Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,967,226 |
T→C |
L195P (CTG→CCG) |
wzzE → |
putative transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,967,226 | 0 | T | C | 97.0%
| 775.5
/ 8.4
| 236 | L195P (CTG→CCG) | wzzE | putative transport protein |
| Reads supporting (aligned to +/- strand): ref base T (4/3); new base C (118/111); total (122/114) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.78e-01 |
Only 100 of 239 total aligned reads displayed.
TTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGA > NC_000913/3967136‑3967315
|
tGCCGAACCCGCGCCTGACGCTAATACCCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCAACTGAATGATGAGCCGaa < 1:2927527/93‑1 (MQ=255)
tGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGaa < 2:1685484/93‑1 (MQ=255)
gCCGAATCCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGaaa < 2:5602766/93‑1 (MQ=255)
gCCGAAGCCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGaaa < 2:4600377/93‑1 (MQ=255)
gCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGaaa < 1:3725810/93‑1 (MQ=255)
cGAACCCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAgg < 2:3135153/93‑1 (MQ=255)
cGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAgg > 2:3205368/1‑93 (MQ=255)
gAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGgc > 2:5547872/1‑93 (MQ=255)
gAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGgc > 1:2383132/1‑93 (MQ=255)
gAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGgc > 1:3018181/1‑93 (MQ=255)
gAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGgc < 1:2747443/93‑1 (MQ=255)
aaaCCGCGCCTGACGCTAGTAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGgcg > 2:1180943/1‑93 (MQ=255)
aaaCCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGgcg > 2:3566810/1‑93 (MQ=255)
aaaCCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGACGAAAGgcg > 2:3111787/1‑93 (MQ=255)
aaCCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGgcgc > 1:2180571/1‑93 (MQ=255)
aCCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCa < 1:1935874/93‑1 (MQ=255)
cgcgCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATg < 1:6023198/93‑1 (MQ=255)
gcgcCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATgg > 1:2897224/1‑93 (MQ=255)
gcgcCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATgg < 1:3671169/93‑1 (MQ=255)
ccgcCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATgg < 1:333414/92‑1 (MQ=255)
cgcCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATggg > 1:5158123/1‑93 (MQ=255)
cgcCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATggg < 1:1221368/93‑1 (MQ=255)
cgcCTGACGCTAATAACATGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATggg > 2:3862055/1‑93 (MQ=255)
gcCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGggc < 1:4507470/93‑1 (MQ=255)
gcCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGggc > 2:2515839/1‑93 (MQ=255)
cTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGggcgg > 2:2238251/1‑93 (MQ=255)
cTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGggcgg > 2:1384494/1‑93 (MQ=255)
tGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGggcggc > 1:3442126/1‑93 (MQ=255)
tGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGggcggc < 1:2803058/93‑1 (MQ=255)
gtcGCTAATAACCTGTTACGTCAGGATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGGCGAACGGAGCATGGgcggcg > 2:845573/3‑93 (MQ=255)
aCGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGgcgc > 1:1679110/1‑93 (MQ=255)
cGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGcgcg > 1:3655981/1‑93 (MQ=255)
cGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGcgcg > 1:5562855/1‑93 (MQ=255)
gCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGt > 2:261451/1‑93 (MQ=255)
gCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGCGCGGCGCGt > 2:4772906/1‑93 (MQ=255)
cTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTa > 2:3692947/1‑93 (MQ=255)
aataaCCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTAcc > 2:1926777/1‑93 (MQ=255)
taaCCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCAt < 2:4467998/93‑1 (MQ=255)
aaCCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATc < 2:2892192/93‑1 (MQ=255)
aCCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATcc > 1:2008058/1‑93 (MQ=255)
ccTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCa > 2:4359914/1‑93 (MQ=255)
tGTTACATCAGTATGTTGTTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGa < 2:1290957/93‑1 (MQ=255)
tACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGa < 2:3320979/93‑1 (MQ=255)
cGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGaaa < 1:4087377/93‑1 (MQ=255)
cGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGaaa < 2:5285682/93‑1 (MQ=255)
cGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGaaa < 2:3274942/93‑1 (MQ=255)
cGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGaaa < 1:6439857/93‑1 (MQ=255)
gTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAg > 1:2634771/1‑93 (MQ=255)
tCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGc > 1:4446398/1‑93 (MQ=255)
tCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGc < 2:279351/93‑1 (MQ=255)
cAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATTAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCt > 2:1562000/1‑93 (MQ=255)
cAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCt > 1:1951185/1‑93 (MQ=255)
gTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCa < 2:6051469/93‑1 (MQ=255)
gTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCa > 1:1786186/1‑93 (MQ=255)
gTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCa < 1:2842290/93‑1 (MQ=255)
gTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCa < 1:5640701/93‑1 (MQ=255)
gTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCa < 1:4239018/93‑1 (MQ=255)
tATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAg > 2:6339147/1‑93 (MQ=255)
tGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGt > 1:4206946/1‑93 (MQ=255)
tGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGaa < 1:5980836/93‑1 (MQ=255)
gCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAg < 1:4830910/93‑1 (MQ=255)
gCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAg < 1:3808097/93‑1 (MQ=255)
gCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAg < 1:1007097/93‑1 (MQ=255)
cTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGc < 2:3527237/93‑1 (MQ=255)
cTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGc > 2:5429663/1‑93 (MQ=255)
cTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGc < 2:6431624/93‑1 (MQ=255)
tttGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGt > 1:615207/1‑93 (MQ=255)
tGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCa > 1:1074429/1‑93 (MQ=255)
gccagccaGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAg < 2:5726286/93‑1 (MQ=255)
gccagccaGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAg < 1:6298296/93‑1 (MQ=255)
cagcGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAagag < 2:4991917/93‑1 (MQ=255)
cagcGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAagag > 2:3414954/1‑93 (MQ=255)
agcGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAgg > 2:3041298/1‑93 (MQ=255)
agcGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAgg > 1:3492884/1‑93 (MQ=255)
agcGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAgg < 1:3963405/93‑1 (MQ=255)
gcGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAggg > 2:3198198/1‑92 (MQ=255)
gcGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGt > 2:4138016/1‑93 (MQ=255)
gcGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGt < 1:5754558/93‑1 (MQ=255)
gcGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGt > 1:248244/1‑93 (MQ=255)
gcGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGt < 1:953696/93‑1 (MQ=255)
gTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTgg < 2:2474415/93‑1 (MQ=255)
tGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTgga > 1:3932682/1‑92 (MQ=255)
cagccagcCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGa < 2:3727743/93‑1 (MQ=255)
gccagccaTCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGCAGAGGTGGCGaaa > 2:1762363/1‑93 (MQ=255)
gccagccaTCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGaaa > 2:1000853/1‑93 (MQ=255)
gccagccaTCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGaaa < 1:2129248/93‑1 (MQ=255)
cagccaTCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGc > 2:5206361/1‑93 (MQ=255)
cagccaTCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGc > 2:706877/1‑93 (MQ=255)
agccaTCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGcc > 2:5125507/1‑93 (MQ=255)
agccaTCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGcc > 2:4969304/1‑93 (MQ=255)
ccaTCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCAt > 1:2660236/1‑93 (MQ=255)
caTCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATc < 1:3098078/93‑1 (MQ=255)
caTCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATc < 2:5095017/93‑1 (MQ=255)
tCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTa > 2:6031708/1‑93 (MQ=255)
tCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTa < 2:6176530/93‑1 (MQ=255)
tGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACg < 1:1584294/93‑1 (MQ=255)
aaTGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGAc < 1:2548288/93‑1 (MQ=255)
atgatgAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGAcc < 2:1851745/93‑1 (MQ=255)
gatgaGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGAccgc > 1:3613593/1‑93 (MQ=255)
gaGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCgg < 1:6079758/93‑1 (MQ=255)
|
TTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGA > NC_000913/3967136‑3967315
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAA > NC_000913/3967133‑3967319
|
TTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCC > SRR4302537.4340927/1‑94 (MQ=60)
TTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCC > SRR4302537.1571708/1‑94 (MQ=60)
ATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGA < SRR4302537.3295251/94‑1 (MQ=60)
TGCCGAACCCGCGCCTGACGCTAATACCCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCAACTGAATGATGAGCCGAAA < SRR4302537.2948085/94‑1 (MQ=60)
GCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAG < SRR4302537.3751988/94‑1 (MQ=60)
GCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAG < SRR4302537.3569341/94‑1 (MQ=60)
GCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAAAGATGAGCCGAAAG < SRR4302537.5686650/94‑1 (MQ=60)
CGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGC > SRR4302537.2399920/1‑94 (MQ=60)
CGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGC > SRR4302537.3039223/1‑94 (MQ=60)
GAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCG < SRR4302537.2766606/94‑1 (MQ=60)
AAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGC > SRR4302537.2195935/1‑94 (MQ=60)
AACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCA > SRR4302537.3094798/1‑94 (MQ=60)
ACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCAT > SRR4302537.287759/1‑94 (MQ=60)
ACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCAT < SRR4302537.1949337/94‑1 (MQ=60)
CGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGG > SRR4302537.250067/1‑94 (MQ=60)
CGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGG < SRR4302537.6064580/94‑1 (MQ=60)
CGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGG < SRR4302537.732912/94‑1 (MQ=60)
CGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGG > SRR4302537.3930848/1‑94 (MQ=60)
CGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGG > SRR4302537.2917560/1‑94 (MQ=60)
GCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGG > SRR4302537.5193666/1‑94 (MQ=60)
GCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGG < SRR4302537.3696998/94‑1 (MQ=60)
CCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGG < SRR4302537.335721/94‑1 (MQ=60)
CGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGC < SRR4302537.1229858/94‑1 (MQ=60)
GCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCG < SRR4302537.4538638/94‑1 (MQ=60)
CCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGACAGGCGCATGGGCGG > SRR4302537.6197793/1‑94 (MQ=60)
CTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGC < SRR4302537.3789400/94‑1 (MQ=60)
CTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGC > SRR4302537.3466482/1‑94 (MQ=60)
TGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCG < SRR4302537.2822651/94‑1 (MQ=60)
GACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGC > SRR4302537.1690860/1‑94 (MQ=60)
ACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCG > SRR4302537.3681711/1‑94 (MQ=60)
ACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCG < SRR4302537.6458619/94‑1 (MQ=60)
ACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCG > SRR4302537.5600872/1‑94 (MQ=60)
ACGCGAATAACCGGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCG < SRR4302537.2837154/94‑1 (MQ=60)
GCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTA > SRR4302537.418820/1‑94 (MQ=60)
GCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTA > SRR4302537.4077985/1‑94 (MQ=60)
GCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGAGGCGCGTA > SRR4302537.5215456/1‑94 (MQ=60)
ATACCCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCAT < SRR4302537.2696683/94‑1 (MQ=60)
ATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCAT > SRR4302537.3658704/1‑94 (MQ=60)
AACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCC > SRR4302537.6056214/1‑94 (MQ=60)
AACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCC > SRR4302537.2022052/1‑94 (MQ=60)
AACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCC > SRR4302537.2853592/1‑94 (MQ=60)
CCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAG > SRR4302537.2807037/1‑94 (MQ=60)
CTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGA > SRR4302537.5544694/1‑94 (MQ=60)
CTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGA < SRR4302537.5138736/94‑1 (MQ=60)
TGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGAT > SRR4302537.2668800/1‑94 (MQ=60)
GTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATG > SRR4302537.4514171/1‑94 (MQ=60)
GTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATG > SRR4302537.2918026/1‑94 (MQ=60)
CGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAG < SRR4302537.4115919/94‑1 (MQ=60)
CGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAG < SRR4302537.6483568/94‑1 (MQ=60)
CGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAG > SRR4302537.2653207/1‑94 (MQ=60)
GTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGC < SRR4302537.300666/94‑1 (MQ=60)
GTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGC > SRR4302537.4477107/1‑94 (MQ=60)
TCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCT > SRR4302537.1964754/1‑94 (MQ=60)
CAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTC > SRR4302537.2687499/1‑94 (MQ=60)
CAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTC < SRR4302537.3422649/94‑1 (MQ=60)
AGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCA < SRR4302537.3200565/94‑1 (MQ=60)
AGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCA > SRR4302537.4874047/1‑94 (MQ=60)
AGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCA > SRR4302537.393183/1‑94 (MQ=60)
AGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCA > SRR4302537.1798644/1‑94 (MQ=60)
GTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAG < SRR4302537.1862281/94‑1 (MQ=60)
GTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAG < SRR4302537.4268497/94‑1 (MQ=60)
GTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAG < SRR4302537.2862184/94‑1 (MQ=60)
GTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAG < SRR4302537.5679303/94‑1 (MQ=60)
TATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGG < SRR4302537.201308/94‑1 (MQ=60)
TATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGG > SRR4302537.1748387/1‑94 (MQ=60)
ATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGT > SRR4302537.4236302/1‑94 (MQ=60)
ATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGT > SRR4302537.6064820/1‑94 (MQ=60)
TGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTG < SRR4302537.4456350/94‑1 (MQ=60)
TGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTG > SRR4302537.2977488/1‑94 (MQ=60)
TGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCAATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTCCCATCCAGATGAAAGCTCAGGTG < SRR4302537.6312376/94‑1 (MQ=60)
GTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGA > SRR4302537.972528/1‑94 (MQ=60)
TTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAA > SRR4302537.4245512/1‑94 (MQ=60)
TTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAA > SRR4302537.1601734/1‑94 (MQ=60)
TGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAG < SRR4302537.6021885/94‑1 (MQ=60)
GCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGC < SRR4302537.1014047/94‑1 (MQ=60)
GCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGC < SRR4302537.3834798/94‑1 (MQ=60)
GCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGC < SRR4302537.4864275/94‑1 (MQ=60)
GCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGC < SRR4302537.1973237/94‑1 (MQ=60)
GCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGC < SRR4302537.3682733/94‑1 (MQ=60)
CTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCG > SRR4302537.3435818/1‑94 (MQ=60)
TTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGT > SRR4302537.619397/1‑94 (MQ=60)
TTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCA > SRR4302537.1081828/1‑94 (MQ=60)
TGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAG < SRR4302537.472746/94‑1 (MQ=60)
GCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGG < SRR4302537.2144155/94‑1 (MQ=60)
GCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGG < SRR4302537.6341435/94‑1 (MQ=60)
CCAGCCAGCGTGCAGCCAGCCATCTGAATGATTAGGCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGG > SRR4302537.5615014/1‑94 (MQ=60)
CCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGA > SRR4302537.1477651/1‑94 (MQ=60)
CCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGA > SRR4302537.2184520/1‑94 (MQ=60)
CAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAA < SRR4302537.6053639/94‑1 (MQ=60)
CAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAA < SRR4302537.4268862/94‑1 (MQ=60)
AGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAG > SRR4302537.2648296/1‑94 (MQ=60)
AGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAG < SRR4302537.651671/94‑1 (MQ=60)
CCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAG < SRR4302537.6148741/94‑1 (MQ=60)
CCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAG < SRR4302537.579389/94‑1 (MQ=60)
CCAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAG < SRR4302537.369911/94‑1 (MQ=60)
CAGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGG > SRR4302537.3517594/1‑94 (MQ=60)
AGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGT > SRR4302537.250011/1‑94 (MQ=60)
AGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGT < SRR4302537.3991126/94‑1 (MQ=60)
AGCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGT < SRR4302537.2471816/94‑1 (MQ=60)
GCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTG < SRR4302537.960280/94‑1 (MQ=60)
GCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTG < SRR4302537.2367112/94‑1 (MQ=60)
GCGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTG < SRR4302537.5793973/94‑1 (MQ=60)
CGTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGG < SRR4302537.3577766/94‑1 (MQ=60)
GTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGC > SRR4302537.1808314/1‑94 (MQ=60)
GTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGA > SRR4302537.3960163/1‑94 (MQ=60)
GTGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGAGGC > SRR4302537.3960164/1‑94 (MQ=60)
TGCAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCG > SRR4302537.1101073/1‑94 (MQ=60)
CAGCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAA > SRR4302537.4185597/1‑94 (MQ=60)
GCCAGCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAG < SRR4302537.2144225/94‑1 (MQ=60)
GCCATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCAT > SRR4302537.2678821/1‑94 (MQ=60)
CATCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCT < SRR4302537.3119701/94‑1 (MQ=60)
CATCTGAATGATGAGACGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCT < SRR4302537.1964184/94‑1 (MQ=60)
TCTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGATAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTAC < SRR4302537.3488430/94‑1 (MQ=60)
CTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACG > SRR4302537.2503968/1‑94 (MQ=60)
CTGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACG > SRR4302537.2301192/1‑94 (MQ=60)
TGAATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGA < SRR4302537.1595367/94‑1 (MQ=60)
AATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACC < SRR4302537.3700372/94‑1 (MQ=60)
AATGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACC < SRR4302537.2566140/94‑1 (MQ=60)
TGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGC < SRR4302537.5868101/94‑1 (MQ=60)
TGATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGC > SRR4302537.3639067/1‑94 (MQ=60)
GATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCC > SRR4302537.1050576/1‑94 (MQ=60)
ATGAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCG > SRR4302537.1316515/1‑94 (MQ=60)
GAGCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGA < SRR4302537.6121537/94‑1 (MQ=60)
GCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATG > SRR4302537.2386981/1‑94 (MQ=60)
GCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATG < SRR4302537.905306/94‑1 (MQ=60)
GCCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATG < SRR4302537.1131126/94‑1 (MQ=60)
CCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGA > SRR4302537.3629119/1‑94 (MQ=60)
CCGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGA > SRR4302537.2656565/1‑94 (MQ=60)
CGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAA < SRR4302537.1500112/94‑1 (MQ=60)
|
TTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAA > NC_000913/3967133‑3967319
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
