Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,023,045 |
G→A |
A156A (GCG→GCA) |
yigC → |
putative oxidoreductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,023,045 | 0 | G | A | 100.0%
| 631.7
/ NA
| 180 | A156A (GCG→GCA) | yigC | putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (91/89); total (91/89) |
Only 100 of 194 total aligned reads displayed.
TGGTGCGCCCTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCGCCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGATTGGT > NC_000913/4022955‑4023132
|
gtgCGCCCTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATgccgcaccgc < 1:5733097/93‑1 (MQ=255)
tgCGCCCTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCCCCGCt > 1:414122/1‑93 (MQ=255)
cgcCCTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGa < 1:425349/93‑1 (MQ=255)
ccTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTa > 2:2176235/1‑93 (MQ=255)
ccTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTa < 1:2085549/93‑1 (MQ=255)
ccTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCCGGCCGGAAGATGCCGCACCGCTGAGTa > 1:3037967/1‑93 (MQ=255)
cTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTTCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTAc > 2:1678091/1‑93 (MQ=255)
cTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGTCGCACCGCTGATTAc > 1:6466383/1‑93 (MQ=255)
cTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTAc > 2:2955259/1‑93 (MQ=255)
cTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTAc > 1:4508837/1‑93 (MQ=255)
tGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTAcc > 1:912272/1‑93 (MQ=255)
ccAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTg < 1:2108708/93‑1 (MQ=255)
caacaaAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTgg > 1:138961/1‑93 (MQ=255)
caacaaAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTgg < 1:2471537/93‑1 (MQ=255)
aacaaAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTggg > 2:2030573/1‑93 (MQ=255)
acaaAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTgggg > 1:2755657/1‑93 (MQ=255)
acaaAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTgggg < 1:2948373/93‑1 (MQ=255)
aaaaaaTCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGc > 2:135168/1‑93 (MQ=255)
aaaaaaTCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGc > 1:6328507/1‑93 (MQ=255)
aaaaaaTCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGc < 2:3770686/93‑1 (MQ=255)
aaaaaTCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCCTTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCt > 2:2385029/1‑93 (MQ=255)
aaTCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGAc < 1:4479311/93‑1 (MQ=255)
aTCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACa > 1:1871156/1‑93 (MQ=255)
aTCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCGGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACa < 2:358897/93‑1 (MQ=255)
gTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTg > 2:2302667/1‑93 (MQ=255)
tGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGAcgcg > 1:2390025/1‑93 (MQ=255)
gCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGAcgcgcg > 1:404526/1‑93 (MQ=255)
gACTTCGAGCTTAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGTCGCACCGCTGATTACATGGGGGCTGACAGAGACGTGCGGccgc > 2:6322291/1‑91 (MQ=255)
gACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCca < 1:6110951/93‑1 (MQ=255)
aCGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCcac < 2:442727/93‑1 (MQ=255)
cGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCcaca < 2:278709/93‑1 (MQ=255)
gTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACAt > 2:5338723/1‑93 (MQ=255)
ctCGATGTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACAt < 1:5158583/92‑1 (MQ=255)
cGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATaa > 1:2651209/1‑93 (MQ=255)
gATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATaaa > 1:1929591/1‑93 (MQ=255)
gATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATaaa > 1:875766/1‑93 (MQ=255)
aTCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAag > 2:5107854/1‑93 (MQ=255)
ctcAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAagag > 2:6190918/1‑93 (MQ=255)
ctcAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAagag < 2:2653365/93‑1 (MQ=255)
tcAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGc > 1:6408917/1‑93 (MQ=255)
cAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCg < 1:1732303/93‑1 (MQ=255)
aaTCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCgg > 2:4100885/1‑93 (MQ=255)
tCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCa < 2:4399169/93‑1 (MQ=255)
gCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGa < 1:2354051/93‑1 (MQ=255)
cATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGaa < 1:5100571/93‑1 (MQ=255)
aTTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATCAAGAGCGGCAGAAt > 1:3780499/1‑93 (MQ=255)
aTTCCCATTATGACCTGCTGGCCGGAAGATGACGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAAt > 2:2871512/1‑93 (MQ=255)
ttCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATc > 1:84158/1‑93 (MQ=255)
ttCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATc < 2:2134324/93‑1 (MQ=255)
ttCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATc < 2:463104/93‑1 (MQ=255)
tCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCt > 1:5622947/1‑93 (MQ=255)
tCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCt > 1:4379740/1‑93 (MQ=255)
tCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCt > 2:4539622/1‑93 (MQ=255)
cccATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTg < 2:4978435/93‑1 (MQ=255)
cccATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTg < 2:5982983/93‑1 (MQ=255)
ccATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTgg < 2:1036618/93‑1 (MQ=255)
cATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTggg < 2:249963/93‑1 (MQ=255)
ttATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCa < 2:743179/93‑1 (MQ=255)
tATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCAt > 2:1415363/1‑93 (MQ=255)
tATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCAt < 1:1532569/93‑1 (MQ=255)
aTGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCAtt < 2:1959428/93‑1 (MQ=255)
tGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCAttt > 2:1878478/1‑93 (MQ=255)
aCCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTAt > 2:79833/1‑93 (MQ=255)
ccTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATc > 1:1022797/1‑93 (MQ=255)
ccTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATc < 2:1853550/93‑1 (MQ=255)
ccTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATc > 1:63125/1‑93 (MQ=255)
ccTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATc < 2:3262565/93‑1 (MQ=255)
ctgctgGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCg > 1:3518138/1‑93 (MQ=255)
ctgctgGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCg > 1:1641746/1‑93 (MQ=255)
ctgctgGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCg > 1:4576810/1‑93 (MQ=255)
tgctgGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCGCATAAAGAGCGGCAGAATCTGGGCATTTATCGc > 1:3445198/1‑93 (MQ=255)
tgctgGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGc > 2:2902692/1‑93 (MQ=255)
tgctgGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGc > 1:1222887/1‑93 (MQ=255)
tgctgGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGc < 2:5262691/93‑1 (MQ=255)
gctgGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGAGGCAGAATCTGGGCATTTATCGcc > 2:6390191/1‑93 (MQ=255)
ctgGCCGGAACATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCca < 2:3917351/93‑1 (MQ=255)
tgGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCcag > 2:6149691/1‑93 (MQ=255)
ggCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCcagc > 2:3836849/1‑93 (MQ=255)
gCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTCTTGCcagca > 1:4867099/1‑93 (MQ=255)
gCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCcagca < 1:1075298/93‑1 (MQ=255)
gCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCcagca < 1:3909943/93‑1 (MQ=255)
gCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCcagca < 2:779606/93‑1 (MQ=255)
ccGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCcagcag < 2:1211427/93‑1 (MQ=255)
cGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCagcagc < 1:2328227/93‑1 (MQ=255)
cGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCagcagc > 1:3596305/1‑93 (MQ=255)
cGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCagcagc < 1:3928276/93‑1 (MQ=255)
cGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCagcagc > 2:159232/1‑93 (MQ=255)
ggAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCt > 1:1978738/1‑93 (MQ=255)
ggAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCt < 2:558834/93‑1 (MQ=255)
ggAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCt > 1:5051988/1‑93 (MQ=255)
gAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTg > 2:3221551/1‑93 (MQ=255)
aaGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGa < 1:4301891/93‑1 (MQ=255)
aaGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGa < 1:5528089/93‑1 (MQ=255)
aaGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGa < 2:2478567/93‑1 (MQ=255)
aGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGAt < 2:4508837/93‑1 (MQ=255)
aGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGAt < 1:1250434/93‑1 (MQ=255)
gATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGAtt < 2:5873836/93‑1 (MQ=255)
gATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGAtt > 2:3058604/1‑93 (MQ=255)
gccgcaccgcTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGATTGGt < 1:2051703/93‑1 (MQ=255)
gccgcaccgcTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGATTGGt < 1:1140025/93‑1 (MQ=255)
|
TGGTGCGCCCTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCGCCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGATTGGT > NC_000913/4022955‑4023132
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCGTGGTGCGCCCTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCGCCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGATTGGTAAAAAC > NC_000913/4022952‑4023138
|
GCGTGGTGCGCCCTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCA > SRR4302537.6005506/1‑94 (MQ=60)
CGTGGTGCGCCCTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCAC < SRR4302537.469814/94‑1 (MQ=60)
TGGTGCGCCCTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCG > SRR4302537.2296609/1‑94 (MQ=60)
GTGCGCCCTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCCCCGCT > SRR4302537.416991/1‑94 (MQ=60)
GTGCGCCCTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCT < SRR4302537.5772345/94‑1 (MQ=60)
TGCGCCCTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGCTCTCAATCGCATTCCCATTATGAGCTGCTGGGCGGCAGATGCCGCACCTCTG > SRR4302537.4331289/1‑94 (MQ=60)
GCGCCCTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGA < SRR4302537.196721/94‑1 (MQ=60)
CGCCCTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGAT < SRR4302537.428298/94‑1 (MQ=60)
GCCCTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATT < SRR4302537.1356430/94‑1 (MQ=60)
CCCTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTA < SRR4302537.4130252/94‑1 (MQ=60)
CCCTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTA > SRR4302537.418698/1‑94 (MQ=60)
CCCTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCCGGCCGGAAGATGCCGCACCGCTGAGTA > SRR4302537.3059137/1‑94 (MQ=60)
CCTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGTCGCACCGCTGATTAC > SRR4302537.6510186/1‑94 (MQ=60)
CCTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTAC > SRR4302537.4540015/1‑94 (MQ=60)
CCTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTAC < SRR4302537.2100250/94‑1 (MQ=60)
CTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACC < SRR4302537.3941167/94‑1 (MQ=60)
CTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACC > SRR4302537.19404/1‑94 (MQ=60)
CTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACC > SRR4302537.918566/1‑94 (MQ=60)
GCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTG > SRR4302537.1415661/1‑94 (MQ=60)
CCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGCTGCCGCACCGCTGATTACCTGG > SRR4302537.2113027/1‑94 (MQ=60)
CCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGG > SRR4302537.139953/1‑94 (MQ=60)
CCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGG > SRR4302537.855162/1‑94 (MQ=60)
CCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGG < SRR4302537.2123574/94‑1 (MQ=60)
CAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGG < SRR4302537.2488911/94‑1 (MQ=60)
CAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGG > SRR4302537.3544198/1‑94 (MQ=60)
AACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGG > SRR4302537.2774892/1‑94 (MQ=60)
ACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGG < SRR4302537.2969065/94‑1 (MQ=60)
CAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGC < SRR4302537.6493826/94‑1 (MQ=60)
CAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGC > SRR4302537.6371788/1‑94 (MQ=60)
AAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCT < SRR4302537.793729/94‑1 (MQ=60)
AAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCT < SRR4302537.5699167/94‑1 (MQ=60)
AAAAATCGTCTCTGGCGATCACGTCGCTCTCAATCGCATCCCCCTTGTGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTG < SRR4302537.1341205/94‑1 (MQ=60)
AATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACA > SRR4302537.1884179/1‑94 (MQ=60)
AATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACA < SRR4302537.4510298/94‑1 (MQ=60)
TCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGT < SRR4302537.3890679/94‑1 (MQ=60)
CTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCG > SRR4302537.2406855/1‑94 (MQ=60)
GGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCG > SRR4302537.407332/1‑94 (MQ=60)
CGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGC < SRR4302537.4295988/94‑1 (MQ=60)
GATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCC < SRR4302537.5599376/94‑1 (MQ=60)
GATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCC > SRR4302537.5271626/1‑94 (MQ=60)
GACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCAC > SRR4302537.1241924/1‑94 (MQ=60)
GACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCAC < SRR4302537.6152947/94‑1 (MQ=60)
ACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACA < SRR4302537.2056194/94‑1 (MQ=60)
CGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACAT < SRR4302537.517718/94‑1 (MQ=60)
GTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATA > SRR4302537.5036070/1‑94 (MQ=60)
CTCGATGTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATA < SRR4302537.5194131/94‑1 (MQ=60)
TCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAA < SRR4302537.1129087/94‑1 (MQ=60)
TCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAA > SRR4302537.2669752/1‑94 (MQ=60)
CGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAA > SRR4302537.1942984/1‑94 (MQ=60)
CGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAA > SRR4302537.881786/1‑94 (MQ=60)
ATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGA < SRR4302537.379633/94‑1 (MQ=60)
CTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGC > SRR4302537.6452527/1‑94 (MQ=60)
CAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGG < SRR4302537.1744390/94‑1 (MQ=60)
AATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGC > SRR4302537.5090617/1‑94 (MQ=60)
CGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGA < SRR4302537.2953251/94‑1 (MQ=60)
CGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGA > SRR4302537.4560631/1‑94 (MQ=60)
GCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAA > SRR4302537.3979661/1‑94 (MQ=60)
GCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAA < SRR4302537.2370651/94‑1 (MQ=60)
CATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATCAAGAGCGGCAGAAT > SRR4302537.3807049/1‑94 (MQ=60)
CATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAAT < SRR4302537.5135713/94‑1 (MQ=60)
CATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGAAAGTGACGCGCGGCCCACATAAAGAGCGGCAGAAT < SRR4302537.6358976/94‑1 (MQ=60)
ATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATC > SRR4302537.4522922/1‑94 (MQ=60)
ATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATC > SRR4302537.1711394/1‑94 (MQ=60)
ATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATC > SRR4302537.84773/1‑94 (MQ=60)
TTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGtaggaatcg > SRR4302537.620565/1‑85 (MQ=60)
TTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCT < SRR4302537.1198776/94‑1 (MQ=60)
TTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCT > SRR4302537.4409970/1‑94 (MQ=60)
TTCCCATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCT > SRR4302537.5661391/1‑94 (MQ=60)
CATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGC > SRR4302537.4394983/1‑94 (MQ=60)
CATTATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGC < SRR4302537.4733377/94‑1 (MQ=60)
TATGACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATT < SRR4302537.1543279/94‑1 (MQ=60)
ACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATC > SRR4302537.63598/1‑94 (MQ=60)
ACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATC > SRR4302537.165045/1‑94 (MQ=60)
ACCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATC > SRR4302537.1029838/1‑94 (MQ=60)
CCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCG > SRR4302537.4608485/1‑94 (MQ=60)
CCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCG > SRR4302537.1653246/1‑94 (MQ=60)
CCTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCG > SRR4302537.3543030/1‑94 (MQ=60)
CTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCGCATAAAGAGCGGCAGAATCTGGGCATTTATCGC > SRR4302537.3469569/1‑94 (MQ=60)
CTGCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGC > SRR4302537.1231385/1‑94 (MQ=60)
GCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCA < SRR4302537.6415081/94‑1 (MQ=60)
GCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCA < SRR4302537.6343025/94‑1 (MQ=60)
GCTGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCA < SRR4302537.3212432/94‑1 (MQ=60)
TGGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGC < SRR4302537.2438125/94‑1 (MQ=60)
GGCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTCTTGCCAGCA > SRR4302537.4900685/1‑94 (MQ=60)
GCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAG < SRR4302537.3937275/94‑1 (MQ=60)
GCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAG < SRR4302537.1082706/94‑1 (MQ=60)
GCCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGAGGCAGAATCTGGGCATTTATttgcagaac > SRR4302537.478992/1‑85 (MQ=60)
CCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGC < SRR4302537.2367260/94‑1 (MQ=60)
CCGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGC > SRR4302537.3621657/1‑94 (MQ=60)
CGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCT > SRR4302537.1992488/1‑94 (MQ=60)
CGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCT < SRR4302537.2344647/94‑1 (MQ=60)
CGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCT > SRR4302537.5086770/1‑94 (MQ=60)
CGGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCT < SRR4302537.3955724/94‑1 (MQ=60)
GGAAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTG > SRR4302537.3019303/1‑94 (MQ=60)
AAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGAT < SRR4302537.5924263/94‑1 (MQ=60)
AAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGAT < SRR4302537.4331788/94‑1 (MQ=60)
AAGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGAT < SRR4302537.5565824/94‑1 (MQ=60)
AGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACCTAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGATT < SRR4302537.3487698/94‑1 (MQ=60)
AGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGATT > SRR4302537.2518678/1‑94 (MQ=60)
AGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGATT > SRR4302537.1759010/1‑94 (MQ=60)
AGATGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGATT < SRR4302537.1259139/94‑1 (MQ=60)
TGCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGATTGGT < SRR4302537.2732057/94‑1 (MQ=60)
GCCGCCCCGCTGATTTCCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGATTGGTA < SRR4302537.2066098/94‑1 (MQ=60)
GCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGATTGGTA < SRR4302537.2066096/94‑1 (MQ=60)
GCCGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGATTGGTA < SRR4302537.1147943/94‑1 (MQ=60)
CGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGATTGGTAAA > SRR4302537.3112400/1‑94 (MQ=60)
CGCACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGATTGGTAAA > SRR4302537.5019143/1‑94 (MQ=60)
ACCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGATTGGTAAAAAC < SRR4302537.4441524/94‑1 (MQ=60)
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GCGTGGTGCGCCCTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCGCCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGATTGGTAAAAAC > NC_000913/4022952‑4023138
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
