MQ=255)
cTGTGCACTTTAAGGAATATCTATGAATCTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGaa < 1:3638182/93‑1 (MQ=255)
tgtgCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACTGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAAt < 1:5440561/93‑1 (MQ=255)
tgtgCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAAt > 1:1924775/1‑93 (MQ=255)
tgtgCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAAt < 2:519357/93‑1 (MQ=255)
gtgCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATc > 1:6237116/1‑93 (MQ=255)
aCTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCt < 1:5857234/93‑1 (MQ=255)
aCTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCt < 1:1728965/93‑1 (MQ=255)
cTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGCGGAATCGCCTg > 2:3175929/1‑93 (MQ=255)
ttAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGAc > 2:524868/1‑93 (MQ=255)
ttAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGAc > 2:5698471/1‑93 (MQ=255)
ttAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGAc > 1:812201/1‑93 (MQ=255)
aGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAg > 1:573633/1‑93 (MQ=255)
gAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCa > 2:81772/1‑93 (MQ=255)
gAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCa > 1:1530993/1‑93 (MQ=255)
aaTATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCaa < 2:1652098/93‑1 (MQ=255)
aaTATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCaa > 1:1242888/1‑93 (MQ=255)
tatCTATGAAACTCTCACGTATCAGCGCCATCAACTGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAAtt > 1:2034455/1‑93 (MQ=255)
tatCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAAtt > 1:1951091/1‑93 (MQ=255)
tatCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAAtt > 1:620051/1‑93 (MQ=255)
tatCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAAtt > 1:578494/1‑93 (MQ=255)
tCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTc > 1:901735/1‑93 (MQ=255)
tCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTc < 1:448698/93‑1 (MQ=255)
tATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTg > 2:5427039/1‑93 (MQ=255)
tATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTg > 1:108387/1‑93 (MQ=255)
tATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTg > 1:249242/1‑93 (MQ=255)
tATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTg > 1:2462766/1‑93 (MQ=255)
tGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGc > 2:2427265/1‑93 (MQ=255)
aaaCTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCtc > 1:2317806/1‑92 (MQ=255)
aaaCTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTa < 2:1692410/93‑1 (MQ=255)
aCTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTAcc > 2:4094782/1‑93 (MQ=255)
ctctCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCa < 2:6177970/93‑1 (MQ=255)
tctcACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAg > 1:131901/1‑93 (MQ=255)
tctcACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAg > 1:1606798/1‑93 (MQ=255)
tctcACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAg < 1:5775046/93‑1 (MQ=255)
ctcACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGa < 1:2811117/93‑1 (MQ=255)
ctcACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGa < 1:157213/93‑1 (MQ=255)
atcACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGa > 1:6096362/2‑93 (MQ=255)
aCGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGaaaa < 2:1769870/93‑1 (MQ=255)
aCGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGaaaa < 1:1022294/93‑1 (MQ=255)
cGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAg > 2:2887650/1‑93 (MQ=255)
gTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAgg < 2:4630101/93‑1 (MQ=255)
tATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGt > 2:3749488/1‑93 (MQ=255)
tATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGt > 1:1126926/1‑93 (MQ=255)
tATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGt < 2:4605725/93‑1 (MQ=255)
aTCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTg > 2:3620374/1‑93 (MQ=255)
aTCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTg > 1:506530/1‑93 (MQ=255)
tCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGc < 2:2522771/93‑1 (MQ=255)
tCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGc > 1:1624463/1‑93 (MQ=255)
cAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGcc < 2:6255188/93‑1 (MQ=255)
gcgcCATCAACCGGAATAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGc < 2:1490309/93‑1 (MQ=255)
gcgcCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGGAAAGGTGCCGc < 1:4885787/93‑1 (MQ=255)
gcgcCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGc < 2:1927730/93‑1 (MQ=255)
gcgcCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGc < 2:4508399/93‑1 (MQ=255)
cgcCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCt > 2:554064/1‑93 (MQ=255)
ccATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGt < 1:1985490/93‑1 (MQ=255)
ccATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGt > 2:4425564/1‑93 (MQ=255)
ccATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGt > 1:3980112/1‑93 (MQ=255)
aTCAACTGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCg > 2:454380/1‑93 (MQ=255)
aTCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCg > 2:3000894/1‑93 (MQ=255)
aTCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCg > 2:6097359/1‑93 (MQ=255)
aTCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCg < 2:4746337/93‑1 (MQ=255)
cAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCGaa < 1:6335223/93‑1 (MQ=255)
cAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCGaa > 2:939012/1‑93 (MQ=255)
cAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCGaa > 2:4149274/1‑93 (MQ=255)
aaCCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCGAAc < 2:5685378/93‑1 (MQ=255)
tGGAACAAGATATCTGACGATAAAGATCTGGAGGCGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCGAACGat > 1:1145794/1‑93 (MQ=255)
|
ATGGCGCTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACTGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCGAACGAT > NC_000913/2801463‑2801645
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGATGGCGCTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACTGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCGAACGATA > NC_000913/2801460‑2801646
|
CAGATGGCGCTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACC < SRR4302537.4843533/94‑1 (MQ=60)
AGATGGCGCTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCG < SRR4302537.20221/94‑1 (MQ=60)
AGATGGCGCTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCG > SRR4302537.6115100/1‑94 (MQ=60)
AGATGGCGCTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCG > SRR4302537.2513990/1‑94 (MQ=60)
AGATGGCGCTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCG < SRR4302537.3964621/94‑1 (MQ=60)
AGATGGCGCTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCG > SRR4302537.5018190/1‑94 (MQ=60)
AGATGGCGCTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCG < SRR4302537.1359941/94‑1 (MQ=60)
GATGGCGCTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGG < SRR4302537.2282023/94‑1 (MQ=60)
GATGGCGCTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGG > SRR4302537.4662134/1‑94 (MQ=60)
ATGGCGCTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGA > SRR4302537.1120055/1‑94 (MQ=60)
ATGGCGCTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGA > SRR4302537.4250501/1‑94 (MQ=60)
TGCGCTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACTGGAAC < SRR4302537.1812913/94‑1 (MQ=60)
GGCGCTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAAC < SRR4302537.3400406/94‑1 (MQ=60)
GGCGCTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCAATCAACCGGAAC > SRR4302537.4611421/1‑94 (MQ=60)
GCGCTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACA < SRR4302537.5197945/94‑1 (MQ=60)
CGCTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAA > SRR4302537.4199222/1‑94 (MQ=60)
CGCTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAA > SRR4302537.6268523/1‑94 (MQ=60)
CTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGA < SRR4302537.4951134/94‑1 (MQ=60)
CTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGA > SRR4302537.6485911/1‑94 (MQ=60)
TGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGAT > SRR4302537.3832838/1‑94 (MQ=60)
TGGAAGGCACTGAAATTGAAGGCAGCGTCTCCTGTGCACTTTAAGGAATATCTATGATAATCTCAAGTATAAGCGCCATCAACAGGAACAAGAT > SRR4302537.5820850/1‑94 (MQ=60)
GAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATAT > SRR4302537.4469580/1‑94 (MQ=60)
GAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATAT > SRR4302537.1838855/1‑94 (MQ=60)
AAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATC > SRR4302537.6419348/1‑94 (MQ=60)
GGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTG < SRR4302537.5892842/94‑1 (MQ=60)
CACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGAC > SRR4302537.528378/1‑94 (MQ=60)
ACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACG > SRR4302537.6315841/1‑94 (MQ=60)
ACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACG > SRR4302537.5441974/1‑94 (MQ=60)
ACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACG < SRR4302537.2598743/94‑1 (MQ=60)
TGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGAT < SRR4302537.1517081/94‑1 (MQ=60)
AAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAGTATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAA < SRR4302537.1268003/94‑1 (MQ=60)
AAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAA > SRR4302537.6174873/1‑94 (MQ=60)
AATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAA > SRR4302537.4625629/1‑94 (MQ=60)
TTGAAGGCTGCGTCTCCTGTGCGCTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGA < SRR4302537.5375071/94‑1 (MQ=60)
TTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGA < SRR4302537.5303343/94‑1 (MQ=60)
TGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGAT < SRR4302537.1088169/94‑1 (MQ=60)
TGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGAT > SRR4302537.3311972/1‑94 (MQ=60)
TGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGAT > SRR4302537.6268686/1‑94 (MQ=60)
AAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCT > SRR4302537.3909644/1‑94 (MQ=60)
AGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAGCTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTG < SRR4302537.856052/94‑1 (MQ=60)
AGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTG < SRR4302537.1301475/94‑1 (MQ=60)
GGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGG > SRR4302537.5411785/1‑94 (MQ=60)
GGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGG < SRR4302537.2674258/94‑1 (MQ=60)
GGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGG < SRR4302537.1621842/94‑1 (MQ=60)
GGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGG > SRR4302537.4784612/1‑94 (MQ=60)
GCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGA > SRR4302537.2993121/1‑94 (MQ=60)
CTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACTGGAACAAGATATCTGACGATAAAGATCTGGAG < SRR4302537.3703801/94‑1 (MQ=60)
CTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAG > SRR4302537.1460402/1‑94 (MQ=60)
CTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAG < SRR4302537.2348210/94‑1 (MQ=60)
TGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGG > SRR4302537.2500793/1‑94 (MQ=60)
TGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGG < SRR4302537.2994940/94‑1 (MQ=60)
GTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGT < SRR4302537.4299028/94‑1 (MQ=60)
GTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGG > SRR4302537.2113992/1‑94 (MQ=60)
CTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGG > SRR4302537.5083489/1‑94 (MQ=60)
CTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGG < SRR4302537.5918107/94‑1 (MQ=60)
CTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGG < SRR4302537.4044172/94‑1 (MQ=60)
TCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGA < SRR4302537.5008692/94‑1 (MQ=60)
CTGTGCACTTTAAGGAATATCTATGAATCTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAAT < SRR4302537.3663799/94‑1 (MQ=60)
CTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAAT > SRR4302537.1938135/1‑94 (MQ=60)
CTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAAT < SRR4302537.1338199/94‑1 (MQ=60)
CTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAAT > SRR4302537.4962753/1‑94 (MQ=60)
TGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACTGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATC < SRR4302537.5477671/94‑1 (MQ=60)
TGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATC < SRR4302537.1584991/94‑1 (MQ=60)
TGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATC < SRR4302537.4470177/94‑1 (MQ=60)
TGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATC > SRR4302537.6280005/1‑94 (MQ=60)
GTTCATTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCG < SRR4302537.4307855/94‑1 (MQ=60)
GTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCG > SRR4302537.484752/1‑94 (MQ=60)
ACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTG < SRR4302537.5897412/94‑1 (MQ=60)
ACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTG < SRR4302537.1741037/94‑1 (MQ=60)
CTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGA < SRR4302537.1213668/94‑1 (MQ=60)
TTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGAC > SRR4302537.2705280/1‑94 (MQ=60)
TTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGAC > SRR4302537.817767/1‑94 (MQ=60)
AAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAG > SRR4302537.577573/1‑94 (MQ=60)
AGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGC > SRR4302537.2820484/1‑94 (MQ=60)
GGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCA > SRR4302537.3976777/1‑94 (MQ=60)
GGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCA > SRR4302537.1541692/1‑94 (MQ=60)
GGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCA > SRR4302537.4672132/1‑94 (MQ=60)
GGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCA < SRR4302537.233621/94‑1 (MQ=60)
GAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAT > SRR4302537.2145653/1‑94 (MQ=60)
GAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAA > SRR4302537.1141685/1‑94 (MQ=60)
GAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAA > SRR4302537.1526243/1‑94 (MQ=60)
GAATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAA > SRR4302537.1251547/1‑94 (MQ=60)
ATATCTATGAAACTCTCACGTATCAGCGCCATCAACTGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATT > SRR4302537.2048635/1‑94 (MQ=60)
ATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATT > SRR4302537.582454/1‑94 (MQ=60)
ATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATT > SRR4302537.624272/1‑94 (MQ=60)
ATATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATT > SRR4302537.1964659/1‑94 (MQ=60)
TATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTT < SRR4302537.1592759/94‑1 (MQ=60)
ATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTC > SRR4302537.6129261/1‑94 (MQ=60)
ATCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTC > SRR4302537.907957/1‑94 (MQ=60)
TCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCT < SRR4302537.451807/94‑1 (MQ=60)
TCTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCT < SRR4302537.5038477/94‑1 (MQ=60)
CTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTG > SRR4302537.2480084/1‑94 (MQ=60)
CTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTG > SRR4302537.251014/1‑94 (MQ=60)
CTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTG > SRR4302537.1950272/1‑94 (MQ=60)
CTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTG > SRR4302537.109180/1‑94 (MQ=60)
CTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTG < SRR4302537.5589110/94‑1 (MQ=60)
CTATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTG < SRR4302537.1119905/94‑1 (MQ=60)
TATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGG > SRR4302537.807346/1‑94 (MQ=60)
TATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGG > SRR4302537.628946/1‑94 (MQ=60)
TATCAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGG < SRR4302537.5800067/94‑1 (MQ=60)
ATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACTAGCAATTTCTGGC < SRR4302537.3512874/94‑1 (MQ=60)
ATGAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGC > SRR4302537.1985564/1‑94 (MQ=60)
GAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTC > SRR4302537.2334174/1‑94 (MQ=60)
GAAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTA > SRR4302537.4688282/1‑94 (MQ=60)
AAACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTAC > SRR4302537.1548012/1‑94 (MQ=60)
AAACTCTCACGTATCAGCGCCACCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTAC > SRR4302537.860686/1‑94 (MQ=60)
AACTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACC < SRR4302537.1827688/94‑1 (MQ=60)
CTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAG > SRR4302537.1618035/1‑94 (MQ=60)
CTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAG < SRR4302537.6432251/94‑1 (MQ=60)
CTCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAG > SRR4302537.132837/1‑94 (MQ=60)
TCTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGA < SRR4302537.5814628/94‑1 (MQ=60)
TATCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGA > SRR4302537.6138250/1‑94 (MQ=60)
CTCACGTATCAGCGCCATCAACTGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAA > SRR4302537.1917304/1‑94 (MQ=60)
CTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGCA > SRR4302537.2552643/1‑94 (MQ=60)
CTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAA < SRR4302537.2830773/94‑1 (MQ=60)
CTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAA > SRR4302537.3722301/1‑94 (MQ=60)
CTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAA > SRR4302537.320015/1‑94 (MQ=60)
CTCACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAA < SRR4302537.158332/94‑1 (MQ=60)
ACGTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAG < SRR4302537.1029333/94‑1 (MQ=60)
GTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGT > SRR4302537.1625263/1‑94 (MQ=60)
GTATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGT > SRR4302537.1134742/1‑94 (MQ=60)
TATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTG > SRR4302537.962516/1‑94 (MQ=60)
TATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTG > SRR4302537.510004/1‑94 (MQ=60)
ATCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGC > SRR4302537.1635828/1‑94 (MQ=60)
TCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCC < SRR4302537.2011374/94‑1 (MQ=60)
TCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCC < SRR4302537.1726035/94‑1 (MQ=60)
TCAGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCC < SRR4302537.5868510/94‑1 (MQ=60)
AGCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGC > SRR4302537.1896871/1‑94 (MQ=60)
GCGCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGGAAAGGTGCCGCT < SRR4302537.4919527/94‑1 (MQ=60)
GCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGT > SRR4302537.6323017/1‑94 (MQ=60)
GCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGT < SRR4302537.5519572/94‑1 (MQ=60)
GCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGT > SRR4302537.4007970/1‑94 (MQ=60)
GCCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGT > SRR4302537.1996864/1‑94 (MQ=60)
CCATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTC < SRR4302537.1999286/94‑1 (MQ=60)
CATCAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCG > SRR4302537.6329169/1‑94 (MQ=60)
CAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCGAAC < SRR4302537.6378532/94‑1 (MQ=60)
CAACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGACGCTGTCGAAC > SRR4302537.5808380/1‑94 (MQ=60)
AACTGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCGAACG < SRR4302537.1234840/94‑1 (MQ=60)
AACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCGAACG > SRR4302537.3210979/1‑94 (MQ=60)
ACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCGAACGA > SRR4302537.2164620/1‑94 (MQ=60)
ACCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCGAACGA > SRR4302537.4724254/1‑94 (MQ=60)
CTGGAACAAGATATCTGACGATAAAGATCTGGAGGCGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCGAACGAT > SRR4302537.1153763/1‑94 (MQ=60)
CCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCGAACGAT > SRR4302537.4877729/1‑94 (MQ=60)
CCGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCATGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCGAACGAT < SRR4302537.3561445/94‑1 (MQ=60)
CGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCGAACGATA < SRR4302537.453483/94‑1 (MQ=60)
CGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCGAACGATA > SRR4302537.5984000/1‑94 (MQ=60)
CGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCGAACGATA > SRR4302537.1076431/1‑94 (MQ=60)
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CAGATGGCGCTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAAGGAATATCTATGAAACTCTCACGTATCAGCGCCATCAACTGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCGAACGATA > NC_000913/2801460‑2801646
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
