Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,936,533 |
T→C |
C358C (TGT→TGC) |
fucK → |
L‑fuculokinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,936,533 | 0 | T | C | 95.9%
| 696.6
/ 13.3
| 220 | C358C (TGT→TGC) | fucK | L‑fuculokinase |
| Reads supporting (aligned to +/- strand): ref base T (4/5); new base C (124/87); total (128/92) |
| Fisher's exact test for biased strand distribution p-value = 4.96e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.45e-01 |
Only 100 of 231 total aligned reads displayed.
TGAAACACCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGTCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCAATTACA > NC_000913/2936443‑2936622
|
tGAAACACCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCa > 2:3657832/1‑93 (MQ=255)
tGAAACACCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCa > 1:4361529/1‑93 (MQ=255)
gAAACACCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAg > 1:5525534/1‑93 (MQ=255)
aaaCACCGTGGCAAATGATGATTGAAGAAGCTCGTCTGATCGCGCCTAGCGCGGATGGCGTAAACATGCAGGGTGGTTTATTGTCGCGCCAGa > 2:3723616/1‑93 (MQ=255)
aaaCACCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGa > 2:5719156/1‑93 (MQ=255)
aaCACCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGaa < 2:1413655/93‑1 (MQ=255)
acCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACgc > 2:6447372/1‑93 (MQ=255)
acCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACgc > 1:41806/1‑93 (MQ=255)
acCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCACTGTGATTTATTGTCGTGCCAGAACgc > 2:5217581/1‑93 (MQ=255)
ccTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACgctg > 2:5824526/1‑93 (MQ=255)
cTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACgctgg > 1:155468/1‑93 (MQ=255)
cTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACgctgg > 2:3357128/1‑93 (MQ=255)
cTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACgctgg > 2:3974772/1‑93 (MQ=255)
tGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACgctggc > 1:3548872/1‑93 (MQ=255)
tGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACgctggc < 1:1370387/93‑1 (MQ=255)
gCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACgctggctg < 2:4162532/93‑1 (MQ=255)
gCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACgctggctg > 1:867090/1‑93 (MQ=255)
aaaTGTTGTTTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGGAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCtggctggc > 2:4283827/1‑93 (MQ=255)
aaaTGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCtggctggc > 2:5559333/1‑93 (MQ=255)
aTGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCaa < 2:1152575/93‑1 (MQ=255)
tGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAg > 1:6286816/1‑93 (MQ=255)
ttgattgaAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGa > 1:1461060/1‑93 (MQ=255)
tgattgaAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAg > 1:3106288/1‑93 (MQ=255)
tgattgaAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAg < 2:4125210/93‑1 (MQ=255)
gattgaAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAgg > 2:2881838/1‑92 (MQ=255)
gattgaAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAgg > 1:1386662/1‑92 (MQ=255)
gattgaAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGt > 2:4484561/1‑93 (MQ=255)
gattgaAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGt < 1:5240258/93‑1 (MQ=255)
attgaAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTg > 1:3154311/1‑93 (MQ=255)
ttgaAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGa < 1:3267986/93‑1 (MQ=255)
ttgaAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGa > 2:2553811/1‑93 (MQ=255)
tgaAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGAc < 1:3018751/93‑1 (MQ=255)
aagaagCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGc < 2:2632960/93‑1 (MQ=255)
aagaagCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGc > 1:2130382/1‑93 (MQ=255)
gaagCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCtt > 1:4232559/1‑93 (MQ=255)
gaagCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCtt > 2:5612658/1‑93 (MQ=255)
aagCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTa < 2:962249/93‑1 (MQ=255)
agCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTaa > 1:738872/1‑93 (MQ=255)
gCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAAt < 2:2716625/93‑1 (MQ=255)
gCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAAt < 2:1261444/93‑1 (MQ=255)
cTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATa < 2:5454552/93‑1 (MQ=255)
cTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATa < 2:859416/93‑1 (MQ=255)
cTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATa < 1:4578393/93‑1 (MQ=255)
tCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATAc < 2:5561363/93‑1 (MQ=255)
tCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATAc > 1:598539/1‑93 (MQ=255)
tCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAAAGCTGGCTGGCAAGGAGTGACGCTTAAtgc > 1:2732809/1‑91 (MQ=255)
gTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCa > 2:3273227/1‑93 (MQ=255)
tCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCAc > 2:4586792/1‑93 (MQ=255)
tCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCAc > 2:5082784/1‑93 (MQ=255)
tCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCAc > 1:1252071/1‑93 (MQ=255)
tCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCAc > 1:3586246/1‑93 (MQ=255)
cTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGTCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCAcg < 1:4826589/93‑1 (MQ=255)
tGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCAcgc > 2:2791394/1‑93 (MQ=255)
tGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCAcgc > 2:4530585/1‑93 (MQ=255)
tCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGTCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCggg < 1:927102/93‑1 (MQ=255)
cgcgCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCgggg < 1:1098601/93‑1 (MQ=255)
gcgcCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCggggg < 1:2492257/93‑1 (MQ=255)
ccTGGCTCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCAt < 1:3235350/93‑1 (MQ=255)
ccTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCAt < 1:6067688/93‑1 (MQ=255)
cTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGAAGCTTAATACCACGCGGGGGCAtt > 2:691837/1‑93 (MQ=255)
ggCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCAtttt > 1:2036921/1‑92 (MQ=255)
gcgcGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCt < 2:5933594/93‑1 (MQ=255)
cgcgGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTa < 2:5644564/93‑1 (MQ=255)
cgGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATc < 1:2605000/93‑1 (MQ=255)
gATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATcgc < 1:810483/93‑1 (MQ=255)
aTGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATcgcg < 1:4615328/93‑1 (MQ=255)
tGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAAAGCTGGCTGGCAAGGAGGGAAGCTTTATAACACCCGGGGGGAGTTTTATtgcgc > 2:2331239/1‑93 (MQ=255)
ggCGTAAAAATGCAGTTTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATcgcgcg < 2:2314691/93‑1 (MQ=255)
ggCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATcgcgcg > 1:6264663/1‑93 (MQ=255)
gCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCgcgg > 1:3861667/1‑93 (MQ=255)
gCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCgcgg > 1:5407469/1‑93 (MQ=255)
gTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCgcggcg > 1:1693238/1‑93 (MQ=255)
gTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCgcggcg > 2:3566949/1‑93 (MQ=255)
gTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCgcggcg > 1:5743135/1‑93 (MQ=255)
tAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGgcgc < 1:5162867/93‑1 (MQ=255)
aaaaaTGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCt > 2:114282/1‑93 (MQ=255)
aaaaTGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTg < 2:4999683/93‑1 (MQ=255)
aTGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGaa > 1:5089567/1‑93 (MQ=255)
tGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAg > 1:2428727/1‑93 (MQ=255)
tGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAg > 1:1836757/1‑93 (MQ=255)
gCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAgg < 2:2108571/93‑1 (MQ=255)
aGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGt > 1:6465526/1‑93 (MQ=255)
aGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGt < 1:3973924/93‑1 (MQ=255)
gtgtGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGtt > 2:628991/1‑93 (MQ=255)
gtgtGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGtt < 1:4295514/93‑1 (MQ=255)
tgATTTATTGTCGTGCCAGAACGCTGGCTGGCATGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAAc < 2:1223744/93‑1 (MQ=255)
tgATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGGTAAc > 2:6065868/1‑93 (MQ=255)
aTTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCTCGGCGCTGGAAGGGTTAACTg < 1:2550419/93‑1 (MQ=255)
ttATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTgcg < 2:3071165/93‑1 (MQ=255)
ttATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTgcg < 2:2763722/93‑1 (MQ=255)
tATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTgcgc < 2:2297012/93‑1 (MQ=255)
aTTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCa > 1:496689/1‑93 (MQ=255)
aTTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCa > 1:6799/1‑93 (MQ=255)
aTTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCa > 1:3844647/1‑93 (MQ=255)
tCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCAATTa < 1:1521687/93‑1 (MQ=255)
cGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCAATTAc < 1:1200801/93‑1 (MQ=255)
cGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCAATTAc < 2:4664003/93‑1 (MQ=255)
gtgcCAGATCGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCAATTACa < 2:6412904/93‑1 (MQ=255)
gtgcCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCAATTACa < 2:1920017/93‑1 (MQ=255)
gtgcCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCAATTACa < 1:3613296/93‑1 (MQ=255)
|
TGAAACACCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGTCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCAATTACA > NC_000913/2936443‑2936622
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCTGAAACACCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGTCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCAATTACAGCGC > NC_000913/2936441‑2936626
|
GCTGAAACACCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCC > SRR4302537.960420/1‑94 (MQ=60)
CTGAAACACCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCA < SRR4302537.5289865/94‑1 (MQ=60)
CTGAAACACCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCA > SRR4302537.4391705/1‑94 (MQ=60)
TGAAACACCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAG > SRR4302537.5563247/1‑94 (MQ=60)
TGAAACACCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAG > SRR4302537.756282/1‑94 (MQ=60)
GAAACACCCTGGCAAATGTTGCTTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGA > SRR4302537.6124381/1‑94 (MQ=60)
AAACACCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAA > SRR4302537.3205440/1‑94 (MQ=60)
AACACCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAAC < SRR4302537.912111/94‑1 (MQ=60)
AACACCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAAC < SRR4302537.4290209/94‑1 (MQ=60)
CACCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGC > SRR4302537.42116/1‑94 (MQ=60)
ACCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCT > SRR4302537.3856595/1‑94 (MQ=60)
CCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGTCAGAACGCTG > SRR4302537.4346651/1‑94 (MQ=60)
CCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTG < SRR4302537.144870/94‑1 (MQ=60)
CCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGG > SRR4302537.156575/1‑94 (MQ=60)
CTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGC > SRR4302537.3573941/1‑94 (MQ=60)
CTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGC > SRR4302537.4508840/1‑94 (MQ=60)
TGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCT < SRR4302537.1379934/94‑1 (MQ=60)
GGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTG < SRR4302537.421211/94‑1 (MQ=60)
GGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTG > SRR4302537.873038/1‑94 (MQ=60)
CAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGC > SRR4302537.3995556/1‑94 (MQ=60)
CAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGC > SRR4302537.5712067/1‑94 (MQ=60)
ATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAG > SRR4302537.6329913/1‑94 (MQ=60)
ATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAG < SRR4302537.1267391/94‑1 (MQ=60)
ATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAG > SRR4302537.1560019/1‑94 (MQ=60)
GTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGA > SRR4302537.2536543/1‑94 (MQ=60)
GTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGA > SRR4302537.1471227/1‑94 (MQ=60)
TTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAG > SRR4302537.544568/1‑94 (MQ=60)
TTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAG > SRR4302537.3127984/1‑94 (MQ=60)
TGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGT < SRR4302537.3204584/94‑1 (MQ=60)
TGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGG > SRR4302537.1396330/1‑94 (MQ=60)
TGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGG > SRR4302537.4619322/1‑94 (MQ=60)
GATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGCTGGCGTAAAAATGCCGCGTGATTTATTGTCGTGTCAGAACGCTGGCTTGCAAGGAGTG > SRR4302537.1481445/1‑94 (MQ=60)
GATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTG < SRR4302537.5276320/94‑1 (MQ=60)
GATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTG > SRR4302537.3176458/1‑94 (MQ=60)
GATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACCCTGGCTGGCAAGGAGTG > SRR4302537.1382159/1‑94 (MQ=60)
TTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGAC < SRR4302537.3291045/94‑1 (MQ=60)
TGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACG < SRR4302537.3039795/94‑1 (MQ=60)
TGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACG > SRR4302537.5421310/1‑94 (MQ=60)
GAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGC > SRR4302537.2145370/1‑94 (MQ=60)
AGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTT > SRR4302537.4262017/1‑94 (MQ=60)
AAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAA > SRR4302537.743906/1‑94 (MQ=60)
AAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAA > SRR4302537.2465067/1‑94 (MQ=60)
GCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATA > SRR4302537.3002359/1‑94 (MQ=60)
CTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATAC > SRR4302537.602634/1‑94 (MQ=60)
CTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATAC < SRR4302537.4610072/94‑1 (MQ=60)
CTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAAAGCTGGCTGGCAAGGAGTGACGCTTAATGC > SRR4302537.2751885/1‑94 (MQ=60)
CGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCA > SRR4302537.4944470/1‑94 (MQ=60)
CGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCA > SRR4302537.4059300/1‑94 (MQ=60)
GTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCAC > SRR4302537.1260784/1‑94 (MQ=60)
GTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCAC > SRR4302537.3611528/1‑94 (MQ=60)
CTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGTCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGC < SRR4302537.4859925/94‑1 (MQ=60)
CTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGTCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGC > SRR4302537.6081105/1‑94 (MQ=60)
CTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGTCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGC > SRR4302537.1941715/1‑94 (MQ=60)
CTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGC > SRR4302537.5309697/1‑94 (MQ=60)
CTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGC > SRR4302537.985754/1‑94 (MQ=60)
GATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGG < SRR4302537.814013/94‑1 (MQ=60)
ATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGG > SRR4302537.4286489/1‑94 (MQ=60)
ATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGG > SRR4302537.3873965/1‑94 (MQ=60)
TCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGTCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGG < SRR4302537.933492/94‑1 (MQ=60)
TCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGG < SRR4302537.3368184/94‑1 (MQ=60)
CGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGG < SRR4302537.1106192/94‑1 (MQ=60)
CGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGG < SRR4302537.5267789/94‑1 (MQ=60)
CGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGG < SRR4302537.2898904/94‑1 (MQ=60)
CGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGG < SRR4302537.827166/94‑1 (MQ=60)
GCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGC > SRR4302537.155717/1‑94 (MQ=60)
GCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGC < SRR4302537.2509806/94‑1 (MQ=60)
CCTGGCTCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATT < SRR4302537.3258156/94‑1 (MQ=60)
CCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATT > SRR4302537.1869118/1‑94 (MQ=60)
CCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATT < SRR4302537.6109372/94‑1 (MQ=60)
TGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTT > SRR4302537.2051121/1‑94 (MQ=60)
GGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCT < SRR4302537.3150807/94‑1 (MQ=60)
GCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTA > SRR4302537.3101509/1‑94 (MQ=60)
CGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTAT < SRR4302537.3576457/94‑1 (MQ=60)
CGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCG < SRR4302537.2623214/94‑1 (MQ=60)
GGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGC > SRR4302537.3275483/1‑94 (MQ=60)
GATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCG > SRR4302537.737407/1‑94 (MQ=60)
GATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCG > SRR4302537.51009/1‑94 (MQ=60)
GATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCG < SRR4302537.816039/94‑1 (MQ=60)
GATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCG > SRR4302537.123474/1‑94 (MQ=60)
ATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGC < SRR4302537.4647292/94‑1 (MQ=60)
ATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGC > SRR4302537.2183960/1‑94 (MQ=60)
ATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGC > SRR4302537.2080487/1‑94 (MQ=60)
TGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCG < SRR4302537.2571714/94‑1 (MQ=60)
TGGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCG > SRR4302537.6307665/1‑94 (MQ=60)
GGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGG > SRR4302537.3888697/1‑94 (MQ=60)
AGCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGG > SRR4302537.5444353/1‑94 (MQ=60)
GCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGC > SRR4302537.4639218/1‑94 (MQ=60)
GCGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGC > SRR4302537.1384620/1‑94 (MQ=60)
CGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCG > SRR4302537.1574458/1‑94 (MQ=60)
CGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCG > SRR4302537.1705088/1‑94 (MQ=60)
CGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCG > SRR4302537.5782456/1‑94 (MQ=60)
CGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCG > SRR4302537.5902692/1‑94 (MQ=60)
CGTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCG < SRR4302537.3583434/94‑1 (MQ=60)
GTAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGC > SRR4302537.6354462/1‑94 (MQ=60)
TAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCT < SRR4302537.5198451/94‑1 (MQ=60)
TAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCT < SRR4302537.4680941/94‑1 (MQ=60)
TAAAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCT > SRR4302537.6402861/1‑94 (MQ=60)
AAAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGG < SRR4302537.5831123/94‑1 (MQ=60)
AAATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGA > SRR4302537.2495062/1‑94 (MQ=60)
AATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAA > SRR4302537.5124607/1‑94 (MQ=60)
ATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAG > SRR4302537.1849540/1‑94 (MQ=60)
ATGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAG > SRR4302537.2445838/1‑94 (MQ=60)
TGCAGTGTGATTTATTGTCGTGTCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGG > SRR4302537.3635972/1‑94 (MQ=60)
TGCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGG > SRR4302537.120098/1‑94 (MQ=60)
GCAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGG < SRR4302537.5087446/94‑1 (MQ=60)
CAGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGT > SRR4302537.6509319/1‑94 (MQ=60)
AGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTT < SRR4302537.2662933/94‑1 (MQ=60)
AGTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTT < SRR4302537.4001744/94‑1 (MQ=60)
GTGTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTA < SRR4302537.4325376/94‑1 (MQ=60)
TGTGATTTATTGTCGTTCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAA > SRR4302537.1847181/1‑94 (MQ=60)
GTGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAAC < SRR4302537.3880856/94‑1 (MQ=60)
TGATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACT > SRR4302537.684414/1‑94 (MQ=60)
GATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTG > SRR4302537.517847/1‑94 (MQ=60)
ATTTATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCTCGGCGCTGGAAGGGTTAACTGC < SRR4302537.2568283/94‑1 (MQ=60)
TATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCA > SRR4302537.3871568/1‑94 (MQ=60)
TATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCA > SRR4302537.6849/1‑94 (MQ=60)
TATTGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCA > SRR4302537.500106/1‑94 (MQ=60)
TTGTCGTGTCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCAAT < SRR4302537.1524562/94‑1 (MQ=60)
TGTCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCAATT < SRR4302537.6319757/94‑1 (MQ=60)
TCGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCAATTAC < SRR4302537.1532316/94‑1 (MQ=60)
CGTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCAATTACA < SRR4302537.1209152/94‑1 (MQ=60)
GTGCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCAATTACAG < SRR4302537.3638769/94‑1 (MQ=60)
GCCAGCACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCAATTACAGCG < SRR4302537.3446124/94‑1 (MQ=60)
GCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCAATTACAGCG < SRR4302537.6140586/94‑1 (MQ=60)
GCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCAATTACAGCG > SRR4302537.338584/1‑94 (MQ=60)
GCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCAATTACAGCG < SRR4302537.2245107/94‑1 (MQ=60)
GCCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCAATTACAGCG < SRR4302537.651418/94‑1 (MQ=60)
CCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCAATTACAGCGC > SRR4302537.3103589/1‑94 (MQ=60)
CCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCAATTACAGCGC > SRR4302537.4151769/1‑94 (MQ=60)
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GCTGAAACACCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGTCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCAATTACAGCGC > NC_000913/2936441‑2936626
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
