Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,024,435 |
A→G |
I107V (ATT→GTT) |
ubiB → |
ferrisiderophore reductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,024,435 | 0 | A | G | 100.0%
| 652.6
/ NA
| 188 | I107V (ATT→GTT) | ubiB | ferrisiderophore reductase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (101/87); total (101/87) |
Only 100 of 197 total aligned reads displayed.
GTCATGGACCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGATTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC‑GTAACCCAAACCGTGATATCACCATT > NC_000913/4024345‑4024524
|
gTCATGGACCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGtt > 2:6132901/1‑93 (MQ=255)
gTCATGGACCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGtt < 2:4447379/93‑1 (MQ=255)
gTCATGGACCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGtt > 1:1616708/1‑93 (MQ=255)
gcATGGACCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGttt < 1:4423412/92‑1 (MQ=255)
cATGGACCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGtttt > 1:1033550/1‑93 (MQ=255)
cATGGACCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGtttt > 2:4090415/1‑93 (MQ=255)
cATGGACCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGtttt < 2:764375/93‑1 (MQ=255)
aCCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTg > 1:2529586/1‑93 (MQ=255)
cGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTgcg < 1:1699035/93‑1 (MQ=255)
gCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTgcgg < 2:4916712/93‑1 (MQ=255)
gCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTgcgg > 1:2458195/1‑93 (MQ=255)
gCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTgcgg > 1:3835102/1‑93 (MQ=255)
cATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGGTTgcggg < 2:3176707/93‑1 (MQ=255)
cATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTgcggg < 2:4849618/93‑1 (MQ=255)
cATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTgcggg > 1:2799364/1‑93 (MQ=255)
cATACTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTgcggg > 1:3723368/1‑93 (MQ=255)
aTCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTgcgggc < 2:4639404/93‑1 (MQ=255)
tCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGCGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTgcgggcg > 2:5263539/1‑93 (MQ=255)
tCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTgcgggcg > 1:4755919/1‑93 (MQ=255)
tCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCa < 2:5782584/93‑1 (MQ=255)
aaaGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCAcc < 1:2073876/93‑1 (MQ=255)
aGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCgg > 2:2851056/1‑93 (MQ=255)
atcatcAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGt > 2:2127573/1‑93 (MQ=255)
atcatcAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGt < 2:673065/93‑1 (MQ=255)
atcatcAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGt > 2:1033578/1‑93 (MQ=255)
atcatcAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGt < 1:5502330/93‑1 (MQ=255)
tcatcaAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGtt < 1:3576375/93‑1 (MQ=255)
atcaAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTtct < 2:39973/93‑1 (MQ=255)
atcaAACCGTGGTCGACATCCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTtct < 1:4995019/93‑1 (MQ=255)
caAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTctct > 1:5049951/1‑93 (MQ=255)
aaaTCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCtt > 1:3002139/1‑93 (MQ=255)
aaTCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTa < 2:1168895/93‑1 (MQ=255)
aTCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCGTAt > 2:2269123/1‑93 (MQ=255)
tCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATg > 1:2117346/1‑93 (MQ=255)
cGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGc < 2:5037048/93‑1 (MQ=255)
tGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGccc > 2:5009592/1‑93 (MQ=255)
tGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGccc > 1:2209224/1‑93 (MQ=255)
ggTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCg > 1:5078727/1‑93 (MQ=255)
ggTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCg > 2:6260406/1‑93 (MQ=255)
gTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGc < 1:2278316/93‑1 (MQ=255)
gTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGc > 1:5621612/1‑93 (MQ=255)
gTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGc < 1:243339/93‑1 (MQ=255)
gACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCg < 2:2237992/93‑1 (MQ=255)
aCATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGa > 1:3322787/1‑93 (MQ=255)
aCATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGa < 1:6398760/93‑1 (MQ=255)
aCATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGa < 2:6208314/93‑1 (MQ=255)
cATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGAt < 2:2597998/93‑1 (MQ=255)
aTTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGAtt < 1:3798311/93‑1 (MQ=255)
ttCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGAttt < 2:6194406/93‑1 (MQ=255)
tCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGAtttt > 1:4778172/1‑93 (MQ=255)
cccACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTgt > 1:757187/1‑92 (MQ=255)
cccACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGc > 2:3756294/1‑93 (MQ=255)
cccACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGc > 1:627512/1‑93 (MQ=255)
ccACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCt > 2:1483398/1‑93 (MQ=255)
ccACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCt < 2:2040873/93‑1 (MQ=255)
ccACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCt > 1:609747/1‑93 (MQ=255)
cACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTg < 2:3498556/93‑1 (MQ=255)
cACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTg > 1:651517/1‑93 (MQ=255)
aCGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGa > 2:5132186/1‑93 (MQ=255)
cGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGAc < 2:6366152/93‑1 (MQ=255)
ggAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACa > 1:1034428/1‑93 (MQ=255)
ggAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGGTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACa > 2:4331621/1‑93 (MQ=255)
gagaAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAg < 2:2780823/93‑1 (MQ=255)
gagaAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAg > 2:4342520/1‑93 (MQ=255)
agaAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGc < 2:3537623/93‑1 (MQ=255)
gaAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCg < 1:4359568/93‑1 (MQ=255)
aaGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGt < 2:3052642/93‑1 (MQ=255)
aaGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGt > 2:4671669/1‑93 (MQ=255)
aGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGtt < 2:19192/93‑1 (MQ=255)
aGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGtt < 2:295673/93‑1 (MQ=255)
gTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGgc > 1:3630621/1‑93 (MQ=255)
tGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATTCCCGCTCGATTTTGCTGACAGCGTTGgcg > 2:4468643/1‑93 (MQ=255)
tGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGgcg < 1:4108729/93‑1 (MQ=255)
ggCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCTGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGTGTTGgcgc < 2:6305232/93‑1 (MQ=255)
tGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCCGGCGGCACCGGGATCTCTTATGCCCGCTCGAGTTTGCTGACAGCGTTGGCGC‑GTa > 1:5165094/1‑93 (MQ=255)
gcgATGATGAAGAGCGTCCGCTGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTTGCGC‑GTAAcc > 2:3401309/1‑93 (MQ=255)
cgATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC‑GTAAccc > 1:847028/1‑93 (MQ=255)
gatgatGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC‑GTAACCCa < 2:3963125/93‑1 (MQ=255)
gatgatGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC‑GTAACCCa < 2:172374/93‑1 (MQ=255)
tgatgaAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC‑GTAACCCaaa < 1:3042810/93‑1 (MQ=255)
tgatgaAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC‑GTAACCCaaa < 1:5820893/93‑1 (MQ=255)
tgatgaAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC‑GTAACCCaaa < 1:88043/93‑1 (MQ=255)
tgatgaAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC‑GTAACCCaaa < 1:5375175/93‑1 (MQ=255)
atgaAGAGCGTCCGATGGTTTTATTGGCGGGGGGAACGGGGTTTTCTTTTCCCCCTTCGTTTTTG‑TTACAGCGGTTGCGCGGAAACCCAAAcg > 2:5860982/1‑92 (MQ=255)
tgaAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC‑GTAACCCAAACCg > 1:6334328/1‑93 (MQ=255)
tgaAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC‑GTAACCCAAACCg < 2:4967255/93‑1 (MQ=255)
aaGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC‑GTAACCCAAACCGTg < 1:3443450/93‑1 (MQ=255)
agagCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC‑GTAACCCAAACCGTGa > 1:1312561/1‑93 (MQ=255)
agagCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC‑GTAACCCAAACCGTGa > 1:5860998/1‑93 (MQ=255)
gagCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC‑GTAACCCAAACCGTGat > 1:6058635/1‑93 (MQ=255)
gagCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC‑GTAACCCAAACCGTGat < 1:138356/93‑1 (MQ=255)
agCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC‑GTAACCCAAACCGTGata > 2:5693460/1‑93 (MQ=255)
gCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC‑GTAACCCAAACCGTGatat > 1:4586816/1‑93 (MQ=255)
gTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC‑GTAACCCAAACCGTGATATCa > 1:4037108/1‑93 (MQ=255)
gTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC‑GTAACCCAAACCGTGATATCa > 1:1892876/1‑93 (MQ=255)
ccGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC‑GTAACCCAAACCGTGATATCAcc < 2:5474329/93‑1 (MQ=255)
ccGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC‑GTAACCCAAACCGTGATATCAcc < 2:2058217/93‑1 (MQ=255)
gatggtTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC‑GTAACCCAAACCGTGATATCACCAt > 1:3116850/1‑93 (MQ=255)
atggtTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC‑GTAACCCAAACCGTGATATCACCAtt < 1:4927173/93‑1 (MQ=255)
atggtTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC‑GTAACCCAAACCGTGATATCACCAtt > 2:2383838/1‑93 (MQ=255)
|
GTCATGGACCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGATTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC‑GTAACCCAAACCGTGATATCACCATT > NC_000913/4024345‑4024524
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCAGTCATGGACCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGATTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAACCGTGATATCACCATTTACT > NC_000913/4024342‑4024528
|
GCAGTCATGGACCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGG < SRR4302537.308632/94‑1 (MQ=60)
GCAGTCATGGACCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGG < SRR4302537.1416622/94‑1 (MQ=60)
AGTCATGGACCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTT > SRR4302537.1627999/1‑94 (MQ=60)
TCATGGACCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTT > SRR4302537.1040671/1‑94 (MQ=60)
TCATGGACCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTT < SRR4302537.4684992/94‑1 (MQ=60)
TCATGGACCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTT > SRR4302537.5101202/1‑94 (MQ=60)
GCATGGACCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTT < SRR4302537.4453962/94‑1 (MQ=60)
CATGGACCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTG > SRR4302537.802834/1‑94 (MQ=60)
GGACCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATT > SRR4302537.3061017/1‑94 (MQ=60)
GACCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTG > SRR4302537.5869027/1‑94 (MQ=60)
GACCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTG > SRR4302537.2547336/1‑94 (MQ=60)
CCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCG < SRR4302537.6178562/94‑1 (MQ=60)
CGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGG > SRR4302537.4405397/1‑94 (MQ=60)
CGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGG > SRR4302537.3861980/1‑94 (MQ=60)
CGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGG > SRR4302537.2475485/1‑94 (MQ=60)
CGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGG < SRR4302537.1710916/94‑1 (MQ=60)
GCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGG > SRR4302537.2818937/1‑94 (MQ=60)
GCATACTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGG > SRR4302537.3749532/1‑94 (MQ=60)
CATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGG > SRR4302537.3710124/1‑94 (MQ=60)
ATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGCTTGCGGGCG > SRR4302537.2631477/1‑94 (MQ=60)
ATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCG > SRR4302537.4788775/1‑94 (MQ=60)
AAAGATCATCAAATCGTGGTCGACATTCCCCACGGTGAAGCGTGGCTGCGCGATGATGAAGAGCGGCCGATGGTTTTGATTGCGGGCGGCACCG > SRR4302537.3787483/1‑94 (MQ=60)
AAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCG < SRR4302537.3185483/94‑1 (MQ=60)
AAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCG < SRR4302537.2088482/94‑1 (MQ=60)
GATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGT < SRR4302537.4802790/94‑1 (MQ=60)
ATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTT < SRR4302537.5539900/94‑1 (MQ=60)
TCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTC < SRR4302537.3601591/94‑1 (MQ=60)
CATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCT > SRR4302537.6339827/1‑94 (MQ=60)
ATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTC < SRR4302537.5847396/94‑1 (MQ=60)
ATCAAACCGTGGTCGACATCCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTC < SRR4302537.5029440/94‑1 (MQ=60)
TCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCT > SRR4302537.5084719/1‑94 (MQ=60)
CAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTT > SRR4302537.3023057/1‑94 (MQ=60)
CAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTT > SRR4302537.6120280/1‑94 (MQ=60)
ATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATG < SRR4302537.2218807/94‑1 (MQ=60)
ATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATG > SRR4302537.2474418/1‑94 (MQ=60)
ATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATG > SRR4302537.2132260/1‑94 (MQ=60)
TCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGC > SRR4302537.956343/1‑94 (MQ=60)
GTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCC > SRR4302537.2224804/1‑94 (MQ=60)
GTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCC > SRR4302537.1935688/1‑94 (MQ=60)
GTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCC < SRR4302537.2907635/94‑1 (MQ=60)
TGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCG > SRR4302537.5113690/1‑94 (MQ=60)
GGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGC > SRR4302537.5660047/1‑94 (MQ=60)
GTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCT < SRR4302537.245064/94‑1 (MQ=60)
GTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCT < SRR4302537.2294399/94‑1 (MQ=60)
CGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGTACCGGGTTCTCTTATGCCCGCTCG > SRR4302537.656609/1‑94 (MQ=60)
CGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCG < SRR4302537.6490582/94‑1 (MQ=60)
GACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGA > SRR4302537.3346294/1‑94 (MQ=60)
ACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGAT < SRR4302537.6442327/94‑1 (MQ=60)
ACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGAT > SRR4302537.3114582/1‑94 (MQ=60)
CATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATT > SRR4302537.5332993/1‑94 (MQ=60)
ATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTT < SRR4302537.3824957/94‑1 (MQ=60)
ATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTT > SRR4302537.1513275/1‑94 (MQ=60)
ATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTT < SRR4302537.3984468/94‑1 (MQ=60)
TTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTT > SRR4302537.4811159/1‑94 (MQ=60)
CCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGT > SRR4302537.762356/1‑94 (MQ=60)
CCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGC > SRR4302537.631786/1‑94 (MQ=60)
CCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCT > SRR4302537.613914/1‑94 (MQ=60)
CCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCT > SRR4302537.5909496/1‑94 (MQ=60)
CCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTG > SRR4302537.3634115/1‑94 (MQ=60)
CCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTG > SRR4302537.655958/1‑94 (MQ=60)
CACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGA > SRR4302537.865565/1‑94 (MQ=60)
ACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGAC < SRR4302537.638928/94‑1 (MQ=60)
CGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATTCCCGCTCGATTTTGCTGACA > SRR4302537.4508663/1‑94 (MQ=60)
CGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACA > SRR4302537.1041555/1‑94 (MQ=60)
GGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAG < SRR4302537.3501866/94‑1 (MQ=60)
GGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAG > SRR4302537.5628820/1‑94 (MQ=60)
GAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGT < SRR4302537.4389737/94‑1 (MQ=60)
AGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTG < SRR4302537.1837912/94‑1 (MQ=60)
GCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGG < SRR4302537.1128671/94‑1 (MQ=60)
GCGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGG < SRR4302537.2362956/94‑1 (MQ=60)
CGTGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGC > SRR4302537.3656205/1‑94 (MQ=60)
TGGCTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGC < SRR4302537.4137436/94‑1 (MQ=60)
CTGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCCGGCGGCACCGGGATCTCTTATGCCCGCTCGAGTTTGCTGACAGCGTTGGCGCGTA > SRR4302537.5200684/1‑94 (MQ=60)
TGCGCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAA > SRR4302537.5146048/1‑94 (MQ=60)
GCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCC > SRR4302537.852828/1‑94 (MQ=60)
GCGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCC > SRR4302537.1681972/1‑94 (MQ=60)
CGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCA > SRR4302537.4984235/1‑94 (MQ=60)
CGATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCA > SRR4302537.4921031/1‑94 (MQ=60)
GATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAA > SRR4302537.3767915/1‑94 (MQ=60)
ATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAA > SRR4302537.5522844/1‑94 (MQ=60)
ATGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAA < SRR4302537.134641/94‑1 (MQ=60)
TGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAAC < SRR4302537.3064009/94‑1 (MQ=60)
TGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAAC < SRR4302537.3426579/94‑1 (MQ=60)
TGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAAC < SRR4302537.5860788/94‑1 (MQ=60)
TGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAAC < SRR4302537.88681/94‑1 (MQ=60)
TGATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAAC < SRR4302537.5411929/94‑1 (MQ=60)
ATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAACCG > SRR4302537.2103249/1‑94 (MQ=60)
ATGAAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAACCG > SRR4302537.6377636/1‑94 (MQ=60)
AAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAACCGTGA < SRR4302537.3467812/94‑1 (MQ=60)
AAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAACCGTGA > SRR4302537.5901190/1‑94 (MQ=60)
AAGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAACCGTGA > SRR4302537.1321697/1‑94 (MQ=60)
AGAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAACCGTGAT > SRR4302537.6100256/1‑94 (MQ=60)
GAGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAACCGTGATA < SRR4302537.139347/94‑1 (MQ=60)
AGCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAACCGTGATAT > SRR4302537.4618541/1‑94 (MQ=60)
GCGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAACCGTGATATC < SRR4302537.22462/94‑1 (MQ=60)
CGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAACCGTGATATCA > SRR4302537.1906032/1‑94 (MQ=60)
CGTCCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAACCGTGATATCA > SRR4302537.4065358/1‑94 (MQ=60)
CCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAACCGTGATATCACCA > SRR4302537.4066882/1‑94 (MQ=60)
CCGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAACCGTGATATCACCA < SRR4302537.2488334/94‑1 (MQ=60)
CGATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAACCGTGATATCACCAT > SRR4302537.3138617/1‑94 (MQ=60)
GATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAACCGTGATATCACCATT > SRR4302537.3853404/1‑94 (MQ=60)
ATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAACCGTGATATCACCATTT < SRR4302537.4961143/94‑1 (MQ=60)
ATGGTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAACCGTGATATCACCATTT < SRR4302537.427292/94‑1 (MQ=60)
GTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAACCGTGATATCACCATTTACT < SRR4302537.1593832/94‑1 (MQ=60)
GTTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAACCGTGATATCACCATTTACT > SRR4302537.3173569/1‑94 (MQ=60)
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GCAGTCATGGACCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGATTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAACCGTGATATCACCATTTACT > NC_000913/4024342‑4024528
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
