Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,186,032 |
A→G |
V1035V (GTA→GTG) |
rpoC → |
RNA polymerase beta prime subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,186,032 | 0 | A | G | 96.0%
| 708.8
/ 14.1
| 223 | V1035V (GTA→GTG) | rpoC | RNA polymerase beta prime subunit |
| Reads supporting (aligned to +/- strand): ref base A (3/6); new base G (108/106); total (111/112) |
| Fisher's exact test for biased strand distribution p-value = 4.99e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.98e-01 |
Only 100 of 227 total aligned reads displayed.
GCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGC > NC_000913/4185944‑4186121
|
cGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCtt < 2:897893/93‑1 (MQ=255)
cGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCtt < 1:2710528/93‑1 (MQ=255)
gATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCttt < 1:3322068/93‑1 (MQ=255)
tGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTAc > 1:1714850/1‑93 (MQ=255)
tGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTAc < 1:3932496/93‑1 (MQ=255)
tGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGATTTAc > 2:389447/1‑93 (MQ=255)
ggCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACt < 2:3326995/93‑1 (MQ=255)
ggCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACt < 2:563290/93‑1 (MQ=255)
gCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTg > 1:4707616/1‑93 (MQ=255)
cGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGa < 2:3726624/93‑1 (MQ=255)
aCAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACAt < 2:4727081/93‑1 (MQ=255)
aCAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACAt < 2:1100346/93‑1 (MQ=255)
cAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATg < 2:44574/93‑1 (MQ=255)
cAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATg < 2:4449186/93‑1 (MQ=255)
cAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATg < 2:2232999/93‑1 (MQ=255)
aGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGCTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGa < 1:3451273/93‑1 (MQ=255)
ggTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGAt < 1:640336/93‑1 (MQ=255)
ggTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGAt < 1:5436911/93‑1 (MQ=255)
ggTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGAt > 2:4611227/1‑93 (MQ=255)
gTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATc < 2:2538483/93‑1 (MQ=255)
gTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATc > 1:5828794/1‑93 (MQ=255)
tGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGa > 2:1219801/1‑93 (MQ=255)
cTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACg > 1:3845734/1‑93 (MQ=255)
tGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACgg > 1:2469566/1‑93 (MQ=255)
tGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTGCTGACATGATCGACgg < 1:2504685/93‑1 (MQ=255)
ggcggcGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGc > 2:5317649/1‑93 (MQ=255)
gcggcgAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGcc > 1:3084805/1‑93 (MQ=255)
cggcgAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCa < 1:6086540/93‑1 (MQ=255)
gcgAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAgc > 1:668316/1‑92 (MQ=255)
gcgAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGa < 2:3646386/93‑1 (MQ=255)
cgAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGAc > 2:2314677/1‑93 (MQ=255)
cgAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGAc < 2:3119847/93‑1 (MQ=255)
cgAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGAAAGCGGTTTTGTGGGCTTTACTGACATGATCGACGGCCAGAc > 1:476579/1‑93 (MQ=255)
aaaCCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGCTTTTGTGCGCTTTTCTGACATGATCGACGGCCAGACCa < 2:1284561/93‑1 (MQ=255)
aaCCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCAt > 2:5084831/1‑93 (MQ=255)
aaCCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCAt < 1:135809/93‑1 (MQ=255)
aCCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGCGCAGACCAtt > 2:5178064/1‑93 (MQ=255)
ccGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTa < 2:4384301/93‑1 (MQ=255)
ccGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTa > 2:4759556/1‑93 (MQ=255)
ccGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTa < 1:1493723/93‑1 (MQ=255)
cGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTAc < 1:1593239/93‑1 (MQ=255)
cGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTAc < 2:317213/93‑1 (MQ=255)
gTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCCGACCATTAcg > 2:5099603/1‑93 (MQ=255)
gTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTAcg > 2:746059/1‑93 (MQ=255)
gTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTAcg > 1:2597622/1‑93 (MQ=255)
ttGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTAcgc > 1:975005/1‑93 (MQ=255)
aaaCTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCa > 2:1446362/1‑93 (MQ=255)
aaaCTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCa < 1:5383575/93‑1 (MQ=255)
aaCTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAg > 2:1762527/1‑93 (MQ=255)
aCTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGa > 1:1996214/1‑93 (MQ=255)
ggACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACcga < 1:4363305/93‑1 (MQ=255)
gACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACcgac < 1:4512324/93‑1 (MQ=255)
gACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACcgac < 1:4607229/93‑1 (MQ=255)
acacCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGa > 2:3515661/1‑93 (MQ=255)
cacCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGAc < 2:3806605/93‑1 (MQ=255)
cacCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGAc < 2:2077415/93‑1 (MQ=255)
acCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGAcc > 2:6064064/1‑93 (MQ=255)
ccATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCg > 1:2923915/1‑93 (MQ=255)
cATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCgg < 2:5720021/93‑1 (MQ=255)
cATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCgg < 1:3256690/93‑1 (MQ=255)
cATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCgg > 1:10335/1‑93 (MQ=255)
cATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCgg > 2:5822635/1‑93 (MQ=255)
tGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGgtc < 1:3343461/93‑1 (MQ=255)
tGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGgtc > 2:6214674/1‑93 (MQ=255)
ggTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGgtctgtc < 2:186279/93‑1 (MQ=255)
ggTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGgtctgtc > 1:4226123/1‑93 (MQ=255)
ggTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGgtctgtc < 2:3669458/93‑1 (MQ=255)
ggTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGgtctgtc > 1:5711570/1‑93 (MQ=255)
gTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGgtctgtct > 2:3439257/1‑93 (MQ=255)
ttATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCtt > 2:715628/1‑93 (MQ=255)
tATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTc < 2:4528699/93‑1 (MQ=255)
tCACCGAAGGAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCCTTACGCGTCAGACCGACGAACTGAGCGGTGTGTCTTCGc > 2:6200990/1‑93 (MQ=255)
cACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCt > 2:2167005/1‑93 (MQ=255)
cACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCt < 1:1098461/93‑1 (MQ=255)
aCCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCtg < 1:4864451/93‑1 (MQ=255)
ccGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGTCCGACGAACTGACCGGTCTGTCTTCGCtgg < 1:5570452/93‑1 (MQ=255)
cGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCtggt < 1:1782630/93‑1 (MQ=255)
cGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCtggt > 2:6091203/1‑93 (MQ=255)
cGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGACCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCtggt < 2:5227126/93‑1 (MQ=255)
gAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCtggtg > 2:4121992/1‑93 (MQ=255)
aaGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCtggtgg < 1:3802520/93‑1 (MQ=255)
aaGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCtggtgg > 1:5211233/1‑93 (MQ=255)
aGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTCGCTTCGCtgggggc > 2:1562314/1‑92 (MQ=255)
tAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAGCTGACCGGTCTGTCTTCGCTGGTGGTTc < 1:4671342/93‑1 (MQ=255)
tAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTc < 2:4263834/93‑1 (MQ=255)
tAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTc > 1:1261868/1‑93 (MQ=255)
gCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTgg > 1:5052111/1‑93 (MQ=255)
ggTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGAt > 2:5392813/1‑93 (MQ=255)
gTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGAtt > 1:2223481/1‑93 (MQ=255)
ttttGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTc > 1:12932/1‑93 (MQ=255)
ttttGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTc > 2:3757/1‑93 (MQ=255)
ttttGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTc > 2:3308858/1‑93 (MQ=255)
ttttGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTc < 1:3048571/93‑1 (MQ=255)
ttttGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTc > 2:1636547/1‑93 (MQ=255)
ttttGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTc > 1:6193684/1‑93 (MQ=255)
tttGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGAtttc > 2:4990060/1‑91 (MQ=255)
tttGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTcc > 2:513281/1‑93 (MQ=255)
tttGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTcc < 1:5146849/93‑1 (MQ=255)
ttGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGGTCTGGATTCCg > 1:5020185/1‑93 (MQ=255)
tgtgCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGc < 1:153167/93‑1 (MQ=255)
|
GCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGC > NC_000913/4185944‑4186121
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAA > NC_000913/4185939‑4186125
|
GAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTG < SRR4302537.5944721/94‑1 (MQ=60)
GAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTG < SRR4302537.3176933/94‑1 (MQ=60)
AAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGC < SRR4302537.5661040/94‑1 (MQ=60)
AAGGCGATTGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCG < SRR4302537.4709017/94‑1 (MQ=60)
CGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTT < SRR4302537.2729460/94‑1 (MQ=60)
GATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTA > SRR4302537.6000956/1‑94 (MQ=60)
GATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTA < SRR4302537.3345566/94‑1 (MQ=60)
ATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTAC > SRR4302537.1726825/1‑94 (MQ=60)
TGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACT < SRR4302537.1241387/94‑1 (MQ=60)
TGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACT < SRR4302537.3959974/94‑1 (MQ=60)
TGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACT < SRR4302537.5322588/94‑1 (MQ=60)
TGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACT > SRR4302537.317844/1‑94 (MQ=60)
GGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTG > SRR4302537.4740186/1‑94 (MQ=60)
GCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGA < SRR4302537.5094813/94‑1 (MQ=60)
CGAACAGGTTGATGGCGGCGAAACCGTTGCAAACTGCGACCCGCACACCATGACGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGAC > SRR4302537.1415137/1‑94 (MQ=60)
GAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACA < SRR4302537.3735028/94‑1 (MQ=60)
ACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATG < SRR4302537.4904072/94‑1 (MQ=60)
CAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGA > SRR4302537.329566/1‑94 (MQ=60)
AGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGAT > SRR4302537.1328377/1‑94 (MQ=60)
AGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGAT < SRR4302537.2700132/94‑1 (MQ=60)
AGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGCTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGAT < SRR4302537.3475681/94‑1 (MQ=60)
GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATC > SRR4302537.464293/1‑94 (MQ=60)
GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATC < SRR4302537.644699/94‑1 (MQ=60)
GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATC < SRR4302537.5473998/94‑1 (MQ=60)
GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATC > SRR4302537.5868744/1‑94 (MQ=60)
GTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCG < SRR4302537.302318/94‑1 (MQ=60)
GTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCG > SRR4302537.5437232/1‑94 (MQ=60)
GTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCG < SRR4302537.1400853/94‑1 (MQ=60)
TTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGA < SRR4302537.4832020/94‑1 (MQ=60)
TTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGA < SRR4302537.5014584/94‑1 (MQ=60)
GCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACG > SRR4302537.3872659/1‑94 (MQ=60)
CTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGG > SRR4302537.4677591/1‑94 (MQ=60)
CTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGG < SRR4302537.1534295/94‑1 (MQ=60)
CTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGG > SRR4302537.2486928/1‑94 (MQ=60)
TGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTGCTGACATGATCGACGGC < SRR4302537.2522305/94‑1 (MQ=60)
GGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCC > SRR4302537.3106297/1‑94 (MQ=60)
CGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAG < SRR4302537.6128352/94‑1 (MQ=60)
CGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAG < SRR4302537.915920/94‑1 (MQ=60)
GGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGC > SRR4302537.672885/1‑94 (MQ=60)
GCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGAC < SRR4302537.3947705/94‑1 (MQ=60)
GCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGAAAGCGGTTTTGTGGGCTTTACTGACATGATCGACGGCCAGAC > SRR4302537.479835/1‑94 (MQ=60)
CGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACC > SRR4302537.5079645/1‑94 (MQ=60)
CGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACC < SRR4302537.2713249/94‑1 (MQ=60)
AAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCAT < SRR4302537.1763611/94‑1 (MQ=60)
AACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATT > SRR4302537.4626980/1‑94 (MQ=60)
AACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATT < SRR4302537.136779/94‑1 (MQ=60)
CCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTAC < SRR4302537.1504127/94‑1 (MQ=60)
CGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACG < SRR4302537.1604373/94‑1 (MQ=60)
CGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACG > SRR4302537.2498182/1‑94 (MQ=60)
CGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACG > SRR4302537.2615792/1‑94 (MQ=60)
GTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGC > SRR4302537.981729/1‑94 (MQ=60)
TTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCG < SRR4302537.3866696/94‑1 (MQ=60)
GCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTC < SRR4302537.5222423/94‑1 (MQ=60)
CAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCA < SRR4302537.3073960/94‑1 (MQ=60)
AAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAG < SRR4302537.5420382/94‑1 (MQ=60)
AAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAG < SRR4302537.3751611/94‑1 (MQ=60)
AACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGA < SRR4302537.4755800/94‑1 (MQ=60)
AACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGA > SRR4302537.5658295/1‑94 (MQ=60)
AACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGA > SRR4302537.2010091/1‑94 (MQ=60)
ACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGAC > SRR4302537.4725871/1‑94 (MQ=60)
TGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCG < SRR4302537.1557671/94‑1 (MQ=60)
GGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGAC < SRR4302537.4393484/94‑1 (MQ=60)
GACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACG < SRR4302537.4639133/94‑1 (MQ=60)
GACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACG < SRR4302537.4543527/94‑1 (MQ=60)
CCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAAC > SRR4302537.2836328/1‑94 (MQ=60)
GCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTG < SRR4302537.6130141/94‑1 (MQ=60)
GCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTG < SRR4302537.4487111/94‑1 (MQ=60)
CACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACC > SRR4302537.2050065/1‑94 (MQ=60)
CACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACC < SRR4302537.4161630/94‑1 (MQ=60)
ACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCG < SRR4302537.1276255/94‑1 (MQ=60)
ACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCG > SRR4302537.2944454/1‑94 (MQ=60)
CCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGG > SRR4302537.10411/1‑94 (MQ=60)
CATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGT > SRR4302537.1700612/1‑94 (MQ=60)
CATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGT < SRR4302537.2261084/94‑1 (MQ=60)
CATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGT < SRR4302537.3279654/94‑1 (MQ=60)
CATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGC > SRR4302537.3399820/1‑94 (MQ=60)
ATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTC < SRR4302537.5611354/94‑1 (MQ=60)
ATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTC > SRR4302537.135228/1‑94 (MQ=60)
ATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTC < SRR4302537.3359729/94‑1 (MQ=60)
ATGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGCC > SRR4302537.2544603/1‑94 (MQ=60)
TGCCGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCT < SRR4302537.3367130/94‑1 (MQ=60)
TGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCT < SRR4302537.5796508/94‑1 (MQ=60)
CGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTC > SRR4302537.4255557/1‑94 (MQ=60)
CGGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTC > SRR4302537.5750661/1‑94 (MQ=60)
GGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCT < SRR4302537.1075786/94‑1 (MQ=60)
GGTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCT > SRR4302537.188227/1‑94 (MQ=60)
GTTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTT > SRR4302537.5285724/1‑94 (MQ=60)
TTATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTC < SRR4302537.2239847/94‑1 (MQ=60)
ATCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGC > SRR4302537.3146029/1‑94 (MQ=60)
TCACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCT < SRR4302537.6313221/94‑1 (MQ=60)
CACCGAAGTAAGCTGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTG < SRR4302537.1702055/94‑1 (MQ=60)
CACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTG < SRR4302537.1106052/94‑1 (MQ=60)
ACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGG < SRR4302537.5527734/94‑1 (MQ=60)
ACCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGG < SRR4302537.4898015/94‑1 (MQ=60)
CCGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGTCCGACGAACTGACCGGTCTGTCTTCGCTGGT < SRR4302537.5608527/94‑1 (MQ=60)
CGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTG < SRR4302537.646237/94‑1 (MQ=60)
CGAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTG < SRR4302537.1795055/94‑1 (MQ=60)
GAAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGG > SRR4302537.5247067/1‑94 (MQ=60)
AAGTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGT < SRR4302537.3829191/94‑1 (MQ=60)
GTAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTC > SRR4302537.1270643/1‑94 (MQ=60)
TAAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAGCTGACCGGTCTGTCTTCGCTGGTGGTTCT < SRR4302537.4703667/94‑1 (MQ=60)
AAGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTG > SRR4302537.6431559/1‑94 (MQ=60)
AGCGGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGG > SRR4302537.5086895/1‑94 (MQ=60)
GGTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATT > SRR4302537.2239145/1‑94 (MQ=60)
GGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATT > SRR4302537.4255408/1‑94 (MQ=60)
GTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTC > SRR4302537.6236363/1‑94 (MQ=60)
GTTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTC > SRR4302537.13026/1‑94 (MQ=60)
TTTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCC < SRR4302537.3069812/94‑1 (MQ=60)
TTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCG < SRR4302537.5182315/94‑1 (MQ=60)
TTTGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGGTCTGGATTCCG > SRR4302537.5054761/1‑94 (MQ=60)
TTGTGCGCTTTACTGACATGATCGACGGCCCGACCATTACGCGTCAGACCGACGAACTGACCGGCCTGTCTTCGCTGGTGGCTCTGGATTCCGC > SRR4302537.4323177/1‑94 (MQ=60)
TGTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCA < SRR4302537.154259/94‑1 (MQ=60)
GTGCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAG > SRR4302537.2253492/1‑94 (MQ=60)
GCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAA < SRR4302537.2253662/94‑1 (MQ=60)
GCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAA < SRR4302537.2331608/94‑1 (MQ=60)
GCGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAA < SRR4302537.1261941/94‑1 (MQ=60)
|
GAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAA > NC_000913/4185939‑4186125
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
