Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I2 R1	882	254.4	12957588	98.0%	12698436	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,957,560	+C	intergenic (‑129/‑732)	ppiC ← / → rep	peptidyl‑prolyl cis‑trans isomerase C/rep helicase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,957,558	1	.	C	100.0%	838.7 / NA	238	intergenic (‑127/‑734)	ppiC/rep	peptidyl‑prolyl cis‑trans isomerase C/rep helicase
Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (99/139); total (99/139)

Only 100 of 253 total aligned reads displayed.

GCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑T‑G‑C‑TCGCAGG‑T‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATG  >  NC_000913/3957472‑3957645

gCATGATCTGCAGATGATAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCGGGAAAATCCGG‑G‑CTTCGCAGG‑T‑ccct                                                                                     <  2:1172502/93‑3 (MQ=255)

  aTGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑T‑ccctca                                                                                   >  1:3771332/1‑89 (MQ=255)

  aTGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑T‑ccctca                                                                                   >  2:5585913/1‑89 (MQ=255)

  aTGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑T‑ccctca                                                                                   >  1:2460872/1‑89 (MQ=255)

  aTGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑T‑ccctca                                                                                   >  2:4151215/1‑89 (MQ=255)

     aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAgg                                                                                 >  2:2738027/1‑93 (MQ=255)

      tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAggg                                                                                <  2:2329307/93‑1 (MQ=255)

       ccGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAgggg                                                                               <  2:2797845/93‑1 (MQ=255)

        cGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGga                                                                              <  1:3215036/93‑1 (MQ=255)

        cGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGga                                                                              <  2:3864458/93‑1 (MQ=255)

         gCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGgag                                                                             <  2:3111760/93‑1 (MQ=255)

           aGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGaa                                                                           >  1:112220/1‑93 (MQ=255)

             aTGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGaaaa                                                                         <  2:3196161/93‑1 (MQ=255)

              tGCTAGCGTAATGGTAGGTCGGGGAGGGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAAc                                                                        <  2:3460097/93‑1 (MQ=255)

              tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGaaaat                                                                        >  1:3280685/1‑92 (MQ=255)

              tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAAc                                                                        >  1:5877130/1‑93 (MQ=255)

               gCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATTTTTGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACt                                                                       >  1:3492403/1‑93 (MQ=255)

               gCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACt                                                                       <  2:2226671/93‑1 (MQ=255)

                 tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTa                                                                     <  1:1988196/93‑1 (MQ=255)

                 tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTa                                                                     <  1:3981075/93‑1 (MQ=255)

                 tAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTa                                                                     >  1:4863583/1‑93 (MQ=255)

                 tAACGTAATTGTCAGTCAGGAAGTGTCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTa                                                                     <  2:160365/93‑1 (MQ=255)

                  aaCGTAATTGTCAGTCAGGGATTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAg                                                                    <  2:1297986/93‑1 (MQ=255)

                  aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAg                                                                    <  2:5765088/93‑1 (MQ=255)

                  aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAg                                                                    <  2:956673/93‑1 (MQ=255)

                  aaCGTAATGGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAg                                                                    <  2:3937327/93‑1 (MQ=255)

                   aCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAgg                                                                   >  2:681677/1‑93 (MQ=255)

                   aCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGAAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAgg                                                                   <  2:1453849/93‑1 (MQ=255)

                    cGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAggg                                                                  >  1:4519894/1‑93 (MQ=255)

                     gTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGc                                                                 >  1:4371989/1‑93 (MQ=255)

                      tAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGcc                                                                <  2:4086477/93‑1 (MQ=255)

                      tAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGcc                                                                <  2:4953663/93‑1 (MQ=255)

                       aaTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCct                                                               <  1:2944315/93‑1 (MQ=255)

                        aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCctc                                                              >  2:3006566/1‑93 (MQ=255)

                        aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCctc                                                              >  1:6051815/1‑93 (MQ=255)

                        aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCctc                                                              >  2:177276/1‑93 (MQ=255)

                           gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGC‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTAt                                                           <  1:3467491/93‑1 (MQ=255)

                           gtcagtcaGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTAt                                                           >  2:2188810/1‑93 (MQ=255)

                            tcagtcagGGAGTGTCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg                                                          <  2:3792624/93‑1 (MQ=255)

                            tcagtcagGGAGTGGCTGGTACATATATGGCCAAAGCCCGGAAAATCCGG‑G‑CTTAGCAGGCC‑CCTCAAGGGGAGAAAACTTAGGGCCCCTATg                                                          >  1:5168093/1‑93 (MQ=255)

                            tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg                                                          <  1:5920247/93‑1 (MQ=255)

                                 cagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTa                                                     >  1:192349/1‑93 (MQ=255)

                                 cagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTa                                                     <  1:1749095/93‑1 (MQ=255)

                                 cagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTa                                                     <  2:796362/93‑1 (MQ=255)

                                  agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc                                                    >  1:2921155/1‑93 (MQ=255)

                                  agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc                                                    >  2:2278909/1‑93 (MQ=255)

                                  agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc                                                    >  2:4725614/1‑93 (MQ=255)

                                  agGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGGAAACTTAGGGCCTCTATGGGCTaa                                                    >  2:4749082/1‑92 (MQ=255)

                                   gggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa                                                   <  1:5499640/93‑1 (MQ=255)

                                     gAGTGGCTGTTACATATATGGCAAAAGCCCGGAAAGTCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa                                                 <  1:1479384/93‑1 (MQ=255)

                                        tGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTc                                              >  1:4523827/1‑93 (MQ=255)

                                           cTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt                                           >  2:3946913/1‑93 (MQ=255)

                                           cTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt                                           <  2:5065271/93‑1 (MQ=255)

                                           cTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt                                           <  1:2290757/93‑1 (MQ=255)

                                            tGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa                                          <  1:5283170/93‑1 (MQ=255)

                                            tGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa                                          >  2:3046603/1‑93 (MQ=255)

                                            tGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa                                          >  2:873470/1‑93 (MQ=255)

                                            tGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa                                          <  1:2028786/93‑1 (MQ=255)

                                             gttACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt                                         <  1:2314512/91‑1 (MQ=255)

                                             ggTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt                                         <  1:603385/93‑1 (MQ=255)

                                             ggTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt                                         >  2:2643519/1‑93 (MQ=255)

                                             ggTACATATATGGCAAAAGCCCGGAAAATCC‑GGG‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt                                         >  1:1289646/1‑93 (MQ=255)

                                             ggTACATATATGGCAAAAGCCCGGAAAATCC‑GGG‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt                                         >  1:1829892/1‑93 (MQ=255)

                                              gTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc                                        <  2:2492102/93‑1 (MQ=255)

                                              gTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc                                        <  1:336380/93‑1 (MQ=255)

                                              gTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc                                        <  2:452705/93‑1 (MQ=255)

                                               tACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCg                                       <  1:6394854/93‑1 (MQ=255)

                                               tACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCg                                       <  1:1736859/93‑1 (MQ=255)

                                                aCATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg                                      <  1:3588988/93‑1 (MQ=255)

                                                aCATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg                                      >  1:2634512/1‑93 (MQ=255)

                                                 cATATATGGCAAAAGCCGGGAAAATCC‑G‑GTCTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg                                     <  1:4597768/93‑1 (MQ=255)

                                                 cATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg                                     >  2:4424426/1‑93 (MQ=255)

                                                   tatatGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa                                   >  2:5639456/1‑93 (MQ=255)

                                                    atatGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAt                                  >  2:5336809/1‑93 (MQ=255)

                                                    atatGCCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAt                                  >  2:518344/1‑93 (MQ=255)

                                                    atagGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAt                                  <  1:5436890/93‑1 (MQ=255)

                                                     tatGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg                                 >  1:1795823/1‑93 (MQ=255)

                                                     tatGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg                                 >  1:4746987/1‑93 (MQ=255)

                                                     tatGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg                                 <  1:775156/93‑1 (MQ=255)

                                                     tatGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg                                 >  1:2723435/1‑93 (MQ=255)

                                                      atGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATgg                                <  1:3013139/93‑1 (MQ=255)

                                                       tGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt                               <  2:4825143/93‑1 (MQ=255)

                                                       tGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt                               >  2:1419565/1‑93 (MQ=255)

                                                          cAAAATCCCGGAAAATCC‑G‑GTCTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttat                            <  1:6219775/93‑1 (MQ=255)

                                                          cAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttat                            >  2:6389810/1‑93 (MQ=255)

                                                            aaaGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattt                          >  2:1103498/1‑93 (MQ=255)

                                                            aaaGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattt                          <  1:3197903/93‑1 (MQ=255)

                                                             aaGCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttt                         <  2:5526186/93‑1 (MQ=255)

                                                               gCCCGGAAAATCCGG‑G‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat                       >  2:5441257/1‑93 (MQ=255)

                                                                cccGGAAAATCC‑GGG‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt                      >  2:3589994/1‑93 (MQ=255)

                                                                               ggcttCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAg         >  2:4219993/5‑93 (MQ=255)

                                                                               ggcttCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAg         <  2:3735335/89‑1 (MQ=255)

                                                                                gcttCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTATCAATTTATGAGc        <  2:4571938/90‑1 (MQ=255)

                                                                                  ttCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGa      >  2:4838589/2‑93 (MQ=255)

                                                                                  ttCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGa      >  1:1429154/2‑93 (MQ=255)

                                                                                    cGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGata    <  2:6225606/93‑1 (MQ=255)

                                                                                    cGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGata    <  1:2085482/93‑1 (MQ=255)

                                                                                     gCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGatat   <  2:6121302/93‑1 (MQ=255)

                                                                                     gCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGatat   <  1:3036910/93‑1 (MQ=255)

                                                                                      cAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATg  >  1:904553/1‑93 (MQ=255)

GCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑T‑G‑C‑TCGCAGG‑T‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATG  >  NC_000913/3957472‑3957645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑TG‑‑C‑‑‑TCGCAGG‑T‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATTGA  >  NC_000913/3957480‑3957652

CGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAG                                                                                    >  SRR4302537.5238879/1‑94 (MQ=60)

CGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAG                                                                                    <  SRR4302537.3237663/94‑1 (MQ=60)

  CAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAA                                                                                  >  SRR4302537.113041/1‑94 (MQ=60)

  CAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAA                                                                                  <  SRR4302537.4530409/94‑1 (MQ=60)

   AGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAA                                                                                 >  SRR4302537.1562/1‑94 (MQ=60)

   AGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAA                                                                                 >  SRR4302537.3596700/1‑94 (MQ=60)

     ATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAAT                                                                               >  SRR4302537.3303848/1‑94 (MQ=60)

     ATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAAC                                                                               >  SRR4302537.5917454/1‑94 (MQ=60)

     ATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAAC                                                                               <  SRR4302537.5336240/94‑1 (MQ=60)

     ATGCTAACGTAATTGTCAGTCAGGGAATGGCTGGTAAATATATGGCAAAAACCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAAC                                                                               <  SRR4302537.6517435/94‑1 (MQ=57)

      TGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATTTTTGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACT                                                                              >  SRR4302537.3517105/1‑94 (MQ=60)

        CTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTA                                                                            >  SRR4302537.3249558/1‑94 (MQ=60)

        CTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTA                                                                            >  SRR4302537.1175294/1‑94 (MQ=60)

        CTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTA                                                                            >  SRR4302537.4897137/1‑94 (MQ=60)

         TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAG                                                                           <  SRR4302537.3261838/94‑1 (MQ=60)

         TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAG                                                                           <  SRR4302537.4008946/94‑1 (MQ=60)

         TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAG                                                                           <  SRR4302537.3220719/94‑1 (MQ=60)

         TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAG                                                                           <  SRR4302537.2002019/94‑1 (MQ=60)

          AACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGG                                                                          <  SRR4302537.3090552/94‑1 (MQ=60)

           ACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGG                                                                         <  SRR4302537.1451172/94‑1 (MQ=60)

           ACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGG                                                                         >  SRR4302537.4551158/1‑94 (MQ=60)

            CGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGC                                                                        >  SRR4302537.4402195/1‑94 (MQ=60)

            CGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGC                                                                        <  SRR4302537.4433622/94‑1 (MQ=60)

            CGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGC                                                                        >  SRR4302537.4908945/1‑94 (MQ=60)

             GTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCC                                                                       >  SRR4302537.1827304/1‑94 (MQ=60)

              TAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCT                                                                      <  SRR4302537.2052406/94‑1 (MQ=60)

               AATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTC                                                                     <  SRR4302537.2964981/94‑1 (MQ=60)

               AATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTC                                                                     >  SRR4302537.6093385/1‑94 (MQ=60)

               AATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTC                                                                     >  SRR4302537.4698762/1‑94 (MQ=60)

                 TTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTA                                                                   >  SRR4302537.2454596/1‑94 (MQ=60)

                   GTCAGTCAGGGAGTGGCTGGTACATATATGGCCAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TAGCAGGCC‑CCTCAAGGGGAGAAAACTTAGGGCCCCTATG                                                                 >  SRR4302537.5203691/1‑94 (MQ=46)

                   GTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑‑G‑‑CGCTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATG                                                                 <  SRR4302537.3492016/94‑1 (MQ=60)

                    TCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGG                                                                <  SRR4302537.5960870/94‑1 (MQ=60)

                     CAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGGCCGGCAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGC                                                               >  SRR4302537.2150217/1‑94 (MQ=60)

                     CAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGG                                                               >  SRR4302537.4692431/1‑94 (MQ=60)

                       GTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCT                                                             <  SRR4302537.345530/94‑1 (MQ=60)

                        gcgGGGAGTGGCTGGTACATATAGGGCAAAGGCCCGTAAAATCC‑‑GGGTT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTA                                                            <  SRR4302537.3336153/91‑1 (MQ=52)

                        TCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTA                                                            >  SRR4302537.193714/1‑94 (MQ=60)

                         CAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAC                                                           <  SRR4302537.1761293/94‑1 (MQ=60)

                         CAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAC                                                           >  SRR4302537.2690146/1‑94 (MQ=60)

                         CAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAC                                                           >  SRR4302537.2941681/1‑94 (MQ=60)

                          AGGGAGTGGGTGGTTCATATATGGCAAAAGCGCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACA                                                          <  SRR4302537.3054670/94‑1 (MQ=57)

                           GGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAA                                                         <  SRR4302537.3707281/94‑1 (MQ=60)

                           GGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAA                                                         <  SRR4302537.5537196/94‑1 (MQ=60)

                             GAGTGGCTGTTACATATATGGCAAAAGCCCGGAAAGTCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAG                                                       <  SRR4302537.1489672/94‑1 (MQ=60)

                             GAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAG                                                       <  SRR4302537.4987903/94‑1 (MQ=60)

                              AGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGT                                                      <  SRR4302537.4567577/94‑1 (MQ=60)

                               GTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTC                                                     >  SRR4302537.4555124/1‑94 (MQ=60)

                                TGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCA                                                    <  SRR4302537.2015417/94‑1 (MQ=60)

                                  GCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATT                                                  <  SRR4302537.6081853/94‑1 (MQ=60)

                                   CTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTA                                                 >  SRR4302537.6199208/1‑94 (MQ=60)

                                   CTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTA                                                 <  SRR4302537.2306933/94‑1 (MQ=60)

                                    TGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT                                                <  SRR4302537.6444247/94‑1 (MQ=60)

                                    TGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT                                                >  SRR4302537.1298616/1‑94 (MQ=60)

                                    TGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT                                                >  SRR4302537.1878587/1‑94 (MQ=60)

                                    TGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT                                                <  SRR4302537.2042930/94‑1 (MQ=60)

                                    TGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT                                                >  SRR4302537.1842640/1‑94 (MQ=60)

                                    TGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT                                                <  SRR4302537.5319504/94‑1 (MQ=60)

                                     GTTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC                                               <  SRR4302537.2330848/94‑1 (MQ=60)

                                     GGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC                                               <  SRR4302537.607512/94‑1 (MQ=60)

                                     GGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC                                               <  SRR4302537.3412208/94‑1 (MQ=60)

                                     GGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC                                               <  SRR4302537.3020090/94‑1 (MQ=60)

                                      GTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCG                                              <  SRR4302537.338708/94‑1 (MQ=60)

                                       TACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGG                                             <  SRR4302537.1748972/94‑1 (MQ=60)

                                       TACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGG                                             >  SRR4302537.232804/1‑94 (MQ=60)

                                       TACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGG                                             <  SRR4302537.6438406/94‑1 (MQ=60)

                                       TACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGG                                             >  SRR4302537.2652947/1‑94 (MQ=60)

                                        ACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGG                                            >  SRR4302537.143213/1‑94 (MQ=60)

                                        ACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGG                                            <  SRR4302537.3614286/94‑1 (MQ=60)

                                         CATATATGGCAAAAGCCGGGAAAATCCGGTC‑‑T‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGG                                           <  SRR4302537.4629587/94‑1 (MQ=60)

                                         CATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGG                                           <  SRR4302537.5960748/94‑1 (MQ=60)

                                         CATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGG                                           <  SRR4302537.2776551/94‑1 (MQ=60)

                                         CATATATGGCAAAAGCCCGAAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGG                                           <  SRR4302537.456248/94‑1 (MQ=60)

                                          ATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGA                                          >  SRR4302537.2346924/1‑94 (MQ=60)

                                           TATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAT                                         >  SRR4302537.1353117/1‑94 (MQ=60)

                                            ATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATG                                        >  SRR4302537.1808355/1‑94 (MQ=60)

                                            ATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATG                                        >  SRR4302537.4779783/1‑94 (MQ=60)

                                            ATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATG                                        >  SRR4302537.2742456/1‑94 (MQ=60)

                                            ATAGGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATG                                        <  SRR4302537.5473977/94‑1 (MQ=60)

                                             TATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGG                                       <  SRR4302537.780468/94‑1 (MQ=60)

                                             TATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGG                                       <  SRR4302537.790585/94‑1 (MQ=60)

                                              ATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGT                                      >  SRR4302537.3498662/1‑94 (MQ=60)

                                              ATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGT                                      <  SRR4302537.3034147/94‑1 (MQ=60)

                                               TGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTT                                     <  SRR4302537.6133306/94‑1 (MQ=60)

                                                 GCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTAT                                   >  SRR4302537.2775711/1‑94 (MQ=60)

                                                 GCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTAT                                   <  SRR4302537.3877197/94‑1 (MQ=60)

                                                  CAAAATCCCGGAAAATCCGGTC‑‑T‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATT                                  <  SRR4302537.6262597/94‑1 (MQ=60)

                                                  CAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATT                                  <  SRR4302537.5754362/94‑1 (MQ=60)

                                                   AAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTT                                 >  SRR4302537.1764097/1‑94 (MQ=60)

                                                    AAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTT                                <  SRR4302537.3220393/94‑1 (MQ=60)

                                                    AAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTT                                >  SRR4302537.455129/1‑94 (MQ=60)

                                                    AAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTT                                <  SRR4302537.2619797/94‑1 (MQ=60)

                                                      AGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTAT                              <  SRR4302537.2951207/94‑1 (MQ=60)

                                                       GCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATT                             >  SRR4302537.273082/1‑94 (MQ=60)

                                                       GCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATT                             <  SRR4302537.203123/94‑1 (MQ=60)

                                                        CCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTG                            <  SRR4302537.4089779/94‑1 (MQ=60)

                                                        CCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTG                            >  SRR4302537.3540222/1‑94 (MQ=60)

                                                         CCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT                           >  SRR4302537.6087420/1‑94 (MQ=60)

                                                         CCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT                           >  SRR4302537.2794173/1‑94 (MQ=60)

                                                               ccaaaaatccgggctTCGCAGG‑TCCCTCAAGCGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTC                          <  SRR4302537.5518948/79‑1 (MQ=60)

                                                                ggaaaatccgggctTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCA                         <  SRR4302537.1685268/80‑1 (MQ=60)

                                                                ggaaaatccgggctTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCA                         >  SRR4302537.2051258/15‑94 (MQ=60)

                                                                 gaaaatccgggctTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAA                        >  SRR4302537.2223692/14‑94 (MQ=60)

                                                                  aaaatccgggctTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAAT                       <  SRR4302537.4838538/82‑1 (MQ=60)

                                                                  aaaatccgggctTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAAT                       >  SRR4302537.2565646/13‑94 (MQ=60)

                                                                    aatccgggctTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTT                     <  SRR4302537.5991639/84‑1 (MQ=60)

                                                                    aatccgggctTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTT                     >  SRR4302537.5240335/11‑94 (MQ=60)

                                                                    aatccgggctTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTT                     <  SRR4302537.5958774/84‑1 (MQ=60)

                                                                    aatccgggctTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTT                     >  SRR4302537.5609473/11‑94 (MQ=60)

                                                                     atccgggctTCGCAGG‑TCCCTCAAGGGGAGAAAACTTATGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTA                    <  SRR4302537.5292840/85‑1 (MQ=60)

                                                                     atccgggctTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTA                    >  SRR4302537.996098/10‑94 (MQ=60)

                                                                     atccgggctTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTA                    <  SRR4302537.1877294/85‑1 (MQ=60)

                                                                     atccggactTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTA                    >  SRR4302537.692941/10‑94 (MQ=60)

                                                                      tccgggctTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTAT                   <  SRR4302537.4863571/86‑1 (MQ=60)

                                                                       ccgggctTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATG                  <  SRR4302537.4372633/87‑1 (MQ=60)

                                                                         gggctTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAG                <  SRR4302537.2356064/89‑1 (MQ=60)

                                                                          ggctTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGC               >  SRR4302537.573635/5‑94 (MQ=60)

                                                                          T‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGAT            <  SRR4302537.5513446/94‑1 (MQ=60)

                                                                            ctTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGA             >  SRR4302537.1439103/3‑94 (MQ=60)

                                                                            ctTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGA             >  SRR4302537.5424163/3‑94 (MQ=60)

                                                                            ctTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGA             >  SRR4302537.6335379/3‑94 (MQ=60)

                                                                              TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATA           <  SRR4302537.6032222/94‑1 (MQ=60)

                                                                               CGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGCTGGTTATTTTATTGTCAATTTATGAGCGATAT          >  SRR4302537.3160358/1‑94 (MQ=60)

                                                                               CGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATAT          <  SRR4302537.2100183/94‑1 (MQ=60)

                                                                               CGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATAT          >  SRR4302537.1846085/1‑94 (MQ=60)

                                                                                GCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATG         >  SRR4302537.910797/1‑94 (MQ=60)

                                                                                GCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATG         <  SRR4302537.3839601/94‑1 (MQ=60)

                                                                                GCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATG         <  SRR4302537.3058077/94‑1 (MQ=60)

                                                                                 CAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGG        <  SRR4302537.1754312/94‑1 (MQ=60)

                                                                                 CAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGG        <  SRR4302537.218935/94‑1 (MQ=60)

                                                                                 CAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGG        <  SRR4302537.1949928/94‑1 (MQ=60)

                                                                                 CAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGG        <  SRR4302537.2987569/94‑1 (MQ=60)

                                                                                  AGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGC       >  SRR4302537.5553566/1‑94 (MQ=60)

                                                                                   GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCGCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCA      <  SRR4302537.3340471/94‑1 (MQ=60)

                                                                                     gtcCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCAT     <  SRR4302537.5255760/91‑1 (MQ=60)

                                                                                     gtcCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCAT     <  SRR4302537.755936/91‑1 (MQ=60)

                                                                                      tcCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATT    <  SRR4302537.541883/92‑1 (MQ=60)

                                                                                      tcCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATT    <  SRR4302537.1105583/92‑1 (MQ=60)

                                                                                      tcCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATT    <  SRR4302537.2307530/92‑1 (MQ=60)

                                                                                      tcCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATT    >  SRR4302537.5817776/3‑94 (MQ=60)

                                                                                      C‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATTG   <  SRR4302537.3027501/94‑1 (MQ=60)

                                                                                      C‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATTG   <  SRR4302537.2846750/94‑1 (MQ=60)

                                                                                        CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATTGA  <  SRR4302537.2483774/94‑1 (MQ=60)

CGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑TG‑‑C‑‑‑TCGCAGG‑T‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATTGA  >  NC_000913/3957480‑3957652

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`