Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,041,126 |
A→G |
E43G (GAG→GGG) |
dsbA → |
protein disulfide isomerase I |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,041,126 | 0 | A | G | 99.6%
| 842.9
/ NA
| 246 | E43G (GAG→GGG) | dsbA | protein disulfide isomerase I |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (100/145); minor base C (0/1); total (100/146) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 253 total aligned reads displayed.
TAGCGTTTAGCGCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGAGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTGCCGGAAGGCG > NC_000913/4041036‑4041215
|
tagcgtttagcgCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGt < 1:4135300/93‑1 (MQ=255)
agcgttaagcgCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACCCTACCCTGGAAAACCCGGTAGCTGGCACGCCGCAAGTGCTGGGGtt < 2:6311705/93‑1 (MQ=255)
gcgtttagcgCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGttt < 1:869458/93‑1 (MQ=255)
cgtttagcgCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGtttt < 2:5804849/93‑1 (MQ=255)
cgtttagcgCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGtttt < 1:5676750/93‑1 (MQ=255)
cgtttagcgCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGtttt < 2:724962/93‑1 (MQ=255)
gtttagcgCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGttttt < 2:1161153/93‑1 (MQ=255)
gtttagcgCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGttttt > 2:2672828/1‑93 (MQ=255)
tttagcgCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTtc > 1:3737391/1‑93 (MQ=255)
tttagcgCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTtc < 2:1598417/93‑1 (MQ=255)
tttagcgCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTtc < 2:4759755/93‑1 (MQ=255)
tttagcgCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTtc > 2:611776/1‑93 (MQ=255)
agcgCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTctct < 1:6268900/93‑1 (MQ=255)
gcgcATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCtctt < 2:1926773/93‑1 (MQ=255)
gcgcATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCtctt > 2:6200727/1‑93 (MQ=255)
cgcATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCtcttt < 1:2897813/93‑1 (MQ=255)
cATCGGCGGCGCAGGATGAAGATGGTAAACAGTACACTACCCTGGTAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTGtctttct > 2:2349285/1‑93 (MQ=255)
aTCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCtctttctt < 1:3937175/93‑1 (MQ=255)
tCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTttcttc < 1:3178626/93‑1 (MQ=255)
cggcggCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTtcttct < 1:2157997/93‑1 (MQ=255)
ggcggcGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTg > 2:4539321/1‑93 (MQ=255)
gcggcgCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGc > 1:5292122/1‑93 (MQ=255)
cAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCAc < 2:2742933/93‑1 (MQ=255)
cAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCAc < 2:6434717/93‑1 (MQ=255)
tATGAAGATGGTAAACAGTTCACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGGAAGTGCTGGCGTTTTTATCTTTCTTCTGCCCGCCCTGc < 2:5799093/93‑1 (MQ=255)
aTGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCt < 2:5679543/93‑1 (MQ=255)
aaGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATc < 1:1655201/93‑1 (MQ=255)
aGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCa > 2:831667/1‑93 (MQ=255)
aGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCa < 2:5581896/93‑1 (MQ=255)
gATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAg > 1:5138599/1‑93 (MQ=255)
aTGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGt < 2:5964758/93‑1 (MQ=255)
tGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGtt < 2:1285851/93‑1 (MQ=255)
tGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGtt < 2:3036487/93‑1 (MQ=255)
tGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGtt > 1:428259/1‑93 (MQ=255)
tGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGtt > 1:3284196/1‑93 (MQ=255)
tGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGtt < 2:3715031/93‑1 (MQ=255)
ggTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGttt < 1:739774/93‑1 (MQ=255)
aaaCAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTgaa < 1:1054531/93‑1 (MQ=255)
gTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGt < 1:4636080/93‑1 (MQ=255)
gTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGt > 1:4175518/1‑93 (MQ=255)
gTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGt > 1:198558/1‑93 (MQ=255)
gTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGt > 2:5469604/1‑93 (MQ=255)
gTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGt > 1:984194/1‑93 (MQ=255)
tACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGATGAAGtt > 1:5471594/1‑93 (MQ=255)
acacTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTc < 1:434717/93‑1 (MQ=255)
acacTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTc > 1:1391627/1‑93 (MQ=255)
acTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTg < 2:1038773/93‑1 (MQ=255)
cTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGc < 2:4613595/93‑1 (MQ=255)
tACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCa < 2:3411923/93‑1 (MQ=255)
aCCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCat > 1:5989275/1‑93 (MQ=255)
cccTGGAAAAACCGGTAGCTGGCGCGTCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCata < 1:5707144/93‑1 (MQ=255)
cccTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCata > 1:6345761/1‑93 (MQ=255)
cccTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCata < 2:206743/93‑1 (MQ=255)
ccTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCatat < 1:4458889/93‑1 (MQ=255)
ccTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCatat > 1:3393939/1‑93 (MQ=255)
cTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATAtt > 1:956773/1‑93 (MQ=255)
cTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATAtt < 2:3434777/93‑1 (MQ=255)
tGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATAttt > 2:396486/1‑93 (MQ=255)
ggAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTc < 1:3102991/93‑1 (MQ=255)
ggAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTc > 2:3265333/1‑93 (MQ=255)
gAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCt < 2:437646/93‑1 (MQ=255)
gAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCt > 1:3344827/1‑93 (MQ=255)
aaaaaCCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTg > 1:5657153/1‑93 (MQ=255)
aaaaCCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGa < 1:11701/93‑1 (MQ=255)
aaCCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATa < 1:4521207/93‑1 (MQ=255)
aaCCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATa < 1:2984517/93‑1 (MQ=255)
aCCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAANAAGTTCTGCATATTTNTNANaa > 1:3495899/1‑93 (MQ=255)
aCCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATaa < 2:1233771/93‑1 (MQ=255)
aCCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATaa < 1:6399192/93‑1 (MQ=255)
ccGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAAt < 2:5983396/93‑1 (MQ=255)
ccGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAAt < 2:4020556/93‑1 (MQ=255)
ggTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAAtgt < 1:6139432/93‑1 (MQ=255)
ggTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAAtgt < 2:2003462/93‑1 (MQ=255)
ggTAGCTGGCGCGCCGCAAGTGCTGGGGATTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAAtgt > 2:3529193/1‑93 (MQ=255)
aGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTgaa < 2:2507707/93‑1 (MQ=255)
aGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTgaa < 2:5327540/93‑1 (MQ=255)
aGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTgaa < 2:1372496/93‑1 (MQ=255)
tGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTgaagaa < 2:3100272/93‑1 (MQ=255)
tGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTgaagaa > 1:2687979/1‑93 (MQ=255)
tGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTgaagaa < 2:4818166/93‑1 (MQ=255)
ggCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGaaa < 2:5500301/93‑1 (MQ=255)
gcgcgcCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGaaaa < 2:5289706/93‑1 (MQ=255)
gcgcCGCAAGTGCTGGGGTTTTTCTCTGTCGTCTGCCCGCACTGCTATCAGTTTGAAGAAGTGCTGCATATTTCTGATAATGTGAAGaaaaaa < 2:922726/93‑1 (MQ=255)
cgccgcAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAAc < 2:904838/93‑1 (MQ=255)
cgccgcAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAAc < 1:2336064/93‑1 (MQ=255)
cgccgcAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAAc < 1:4838529/93‑1 (MQ=255)
gccgcAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACt < 1:5917381/93‑1 (MQ=255)
gcgcAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTg < 2:6155735/92‑1 (MQ=255)
ccgcAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTg > 1:2072204/1‑93 (MQ=255)
cgcAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTGc > 1:491400/1‑93 (MQ=255)
cAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTGCCg > 2:151896/1‑93 (MQ=255)
cAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTGCCg > 2:3352856/1‑93 (MQ=255)
cAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTGCCg < 1:5201354/93‑1 (MQ=255)
aGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTATGCATATTTCTGATAATGTGAAGAAAAAACTGCCGGa < 1:4233231/93‑1 (MQ=255)
gTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTGCCGGaa < 1:5372978/93‑1 (MQ=255)
tGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTGCCGGAAg < 1:5429487/93‑1 (MQ=255)
tGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTGCCGGAAg < 2:5765679/93‑1 (MQ=255)
tGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTGCCGGAAg < 2:4159534/93‑1 (MQ=255)
gCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTGCCGGAAgg < 2:2830497/93‑1 (MQ=255)
tGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTGCCGGAAGGCg > 2:1873591/1‑93 (MQ=255)
|
TAGCGTTTAGCGCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGAGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTGCCGGAAGGCG > NC_000913/4041036‑4041215
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTTTAGCGTTTAGCGCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGAGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTGCCGGAAGGCGTGA > NC_000913/4041033‑4041218
|
TTTTAGCGTTTAGCGCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGG < SRR4302537.1976732/94‑1 (MQ=60)
TTTAGCGTTTAGCGCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGG > SRR4302537.3577012/1‑94 (MQ=60)
TAGCGTTTAGCGCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTT < SRR4302537.4164152/94‑1 (MQ=60)
GCGTTTAGCGCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTT < SRR4302537.875428/94‑1 (MQ=60)
GCGTTTAGCGCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGATTT > SRR4302537.4213438/1‑94 (MQ=60)
CGTTTAGCGCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTT < SRR4302537.5715592/94‑1 (MQ=60)
CGTTTAGCGCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTT > SRR4302537.4523415/1‑94 (MQ=60)
GTTTAGCGCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTC > SRR4302537.3763634/1‑94 (MQ=60)
TTTAGCGCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCT > SRR4302537.4560324/1‑94 (MQ=60)
TTAGCGCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTC > SRR4302537.5461100/1‑94 (MQ=60)
AGCGCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTT < SRR4302537.6311924/94‑1 (MQ=60)
AGCGCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTT < SRR4302537.5325516/94‑1 (MQ=60)
CGCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTC < SRR4302537.2918171/94‑1 (MQ=60)
GCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCT < SRR4302537.5507196/94‑1 (MQ=60)
GCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCT < SRR4302537.780236/94‑1 (MQ=60)
GCATCGGCGGCGCAGTATGAACATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCT < SRR4302537.4332547/94‑1 (MQ=60)
ATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTC < SRR4302537.3964698/94‑1 (MQ=60)
ATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTC > SRR4302537.3340547/1‑94 (MQ=60)
TCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCT < SRR4302537.3200971/94‑1 (MQ=60)
CGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTG < SRR4302537.2173207/94‑1 (MQ=60)
GGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGC > SRR4302537.5328491/1‑94 (MQ=60)
CGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCC > SRR4302537.2912687/1‑94 (MQ=60)
CGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCC > SRR4302537.4260545/1‑94 (MQ=60)
CGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCA > SRR4302537.2939153/1‑94 (MQ=60)
CAGTATGAAGATGCTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACT < SRR4302537.5756063/94‑1 (MQ=60)
TATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCT < SRR4302537.4201553/94‑1 (MQ=60)
TATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCT > SRR4302537.1348565/1‑94 (MQ=60)
TGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTAT < SRR4302537.4876832/94‑1 (MQ=60)
TGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTAT > SRR4302537.6398649/1‑94 (MQ=60)
AAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCA < SRR4302537.1666801/94‑1 (MQ=60)
AGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAG > SRR4302537.5174009/1‑94 (MQ=60)
GATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGT < SRR4302537.5233781/94‑1 (MQ=60)
GATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGT < SRR4302537.606560/94‑1 (MQ=60)
GATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGT < SRR4302537.3429346/94‑1 (MQ=60)
ATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTT > SRR4302537.431240/1‑94 (MQ=60)
ATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTT > SRR4302537.2449555/1‑94 (MQ=60)
ATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTT > SRR4302537.3307385/1‑94 (MQ=60)
GGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTG < SRR4302537.744821/94‑1 (MQ=60)
AAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAG < SRR4302537.1061807/94‑1 (MQ=60)
AACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGA > SRR4302537.2112134/1‑94 (MQ=60)
ACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTTGAGAA > SRR4302537.5021751/1‑94 (MQ=60)
ACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAA < SRR4302537.1270542/94‑1 (MQ=60)
CAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAG < SRR4302537.729730/94‑1 (MQ=60)
CAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAG < SRR4302537.5701552/94‑1 (MQ=60)
CAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAG < SRR4302537.5260962/94‑1 (MQ=60)
AGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGT > SRR4302537.990991/1‑94 (MQ=60)
AGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGT > SRR4302537.1934090/1‑94 (MQ=60)
AGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGT > SRR4302537.199974/1‑94 (MQ=60)
AGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGT < SRR4302537.2509598/94‑1 (MQ=60)
AGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGT > SRR4302537.4204671/1‑94 (MQ=60)
GTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGATGAAGTT > SRR4302537.5508925/1‑94 (MQ=60)
GTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTT < SRR4302537.4668148/94‑1 (MQ=60)
TACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTC < SRR4302537.1065266/94‑1 (MQ=60)
TACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTC < SRR4302537.3417096/94‑1 (MQ=60)
TACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTC > SRR4302537.1401331/1‑94 (MQ=60)
ACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCT < SRR4302537.3164179/94‑1 (MQ=60)
ACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCT < SRR4302537.4678040/94‑1 (MQ=60)
ACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCT < SRR4302537.437748/94‑1 (MQ=60)
ACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGATTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGC > SRR4302537.901860/1‑94 (MQ=60)
CTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCA < SRR4302537.215168/94‑1 (MQ=60)
CTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCA > SRR4302537.5414994/1‑94 (MQ=60)
TACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCAT > SRR4302537.3697883/1‑94 (MQ=60)
TACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCAT > SRR4302537.6030406/1‑94 (MQ=60)
ACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATA > SRR4302537.1501257/1‑94 (MQ=60)
ACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATA > SRR4302537.3867873/1‑94 (MQ=60)
ACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATA > SRR4302537.6389103/1‑94 (MQ=60)
CCCTGGAAAAACCGGTAGCTGGCGCGTCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATAT < SRR4302537.5746199/94‑1 (MQ=60)
CCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATAT > SRR4302537.6383515/1‑94 (MQ=60)
CCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATAT > SRR4302537.3417978/1‑94 (MQ=60)
CCTTGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATT > SRR4302537.574512/1‑94 (MQ=60)
CCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGCAGAAGTTCTGCATATT > SRR4302537.4753327/1‑94 (MQ=60)
CCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATT < SRR4302537.4489720/94‑1 (MQ=60)
CCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATT > SRR4302537.4307029/1‑94 (MQ=60)
CCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATT > SRR4302537.963372/1‑94 (MQ=60)
CTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTT > SRR4302537.292255/1‑94 (MQ=60)
CTGGAAAAACCGCTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTT < SRR4302537.2068662/94‑1 (MQ=60)
TGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTC > SRR4302537.3559785/1‑94 (MQ=60)
GGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCT > SRR4302537.5534164/1‑94 (MQ=60)
GGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCT < SRR4302537.3124659/94‑1 (MQ=60)
GGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCT > SRR4302537.3368507/1‑94 (MQ=60)
GAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTG > SRR4302537.5695867/1‑94 (MQ=60)
GAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGCGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTG < SRR4302537.5977275/94‑1 (MQ=60)
AAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGAT < SRR4302537.11786/94‑1 (MQ=60)
AAACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATA < SRR4302537.6265581/94‑1 (MQ=60)
AACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAANAAGTTCTGCATATTTNTNANAA > SRR4302537.3520630/1‑94 (MQ=60)
AACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAA > SRR4302537.4332184/1‑94 (MQ=60)
AACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAA < SRR4302537.3005374/94‑1 (MQ=60)
AACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAA < SRR4302537.4552481/94‑1 (MQ=60)
ACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGTTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAAT < SRR4302537.3269533/94‑1 (MQ=60)
ACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAAT < SRR4302537.6442761/94‑1 (MQ=60)
ACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAAT < SRR4302537.706459/94‑1 (MQ=60)
ACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAAT < SRR4302537.100608/94‑1 (MQ=60)
ACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAAT < SRR4302537.4047555/94‑1 (MQ=60)
ACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAAT > SRR4302537.92074/1‑94 (MQ=60)
ACCGGTAGCTGGCGCGCCGCAAGTGCTGGGGGTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGGTTGAAGAAGTTCTGCATATTTCTGATAAT > SRR4302537.5922689/1‑94 (MQ=60)
CCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATG < SRR4302537.411830/94‑1 (MQ=60)
CCGGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATG > SRR4302537.5699558/1‑94 (MQ=60)
GGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTG < SRR4302537.6181646/94‑1 (MQ=60)
GGTAGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTG < SRR4302537.6181644/94‑1 (MQ=60)
AGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAG > SRR4302537.3107634/1‑94 (MQ=60)
AGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAG > SRR4302537.3140012/1‑94 (MQ=60)
AGCTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAG < SRR4302537.970800/94‑1 (MQ=60)
CTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAA > SRR4302537.2706738/1‑94 (MQ=60)
CTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAA < SRR4302537.1742086/94‑1 (MQ=60)
CTGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAA > SRR4302537.3449750/1‑94 (MQ=60)
TGGCGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAA > SRR4302537.5475369/1‑94 (MQ=60)
CGCGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAA < SRR4302537.4454696/94‑1 (MQ=60)
CGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACT < SRR4302537.4871930/94‑1 (MQ=60)
CGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACT < SRR4302537.3328799/94‑1 (MQ=60)
CGCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACT < SRR4302537.2352533/94‑1 (MQ=60)
GCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTG < SRR4302537.5957985/94‑1 (MQ=60)
GCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTG < SRR4302537.2245438/94‑1 (MQ=60)
GCCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTG > SRR4302537.2086802/1‑94 (MQ=60)
CCGCAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTGC > SRR4302537.494776/1‑94 (MQ=60)
CAAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTGCCGG < SRR4302537.5237134/94‑1 (MQ=60)
AAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTGCCGGA < SRR4302537.5367053/94‑1 (MQ=60)
AAGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTGCCGGA < SRR4302537.4540581/94‑1 (MQ=60)
AGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTGCCGGAA > SRR4302537.515870/1‑94 (MQ=60)
AGTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTATGCATATTTCTGATAATGTGAAGAAAAAACTGCCGGAA < SRR4302537.4262692/94‑1 (MQ=60)
GTGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTGCCGGAAG < SRR4302537.5409727/94‑1 (MQ=60)
GTGCTGGGGTTTTTCTCGTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTGCCGGAAG < SRR4302537.6344790/94‑1 (MQ=60)
TGCTGGGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTGCCGGAAGG < SRR4302537.5466511/94‑1 (MQ=60)
GGGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTGCCGGAAGGCGTGA > SRR4302537.4113362/1‑94 (MQ=60)
|
TTTTAGCGTTTAGCGCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGAGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTGCCGGAAGGCGTGA > NC_000913/4041033‑4041218
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
