Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,015,070 |
T→C |
G330G (GGT→GGC) |
b2878 → |
putative oxidoreductase Fe‑S subunit |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,015,070 | 0 | T | C | 100.0%
| 976.2
/ NA
| 281 | G330G (GGT→GGC) | b2878 | putative oxidoreductase Fe‑S subunit |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (156/125); total (156/125) |
Only 100 of 286 total aligned reads displayed.
GATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGTGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAACTGCC > NC_000913/3014980‑3015159
|
tGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAag < 2:3077755/93‑1 (MQ=255)
tGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAag < 1:1382337/93‑1 (MQ=255)
gCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAagag > 1:1046584/1‑93 (MQ=255)
cACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAgaga < 2:2092876/93‑1 (MQ=255)
aCTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGAt > 2:874264/1‑93 (MQ=255)
cTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATg < 2:5146385/93‑1 (MQ=255)
cTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATg > 1:2233211/1‑93 (MQ=255)
tGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGt < 2:4230930/93‑1 (MQ=255)
tGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGt > 2:5536564/1‑93 (MQ=255)
tGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGt > 2:684764/1‑93 (MQ=255)
tGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGt > 1:463472/1‑93 (MQ=255)
tGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGt < 1:4444334/93‑1 (MQ=255)
tGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGt > 1:2521587/1‑93 (MQ=255)
gCAAAAGAAAAATCACTCGGGTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGtat < 1:2433411/93‑1 (MQ=255)
gCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGtat < 2:187327/93‑1 (MQ=255)
aaaaGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTatat > 2:2703761/1‑93 (MQ=255)
aaaaGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTatat < 1:2047431/93‑1 (MQ=255)
aaaGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATg > 1:6291574/1‑93 (MQ=255)
aaaGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATg > 1:4114291/1‑93 (MQ=255)
aaGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGt > 1:1927735/1‑93 (MQ=255)
aaGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGt < 1:1799091/93‑1 (MQ=255)
aGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTc < 2:3129993/93‑1 (MQ=255)
gAAAAATCACTCGGCTTTGGCGTAAAGCTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCa < 1:2602356/93‑1 (MQ=255)
aaaaTCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAgg > 1:5561473/1‑93 (MQ=255)
aTCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCg < 2:3269653/93‑1 (MQ=255)
tCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGt > 2:6346226/1‑93 (MQ=255)
aCTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTgc < 1:5916504/93‑1 (MQ=255)
aCTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTgc > 2:2024251/1‑93 (MQ=255)
aCTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTgc < 1:4247462/93‑1 (MQ=255)
tCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGTCTGGCGAAGAGATGTATATGTCAGGCCGTgcgc > 2:3869540/1‑93 (MQ=255)
tCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTgcgc < 2:3589842/93‑1 (MQ=255)
cGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCt < 2:3541102/93‑1 (MQ=255)
cGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCt > 1:798503/1‑93 (MQ=255)
gCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGt < 2:4758776/93‑1 (MQ=255)
tttGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTc < 2:2437894/93‑1 (MQ=255)
tttGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTc > 1:6145554/1‑93 (MQ=255)
ttGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTcc > 1:57698/1‑93 (MQ=255)
tGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTccc < 2:2294044/93‑1 (MQ=255)
ggCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCg < 1:2748005/93‑1 (MQ=255)
gCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGc < 2:1773246/93‑1 (MQ=255)
gCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGc < 2:1089895/93‑1 (MQ=255)
gTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGctc < 1:1963825/93‑1 (MQ=255)
aaaaCTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCtctc > 2:3716812/1‑93 (MQ=255)
aaaCTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTcc > 2:162234/1‑93 (MQ=255)
aCTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCAt > 1:111401/1‑93 (MQ=255)
aCTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCAt < 2:3026183/93‑1 (MQ=255)
cTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATc > 1:5292694/1‑93 (MQ=255)
cTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATc < 2:2682108/93‑1 (MQ=255)
tGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCa > 1:1465419/1‑93 (MQ=255)
gACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCaa < 2:5119586/93‑1 (MQ=255)
gACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCaa > 1:5131952/1‑93 (MQ=255)
gACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCaa > 1:3019626/1‑93 (MQ=255)
tAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGt < 1:2392694/93‑1 (MQ=255)
acacTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTg > 2:5389466/1‑93 (MQ=255)
cacTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTgc < 1:6379763/93‑1 (MQ=255)
cacTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTgc > 2:12825/1‑93 (MQ=255)
cacTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTgc < 1:4346443/93‑1 (MQ=255)
tctcGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTgcagc > 1:3608808/1‑93 (MQ=255)
tctcGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTgcagc > 1:3505675/1‑93 (MQ=255)
tctcGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTgcagc < 1:6456876/93‑1 (MQ=255)
ctcGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTgcagca < 1:1610804/93‑1 (MQ=255)
cGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGt < 2:2552133/93‑1 (MQ=255)
cGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGt < 1:1669310/93‑1 (MQ=255)
ggCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCTCGCTCTCCATCAATGTTGCAGCAGtt > 2:2854204/1‑93 (MQ=255)
ggCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGtt > 2:3957787/1‑93 (MQ=255)
gCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTtc > 2:528370/1‑93 (MQ=255)
aCCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTtctc > 1:3814965/1‑93 (MQ=255)
ccATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTtctct > 1:3368081/1‑93 (MQ=255)
cATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTtctctc < 1:1291865/93‑1 (MQ=255)
aTCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTtctctct < 1:862356/93‑1 (MQ=255)
tCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTtctctctc < 2:3373021/93‑1 (MQ=255)
caacaaTAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTcg < 1:5386953/93‑1 (MQ=255)
aacaaTAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTcgc > 2:5796510/1‑93 (MQ=255)
aacaaTAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTcgc > 2:4514100/1‑93 (MQ=255)
aacaaTAAACGCCCCCTGCCTGGCGAAGAGATGTATATGTCCGGCCGTGCGCTGTTCCCCCTCTCCATCAATGTTGCAGCAGTTCTCTCTcgc < 2:5210669/93‑1 (MQ=255)
acaaTAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTcgcg > 1:4676460/1‑93 (MQ=255)
caaTAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCgcgc > 2:442374/1‑93 (MQ=255)
aTAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCt > 1:3254518/1‑93 (MQ=255)
tAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCtt > 2:1508196/1‑93 (MQ=255)
aaaGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCttt < 1:2845656/93‑1 (MQ=255)
aaGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTg > 1:2116063/1‑93 (MQ=255)
aaGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTg > 1:1246283/1‑93 (MQ=255)
aaGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTg > 1:6007890/1‑93 (MQ=255)
aaGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTg < 2:4541660/93‑1 (MQ=255)
aGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGa < 1:4001209/93‑1 (MQ=255)
ggCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGAc > 1:266893/1‑93 (MQ=255)
gcACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGc > 2:1382536/1‑93 (MQ=255)
aCTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCaa > 1:5668267/1‑93 (MQ=255)
cTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCaaa < 1:3091619/93‑1 (MQ=255)
cTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCaaa < 1:3186565/93‑1 (MQ=255)
cTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCaaa > 2:1932776/1‑93 (MQ=255)
tGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAAc > 1:1480114/1‑93 (MQ=255)
gCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAACt < 1:29614/93‑1 (MQ=255)
gCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAACt < 2:5677403/93‑1 (MQ=255)
ccTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAACTg < 2:2886417/93‑1 (MQ=255)
ccTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAACTg > 2:2777838/1‑93 (MQ=255)
ccTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAACTg > 2:6233015/1‑93 (MQ=255)
cTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGCTCTCTCTCGCGCCTTTGACGGCAAACTGc > 1:5026431/1‑93 (MQ=255)
tGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAACTGcc > 1:4559895/1‑93 (MQ=255)
tGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAACTGcc < 1:4812221/93‑1 (MQ=255)
|
GATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGTGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAACTGCC > NC_000913/3014980‑3015159
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGTGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAACTGCCCATT > NC_000913/3014977‑3015163
|
CCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGC > SRR4302537.778783/1‑94 (MQ=60)
CCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGC > SRR4302537.4337934/1‑94 (MQ=60)
CCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGC > SRR4302537.4829484/1‑94 (MQ=60)
TGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGA > SRR4302537.4706124/1‑94 (MQ=60)
TGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGA < SRR4302537.4762681/94‑1 (MQ=60)
ATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAG > SRR4302537.2800816/1‑94 (MQ=60)
TGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGA < SRR4302537.1391983/94‑1 (MQ=60)
GGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAG > SRR4302537.1053807/1‑94 (MQ=60)
GCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGA > SRR4302537.4255685/1‑94 (MQ=60)
ACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATG > SRR4302537.2248963/1‑94 (MQ=60)
CTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGT > SRR4302537.466662/1‑94 (MQ=60)
CTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGT > SRR4302537.1550264/1‑94 (MQ=60)
CTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGT > SRR4302537.2539290/1‑94 (MQ=60)
TGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTA < SRR4302537.4475029/94‑1 (MQ=60)
GGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTAT > SRR4302537.5512435/1‑94 (MQ=60)
GGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTAT < SRR4302537.3006567/94‑1 (MQ=60)
GCAAAAGAAAAATCACTCGGGTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATA < SRR4302537.2450555/94‑1 (MQ=60)
GCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATA < SRR4302537.5913285/94‑1 (MQ=60)
GCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATA < SRR4302537.4061760/94‑1 (MQ=60)
CAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATAT > SRR4302537.5247409/1‑94 (MQ=60)
CAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATAT < SRR4302537.3589402/94‑1 (MQ=60)
AAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATG > SRR4302537.5375720/1‑94 (MQ=60)
AAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATG < SRR4302537.2061785/94‑1 (MQ=60)
AAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATG < SRR4302537.2139737/94‑1 (MQ=60)
AAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATG > SRR4302537.4143031/1‑94 (MQ=60)
AAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATG > SRR4302537.6334687/1‑94 (MQ=60)
AAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGT > SRR4302537.345149/1‑94 (MQ=60)
AAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGT > SRR4302537.1941112/1‑94 (MQ=60)
AAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTC < SRR4302537.1811648/94‑1 (MQ=60)
GAAAAATCACTCGGCTTTGGCGTAAAGCTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAG < SRR4302537.2620551/94‑1 (MQ=60)
GAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAG < SRR4302537.5624618/94‑1 (MQ=60)
AAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGG > SRR4302537.6161233/1‑94 (MQ=60)
AAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGG > SRR4302537.1292384/1‑94 (MQ=60)
AAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGG > SRR4302537.5599478/1‑94 (MQ=60)
AAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGC < SRR4302537.6183506/94‑1 (MQ=60)
AAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGC > SRR4302537.3898767/1‑94 (MQ=60)
AAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGC > SRR4302537.835691/1‑94 (MQ=60)
AAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCC < SRR4302537.1905372/94‑1 (MQ=60)
AAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCC > SRR4302537.5648772/1‑94 (MQ=60)
TCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTG < SRR4302537.3072704/94‑1 (MQ=60)
ACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCG < SRR4302537.4276982/94‑1 (MQ=60)
ACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCG < SRR4302537.5957100/94‑1 (MQ=60)
CTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGC < SRR4302537.1947382/94‑1 (MQ=60)
TCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCT > SRR4302537.803984/1‑94 (MQ=60)
TCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCT < SRR4302537.1697104/94‑1 (MQ=60)
CGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTG > SRR4302537.1976864/1‑94 (MQ=60)
GGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGT > SRR4302537.45185/1‑94 (MQ=60)
GCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTT > SRR4302537.1481551/1‑94 (MQ=60)
CTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTC > SRR4302537.1292287/1‑94 (MQ=60)
CTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTC > SRR4302537.6187822/1‑94 (MQ=60)
TTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCC > SRR4302537.58123/1‑94 (MQ=60)
TTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCC > SRR4302537.312087/1‑94 (MQ=60)
TGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCG > SRR4302537.443859/1‑94 (MQ=60)
TGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCG > SRR4302537.5917610/1‑94 (MQ=60)
GGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGC > SRR4302537.338069/1‑94 (MQ=60)
GGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGC > SRR4302537.6279604/1‑94 (MQ=60)
GGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGC < SRR4302537.2767171/94‑1 (MQ=60)
GTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCT < SRR4302537.1977481/94‑1 (MQ=60)
GTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCT < SRR4302537.4045783/94‑1 (MQ=60)
GTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCT > SRR4302537.5026089/1‑94 (MQ=60)
GTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCT > SRR4302537.2617964/1‑94 (MQ=60)
GTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCT < SRR4302537.4217436/94‑1 (MQ=60)
AAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCA > SRR4302537.6271620/1‑94 (MQ=60)
AAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCA > SRR4302537.6473790/1‑94 (MQ=60)
AACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCAT > SRR4302537.4697194/1‑94 (MQ=60)
AACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCAT > SRR4302537.112217/1‑94 (MQ=60)
AACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCAT > SRR4302537.1651486/1‑94 (MQ=60)
AACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCAT < SRR4302537.2754584/94‑1 (MQ=60)
ACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATC > SRR4302537.5329067/1‑94 (MQ=60)
ACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATC < SRR4302537.5068584/94‑1 (MQ=60)
CTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCA > SRR4302537.1475615/1‑94 (MQ=60)
CTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCA > SRR4302537.193395/1‑94 (MQ=60)
CTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCA < SRR4302537.4367709/94‑1 (MQ=60)
TGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAA > SRR4302537.5167316/1‑94 (MQ=60)
TGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAA > SRR4302537.3040676/1‑94 (MQ=60)
TGACNAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAA < SRR4302537.2019375/94‑1 (MQ=60)
GACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAAT > SRR4302537.4296994/1‑94 (MQ=60)
GACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAAT < SRR4302537.4649338/94‑1 (MQ=60)
GACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAAT > SRR4302537.5041062/1‑94 (MQ=60)
ACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATG > SRR4302537.3224014/1‑94 (MQ=60)
CTAGCGCTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGT < SRR4302537.5666531/94‑1 (MQ=60)
CTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGT > SRR4302537.2033356/1‑94 (MQ=60)
CTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGT > SRR4302537.2436533/1‑94 (MQ=60)
TAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTT < SRR4302537.2409546/94‑1 (MQ=60)
CACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCA < SRR4302537.6423258/94‑1 (MQ=60)
CACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCA < SRR4302537.4376573/94‑1 (MQ=60)
CACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCA > SRR4302537.151341/1‑94 (MQ=60)
CACTCTCGGCACCATCAACAATAAAGGAGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCCTCAATGTTGCA > SRR4302537.1441074/1‑94 (MQ=60)
ACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAG < SRR4302537.2443057/94‑1 (MQ=60)
CTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGC > SRR4302537.3530480/1‑94 (MQ=60)
CTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGC > SRR4302537.3051106/1‑94 (MQ=60)
CTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGC < SRR4302537.3189355/94‑1 (MQ=60)
CTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGC > SRR4302537.3634246/1‑94 (MQ=60)
TCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCA < SRR4302537.266093/94‑1 (MQ=60)
TCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCA < SRR4302537.1128392/94‑1 (MQ=60)
TCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCA < SRR4302537.6500642/94‑1 (MQ=60)
CTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAG < SRR4302537.3392235/94‑1 (MQ=60)
CTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAG < SRR4302537.5731293/94‑1 (MQ=60)
CTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAG > SRR4302537.2777225/1‑94 (MQ=60)
CTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAG < SRR4302537.1622063/94‑1 (MQ=60)
CTCGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAG > SRR4302537.2584540/1‑94 (MQ=60)
CGGCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTT < SRR4302537.1681004/94‑1 (MQ=60)
GCACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCT < SRR4302537.3832112/94‑1 (MQ=60)
CACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTC > SRR4302537.3841716/1‑94 (MQ=60)
ACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCT < SRR4302537.2746952/94‑1 (MQ=60)
ACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCT > SRR4302537.3391939/1‑94 (MQ=60)
ACCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCT > SRR4302537.4435988/1‑94 (MQ=60)
CCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTC > SRR4302537.849001/1‑94 (MQ=60)
CCATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTC < SRR4302537.1477565/94‑1 (MQ=60)
CATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCT > SRR4302537.5087138/1‑94 (MQ=60)
CATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCT < SRR4302537.1300848/94‑1 (MQ=60)
CATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCT < SRR4302537.1736463/94‑1 (MQ=60)
ATCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTC < SRR4302537.868271/94‑1 (MQ=60)
TCAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCG < SRR4302537.2066109/94‑1 (MQ=60)
CAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGC > SRR4302537.4657164/1‑94 (MQ=60)
CAACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGC < SRR4302537.5423770/94‑1 (MQ=60)
AACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCG > SRR4302537.4708814/1‑94 (MQ=60)
AACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCG > SRR4302537.643760/1‑94 (MQ=60)
AACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCG > SRR4302537.2483509/1‑94 (MQ=60)
AACAATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCG > SRR4302537.3326010/1‑94 (MQ=60)
AATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCT > SRR4302537.2038004/1‑94 (MQ=60)
AATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCT > SRR4302537.3277466/1‑94 (MQ=60)
ATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTT < SRR4302537.1318991/94‑1 (MQ=60)
ATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTT > SRR4302537.2910015/1‑94 (MQ=60)
ATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTT > SRR4302537.1077921/1‑94 (MQ=60)
ATAAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTT > SRR4302537.5200274/1‑94 (MQ=60)
AAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTG > SRR4302537.6049171/1‑94 (MQ=60)
AAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTG > SRR4302537.1254964/1‑94 (MQ=60)
AAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTG > SRR4302537.2130971/1‑94 (MQ=60)
AAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTG > SRR4302537.3902280/1‑94 (MQ=60)
AAAGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTG < SRR4302537.2865576/94‑1 (MQ=60)
AGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGAC > SRR4302537.268765/1‑94 (MQ=60)
AGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGAC < SRR4302537.4029219/94‑1 (MQ=60)
AGGCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGAC < SRR4302537.4781413/94‑1 (MQ=60)
GCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGG < SRR4302537.2160970/94‑1 (MQ=60)
GCGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGG < SRR4302537.2501268/94‑1 (MQ=60)
CGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGC < SRR4302537.5717173/94‑1 (MQ=60)
CGCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGC > SRR4302537.3009133/1‑94 (MQ=60)
GCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCA > SRR4302537.746423/1‑94 (MQ=60)
GCACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCA < SRR4302537.2105008/94‑1 (MQ=60)
CACTGCCTGGCGAAGAGATGTTTATGTCAGGCCGTGTGCTGTTTCCTCTCTCCATCAATGTTTCATCTGATCTCTCTCGCGCCTTTGACGTCAA > SRR4302537.6522066/1‑94 (MQ=44)
CACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAA > SRR4302537.5707052/1‑94 (MQ=60)
CACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAA > SRR4302537.5960381/1‑94 (MQ=60)
ACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAC > SRR4302537.634023/1‑94 (MQ=60)
ACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAA > SRR4302537.481953/1‑94 (MQ=60)
ACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAA > SRR4302537.2311204/1‑94 (MQ=60)
ACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAA < SRR4302537.367976/94‑1 (MQ=60)
ACTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCGCTCGCGCCTTTGACGGCAAA > SRR4302537.1309088/1‑94 (MQ=60)
CTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAAC < SRR4302537.5997705/94‑1 (MQ=60)
CTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAAC < SRR4302537.3113184/94‑1 (MQ=60)
CTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAAC < SRR4302537.3208980/94‑1 (MQ=60)
CTGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAAC > SRR4302537.1490408/1‑94 (MQ=60)
TGCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAACT < SRR4302537.139550/94‑1 (MQ=60)
GCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAACTG < SRR4302537.2632719/94‑1 (MQ=60)
GCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAACTG < SRR4302537.29852/94‑1 (MQ=60)
GCCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAACTG < SRR4302537.5558939/94‑1 (MQ=60)
CCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAACTGC > SRR4302537.3224127/1‑94 (MQ=60)
CCTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGCTCTCTCTCGCGCCTTTGACGGCAAACTGC > SRR4302537.5061046/1‑94 (MQ=60)
CTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAACTGCC > SRR4302537.4591456/1‑94 (MQ=60)
CTGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAACTGCC < SRR4302537.1216619/94‑1 (MQ=60)
TGGCGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAACTGCCC < SRR4302537.4845442/94‑1 (MQ=60)
CGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCTCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAACCTGCCCATT > SRR4302537.3689435/1‑94 (MQ=60)
CGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAACTGCCCATT > SRR4302537.1030735/1‑94 (MQ=60)
CGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAACTGCCCATT < SRR4302537.4206617/94‑1 (MQ=60)
CGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAACTGCCCATT < SRR4302537.3137705/94‑1 (MQ=60)
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CCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGTGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAACTGCCCATT > NC_000913/3014977‑3015163
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |