Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,007,907 |
+GG |
intergenic (+109/‑11) |
pldB → / → b4555 |
lysophospholipase L(2)/hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,007,907 | 1 | . | G | 93.3%
| 786.7
/ 45.8
| 240 | intergenic (+109/‑11) | pldB/b4555 | lysophospholipase L(2)/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (3/13); new base G (118/106); total (121/119) |
| Fisher's exact test for biased strand distribution p-value = 9.59e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.04e-01 |
| * | NC_000913 | 4,007,907 | 2 | . | G | 93.3%
| 782.7
/ 45.8
| 240 | intergenic (+109/‑11) | pldB/b4555 | lysophospholipase L(2)/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (3/13); new base G (118/106); total (121/119) |
| Fisher's exact test for biased strand distribution p-value = 9.59e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.90e-01 |
Only 100 of 259 total aligned reads displayed.
GTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGC‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACC > NC_000913/4007815‑4007995
||
gttgttGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑gcg‑‑cgc < 1:5785844/93‑1 (MQ=255)
gttgttGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑gcg‑‑cgc > 2:5642642/1‑93 (MQ=255)
ttgttgCGTCTGATTTAGATGGCACGTTACTTTCTCCCTACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑gcg‑‑cgcg < 1:1744041/93‑2 (MQ=255)
ttgttgCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑gcg‑‑cgcg > 2:6419199/1‑92 (MQ=255)
tGNTTTAGATGGCACGTTACTNTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACtt < 1:2931134/93‑1 (MQ=255)
tGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACtt < 2:5808225/93‑1 (MQ=255)
tGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACtt > 2:4256391/1‑93 (MQ=255)
aTTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCCC‑‑GCG‑‑CGG‑‑CATCAACTTtg > 2:4367853/1‑93 (MQ=255)
aTTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTtg > 2:3085684/1‑93 (MQ=255)
ttAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTtgtg > 2:6183796/1‑93 (MQ=255)
ttAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTtgtg > 2:3816457/1‑93 (MQ=255)
tAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTgtgt < 2:4556565/93‑1 (MQ=255)
gATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGttt < 2:2612971/93‑1 (MQ=255)
gATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGttt > 2:1416670/1‑93 (MQ=255)
gATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGttt > 2:1031705/1‑93 (MQ=255)
tGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGc < 2:2507125/93‑1 (MQ=255)
tGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGc > 1:5583278/1‑93 (MQ=255)
cACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGAc > 1:3891139/1‑93 (MQ=255)
aCGTTTCTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCT‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGAcc < 1:6016021/93‑1 (MQ=255)
aCGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGAcc < 2:952052/93‑1 (MQ=255)
aCGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGAcc < 2:3001511/93‑1 (MQ=255)
gTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCgg > 1:3626974/1‑93 (MQ=255)
gTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCgg > 2:2885573/1‑93 (MQ=255)
gTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCgg > 1:2258623/1‑93 (MQ=255)
gTTACTTTCTCCCGACCATACGTTATCCACTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCgg > 2:1543506/1‑93 (MQ=255)
tACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGgtc < 2:2428350/93‑1 (MQ=255)
tACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGgtc > 2:3887383/1‑93 (MQ=255)
aCTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGgtcg > 1:6411442/1‑93 (MQ=255)
cTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGgtcgt < 1:4882324/93‑1 (MQ=255)
tttCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGgtcgtc < 1:1213401/93‑1 (MQ=255)
tcCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTcacca > 1:104678/1‑93 (MQ=255)
cccGACCATACGTTATCCCCTTACGACAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTcaccac < 1:4242770/93‑1 (MQ=255)
ccGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACg > 1:1020938/1‑93 (MQ=255)
ccGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACg > 1:4398225/1‑93 (MQ=255)
cGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGt < 2:5419863/93‑1 (MQ=255)
cGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGt < 1:313097/93‑1 (MQ=255)
gACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGtt > 2:6005189/1‑93 (MQ=255)
gACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGtt < 2:5827393/93‑1 (MQ=255)
cATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAt > 2:4339633/1‑93 (MQ=255)
cATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAt > 2:2693337/1‑93 (MQ=255)
cATACGTGATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAt < 2:329821/93‑1 (MQ=255)
aTACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAtg > 1:2569692/1‑93 (MQ=255)
tACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAtgt < 2:3681274/93‑1 (MQ=255)
tACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAtgt > 1:1660232/1‑93 (MQ=255)
tACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCGGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAtgt < 1:3077740/93‑1 (MQ=255)
aCGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAtgtg < 1:6296262/93‑1 (MQ=255)
gTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTggg > 2:585496/1‑93 (MQ=255)
gTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTggg < 2:1197417/93‑1 (MQ=255)
tATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGc > 1:2379492/1‑93 (MQ=255)
tATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGc < 2:3336985/93‑1 (MQ=255)
aTCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCa < 1:5066801/93‑1 (MQ=255)
tCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCaa > 2:4094858/1‑93 (MQ=255)
tCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCaa > 1:4588468/1‑93 (MQ=255)
tCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCaa > 2:4689343/1‑93 (MQ=255)
ccccTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCaaa > 2:3481810/1‑93 (MQ=255)
ccccTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCaaa > 1:3744123/1‑93 (MQ=255)
ccccTCACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCaaa < 1:3693373/93‑1 (MQ=255)
ccTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAAtt > 1:1416524/1‑93 (MQ=255)
acTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAAtt < 2:1952725/92‑1 (MQ=255)
ttACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTcg > 1:1543363/1‑93 (MQ=255)
ttACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTcg > 1:4162746/1‑93 (MQ=255)
tACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTcgc < 2:2372731/93‑1 (MQ=255)
aCGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTcgcg > 1:4003209/1‑93 (MQ=255)
gCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGAt < 2:3168166/93‑1 (MQ=255)
gCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGAt > 2:3737324/1‑93 (MQ=255)
cAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATaa < 2:4204646/93‑1 (MQ=255)
cAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATaa > 2:2869948/1‑93 (MQ=255)
cAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATaa < 1:66776/93‑1 (MQ=255)
aaaGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAAt > 1:1171160/1‑93 (MQ=255)
aaaGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAAt < 2:4913742/93‑1 (MQ=255)
aaGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATc > 2:5691615/1‑93 (MQ=255)
aGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCt > 1:4938675/1‑93 (MQ=255)
aGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCt < 1:4652274/93‑1 (MQ=255)
aGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCt > 1:221576/1‑93 (MQ=255)
gAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTg < 2:5480859/93‑1 (MQ=255)
acctctGAAGCTGCCCA‑‑CC‑‑GCGCTCGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGga < 1:5749044/91‑1 (MQ=255)
aCTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGgag > 2:1443999/1‑93 (MQ=255)
aCTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGgag < 2:6162447/93‑1 (MQ=255)
ctctGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGgaga < 1:2319226/93‑1 (MQ=255)
ctctGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGgaga > 1:4358694/1‑93 (MQ=255)
tctGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGAt < 2:2191287/93‑1 (MQ=255)
tctGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGAt < 1:208964/93‑1 (MQ=255)
tctGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTCGTGTTTGCGACCGGTCGTCACCACGTTGATGGGGGGCAAATTCGCGATAATCTGGAGAt < 1:1868271/93‑1 (MQ=255)
ctGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGAtt < 1:5427209/93‑1 (MQ=255)
gAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTaa > 2:620188/1‑93 (MQ=255)
gAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTaa < 2:676809/93‑1 (MQ=255)
gAAGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTaa > 1:9560/1‑93 (MQ=255)
aGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGCTAATCTGGAGATTAAGt > 2:1832138/1‑93 (MQ=255)
aGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGt < 1:4805430/93‑1 (MQ=255)
aGCTGCTCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGt < 1:3384537/93‑1 (MQ=255)
gctgctCA‑‑CCGAGCG‑‑CGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTc < 2:5115510/93‑1 (MQ=255)
tgctCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCtt > 2:5631405/1‑93 (MQ=255)
tgctCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCtt > 2:1637058/1‑93 (MQ=255)
tgctCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCtt < 1:5156739/93‑1 (MQ=255)
gctCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTa > 1:2108367/1‑93 (MQ=255)
gctCA‑‑CC‑‑GCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTa > 1:4295954/1‑93 (MQ=255)
accgc‑‑gcg‑‑cgG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATg < 1:3273212/89‑1 (MQ=255)
ccgc‑‑gcg‑‑cgG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGa > 1:586988/4‑93 (MQ=255)
cgc‑‑gcg‑‑cgG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGAt < 1:5464032/91‑1 (MQ=255)
gcg‑‑cgg‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTAc < 2:5201963/93‑1 (MQ=255)
||
GTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCA‑‑CC‑‑GCG‑‑CGC‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACC > NC_000913/4007815‑4007995
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGC‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCCAA > NC_000913/4007815‑4008000
|
GTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGC‑‑G < SRR4302537.5825513/94‑1 (MQ=60)
TTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCTACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCgg < SRR4302537.1756201/94‑3 (MQ=60)
TTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCgg > SRR4302537.4386756/1‑92 (MQ=60)
GTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCggca > SRR4302537.5030281/1‑90 (MQ=60)
TGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATC > SRR4302537.1163189/1‑94 (MQ=60)
GCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCA < SRR4302537.4225499/94‑1 (MQ=60)
GCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCA < SRR4302537.1756359/94‑1 (MQ=60)
TGNTTTAGATGGCACGTTACTNTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTT < SRR4302537.2951716/94‑1 (MQ=60)
TGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTT < SRR4302537.4762409/94‑1 (MQ=60)
TGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTT < SRR4302537.2106517/94‑1 (MQ=60)
GATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTG > SRR4302537.338906/1‑94 (MQ=60)
GATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTG > SRR4302537.4864098/1‑94 (MQ=60)
TTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTG < SRR4302537.1179575/94‑1 (MQ=60)
AGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTT < SRR4302537.1593607/94‑1 (MQ=60)
GATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTG < SRR4302537.2844249/94‑1 (MQ=60)
GATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTG < SRR4302537.1678192/94‑1 (MQ=60)
ATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGC > SRR4302537.6483652/1‑94 (MQ=60)
ATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGC > SRR4302537.5621446/1‑94 (MQ=60)
GCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGAC > SRR4302537.3662815/1‑94 (MQ=60)
GCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGAC > SRR4302537.3918351/1‑94 (MQ=60)
GCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGAC < SRR4302537.4675904/94‑1 (MQ=60)
GCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGAC < SRR4302537.5354166/94‑1 (MQ=60)
GCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGAC < SRR4302537.5784702/94‑1 (MQ=60)
CACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACC > SRR4302537.4812784/1‑94 (MQ=60)
ACGTTTCTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCTCCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCG < SRR4302537.6057355/94‑1 (MQ=60)
ACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCG < SRR4302537.2325807/94‑1 (MQ=60)
CGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGG > SRR4302537.3652539/1‑94 (MQ=60)
CGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGG > SRR4302537.2274564/1‑94 (MQ=60)
GTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGT > SRR4302537.4495687/1‑94 (MQ=60)
GTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGT > SRR4302537.2167507/1‑94 (MQ=60)
TACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCG > SRR4302537.6455060/1‑94 (MQ=60)
CTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTC > SRR4302537.1821230/1‑94 (MQ=60)
CTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTC > SRR4302537.1304338/1‑94 (MQ=60)
CTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTC < SRR4302537.4916049/94‑1 (MQ=60)
TTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCA < SRR4302537.1221845/94‑1 (MQ=60)
TCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACC > SRR4302537.39036/1‑94 (MQ=60)
CTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCA > SRR4302537.105431/1‑94 (MQ=60)
TCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCAC < SRR4302537.5869958/94‑1 (MQ=60)
TCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCAC > SRR4302537.2062446/1‑94 (MQ=60)
CCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCAC < SRR4302537.3173183/94‑1 (MQ=60)
CCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACG < SRR4302537.3845811/94‑1 (MQ=60)
CCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACG > SRR4302537.4321638/1‑94 (MQ=60)
CCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACG > SRR4302537.1027972/1‑94 (MQ=60)
CCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACG > SRR4302537.4428572/1‑94 (MQ=60)
CCCGACCATACGTTATCCCCTTACGACAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACG < SRR4302537.4272265/94‑1 (MQ=60)
CCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGT > SRR4302537.1545571/1‑94 (MQ=60)
CGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTT < SRR4302537.3726402/94‑1 (MQ=60)
CGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTT < SRR4302537.315263/94‑1 (MQ=60)
ACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGA > SRR4302537.6441018/1‑94 (MQ=60)
CATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATG > SRR4302537.2587694/1‑94 (MQ=60)
ATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGT > SRR4302537.1671868/1‑94 (MQ=60)
TACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTATGTGTTTGCGACCGGTCGTCACCACGTTGATGTG > SRR4302537.1396897/1‑94 (MQ=60)
TACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCGGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTG < SRR4302537.3099177/94‑1 (MQ=60)
ACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGG < SRR4302537.493759/94‑1 (MQ=60)
ACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGG < SRR4302537.6339390/94‑1 (MQ=60)
CGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGG < SRR4302537.1554800/94‑1 (MQ=60)
CGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGG < SRR4302537.5925410/94‑1 (MQ=60)
GTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGG < SRR4302537.6144273/94‑1 (MQ=60)
GTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGG < SRR4302537.1112908/94‑1 (MQ=60)
GTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGG > SRR4302537.4984535/1‑94 (MQ=60)
GTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGG > SRR4302537.4187318/1‑94 (MQ=60)
GTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGG < SRR4302537.5190017/94‑1 (MQ=60)
TTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGC > SRR4302537.2396257/1‑94 (MQ=60)
TTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGGCACCACGCTGATGTGGGGC > SRR4302537.399723/1‑94 (MQ=60)
ATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAA > SRR4302537.4859020/1‑94 (MQ=60)
ATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAA < SRR4302537.5101680/94‑1 (MQ=60)
ATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAA > SRR4302537.4308029/1‑94 (MQ=60)
ATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAA > SRR4302537.3026559/1‑94 (MQ=60)
ATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAA > SRR4302537.4620200/1‑94 (MQ=60)
TCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAA > SRR4302537.5738171/1‑94 (MQ=60)
TCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAA > SRR4302537.3770413/1‑94 (MQ=60)
CCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAAT > SRR4302537.3731821/1‑94 (MQ=60)
CCCCTCACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAAT < SRR4302537.3719365/94‑1 (MQ=60)
CCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATT > SRR4302537.1426384/1‑94 (MQ=60)
CCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTC > SRR4302537.1751601/1‑94 (MQ=60)
CCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGCGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTC > SRR4302537.1050226/1‑94 (MQ=60)
CTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCG > SRR4302537.4191818/1‑94 (MQ=60)
CTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCG > SRR4302537.1554137/1‑94 (MQ=60)
CTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCG > SRR4302537.2014288/1‑94 (MQ=60)
TTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGC > SRR4302537.236063/1‑94 (MQ=60)
TACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCG > SRR4302537.4031231/1‑94 (MQ=60)
TACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCG > SRR4302537.790000/1‑94 (MQ=60)
CGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGAT < SRR4302537.2832155/94‑1 (MQ=60)
CGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGAT > SRR4302537.2259315/1‑94 (MQ=60)
CAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAAT > SRR4302537.1179312/1‑94 (MQ=60)
CAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAAT < SRR4302537.67270/94‑1 (MQ=60)
CAAAGAAACGCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAAT < SRR4302537.5906492/94‑1 (MQ=60)
AAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATC < SRR4302537.5476172/94‑1 (MQ=60)
AAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCT > SRR4302537.4972738/1‑94 (MQ=60)
AAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCT > SRR4302537.223158/1‑94 (MQ=60)
AGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTG < SRR4302537.5506685/94‑1 (MQ=60)
AGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTG < SRR4302537.4684440/94‑1 (MQ=60)
AGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTG < SRR4302537.4437502/94‑1 (MQ=60)
GAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGG < SRR4302537.832151/94‑1 (MQ=60)
GAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGG > SRR4302537.1058088/1‑94 (MQ=60)
AAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGA < SRR4302537.2336160/94‑1 (MQ=60)
AAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGA < SRR4302537.4423756/94‑1 (MQ=60)
ACCTCTGAAGCTGCCCACCGCGCTCGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAG < SRR4302537.5788420/94‑1 (MQ=60)
AACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAG < SRR4302537.4221917/94‑1 (MQ=60)
AACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAG < SRR4302537.3143593/94‑1 (MQ=60)
AACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAG > SRR4302537.5499166/1‑94 (MQ=60)
ACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGTGGCAAATTCGCGATAATCTGGAGA > SRR4302537.358338/1‑94 (MQ=60)
ACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGT > SRR4302537.3241723/1‑94 (MQ=60)
ACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGA > SRR4302537.2235537/1‑94 (MQ=60)
ACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGA > SRR4302537.4388857/1‑94 (MQ=60)
CTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGAT < SRR4302537.2335602/94‑1 (MQ=60)
CTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGAT < SRR4302537.4144312/94‑1 (MQ=60)
CTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGAT < SRR4302537.6344445/94‑1 (MQ=60)
CTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGAT > SRR4302537.5793704/1‑94 (MQ=60)
TCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATT < SRR4302537.210466/94‑1 (MQ=60)
TCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTCGTGTTTGCGACCGGTCGTCACCACGTTGATGGGGGGCAAATTCGCGATAATCTGGAGATT < SRR4302537.1881275/94‑1 (MQ=60)
CTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTA < SRR4302537.5464211/94‑1 (MQ=60)
TGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAA > SRR4302537.9627/1‑94 (MQ=60)
TGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAA > SRR4302537.2225061/1‑94 (MQ=60)
AGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTC < SRR4302537.4838574/94‑1 (MQ=60)
AGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTC < SRR4302537.3408516/94‑1 (MQ=60)
CTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTT > SRR4302537.438254/1‑94 (MQ=60)
TGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTA > SRR4302537.2123229/1‑94 (MQ=60)
TGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTA < SRR4302537.5192273/94‑1 (MQ=60)
TGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTA > SRR4302537.4325816/1‑94 (MQ=60)
CTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACA > SRR4302537.5268901/1‑94 (MQ=60)
CTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACA > SRR4302537.2936010/1‑94 (MQ=60)
TCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACAT > SRR4302537.1292041/1‑94 (MQ=60)
ACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGA > SRR4302537.591000/1‑94 (MQ=60)
ACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGA < SRR4302537.3296310/94‑1 (MQ=60)
CCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGAT < SRR4302537.2583053/94‑1 (MQ=60)
CGCG‑‑CGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTAC < SRR4302537.5306900/94‑1 (MQ=60)
CGCG‑‑CGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTAC < SRR4302537.6205836/94‑1 (MQ=60)
CGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATT < SRR4302537.5501301/94‑1 (MQ=60)
CGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTATTACATGATT < SRR4302537.3609248/94‑1 (MQ=60)
GCG‑‑CGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACC < SRR4302537.3068724/94‑1 (MQ=60)
G‑‑CGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTC > SRR4302537.406411/1‑94 (MQ=60)
G‑‑CGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTC > SRR4302537.1870029/1‑94 (MQ=60)
CGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCC > SRR4302537.3921832/1‑94 (MQ=60)
GG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCCA > SRR4302537.4144041/1‑94 (MQ=60)
G‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCCAA < SRR4302537.5201567/94‑1 (MQ=60)
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GTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGC‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCCAA > NC_000913/4007815‑4008000
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
