Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 882 254.4 12957588 98.0% 12698436 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,107,469 +C intergenic (‑296/‑101) b2965 ← / → yqgA ornithine decarboxylase isozyme/putative transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,107,4691.C99.6% 932.2 / ‑4.2 270intergenic (‑296/‑101)b2965/yqgAornithine decarboxylase isozyme/putative transport protein
Reads supporting (aligned to +/- strand):  ref base . (0/1);  new base C (124/145);  total (124/146)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 298 total aligned reads displayed.

GAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑T‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGC  >  NC_000913/3107377‑3107555
                                                                                              |                                                                                      
gAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCtt‑t                                                                                         <  2:1369337/93‑1 (MQ=255)
gAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATAGCACCtt‑t                                                                                         >  1:4504990/1‑93 (MQ=255)
 aagcGGCTATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGTCCAAACTCCGTACAGAGAGTAGAAAATTCGCGCAATCATGGCACCtt‑tc                                                                                        <  2:5402801/90‑2 (MQ=255)
 aaaCGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCtt‑tc                                                                                        <  1:2125537/93‑2 (MQ=255)
    cGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCtt‑tcgct                                                                                     >  2:2667196/1‑89 (MQ=255)
      gCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTaa                                                                                   <  2:3616737/93‑1 (MQ=255)
       cGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTaaa                                                                                  <  1:1003883/93‑1 (MQ=255)
       cGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTaaa                                                                                  <  2:3775945/93‑1 (MQ=255)
         aTAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGc                                                                                <  1:39575/93‑1 (MQ=255)
         aTAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGc                                                                                <  1:4250709/93‑1 (MQ=255)
         aTAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGc                                                                                >  1:3042471/1‑93 (MQ=255)
          tAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCg                                                                               >  2:4106447/1‑93 (MQ=255)
           aaGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGt                                                                              <  2:25523/93‑1 (MQ=255)
           aaGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGt                                                                              >  2:304934/1‑93 (MQ=255)
            aGCGATAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTg                                                                             >  1:1751262/1‑93 (MQ=255)
            aGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTg                                                                             >  2:4491943/1‑93 (MQ=255)
             gCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGc                                                                            <  2:4305703/93‑1 (MQ=255)
             gCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGc                                                                            >  2:4638492/1‑93 (MQ=255)
              cGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCa                                                                           <  2:4349418/93‑1 (MQ=255)
               gagagaATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCaa                                                                          <  1:2160/93‑1 (MQ=255)
                 gagaATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGc                                                                        <  1:2903889/93‑1 (MQ=255)
                  agaATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGcc                                                                       <  1:190855/93‑1 (MQ=255)
                  agaATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGcc                                                                       <  1:1074278/93‑1 (MQ=255)
                   gaATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCa                                                                      >  2:1305036/1‑93 (MQ=255)
                   gaATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCa                                                                      <  1:3532576/93‑1 (MQ=255)
                    aaTGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAg                                                                     >  2:2699128/1‑93 (MQ=255)
                    aaTGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAg                                                                     <  1:20578/93‑1 (MQ=255)
                    aaTGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAg                                                                     <  1:1365525/93‑1 (MQ=255)
                       gTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGAc                                                                  <  1:4927124/93‑1 (MQ=255)
                       gTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGAc                                                                  >  2:830652/1‑93 (MQ=255)
                        tAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACt                                                                 >  2:1720610/1‑93 (MQ=255)
                         aaGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACtt                                                                <  2:4848239/93‑1 (MQ=255)
                          aGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACttt                                                               >  1:975027/1‑93 (MQ=255)
                           ggAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTg                                                              >  1:2822653/1‑93 (MQ=255)
                              gaTGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGa                                                           >  2:5673908/1‑93 (MQ=255)
                              gaTGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGa                                                           <  1:5189748/93‑1 (MQ=255)
                               aTGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGaa                                                          >  1:6346682/1‑93 (MQ=255)
                                tgacGTGCATCGGGCAAACACCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGaac                                                         <  2:5834772/90‑1 (MQ=255)
                                tGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGaac                                                         >  2:2967018/1‑93 (MQ=255)
                                  gCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGaacaa                                                       >  2:6183450/1‑93 (MQ=255)
                                    gTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGaacaaac                                                     <  2:5165865/93‑1 (MQ=255)
                                    gTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGaacaaac                                                     <  1:5682562/93‑1 (MQ=255)
                                     tGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGaacaaaca                                                    <  2:6371976/93‑1 (MQ=255)
                                     tGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGaacaaaca                                                    >  2:5518857/1‑93 (MQ=255)
                                      gCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAacaaacaa                                                   <  1:1972376/93‑1 (MQ=255)
                                      gCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAacaaacaa                                                   <  2:6110916/93‑1 (MQ=255)
                                       cATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAg                                                  <  1:343115/93‑1 (MQ=255)
                                        aTCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGc                                                 >  2:1084216/1‑93 (MQ=255)
                                        aTCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGc                                                 >  2:5252958/1‑93 (MQ=255)
                                        aTCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGc                                                 >  1:3192408/1‑93 (MQ=255)
                                         tCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGcc                                                <  1:2630352/93‑1 (MQ=255)
                                          cGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCa                                               <  1:6047607/93‑1 (MQ=255)
                                           gggCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCAt                                              <  1:2552052/93‑1 (MQ=255)
                                            ggCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCTCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATc                                             <  1:3461972/93‑1 (MQ=255)
                                              cAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGa                                           >  1:2344221/1‑93 (MQ=255)
                                                agcTCCGTACAGAGAGGAGAAAATTCGCGAAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACg                                         <  1:5921930/91‑1 (MQ=255)
                                                aaCTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACg                                         >  1:5106537/1‑93 (MQ=255)
                                                 aCTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACgg                                        <  1:116598/93‑1 (MQ=255)
                                                 aCTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACgg                                        <  1:1803101/93‑1 (MQ=255)
                                                  cTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGc                                       >  1:6120499/1‑93 (MQ=255)
                                                   tacGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCa                                      >  2:3371482/3‑93 (MQ=255)
                                                     cGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCAcc                                    <  1:5550561/93‑1 (MQ=255)
                                                       tACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCaa                                  >  2:1064504/1‑93 (MQ=255)
                                                        aCAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCaaa                                 <  2:4243016/93‑1 (MQ=255)
                                                        aCAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCaaa                                 <  1:1512769/93‑1 (MQ=255)
                                                          agagagGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACg                               >  1:4313965/1‑93 (MQ=255)
                                                          agagagGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACg                               <  2:352455/93‑1 (MQ=255)
                                                           gagagGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACgg                              >  1:1105447/1‑93 (MQ=255)
                                                           gagagGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACgg                              <  2:1861974/93‑1 (MQ=255)
                                                           aagagGAGAAAATTCGCGCAATCATGGCACATT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACgg                              <  1:2485465/92‑1 (MQ=255)
                                                            agagGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGt                             >  1:3336017/1‑93 (MQ=255)
                                                            agagGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGt                             <  2:1180719/93‑1 (MQ=255)
                                                              aggagAAAATTCGCGCAATCATGGCACCTTAC‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCa                           <  2:769080/93‑1 (MQ=255)
                                                              aggagAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCa                           <  1:724377/93‑1 (MQ=255)
                                                               ggagAAAATTCGAGCAATCATGGCACCTTAG‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTAat                          <  1:2244836/93‑1 (MQ=255)
                                                                gagaAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCata                         >  1:1703042/1‑93 (MQ=255)
                                                                  gaAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCataat                       <  1:3839476/93‑1 (MQ=255)
                                                                  gaAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCataat                       <  2:3489796/93‑1 (MQ=255)
                                                                  gaAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCataat                       >  2:391412/1‑93 (MQ=255)
                                                                  aaaaaTTGGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGACCAAACAAGCCATCGACGGCACCAAACGGTCataat                       <  2:3205560/92‑1 (MQ=255)
                                                                   aaaaTTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCataata                      <  1:412326/93‑1 (MQ=255)
                                                                    aaaTTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCAtaataa                     <  2:3280977/93‑1 (MQ=255)
                                                                    aaaTTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGACATCGACGGCACCAAACGGTCAtaataa                     <  2:4909051/93‑1 (MQ=255)
                                                                     aaTTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAg                    <  2:4583455/93‑1 (MQ=255)
                                                                      aTTCGCGCAATCATGGCACCTT‑TCTCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGa                   <  2:5730307/93‑1 (MQ=255)
                                                                      aTTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGa                   >  2:6082932/1‑93 (MQ=255)
                                                                        tCGCTCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGaaa                 <  2:1607595/93‑1 (MQ=255)
                                                                        tCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGaaa                 <  2:2406204/93‑1 (MQ=255)
                                                                        tCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGaaa                 <  1:4586605/93‑1 (MQ=255)
                                                                          gcgcAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAAt               <  2:3869392/93‑1 (MQ=255)
                                                                          gcgcAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAAt               <  1:665929/93‑1 (MQ=255)
                                                                          gcgcAATCATCGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACAAAACGGTCATAATAAGAAAAt               >  2:1547670/1‑93 (MQ=255)
                                                                              aaTCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCaaa           <  2:5003377/93‑1 (MQ=255)
                                                                                tCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACa         >  1:4767478/1‑93 (MQ=255)
                                                                                    ggCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATAc     <  2:2185650/93‑1 (MQ=255)
                                                                                     gCACCTT‑TCGCTAACGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACa    <  1:3086583/93‑1 (MQ=255)
                                                                                     gCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACa    <  2:1972115/93‑1 (MQ=255)
                                                                                      cACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAg   >  2:5928597/1‑93 (MQ=255)
                                                                                      cACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAg   >  1:4371661/1‑93 (MQ=255)
                                                                                      cACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAg   <  1:2684973/93‑1 (MQ=255)
                                                                                              |                                                                                      
GAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑T‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGC  >  NC_000913/3107377‑3107555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CGAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑T‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAACAGG  >  NC_000913/3107376‑3107562
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CGAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑T                                                                                                <  SRR4302537.5658164/94‑1 (MQ=60)
CGAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑T                                                                                                >  SRR4302537.2115560/1‑94 (MQ=60)
CGAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑T                                                                                                >  SRR4302537.3094708/1‑94 (MQ=60)
CGAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATAGCACCTT‑T                                                                                                >  SRR4302537.4536142/1‑94 (MQ=60)
 GAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑T‑C                                                                                              >  SRR4302537.1348915/1‑94 (MQ=60)
  AAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑Tcg                                                                                              <  SRR4302537.2140490/94‑3 (MQ=60)
   AACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑Tcgc                                                                                             >  SRR4302537.2428670/1‑91 (MQ=60)
    ACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCT                                                                                            <  SRR4302537.2144487/94‑1 (MQ=60)
    ACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCT                                                                                            >  SRR4302537.6045141/1‑94 (MQ=60)
     CGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTA                                                                                           <  SRR4302537.5944928/94‑1 (MQ=60)
     CGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTA                                                                                           <  SRR4302537.2698284/94‑1 (MQ=60)
      GGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGCGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAA                                                                                          >  SRR4302537.231398/1‑94 (MQ=60)
        CGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAG                                                                                        >  SRR4302537.1182733/1‑94 (MQ=60)
        CGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAG                                                                                        <  SRR4302537.1010814/94‑1 (MQ=60)
         GATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGC                                                                                       >  SRR4302537.3063668/1‑94 (MQ=60)
          ATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCG                                                                                      <  SRR4302537.1998683/94‑1 (MQ=60)
          ATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCG                                                                                      <  SRR4302537.39875/94‑1 (MQ=60)
          ATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCG                                                                                      <  SRR4302537.4280253/94‑1 (MQ=60)
           TAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGT                                                                                     <  SRR4302537.1925158/94‑1 (MQ=60)
            AAGCGATAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTG                                                                                    >  SRR4302537.1763467/1‑94 (MQ=60)
            AAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGATAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTG                                                                                    <  SRR4302537.4409235/94‑1 (MQ=60)
            AAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTG                                                                                    >  SRR4302537.3001423/1‑94 (MQ=60)
            AAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTG                                                                                    <  SRR4302537.2195794/94‑1 (MQ=60)
              GCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCA                                                                                  <  SRR4302537.3048695/94‑1 (MQ=60)
              GCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCA                                                                                  <  SRR4302537.6101822/94‑1 (MQ=60)
               CGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAA                                                                                 >  SRR4302537.4813481/1‑94 (MQ=60)
                GAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAG                                                                                <  SRR4302537.2174/94‑1 (MQ=60)
                GAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAG                                                                                >  SRR4302537.3550216/1‑94 (MQ=60)
                GAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAG                                                                                >  SRR4302537.3761771/1‑94 (MQ=60)
                GAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAG                                                                                <  SRR4302537.4544388/94‑1 (MQ=60)
                GAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAG                                                                                <  SRR4302537.2408838/94‑1 (MQ=60)
                GAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAG                                                                                <  SRR4302537.5587617/94‑1 (MQ=60)
                  GAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCC                                                                              >  SRR4302537.5534756/1‑94 (MQ=60)
                  GAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCC                                                                              <  SRR4302537.2924291/94‑1 (MQ=60)
                  GAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCC                                                                              <  SRR4302537.5189728/94‑1 (MQ=60)
                   AGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCA                                                                             <  SRR4302537.192211/94‑1 (MQ=60)
                   AGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCA                                                                             <  SRR4302537.1081676/94‑1 (MQ=60)
                   AGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCA                                                                             >  SRR4302537.6304446/1‑94 (MQ=60)
                   AGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCA                                                                             >  SRR4302537.2686073/1‑94 (MQ=60)
                    GAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAG                                                                            >  SRR4302537.2635513/1‑94 (MQ=60)
                    GAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAG                                                                            <  SRR4302537.3557541/94‑1 (MQ=60)
                    GAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAG                                                                            >  SRR4302537.4394217/1‑94 (MQ=60)
                     AATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGG                                                                           <  SRR4302537.20740/94‑1 (MQ=60)
                     AATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGG                                                                           <  SRR4302537.1375041/94‑1 (MQ=60)
                     AATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGG                                                                           <  SRR4302537.5095467/94‑1 (MQ=60)
                      ATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGA                                                                          <  SRR4302537.21340/94‑1 (MQ=60)
                        GTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACT                                                                        >  SRR4302537.4827544/1‑94 (MQ=60)
                        GTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACT                                                                        <  SRR4302537.4961094/94‑1 (MQ=60)
                         TAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTT                                                                       >  SRR4302537.1748583/1‑94 (MQ=60)
                          AAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTT                                                                      >  SRR4302537.981751/1‑94 (MQ=60)
                          AAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTC                                                                      <  SRR4302537.1415821/94‑1 (MQ=60)
                           AGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTG                                                                     >  SRR4302537.6447494/1‑94 (MQ=60)
                           AGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTG                                                                     >  SRR4302537.2842382/1‑94 (MQ=60)
                            GGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGC                                                                    >  SRR4302537.984288/1‑94 (MQ=60)
                            GGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGC                                                                    >  SRR4302537.2228263/1‑94 (MQ=60)
                            GGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGC                                                                    <  SRR4302537.1135390/94‑1 (MQ=60)
                              AGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGA                                                                  >  SRR4302537.1930178/1‑94 (MQ=60)
                               GATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAA                                                                 <  SRR4302537.5225442/94‑1 (MQ=60)
                               GATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAA                                                                 >  SRR4302537.6390031/1‑94 (MQ=60)
                               GATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAA                                                                 <  SRR4302537.177437/94‑1 (MQ=60)
                                  GGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAA                                                              >  SRR4302537.5204347/1‑94 (MQ=60)
                                     GTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACA                                                           >  SRR4302537.2855575/1‑94 (MQ=60)
                                     GTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACA                                                           <  SRR4302537.1166363/94‑1 (MQ=60)
                                     GTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACA                                                           >  SRR4302537.3107561/1‑94 (MQ=60)
                                     GTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACA                                                           <  SRR4302537.5721427/94‑1 (MQ=60)
                                     GTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACA                                                           >  SRR4302537.2597058/1‑94 (MQ=60)
                                      TGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAA                                                          <  SRR4302537.2049026/94‑1 (MQ=60)
                                      TGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAA                                                          <  SRR4302537.281289/94‑1 (MQ=60)
                                      TGCATCGGGCAAACTCCGTACAGAGAGGAGAAAACTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAA                                                          <  SRR4302537.1871111/94‑1 (MQ=60)
                                       GCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAG                                                         <  SRR4302537.1986089/94‑1 (MQ=60)
                                       GCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAG                                                         >  SRR4302537.5798621/1‑94 (MQ=60)
                                       GCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAG                                                         <  SRR4302537.3890783/94‑1 (MQ=60)
                                        CATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGC                                                        <  SRR4302537.345497/94‑1 (MQ=60)
                                        CATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGC                                                        >  SRR4302537.504363/1‑94 (MQ=60)
                                        CATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGC                                                        >  SRR4302537.3214855/1‑94 (MQ=60)
                                        CATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGC                                                        <  SRR4302537.1097411/94‑1 (MQ=60)
                                        CATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACATT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGC                                                        >  SRR4302537.1456953/1‑94 (MQ=60)
                                         ATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCC                                                       <  SRR4302537.3946772/94‑1 (MQ=60)
                                         ATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCC                                                       <  SRR4302537.4343108/94‑1 (MQ=60)
                                         ATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCC                                                       >  SRR4302537.3444808/1‑94 (MQ=60)
                                          TCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCA                                                      <  SRR4302537.2648771/94‑1 (MQ=60)
                                           CGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCAT                                                     <  SRR4302537.6089138/94‑1 (MQ=60)
                                            GGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATC                                                    >  SRR4302537.1835870/1‑94 (MQ=60)
                                            GGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATC                                                    <  SRR4302537.2569950/94‑1 (MQ=60)
                                             GGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCTCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCG                                                   <  SRR4302537.3486446/94‑1 (MQ=60)
                                              GCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGA                                                  >  SRR4302537.2360728/1‑94 (MQ=60)
                                              GCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGA                                                  <  SRR4302537.1601205/94‑1 (MQ=60)
                                                AAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACG                                                >  SRR4302537.5141728/1‑94 (MQ=60)
                                                AAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACG                                                >  SRR4302537.4315928/1‑94 (MQ=60)
                                                AAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACG                                                >  SRR4302537.835124/1‑94 (MQ=60)
                                                AAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACG                                                <  SRR4302537.3144997/94‑1 (MQ=60)
                                                 AGCTCCGTACAGAGAGGAGAAAATTCGCGAAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGG                                               <  SRR4302537.5962563/94‑1 (MQ=60)
                                                 AACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGG                                               <  SRR4302537.897915/94‑1 (MQ=60)
                                                 AACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGG                                               >  SRR4302537.34729/1‑94 (MQ=60)
                                                  ACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGC                                              >  SRR4302537.6162568/1‑94 (MQ=60)
                                                  ACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGC                                              <  SRR4302537.117440/94‑1 (MQ=60)
                                                  ACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGC                                              <  SRR4302537.1815683/94‑1 (MQ=60)
                                                      CGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCA                                          >  SRR4302537.712747/1‑94 (MQ=60)
                                                      CGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCA                                          >  SRR4302537.4164634/1‑94 (MQ=60)
                                                      CGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCA                                          <  SRR4302537.5588464/94‑1 (MQ=60)
                                                         ACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAAC                                       <  SRR4302537.4525593/94‑1 (MQ=60)
                                                         ACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAAC                                       >  SRR4302537.2754506/1‑94 (MQ=60)
                                                         ACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAAC                                       <  SRR4302537.1523340/94‑1 (MQ=60)
                                                          CAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACG                                      <  SRR4302537.3474024/94‑1 (MQ=60)
                                                          CAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACG                                      >  SRR4302537.4343952/1‑94 (MQ=60)
                                                          CAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACG                                      >  SRR4302537.3308125/1‑94 (MQ=60)
                                                          CAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACG                                      <  SRR4302537.1106318/94‑1 (MQ=60)
                                                          CAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCAAGGACTTTGCGAACAAAAAAGCCATCGACGGCACCAAACG                                      >  SRR4302537.1746534/1‑94 (MQ=60)
                                                           AGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGG                                     >  SRR4302537.1113080/1‑94 (MQ=60)
                                                            GAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGT                                    >  SRR4302537.3359628/1‑94 (MQ=60)
                                                            AAGAGGAGAAAATTCGCGCAATCATGGCACATT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGT                                    <  SRR4302537.2502962/94‑1 (MQ=60)
                                                             AGAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTC                                   <  SRR4302537.255789/94‑1 (MQ=60)
                                                              GAGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCA                                  >  SRR4302537.1697817/1‑94 (MQ=60)
                                                               AGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCAT                                 <  SRR4302537.718720/94‑1 (MQ=60)
                                                               AGGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCAT                                 <  SRR4302537.729321/94‑1 (MQ=60)
                                                                GGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATA                                >  SRR4302537.1714947/1‑94 (MQ=60)
                                                                GGAGAAAATTCGCGCAATCATGGCACCTT‑TCGCAAAAGCGTGCAAGCCAGGAATTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATA                                <  SRR4302537.3547760/94‑1 (MQ=60)
                                                                GGAGAAAATTCGCACAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATA                                <  SRR4302537.3654082/94‑1 (MQ=60)
                                                                GGAGAAAATTCGAGCAATCATGGCACCTTAG‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTAATA                                <  SRR4302537.2260671/94‑1 (MQ=60)
                                                                 GAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAA                               <  SRR4302537.5667017/94‑1 (MQ=60)
                                                                 GAGAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAA                               >  SRR4302537.3428171/1‑94 (MQ=60)
                                                                   GAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATA                             <  SRR4302537.1801752/94‑1 (MQ=60)
                                                                   GAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATA                             <  SRR4302537.3866374/94‑1 (MQ=60)
                                                                   GAAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATA                             <  SRR4302537.3992113/94‑1 (MQ=60)
                                                                    AAAATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAA                            <  SRR4302537.415179/94‑1 (MQ=60)
                                                                      AATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGA                          <  SRR4302537.2286859/94‑1 (MQ=60)
                                                                      AATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGA                          <  SRR4302537.2143761/94‑1 (MQ=60)
                                                                      AATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGA                          >  SRR4302537.6045662/1‑94 (MQ=60)
                                                                       ATTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAA                         >  SRR4302537.6271000/1‑94 (MQ=60)
                                                                        TTCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAA                        <  SRR4302537.5596000/94‑1 (MQ=60)
                                                                         TCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAA                       <  SRR4302537.4618330/94‑1 (MQ=60)
                                                                         TCGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAA                       >  SRR4302537.435581/1‑94 (MQ=60)
                                                                          CGCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAAT                      <  SRR4302537.4568514/94‑1 (MQ=60)
                                                                           GCGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATC                     <  SRR4302537.670469/94‑1 (MQ=60)
                                                                            CGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCA                    >  SRR4302537.2909374/1‑94 (MQ=60)
                                                                            CGCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCA                    >  SRR4302537.3165732/1‑94 (MQ=60)
                                                                             GCAATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAA                   >  SRR4302537.6118163/1‑94 (MQ=60)
                                                                               AATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAAC                 >  SRR4302537.2503026/1‑94 (MQ=60)
                                                                                ATCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACA                >  SRR4302537.4800400/1‑94 (MQ=60)
                                                                                 TCATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAA               <  SRR4302537.4640347/94‑1 (MQ=60)
                                                                                  CATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAAT              >  SRR4302537.6491905/1‑94 (MQ=60)
                                                                                   ATGGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATA             >  SRR4302537.4037855/1‑94 (MQ=60)
                                                                                   ATGCCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATA             <  SRR4302537.4251818/94‑1 (MQ=60)
                                                                                     GGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACA           >  SRR4302537.3222166/1‑94 (MQ=60)
                                                                                     GGCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACA           <  SRR4302537.1074963/94‑1 (MQ=60)
                                                                                      GCACCTT‑TCGCTAACGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAG          <  SRR4302537.3108089/94‑1 (MQ=60)
                                                                                      GCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAG          >  SRR4302537.4401866/1‑94 (MQ=60)
                                                                                      GCACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAG          >  SRR4302537.4716855/1‑94 (MQ=60)
                                                                                       CACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGC         <  SRR4302537.2703717/94‑1 (MQ=60)
                                                                                        ACCTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCT        >  SRR4302537.5481236/1‑94 (MQ=60)
                                                                                          CTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAA      >  SRR4302537.405752/1‑94 (MQ=60)
                                                                                          CTT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAA      >  SRR4302537.5721666/1‑94 (MQ=60)
                                                                                           TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAAC     <  SRR4302537.4836028/94‑1 (MQ=60)
                                                                                           TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAAC     <  SRR4302537.1732635/94‑1 (MQ=60)
                                                                                              C‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAACAGG  >  SRR4302537.2888043/1‑94 (MQ=60)
                                                                                              |                                                                                              
CGAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑T‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAACAGG  >  NC_000913/3107376‑3107562

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑