Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,076,271 |
C→T |
intergenic (+253/‑573) |
yiiD → / → yiiE |
putative acetyltransferase/hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,076,271 | 0 | C | T | 97.0%
| 693.7
/ 5.0
| 197 | intergenic (+253/‑573) | yiiD/yiiE | putative acetyltransferase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (3/3); new base T (82/109); total (85/112) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.19e-01 |
Only 100 of 197 total aligned reads displayed.
GAACTGAGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTC > NC_000913/4076181‑4076358
|
gAACTGAGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCa < 2:731778/93‑1 (MQ=255)
gAACTGAGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCa < 1:5514329/93‑1 (MQ=255)
cTGAGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATAc > 1:66286/1‑93 (MQ=255)
cTGAGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATAc < 1:5351953/93‑1 (MQ=255)
gAGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACtt > 1:5542022/1‑93 (MQ=255)
aGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACttt < 1:157185/93‑1 (MQ=255)
aGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACttt < 1:446382/93‑1 (MQ=255)
aGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACttt < 1:427757/93‑1 (MQ=255)
gTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACtttt < 1:1426287/93‑1 (MQ=255)
gTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACtttt > 1:3233626/1‑93 (MQ=255)
tGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTtc > 1:1098172/1‑93 (MQ=255)
tGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTtc < 2:6305919/93‑1 (MQ=255)
tGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTtc < 1:2032095/93‑1 (MQ=255)
tGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTtc < 2:6134065/93‑1 (MQ=255)
tGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTAATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTtc > 1:4846273/1‑93 (MQ=255)
gtgCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTtc < 2:2619245/91‑1 (MQ=255)
ggCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTtct < 1:2938071/93‑1 (MQ=255)
gCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTtctc > 1:5988440/1‑93 (MQ=255)
cAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCa > 2:1740423/1‑93 (MQ=255)
aTTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATa < 2:1174014/93‑1 (MQ=255)
aTTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATa > 2:2867958/1‑93 (MQ=255)
aTTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATa < 1:5879999/93‑1 (MQ=255)
aTTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATa < 1:5319540/93‑1 (MQ=255)
ttATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATaa > 2:1930480/1‑93 (MQ=255)
aTCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAat < 2:4465071/93‑1 (MQ=255)
tCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAATCCCCCTCTGGTGTCATACTTTTCTCATAAata < 1:6221447/93‑1 (MQ=255)
tCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAata < 2:4488980/93‑1 (MQ=255)
tCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAata > 1:4221235/1‑93 (MQ=255)
cGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAatat < 2:6234211/93‑1 (MQ=255)
gCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAATCCCCCTCTGGTGTCATACTTTTCTCATAAATAtt < 2:2686618/93‑1 (MQ=255)
gATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATAttttt < 1:5559438/93‑1 (MQ=255)
tAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTaa < 1:2997486/93‑1 (MQ=255)
tAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTaa < 1:6324737/93‑1 (MQ=255)
aaTGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTaaa < 2:4935682/93‑1 (MQ=255)
tGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAAt < 2:4721089/93‑1 (MQ=255)
gCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATc < 2:3440691/93‑1 (MQ=255)
cTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCt > 2:319609/1‑93 (MQ=255)
tAATTCATCATCTTAGTTCATGTTTGAGCTATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCtat < 1:5411878/93‑1 (MQ=255)
aaTTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCtata < 1:4656783/93‑1 (MQ=255)
aaTTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCtata < 2:431519/93‑1 (MQ=255)
aaTTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCtata < 2:4124438/93‑1 (MQ=255)
aaTTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCtata < 1:5293519/93‑1 (MQ=255)
aTTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAg < 2:5879910/93‑1 (MQ=255)
ttCATCATCTTAGTGCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGc > 1:2697019/1‑93 (MQ=255)
tcatcaTCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCt > 1:6395291/1‑93 (MQ=255)
atcatcTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTaa > 2:3657442/1‑93 (MQ=255)
atcatcTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTaa < 2:900598/93‑1 (MQ=255)
tcatcTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAAc < 2:5835922/93‑1 (MQ=255)
tcatcTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAAc < 2:5170410/93‑1 (MQ=255)
catcTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACa > 2:1699335/1‑93 (MQ=255)
tcTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACaaa < 2:2829924/93‑1 (MQ=255)
ttAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAata > 1:1635488/1‑93 (MQ=255)
ttAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAata < 1:2137524/93‑1 (MQ=255)
tAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAatat < 1:33619/93‑1 (MQ=255)
gTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAAtatta < 1:6292532/93‑1 (MQ=255)
gTTCATGTGTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAAtatta < 2:2591951/93‑1 (MQ=255)
tCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATg < 2:2014052/93‑1 (MQ=255)
cATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGc > 2:4556423/1‑93 (MQ=255)
aTGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCa > 2:4642848/1‑93 (MQ=255)
aTGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGGGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCa > 2:90502/1‑93 (MQ=255)
tGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCaa > 2:1640381/1‑93 (MQ=255)
tGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCaa > 2:5135297/1‑93 (MQ=255)
gTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCaaa < 2:3176061/93‑1 (MQ=255)
gTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCaaa < 1:6308057/93‑1 (MQ=255)
gTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCaaa < 2:800220/93‑1 (MQ=255)
gAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATa < 2:251341/93‑1 (MQ=255)
gAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATa < 1:1153105/93‑1 (MQ=255)
gAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATa < 1:4042862/93‑1 (MQ=255)
aGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATaa < 1:6054522/93‑1 (MQ=255)
gCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAAt < 2:5702082/93‑1 (MQ=255)
gCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAAt > 2:103811/1‑93 (MQ=255)
cGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATg < 2:1434192/93‑1 (MQ=255)
cGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATg < 2:217613/93‑1 (MQ=255)
aTTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGa > 2:6197529/1‑93 (MQ=255)
tttttGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGAc > 1:5742357/1‑93 (MQ=255)
tttGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTa < 1:4294019/93‑1 (MQ=255)
tttGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTa < 1:922558/93‑1 (MQ=255)
gATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGca < 2:2291219/93‑1 (MQ=255)
gATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGca < 2:3270352/93‑1 (MQ=255)
aTAGTCAAAACCCCCTCTGGTGTCATGCTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGcat < 1:3062292/93‑1 (MQ=255)
aTAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGcat < 1:3532075/93‑1 (MQ=255)
tAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGcatc > 1:1017524/1‑93 (MQ=255)
tAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGcatc > 1:3746602/1‑93 (MQ=255)
cAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTg > 2:3455528/1‑93 (MQ=255)
aaaaCCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGt > 2:5318226/1‑93 (MQ=255)
aaaCCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTc > 2:4904836/1‑93 (MQ=255)
aaaCCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTc > 1:3420052/1‑93 (MQ=255)
aaaCCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTc > 2:398456/1‑93 (MQ=255)
aaCCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCa > 2:129922/1‑93 (MQ=255)
aaCCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCa > 2:3062106/1‑93 (MQ=255)
aCCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAg > 1:1872140/1‑93 (MQ=255)
aCCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAg < 2:689794/93‑1 (MQ=255)
cccccTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGt > 1:1381356/1‑93 (MQ=255)
ccccTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTa > 2:4673634/1‑93 (MQ=255)
ccccTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTa < 1:5077775/93‑1 (MQ=255)
cccTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTAt < 2:4872220/93‑1 (MQ=255)
ctctGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTAtca < 2:4191555/93‑1 (MQ=255)
ctctGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTAtca > 2:4408344/1‑93 (MQ=255)
ctctGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTAtca > 2:6348298/1‑93 (MQ=255)
tctGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTAtcat > 2:3813798/1‑93 (MQ=255)
|
GAACTGAGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTC > NC_000913/4076181‑4076358
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTAGAACTGAGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTAC > NC_000913/4076178‑4076364
|
GTAGAACTGAGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGT < SRR4302537.947590/94‑1 (MQ=60)
GTAGAACTGAGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACACCCTCTGGTGT > SRR4302537.2293152/1‑94 (MQ=60)
TAGAACTGAGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTC < SRR4302537.92677/94‑1 (MQ=60)
GAACTGAGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCAT < SRR4302537.6053973/94‑1 (MQ=60)
GAACTGAGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCAT < SRR4302537.5551983/94‑1 (MQ=60)
AACTGAGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATA > SRR4302537.1126572/1‑94 (MQ=60)
AACTGAGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATA < SRR4302537.6341955/94‑1 (MQ=60)
ACTGAGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATAC > SRR4302537.66775/1‑94 (MQ=60)
ACTGAGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATAC > SRR4302537.6456030/1‑94 (MQ=60)
CTGAGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACT < SRR4302537.5388612/94‑1 (MQ=60)
TGAGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTT > SRR4302537.5579863/1‑94 (MQ=60)
AGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTT < SRR4302537.158304/94‑1 (MQ=60)
AGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTT < SRR4302537.449478/94‑1 (MQ=60)
AGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTT < SRR4302537.430735/94‑1 (MQ=60)
AGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTT > SRR4302537.3256415/1‑94 (MQ=60)
GTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTC > SRR4302537.1105760/1‑94 (MQ=60)
GTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTC < SRR4302537.1436218/94‑1 (MQ=60)
GTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTAATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTC > SRR4302537.4879718/1‑94 (MQ=60)
TGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCT < SRR4302537.2046258/94‑1 (MQ=60)
GGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTC < SRR4302537.2958698/94‑1 (MQ=60)
GGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTC > SRR4302537.6029566/1‑94 (MQ=60)
AATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATA > SRR4302537.6278185/1‑94 (MQ=60)
ATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAA < SRR4302537.5356055/94‑1 (MQ=60)
ATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAA < SRR4302537.5920341/94‑1 (MQ=60)
ATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAA < SRR4302537.3032806/94‑1 (MQ=60)
ATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATA > SRR4302537.4250643/1‑94 (MQ=60)
TCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAATCCCCCTCTGGTGTCATACTTTTCTCATAAATAT < SRR4302537.6264274/94‑1 (MQ=60)
CGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATT > SRR4302537.993850/1‑94 (MQ=60)
GATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTA < SRR4302537.5597427/94‑1 (MQ=60)
TAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAA < SRR4302537.3018383/94‑1 (MQ=60)
TAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAA > SRR4302537.5533790/1‑94 (MQ=60)
TAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAA < SRR4302537.6368003/94‑1 (MQ=60)
AATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAA < SRR4302537.4888136/94‑1 (MQ=60)
ATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAAT > SRR4302537.6356245/1‑94 (MQ=60)
ATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAAT < SRR4302537.6435634/94‑1 (MQ=60)
GCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCT < SRR4302537.3000268/94‑1 (MQ=60)
TAATTCATCATCTTAGTTCATGTTTGAGCTATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATA < SRR4302537.5448781/94‑1 (MQ=60)
AATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAG < SRR4302537.5329893/94‑1 (MQ=60)
AATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAG < SRR4302537.4688976/94‑1 (MQ=60)
ATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGC > SRR4302537.5257057/1‑94 (MQ=60)
ATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGC > SRR4302537.3709847/1‑94 (MQ=60)
ATTCATCATCTTAGTGCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGC > SRR4302537.2715860/1‑94 (MQ=60)
TTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCT > SRR4302537.6438845/1‑94 (MQ=60)
TTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCT > SRR4302537.4647983/1‑94 (MQ=60)
TCATCTTAGTTCTTGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACA < SRR4302537.6198114/94‑1 (MQ=60)
TCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACA > SRR4302537.3293609/1‑94 (MQ=60)
TCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACA < SRR4302537.4345236/94‑1 (MQ=60)
CATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAA > SRR4302537.3407537/1‑94 (MQ=60)
ATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAA > SRR4302537.5444928/1‑94 (MQ=60)
CTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATA > SRR4302537.5562813/1‑94 (MQ=60)
CTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATA > SRR4302537.1646942/1‑94 (MQ=60)
TTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATAT < SRR4302537.2152571/94‑1 (MQ=60)
TAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATT < SRR4302537.33886/94‑1 (MQ=60)
AGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTA > SRR4302537.2956883/1‑94 (MQ=60)
GTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTAT < SRR4302537.6335648/94‑1 (MQ=60)
TTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATG < SRR4302537.4318289/94‑1 (MQ=60)
CATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCA > SRR4302537.3549465/1‑94 (MQ=60)
ATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAA < SRR4302537.5586310/94‑1 (MQ=60)
ATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAA < SRR4302537.1457439/94‑1 (MQ=60)
GTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAG < SRR4302537.6351251/94‑1 (MQ=60)
GTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAG < SRR4302537.2079513/94‑1 (MQ=60)
TTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGAT < SRR4302537.1401912/94‑1 (MQ=60)
GAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAA < SRR4302537.4071134/94‑1 (MQ=60)
GAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAA < SRR4302537.1161129/94‑1 (MQ=60)
AGCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAAT < SRR4302537.6096111/94‑1 (MQ=60)
GCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATG < SRR4302537.485532/94‑1 (MQ=60)
GCGATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATG > SRR4302537.5383265/1‑94 (MQ=60)
GATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGA > SRR4302537.4278534/1‑94 (MQ=60)
ATTTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGAC > SRR4302537.5781674/1‑94 (MQ=60)
TTTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTA > SRR4302537.1742175/1‑94 (MQ=60)
TTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAG < SRR4302537.4323873/94‑1 (MQ=60)
TTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAG < SRR4302537.928926/94‑1 (MQ=60)
TTTGATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAG < SRR4302537.2489114/94‑1 (MQ=60)
ATAGTCAAAACCCCCTCTGGTGTCATGCTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATC < SRR4302537.3083630/94‑1 (MQ=60)
ATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATC > SRR4302537.3772918/1‑94 (MQ=60)
ATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATC < SRR4302537.3557037/94‑1 (MQ=60)
ATAGTCAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATC > SRR4302537.1024529/1‑94 (MQ=60)
CAAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGT > SRR4302537.1588528/1‑94 (MQ=60)
AAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTC > SRR4302537.2014026/1‑94 (MQ=60)
AAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTC < SRR4302537.5890120/94‑1 (MQ=60)
AAAACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTC > SRR4302537.3444260/1‑94 (MQ=60)
AACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAG > SRR4302537.1885169/1‑94 (MQ=60)
ACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGT > SRR4302537.1390994/1‑94 (MQ=60)
ACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGT < SRR4302537.4210923/94‑1 (MQ=60)
ACCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGT > SRR4302537.6026613/1‑94 (MQ=60)
CCCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTA > SRR4302537.3111104/1‑94 (MQ=60)
CCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTAT < SRR4302537.3786226/94‑1 (MQ=60)
CCCCTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTAT < SRR4302537.5112730/94‑1 (MQ=60)
CTCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCAT > SRR4302537.835827/1‑94 (MQ=60)
TCTGGTGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATT < SRR4302537.122343/94‑1 (MQ=60)
TGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCA < SRR4302537.5333157/94‑1 (MQ=60)
TGTCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTT < SRR4302537.6050665/94‑1 (MQ=60)
TCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTAC > SRR4302537.6440326/1‑94 (MQ=60)
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GTAGAACTGAGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTAC > NC_000913/4076178‑4076364
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
