Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,122,609 |
T→C |
E643E (GAA→GAG) |
glcF ← |
glycolate oxidase iron‑sulfur subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,122,609 | 0 | T | C | 99.6%
| 796.7
/ ‑5.3
| 233 | E643E (GAA→GAG) | glcF | glycolate oxidase iron‑sulfur subunit |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (106/126); total (106/127) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 |
Only 100 of 251 total aligned reads displayed.
TTCGCCGTTCAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGTTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCATCTG > NC_000913/3122519‑3122698
|
ttCGCCGTTCAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTc > 1:4048532/1‑93 (MQ=255)
tCGCCGTTCAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTcc > 1:1170001/1‑93 (MQ=255)
gCCGTTCAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGctcctc < 2:5910033/93‑1 (MQ=255)
gCCGTTCAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGctcctc < 2:3430511/93‑1 (MQ=255)
gCCGTTCAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGctcctc > 2:3881169/1‑93 (MQ=255)
gCCGTTCAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGctcctc > 1:3454386/1‑93 (MQ=255)
cGTTCAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTcgc < 1:4456264/93‑1 (MQ=255)
cGTTCAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTcgc > 2:3393733/1‑93 (MQ=255)
gTTCAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTcgcg > 2:2256335/1‑93 (MQ=255)
ttCAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCgcgc > 1:5094609/1‑93 (MQ=255)
ttCAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCgcgc > 1:901520/1‑93 (MQ=255)
tCAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCa > 2:2745977/1‑93 (MQ=255)
aGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCCGa > 1:3805613/1‑93 (MQ=255)
aGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGa > 1:5869054/1‑93 (MQ=255)
aGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGa > 1:5276966/1‑93 (MQ=255)
gCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGaa > 2:901141/1‑93 (MQ=255)
gCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGaa < 1:2524002/93‑1 (MQ=255)
cTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAg > 2:4674096/1‑93 (MQ=255)
ttttGCGCATGTTGTAGGGTACACGGACAGTGGAAGGGCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCTGCTCGTCGCGCAGAAGt > 2:3351600/1‑93 (MQ=255)
ttttGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGt > 1:5238547/1‑93 (MQ=255)
tttGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGtt < 1:4676903/93‑1 (MQ=255)
ttGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTc < 2:6015338/93‑1 (MQ=255)
aTGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTaa > 2:5306694/1‑93 (MQ=255)
tgttgtAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTaaa < 2:5057296/93‑1 (MQ=255)
tgttgtAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTaaa > 2:5189453/1‑93 (MQ=255)
ttgtAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATc > 1:3587886/1‑93 (MQ=255)
ttgtAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATc < 2:4239232/93‑1 (MQ=255)
gtAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGa < 1:5075895/93‑1 (MQ=255)
tAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGAc < 1:3630752/93‑1 (MQ=255)
tAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGAc < 2:672610/93‑1 (MQ=255)
aGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGAcc < 2:4921056/93‑1 (MQ=255)
acGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGtt < 1:3970826/93‑1 (MQ=255)
acGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGtt > 1:14081/1‑93 (MQ=255)
cGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTc < 2:4304773/93‑1 (MQ=255)
ggACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCa > 1:3710341/1‑93 (MQ=255)
gACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCAc > 1:2313131/1‑93 (MQ=255)
gACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCAc < 1:4917237/93‑1 (MQ=255)
gACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCAc < 1:2995309/93‑1 (MQ=255)
aGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCActga < 2:1852249/93‑1 (MQ=255)
aGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCActga < 1:4125308/93‑1 (MQ=255)
gTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCActgac < 1:1326535/93‑1 (MQ=255)
ggAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCActgacct < 2:4135841/93‑1 (MQ=255)
ggAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCActgacct < 2:1055555/93‑1 (MQ=255)
aaGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCActgacctga < 2:1135745/93‑1 (MQ=255)
aGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCActgacctgac > 2:2910063/1‑93 (MQ=255)
ggCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACg < 1:6061735/93‑1 (MQ=255)
gCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGt > 1:170617/1‑93 (MQ=255)
gCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCAATGACCTGACGt < 1:2698777/93‑1 (MQ=255)
ccAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTg > 1:6112335/1‑93 (MQ=255)
ccAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTg > 1:448802/1‑93 (MQ=255)
cAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCAGACGTGc < 2:6363859/93‑1 (MQ=255)
gCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCtt < 1:5714248/93‑1 (MQ=255)
cTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCttt > 1:4272379/1‑93 (MQ=255)
cTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCttt > 2:1671777/1‑93 (MQ=255)
tttttATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTa > 2:439053/1‑93 (MQ=255)
tttATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATc < 2:2100362/93‑1 (MQ=255)
tttATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATc < 1:3391081/93‑1 (MQ=255)
ttATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCg < 1:2126354/93‑1 (MQ=255)
ttATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCg < 2:3173454/93‑1 (MQ=255)
ttATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCg > 1:3855102/1‑93 (MQ=255)
aTCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGc < 2:2077553/93‑1 (MQ=255)
aTCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGc > 2:4106994/1‑93 (MQ=255)
tCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCa < 1:3225564/93‑1 (MQ=255)
gccgcGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCata > 2:968651/1‑93 (MQ=255)
gccgcGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCata > 1:27852/1‑93 (MQ=255)
gccgcGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCata < 2:267978/93‑1 (MQ=255)
gccgcGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGAACGCCAGTTCACTGACCTGACGTGCTTTATCGGCata > 2:6054975/1‑93 (MQ=255)
gcgAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATaa < 2:6155943/93‑1 (MQ=255)
gcgAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATaa > 1:1622038/1‑93 (MQ=255)
ccgAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATaa < 1:136358/92‑1 (MQ=255)
gAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACg > 2:2848518/1‑93 (MQ=255)
ttGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCAt > 2:5358850/1‑93 (MQ=255)
tGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATc < 2:372271/93‑1 (MQ=255)
gCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCg > 1:5959073/1‑93 (MQ=255)
ccAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGt < 2:874159/93‑1 (MQ=255)
cAGTTTTTCCAGCGGCTCCTGGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGtt < 2:5652833/93‑1 (MQ=255)
cAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGtt > 1:4582082/1‑93 (MQ=255)
aGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGttt < 2:2386093/93‑1 (MQ=255)
aGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGttt < 1:3252596/93‑1 (MQ=255)
aGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGttt > 2:5573500/1‑93 (MQ=255)
aGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGttt > 1:5420103/1‑93 (MQ=255)
gTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGtttt < 1:1010936/93‑1 (MQ=255)
tttttCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGttttt < 2:4753267/93‑1 (MQ=255)
tttttCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGttttt < 1:3678305/93‑1 (MQ=255)
tttCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCa < 1:2419568/93‑1 (MQ=255)
ttCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAg < 2:4457305/93‑1 (MQ=255)
tCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGc < 2:1290493/93‑1 (MQ=255)
tCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGc < 2:3990797/93‑1 (MQ=255)
ccAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCa < 1:4093160/93‑1 (MQ=255)
cAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCAt < 1:4097246/93‑1 (MQ=255)
aGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCATc < 2:5729112/93‑1 (MQ=255)
aGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCATc > 1:6417231/1‑93 (MQ=255)
aGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCATc < 2:4878751/93‑1 (MQ=255)
aGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCATc < 2:3669672/93‑1 (MQ=255)
gCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCATCt > 2:5476944/1‑93 (MQ=255)
gCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCATCt > 1:4831457/1‑93 (MQ=255)
gCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCATCt > 2:5880075/1‑93 (MQ=255)
gCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTGCAGCATCt < 2:6316733/93‑1 (MQ=255)
cGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCATCTg < 1:1944838/93‑1 (MQ=255)
cGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCATCTg < 1:2906610/93‑1 (MQ=255)
|
TTCGCCGTTCAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGTTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCATCTG > NC_000913/3122519‑3122698
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CACTTCGCCGTTCAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGTTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCATCTGCCCA > NC_000913/3122516‑3122702
|
CACTTCGCCGTTCAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGC > SRR4302537.863058/1‑94 (MQ=60)
CTTCGCCGTTCAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTC > SRR4302537.4076839/1‑94 (MQ=60)
TTCGCCGTTCAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCC > SRR4302537.1178141/1‑94 (MQ=60)
TCGCCGTTCAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCT < SRR4302537.5293197/94‑1 (MQ=60)
TCGCCGTTCAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCT < SRR4302537.4521213/94‑1 (MQ=60)
CGCCGTTCAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTC > SRR4302537.3478817/1‑94 (MQ=60)
CGTTCAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCG < SRR4302537.4487039/94‑1 (MQ=60)
GTTCAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGC > SRR4302537.5129692/1‑94 (MQ=60)
GTTCAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGC > SRR4302537.907741/1‑94 (MQ=60)
CAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCCGA > SRR4302537.3832298/1‑94 (MQ=60)
CAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGA > SRR4302537.3666888/1‑94 (MQ=60)
CAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGA > SRR4302537.5909315/1‑94 (MQ=60)
CAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGA > SRR4302537.5313274/1‑94 (MQ=60)
AGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGGATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAA > SRR4302537.5993192/1‑94 (MQ=60)
GCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAG < SRR4302537.2541722/94‑1 (MQ=60)
CTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGT > SRR4302537.5274592/1‑94 (MQ=60)
CTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGT > SRR4302537.257883/1‑94 (MQ=60)
TTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTT < SRR4302537.6092348/94‑1 (MQ=60)
TTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTC > SRR4302537.4409610/1‑94 (MQ=60)
TTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTC < SRR4302537.4709258/94‑1 (MQ=60)
TTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTC < SRR4302537.5441846/94‑1 (MQ=60)
TTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTC < SRR4302537.2741987/94‑1 (MQ=60)
TTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCG < SRR4302537.1714290/94‑1 (MQ=60)
TTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCG < SRR4302537.443021/94‑1 (MQ=60)
TGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGA < SRR4302537.6093812/94‑1 (MQ=60)
GCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGAC < SRR4302537.987352/94‑1 (MQ=60)
GCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGAC < SRR4302537.5234955/94‑1 (MQ=60)
ATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAA < SRR4302537.1842234/94‑1 (MQ=60)
TGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAAT < SRR4302537.1635116/94‑1 (MQ=60)
GTTGTAGGGTCCACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATC < SRR4302537.264089/94‑1 (MQ=60)
GTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATC > SRR4302537.3613181/1‑94 (MQ=60)
GTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATC < SRR4302537.849241/94‑1 (MQ=60)
GTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATC < SRR4302537.3887000/94‑1 (MQ=60)
GTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATC < SRR4302537.3004724/94‑1 (MQ=60)
GTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGAC < SRR4302537.5110836/94‑1 (MQ=60)
TAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACC > SRR4302537.4026233/1‑94 (MQ=60)
TAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACC < SRR4302537.3656337/94‑1 (MQ=60)
GGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCC < SRR4302537.372027/94‑1 (MQ=60)
TACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAG > SRR4302537.3510520/1‑94 (MQ=60)
CACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTT > SRR4302537.14194/1‑94 (MQ=60)
ACGGGCAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCAAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTC < SRR4302537.1340196/94‑1 (MQ=60)
ACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTC > SRR4302537.2915444/1‑94 (MQ=60)
ACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTC < SRR4302537.3762589/94‑1 (MQ=60)
ACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTC < SRR4302537.3998615/94‑1 (MQ=60)
CGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCA > SRR4302537.3736421/1‑94 (MQ=60)
GGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCAC > SRR4302537.2329459/1‑94 (MQ=60)
GACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACT < SRR4302537.1225818/94‑1 (MQ=60)
GACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACT < SRR4302537.3016199/94‑1 (MQ=60)
GACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACT < SRR4302537.4951162/94‑1 (MQ=60)
GACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACT < SRR4302537.1401642/94‑1 (MQ=60)
ACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTG < SRR4302537.3867127/94‑1 (MQ=60)
ACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTG > SRR4302537.3769951/1‑94 (MQ=60)
AGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGAC < SRR4302537.4154098/94‑1 (MQ=60)
GTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACC < SRR4302537.1335781/94‑1 (MQ=60)
GTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACC > SRR4302537.5537006/1‑94 (MQ=60)
TGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCT < SRR4302537.3317812/94‑1 (MQ=60)
TGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCT < SRR4302537.6396972/94‑1 (MQ=60)
TGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCT > SRR4302537.2275587/1‑94 (MQ=60)
AAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGAC < SRR4302537.4135989/94‑1 (MQ=60)
AGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACG > SRR4302537.1392532/1‑94 (MQ=60)
AGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACG < SRR4302537.3123399/94‑1 (MQ=60)
AGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACG > SRR4302537.6116257/1‑94 (MQ=60)
AGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACG < SRR4302537.4079312/94‑1 (MQ=60)
GGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGT > SRR4302537.171832/1‑94 (MQ=60)
GGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGT < SRR4302537.6103385/94‑1 (MQ=60)
GCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTG > SRR4302537.451911/1‑94 (MQ=60)
GCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTG > SRR4302537.6154340/1‑94 (MQ=60)
GCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCAATGACCTGACGTG < SRR4302537.2717633/94‑1 (MQ=60)
tctGCTTTTTATCGCAGCTAATTGCCAGTTTTTCCAGCGGCTCCCCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGC < SRR4302537.1531518/91‑1 (MQ=60)
CAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCT > SRR4302537.4806449/1‑94 (MQ=60)
AGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTT > SRR4302537.5220951/1‑94 (MQ=60)
AGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTT > SRR4302537.1125289/1‑94 (MQ=60)
AGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTT < SRR4302537.5445456/94‑1 (MQ=60)
GCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTT < SRR4302537.5753354/94‑1 (MQ=60)
GCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTT > SRR4302537.4302065/1‑94 (MQ=60)
CTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTA < SRR4302537.4622111/94‑1 (MQ=60)
CTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTA > SRR4302537.4098966/1‑94 (MQ=60)
CTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTA > SRR4302537.4509920/1‑94 (MQ=60)
TTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTAT < SRR4302537.1969494/94‑1 (MQ=60)
TTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTAT < SRR4302537.2371981/94‑1 (MQ=60)
TTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTAT < SRR4302537.6419000/94‑1 (MQ=60)
TTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATC > SRR4302537.2478329/1‑94 (MQ=60)
TTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCG > SRR4302537.3882087/1‑94 (MQ=60)
TTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCG > SRR4302537.3644847/1‑94 (MQ=60)
TTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCG < SRR4302537.3415104/94‑1 (MQ=60)
TTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGG < SRR4302537.2141312/94‑1 (MQ=60)
TTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGG < SRR4302537.4925737/94‑1 (MQ=60)
TTATCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGG > SRR4302537.5122252/1‑94 (MQ=60)
TCGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCAT < SRR4302537.3248262/94‑1 (MQ=60)
CGCCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATA > SRR4302537.28070/1‑94 (MQ=60)
CCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATA < SRR4302537.3318930/94‑1 (MQ=60)
CCGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATA > SRR4302537.5842211/1‑94 (MQ=60)
CGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAA < SRR4302537.3695969/94‑1 (MQ=60)
CGCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAA > SRR4302537.1633385/1‑94 (MQ=60)
CCGAATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAAC < SRR4302537.137333/94‑1 (MQ=60)
AATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCA > SRR4302537.2129641/1‑94 (MQ=60)
ATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCAT < SRR4302537.4818230/94‑1 (MQ=60)
ATTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCAT < SRR4302537.3905838/94‑1 (MQ=60)
TTGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATC > SRR4302537.4123564/1‑94 (MQ=60)
TGCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCG > SRR4302537.5999975/1‑94 (MQ=60)
GCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGT < SRR4302537.4570574/94‑1 (MQ=60)
GCCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGT < SRR4302537.325545/94‑1 (MQ=60)
CCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTT < SRR4302537.3447009/94‑1 (MQ=60)
CCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTT < SRR4302537.1287062/94‑1 (MQ=60)
CCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTT > SRR4302537.4141437/1‑94 (MQ=60)
CCAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTT > SRR4302537.4613777/1‑94 (MQ=60)
CAGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTT > SRR4302537.5457039/1‑94 (MQ=60)
AGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTT < SRR4302537.3275532/94‑1 (MQ=60)
AGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTT > SRR4302537.4965529/1‑94 (MQ=60)
AGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTT < SRR4302537.4163921/94‑1 (MQ=60)
AGTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTT < SRR4302537.3570146/94‑1 (MQ=60)
GTTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTT < SRR4302537.1017905/94‑1 (MQ=60)
TTTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTC < SRR4302537.3704184/94‑1 (MQ=60)
TTTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCA < SRR4302537.5085513/94‑1 (MQ=60)
TTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAG < SRR4302537.2436620/94‑1 (MQ=60)
TTTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAG < SRR4302537.3184616/94‑1 (MQ=60)
TTCCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGC > SRR4302537.2392431/1‑94 (MQ=60)
CCAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCAT < SRR4302537.4121748/94‑1 (MQ=60)
CAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCATC < SRR4302537.4125853/94‑1 (MQ=60)
CAGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCATC > SRR4302537.6460870/1‑94 (MQ=60)
AGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCATCT > SRR4302537.5901303/1‑94 (MQ=60)
AGCGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCATCT > SRR4302537.4864823/1‑94 (MQ=60)
CGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCATCTGC < SRR4302537.2927029/94‑1 (MQ=60)
CGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCATCTGC < SRR4302537.1958356/94‑1 (MQ=60)
CGGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCATCTGC > SRR4302537.3403564/1‑94 (MQ=60)
CGGCTCCTCGCACAGAAGTGCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCATCTGC < SRR4302537.2927028/94‑1 (MQ=60)
GGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCATCTGCC > SRR4302537.805060/1‑94 (MQ=60)
GGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCATCTGCC > SRR4302537.2068090/1‑94 (MQ=60)
GGCTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCATCTGCC > SRR4302537.128637/1‑94 (MQ=60)
CTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCATCTGCCCA > SRR4302537.4415494/1‑94 (MQ=60)
|
CACTTCGCCGTTCAGCTTTTGCGCATGTTGTAGGGTACACGGACAGTGGAAGGCCAGCTTTTTATCGCCGCGAATTGCCAGTTTTTCCAGCGGTTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGTGCTTTATCGGCATATAACGCATCGTTTTTCAGCATCTGCCCA > NC_000913/3122516‑3122702
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
