Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,210,997 |
G→A |
E104K (GAA→AAA) |
rpoD → |
RNA polymerase sigma(70) |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,210,997 | 0 | G | A | 100.0%
| 803.9
/ NA
| 225 | E104K (GAA→AAA) | rpoD | RNA polymerase sigma(70) |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (107/118); total (107/118) |
Only 100 of 234 total aligned reads displayed.
GAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATGCTCC > NC_000913/3210907‑3211086
|
gAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTaaa < 2:5466686/93‑1 (MQ=255)
gAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTaaa > 1:694138/1‑93 (MQ=255)
aaGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTaaaa < 2:3612294/93‑1 (MQ=255)
aGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAAt > 2:775033/1‑93 (MQ=255)
aGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAAt > 1:362091/1‑93 (MQ=255)
aGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAAt > 2:1363955/1‑93 (MQ=255)
aGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAAt > 1:1887548/1‑93 (MQ=255)
aGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAAt > 1:2135116/1‑93 (MQ=255)
gATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATg < 1:1223183/93‑1 (MQ=255)
aTGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATgg < 1:607021/93‑1 (MQ=255)
aTGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATgg < 1:5036677/93‑1 (MQ=255)
aTGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATgg < 2:4408871/93‑1 (MQ=255)
tgctgcCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATggg < 1:3987067/93‑1 (MQ=255)
gctgcCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGc < 1:1514302/93‑1 (MQ=255)
tgcCGAGGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCAc < 2:2113776/93‑1 (MQ=255)
tgcCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCAc > 1:536493/1‑93 (MQ=255)
tgcCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCAc < 1:2302751/93‑1 (MQ=255)
tgcCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCAc > 2:1612219/1‑93 (MQ=255)
tgcCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCAc < 2:16873/93‑1 (MQ=255)
gcCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCAcc < 1:5616887/93‑1 (MQ=255)
gcCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCAcc < 1:4833419/93‑1 (MQ=255)
gcCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCAcc < 1:1430615/93‑1 (MQ=255)
gcCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCAcc < 1:4428165/93‑1 (MQ=255)
gAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGtt > 1:300070/1‑93 (MQ=255)
aaGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTg > 1:816854/1‑93 (MQ=255)
aaGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTg > 2:5848267/1‑93 (MQ=255)
gccgccGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGaa < 2:2757114/93‑1 (MQ=255)
ccgccgCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAAc < 2:6227294/93‑1 (MQ=255)
ccgccgCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAAc < 2:520103/93‑1 (MQ=255)
gccgcGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTg > 1:3683090/1‑93 (MQ=255)
cgcgCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGtt < 1:415119/93‑1 (MQ=255)
cgcgCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGtt > 2:4841238/1‑93 (MQ=255)
cgcAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGa < 2:4593128/93‑1 (MQ=255)
gcAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGAc > 2:6129865/1‑93 (MQ=255)
gcAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGAc > 2:2300655/1‑93 (MQ=255)
aGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGAccc > 1:3028218/1‑93 (MQ=255)
aGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGAccc < 1:5240127/93‑1 (MQ=255)
ggTGCTTTCCAGCGTGGAATCTGAAATCGGGCGGACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCcg > 2:4323847/1‑93 (MQ=255)
ggTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCcg < 2:3070207/93‑1 (MQ=255)
gTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCcgc > 2:3834076/1‑93 (MQ=255)
tGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCcgcg > 1:6401826/1‑93 (MQ=255)
tGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCcgcg > 1:6015272/1‑93 (MQ=255)
cTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGaa > 2:2436258/1‑93 (MQ=255)
tttCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAg < 2:1111603/93‑1 (MQ=255)
tttCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCCCGAAg > 1:4995112/1‑93 (MQ=255)
tCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGc < 2:1522476/93‑1 (MQ=255)
cAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGa > 1:5897144/1‑93 (MQ=255)
aGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGaa > 2:5754709/1‑93 (MQ=255)
cGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAAt < 2:2681351/93‑1 (MQ=255)
gTGGAATCTGACATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGATCTGTTGACCCGCGAAGGCCAAAtt < 2:5519896/93‑1 (MQ=255)
gTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAAtt > 1:1140725/1‑93 (MQ=255)
gTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAAtt < 1:2945716/93‑1 (MQ=255)
tGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTg > 1:6351011/1‑93 (MQ=255)
tGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTg > 1:343705/1‑93 (MQ=255)
ggAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGa < 1:5845176/93‑1 (MQ=255)
gAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGAc > 2:2941914/1‑93 (MQ=255)
tCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATc < 1:2599739/93‑1 (MQ=255)
cTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCg > 2:2070125/1‑93 (MQ=255)
tGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGc < 2:1467968/93‑1 (MQ=255)
gAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCt > 1:2139198/1‑93 (MQ=255)
aaTCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTaa > 2:4082398/1‑93 (MQ=255)
aaTCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTaa < 2:3260781/93‑1 (MQ=255)
aTCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAg < 2:1174299/93‑1 (MQ=255)
tCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGc > 1:1748449/1‑93 (MQ=255)
gggCGCACGACTGACCCGGTACGCATGTACATGCATAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGt < 1:1471689/93‑1 (MQ=255)
ggCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTa < 2:2730227/93‑1 (MQ=255)
cgcACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTAtt < 1:233961/93‑1 (MQ=255)
cgcACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTAtt > 1:3371341/1‑93 (MQ=255)
aCGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGaa < 1:4504656/93‑1 (MQ=255)
cGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAg < 2:423688/93‑1 (MQ=255)
aCTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGAc > 1:1718932/1‑93 (MQ=255)
aCTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGAc < 1:4710820/93‑1 (MQ=255)
tGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACgg < 2:6024887/93‑1 (MQ=255)
gACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACggg < 1:514253/93‑1 (MQ=255)
gACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACggg < 2:486142/93‑1 (MQ=255)
aCCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGa > 1:2837886/1‑93 (MQ=255)
aCCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGa < 2:4671997/93‑1 (MQ=255)
cccGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGAt > 2:4400093/1‑93 (MQ=255)
cccGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGAt > 2:745326/1‑93 (MQ=255)
ccGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATc > 2:631560/1‑93 (MQ=255)
ccGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATc > 1:3507194/1‑93 (MQ=255)
ccGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATc < 2:5128700/93‑1 (MQ=255)
ccGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTAAAGACGGGATc > 2:177064/1‑93 (MQ=255)
cGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCa > 2:2492130/1‑93 (MQ=255)
cGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCa < 1:4528281/93‑1 (MQ=255)
tACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAAcc < 1:2150478/93‑1 (MQ=255)
gCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAgg < 2:4163868/93‑1 (MQ=255)
cATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGt < 1:1062208/93‑1 (MQ=255)
cATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGt < 2:5221119/93‑1 (MQ=255)
aTGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGtt > 1:5416451/1‑93 (MQ=255)
aTGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGtt > 2:4496932/1‑93 (MQ=255)
tGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTc < 2:1887548/93‑1 (MQ=255)
tGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTc > 2:3714920/1‑93 (MQ=255)
cATGCGTAAAATGGGCACCGTTGAACTGTTTACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATg < 2:3196150/93‑1 (MQ=255)
cATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATg < 1:2800583/93‑1 (MQ=255)
cATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATg > 1:3803884/1‑93 (MQ=255)
aTGCGGAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATGc < 2:5325026/93‑1 (MQ=255)
tGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATGCt > 1:6355347/1‑93 (MQ=255)
gCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATGCTc < 2:5708781/93‑1 (MQ=255)
gCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATGCTc < 1:2432291/93‑1 (MQ=255)
|
GAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATGCTCC > NC_000913/3210907‑3211086
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATGCTCCGTTG > NC_000913/3210904‑3211090
|
GACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTA < SRR4302537.5954176/94‑1 (MQ=60)
GACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTA > SRR4302537.4680079/1‑94 (MQ=60)
ACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAA < SRR4302537.39557/94‑1 (MQ=60)
CGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAA > SRR4302537.698896/1‑94 (MQ=60)
GAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAA < SRR4302537.2092732/94‑1 (MQ=60)
GAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAA > SRR4302537.4526494/1‑94 (MQ=60)
AAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCCCGACTGACCCGGTACGCATGTACATGCGTAAAAT > SRR4302537.516924/1‑94 (MQ=60)
AAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAAT > SRR4302537.364609/1‑94 (MQ=60)
AAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAAT > SRR4302537.2150146/1‑94 (MQ=60)
AAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAAT > SRR4302537.1900673/1‑94 (MQ=60)
AAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAAT < SRR4302537.2152331/94‑1 (MQ=60)
GATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGG < SRR4302537.1231686/94‑1 (MQ=60)
ATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGG < SRR4302537.5071350/94‑1 (MQ=60)
ATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGG > SRR4302537.6059927/1‑94 (MQ=60)
ATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGG < SRR4302537.611170/94‑1 (MQ=60)
TGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGC < SRR4302537.2297074/94‑1 (MQ=60)
TGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGC < SRR4302537.4014988/94‑1 (MQ=60)
TGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGC < SRR4302537.1186291/94‑1 (MQ=60)
GCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCA < SRR4302537.1524883/94‑1 (MQ=60)
CTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCAC > SRR4302537.4536930/1‑94 (MQ=60)
CTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCAC > SRR4302537.540174/1‑94 (MQ=60)
TGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACC < SRR4302537.2319005/94‑1 (MQ=60)
TGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACC < SRR4302537.5216823/94‑1 (MQ=60)
GCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCG < SRR4302537.4458747/94‑1 (MQ=60)
GCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCG < SRR4302537.1440575/94‑1 (MQ=60)
GCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCG < SRR4302537.5655293/94‑1 (MQ=60)
GCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCG < SRR4302537.4866794/94‑1 (MQ=60)
CCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGT > SRR4302537.3035986/1‑94 (MQ=60)
CGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTT > SRR4302537.302163/1‑94 (MQ=60)
CGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTT > SRR4302537.1490558/1‑94 (MQ=60)
GAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTG > SRR4302537.5070622/1‑94 (MQ=60)
GAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTG > SRR4302537.822467/1‑94 (MQ=60)
AAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGA < SRR4302537.6397021/94‑1 (MQ=60)
GCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAAC > SRR4302537.2521273/1‑94 (MQ=60)
CGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTG > SRR4302537.5312100/1‑94 (MQ=60)
CGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTG > SRR4302537.3708991/1‑94 (MQ=60)
GCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGT < SRR4302537.3231530/94‑1 (MQ=60)
GCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGT < SRR4302537.1954511/94‑1 (MQ=60)
CGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTG > SRR4302537.3524580/1‑94 (MQ=60)
CGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTG < SRR4302537.417996/94‑1 (MQ=60)
GCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGA < SRR4302537.2897292/94‑1 (MQ=60)
CGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGAC > SRR4302537.1127570/1‑94 (MQ=60)
CAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCC > SRR4302537.5983936/1‑94 (MQ=60)
CAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCC > SRR4302537.3049332/1‑94 (MQ=60)
AGGTGCTTTCCAGCGTGGAGTCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCG > SRR4302537.5501265/1‑94 (MQ=60)
AGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCG > SRR4302537.1267711/1‑94 (MQ=60)
AGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCG < SRR4302537.5276186/94‑1 (MQ=60)
GTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCG > SRR4302537.6445405/1‑94 (MQ=60)
GTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCG > SRR4302537.6056602/1‑94 (MQ=60)
TGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGA > SRR4302537.4900940/1‑94 (MQ=60)
TGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGA > SRR4302537.3814944/1‑94 (MQ=60)
CTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAG < SRR4302537.4765907/94‑1 (MQ=60)
CTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAG > SRR4302537.174373/1‑94 (MQ=60)
CTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCCCGAAG > SRR4302537.5029534/1‑94 (MQ=60)
CTTTACAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAG < SRR4302537.4525350/94‑1 (MQ=60)
TTCCAGCGTGGAATCTTAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGGCCCGCGAAGGC < SRR4302537.33164/94‑1 (MQ=60)
TCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCG < SRR4302537.5103714/94‑1 (MQ=60)
CCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGA > SRR4302537.5937609/1‑94 (MQ=60)
AGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAA > SRR4302537.5936426/1‑94 (MQ=60)
CGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATT > SRR4302537.1148649/1‑94 (MQ=60)
GTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTG < SRR4302537.6219131/94‑1 (MQ=60)
GTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTG > SRR4302537.346093/1‑94 (MQ=60)
GTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTG > SRR4302537.6394374/1‑94 (MQ=60)
GTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTG > SRR4302537.5887630/1‑94 (MQ=60)
GTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTG < SRR4302537.4040439/94‑1 (MQ=60)
GTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTG < SRR4302537.2966393/94‑1 (MQ=60)
GTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTG < SRR4302537.2966392/94‑1 (MQ=60)
GTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTG < SRR4302537.2530612/94‑1 (MQ=60)
TGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGA > SRR4302537.3585207/1‑94 (MQ=60)
GGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGAC < SRR4302537.5885257/94‑1 (MQ=60)
AATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACAT < SRR4302537.3438692/94‑1 (MQ=60)
AATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACAT < SRR4302537.5710740/94‑1 (MQ=60)
ATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATC > SRR4302537.1825769/1‑94 (MQ=60)
TCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCG < SRR4302537.5429684/94‑1 (MQ=60)
TCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCG < SRR4302537.6401906/94‑1 (MQ=60)
TCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCG < SRR4302537.2617919/94‑1 (MQ=60)
TGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCT > SRR4302537.2154257/1‑94 (MQ=60)
AAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGCCATCGCTAA > SRR4302537.3588671/1‑94 (MQ=60)
AAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAA > SRR4302537.1559361/1‑94 (MQ=60)
AATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACggaatagat > SRR4302537.2886261/1‑85 (MQ=60)
ATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGC < SRR4302537.854182/94‑1 (MQ=60)
ATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGC > SRR4302537.1760644/1‑94 (MQ=60)
ATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGC < SRR4302537.3674838/94‑1 (MQ=60)
TCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCG < SRR4302537.2718200/94‑1 (MQ=60)
CGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGT > SRR4302537.3924617/1‑94 (MQ=60)
GGGCGCACGACTGACCCGGTACGGATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACACGCGAAGGCGAAATTGACATCGCTAAGCGTA > SRR4302537.2842564/1‑94 (MQ=60)
GGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTA > SRR4302537.4834284/1‑94 (MQ=60)
GGGCGCACGACTGACCCGGTACGCATGTACATGCATAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTA < SRR4302537.1481920/94‑1 (MQ=60)
GCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATT > SRR4302537.3395231/1‑94 (MQ=60)
GCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATT < SRR4302537.1383223/94‑1 (MQ=60)
CGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTG < SRR4302537.235615/94‑1 (MQ=60)
CGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTG < SRR4302537.2410142/94‑1 (MQ=60)
CACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAA > SRR4302537.696512/1‑94 (MQ=60)
ACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAG < SRR4302537.774263/94‑1 (MQ=60)
ACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAG < SRR4302537.4535807/94‑1 (MQ=60)
GACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGAC > SRR4302537.1730945/1‑94 (MQ=60)
ACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACG < SRR4302537.6389379/94‑1 (MQ=60)
ACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACG < SRR4302537.4743411/94‑1 (MQ=60)
CTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGG > SRR4302537.5410048/1‑94 (MQ=60)
TGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGG < SRR4302537.2214196/94‑1 (MQ=60)
TGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGG > SRR4302537.4568731/1‑94 (MQ=60)
GACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGA > SRR4302537.2857742/1‑94 (MQ=60)
GACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGA < SRR4302537.517787/94‑1 (MQ=60)
ACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGAT < SRR4302537.2159963/94‑1 (MQ=60)
CCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATC > SRR4302537.941804/1‑94 (MQ=60)
CCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATC > SRR4302537.3532007/1‑94 (MQ=60)
CCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCA < SRR4302537.2347002/94‑1 (MQ=60)
CGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAA < SRR4302537.4559635/94‑1 (MQ=60)
TACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCA < SRR4302537.2165637/94‑1 (MQ=60)
CGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGG > SRR4302537.1447985/1‑94 (MQ=60)
GCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGT > SRR4302537.3939189/1‑94 (MQ=60)
CATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTT > SRR4302537.5453378/1‑94 (MQ=60)
CATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTT < SRR4302537.1069531/94‑1 (MQ=60)
CATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTT < SRR4302537.1713040/94‑1 (MQ=60)
CATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTT < SRR4302537.6473949/94‑1 (MQ=60)
ATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTC > SRR4302537.4449260/1‑94 (MQ=60)
TACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAAT < SRR4302537.3298390/94‑1 (MQ=60)
ACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATG > SRR4302537.3830564/1‑94 (MQ=60)
CATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATGC < SRR4302537.2820158/94‑1 (MQ=60)
ATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATGCT > SRR4302537.6398728/1‑94 (MQ=60)
GCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATGCTCC < SRR4302537.2449427/94‑1 (MQ=60)
CGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATGCTCCG > SRR4302537.758809/1‑94 (MQ=60)
TAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATGCTCCGTT < SRR4302537.5228797/94‑1 (MQ=60)
AAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATGCTCCGTTG < SRR4302537.4166241/94‑1 (MQ=60)
AAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATGCTCCGTTG < SRR4302537.1126861/94‑1 (MQ=60)
|
GACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATGCTCCGTTG > NC_000913/3210904‑3211090
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
