Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,613,024 |
C→T |
G30D (GGC→GAC) |
yjjW ← |
YjjW |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,613,024 | 0 | C | T | 95.9%
| 814.2
/ 11.9
| 244 | G30D (GGC→GAC) | yjjW | YjjW |
| Reads supporting (aligned to +/- strand): ref base C (6/4); new base T (91/141); total (99/145) |
| Fisher's exact test for biased strand distribution p-value = 2.05e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.85e-01 |
Only 100 of 255 total aligned reads displayed.
TGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTTCATG > NC_000913/4612934‑4613113
|
tGATGCGGACACTGTGGCACGCACTCCCCCCAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCGGccc > 2:2822320/1‑93 (MQ=255)
tGATGCGGACACAGTGGCACGCACCCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGtcc < 1:2374019/93‑1 (MQ=255)
gATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCt > 1:3065122/1‑93 (MQ=255)
gACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCaaaa > 1:2580772/1‑93 (MQ=255)
gACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCaaaa > 2:4793513/1‑93 (MQ=255)
acacTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCaaaaa > 1:5699275/1‑93 (MQ=255)
cacTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAAc > 1:3939867/1‑93 (MQ=255)
cacTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAAc > 2:5153863/1‑93 (MQ=255)
cacTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAAc < 1:6058280/93‑1 (MQ=255)
acTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACa > 1:1381483/1‑93 (MQ=255)
acTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACa < 1:4098643/93‑1 (MQ=255)
gtgGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACagag < 2:3423056/93‑1 (MQ=255)
tgGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGc < 2:1633217/93‑1 (MQ=255)
tgGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGc < 1:3989113/93‑1 (MQ=255)
gcacgcacTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCa < 2:3103340/93‑1 (MQ=255)
cacgcacTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAg > 2:2236839/1‑93 (MQ=255)
cgcacTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAgac < 1:4602882/93‑1 (MQ=255)
gcacTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGGCCTGCAAAAACAGAGCCAgacg > 1:6272283/1‑93 (MQ=255)
cacTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAgacga > 2:152129/1‑93 (MQ=255)
cacTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAgacga < 2:3876201/93‑1 (MQ=255)
cacTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAgacga < 2:4831378/93‑1 (MQ=255)
acTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAgacgac < 1:6167768/93‑1 (MQ=255)
acTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAgacgac < 1:5074588/93‑1 (MQ=255)
cccACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGcc < 1:4889848/93‑1 (MQ=255)
ccACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCt > 2:3802572/1‑93 (MQ=255)
ccACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCt < 1:5291023/93‑1 (MQ=255)
ccACAGTCATTGCAACGTCACATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCt > 1:3813912/1‑93 (MQ=255)
cacaGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTg > 1:1246049/1‑93 (MQ=255)
cacaGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTg < 2:5611427/93‑1 (MQ=255)
acaGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTgg > 2:823270/1‑93 (MQ=255)
tCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCg < 2:6249372/93‑1 (MQ=255)
tCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCg < 1:4155765/93‑1 (MQ=255)
aTTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGACAGACGACTGCCTGGCCCGTc > 1:2875035/1‑93 (MQ=255)
ttGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCa > 2:3693935/1‑93 (MQ=255)
ttGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCa > 2:1331/1‑93 (MQ=255)
tGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCaa < 2:1955058/93‑1 (MQ=255)
gCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAAc > 2:1187931/1‑93 (MQ=255)
gCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAAc < 1:6127856/93‑1 (MQ=255)
aCGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCa < 1:1886358/93‑1 (MQ=255)
cGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAg < 1:6353250/93‑1 (MQ=255)
cGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAg < 1:5381241/93‑1 (MQ=255)
cGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAg < 1:3586493/93‑1 (MQ=255)
gTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAgg > 2:6401499/1‑93 (MQ=255)
tCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGga > 1:1469723/1‑93 (MQ=255)
tCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGga < 2:1113143/93‑1 (MQ=255)
tCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGga < 2:5667506/93‑1 (MQ=255)
gcccATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGga < 1:3216867/92‑1 (MQ=255)
ccATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGgaga > 2:5221881/1‑93 (MQ=255)
cATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGaa < 2:440292/93‑1 (MQ=255)
cATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGaa < 2:2307013/93‑1 (MQ=255)
cATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGaa > 1:4379739/1‑93 (MQ=255)
cATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGaa < 1:218161/93‑1 (MQ=255)
tCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAgg > 1:5845089/1‑93 (MQ=255)
cGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAggg < 1:284115/93‑1 (MQ=255)
cGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAggg < 1:1180359/93‑1 (MQ=255)
cGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAggg < 1:4855101/93‑1 (MQ=255)
gTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAgggg < 2:4265849/93‑1 (MQ=255)
gTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAgggg > 2:106084/1‑93 (MQ=255)
gTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAgggg < 1:5728053/93‑1 (MQ=255)
tCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGa > 1:4484756/1‑93 (MQ=255)
cACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATa < 2:6131149/93‑1 (MQ=255)
cACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATa > 2:43460/1‑93 (MQ=255)
cACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATa > 1:1544951/1‑93 (MQ=255)
aCGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATaa < 2:4160236/93‑1 (MQ=255)
aCGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATaa < 2:2422939/93‑1 (MQ=255)
gtaTTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGCGAACGCAGGAGAAGGGGAGAATc > 2:3998462/3‑93 (MQ=255)
ggATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATc < 2:664724/93‑1 (MQ=255)
gATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCt > 1:812998/1‑93 (MQ=255)
aTTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCtt > 1:3161443/1‑93 (MQ=255)
aTTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCtt > 2:6048535/1‑93 (MQ=255)
ttGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTa > 1:4818233/1‑93 (MQ=255)
tgtgACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTAc < 2:4611731/93‑1 (MQ=255)
tgtgACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTAc < 2:5537760/93‑1 (MQ=255)
tgtgACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTAc < 1:1029219/93‑1 (MQ=255)
gtgACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACt > 2:1758985/1‑93 (MQ=255)
tgACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTg > 1:962356/1‑93 (MQ=255)
cAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACt > 2:1740123/1‑93 (MQ=255)
cAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACt < 1:231637/93‑1 (MQ=255)
gTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTaa < 2:246216/93‑1 (MQ=255)
tttttGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTaaa < 2:5903668/93‑1 (MQ=255)
tttttGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTaaa < 1:4444804/93‑1 (MQ=255)
ttttGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAg < 1:2095043/93‑1 (MQ=255)
ttGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAgcg < 1:1033784/93‑1 (MQ=255)
gCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCa > 2:465139/1‑93 (MQ=255)
aGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATc < 2:3304605/93‑1 (MQ=255)
aGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATc < 1:2609718/93‑1 (MQ=255)
aGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATc < 2:5346710/93‑1 (MQ=255)
aGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATc < 1:4998961/93‑1 (MQ=255)
aGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATc > 1:3286785/1‑93 (MQ=255)
gcAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATctgc > 1:369617/1‑93 (MQ=255)
gcAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGAATctgc < 2:3585008/93‑1 (MQ=255)
cAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATctgct < 1:6452002/93‑1 (MQ=255)
aGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGGGCATctgctt > 1:1616410/1‑92 (MQ=255)
aTTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGtt < 1:3362492/93‑1 (MQ=255)
aTTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGtt < 2:2718283/93‑1 (MQ=255)
ttGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTTc > 2:5055906/1‑93 (MQ=255)
tGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTTCa < 1:648677/93‑1 (MQ=255)
tGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTTCa < 2:1884913/93‑1 (MQ=255)
gCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTTCAt < 1:726922/93‑1 (MQ=255)
gCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTTCAt > 1:3625808/1‑93 (MQ=255)
|
TGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTTCATG > NC_000913/4612934‑4613113
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTTCATGG > NC_000913/4612932‑4613114
|
CCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTC > SRR4302537.4350235/1‑94 (MQ=60)
CCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTC > SRR4302537.3534463/1‑94 (MQ=60)
CTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCC > SRR4302537.4028072/1‑94 (MQ=60)
CTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCC > SRR4302537.4459976/1‑94 (MQ=60)
CTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCC < SRR4302537.3185479/94‑1 (MQ=60)
TGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCT < SRR4302537.6392621/94‑1 (MQ=60)
TGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCT > SRR4302537.3086475/1‑94 (MQ=60)
TGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCT > SRR4302537.5946311/1‑94 (MQ=60)
TGATGCGGACACAGTGGCACGCACCCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCT < SRR4302537.2390747/94‑1 (MQ=60)
CGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAA > SRR4302537.3523589/1‑94 (MQ=60)
CGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAA > SRR4302537.3470298/1‑94 (MQ=60)
GGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAA < SRR4302537.4632566/94‑1 (MQ=60)
GGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAA > SRR4302537.2598838/1‑94 (MQ=60)
GACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAA > SRR4302537.5738276/1‑94 (MQ=60)
GACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAA < SRR4302537.5406637/94‑1 (MQ=60)
ACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAAC > SRR4302537.3967411/1‑94 (MQ=60)
ACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAAC < SRR4302537.6192326/94‑1 (MQ=60)
ACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAAC < SRR4302537.4861719/94‑1 (MQ=60)
CACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACA < SRR4302537.420662/94‑1 (MQ=60)
CACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACA > SRR4302537.1391122/1‑94 (MQ=60)
CACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACA < SRR4302537.6099900/94‑1 (MQ=60)
ACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAG < SRR4302537.4953411/94‑1 (MQ=60)
ACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAG < SRR4302537.4127258/94‑1 (MQ=60)
TGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAG < SRR4302537.742166/94‑1 (MQ=60)
GTGGCCCACACTCCACACAGTCATTGCGACGTCCCATCGTCCGCGTATTGTGACAGTTTTTGCAGCGCAGATTGGAGTCCTGCAAAAACAGAGC < SRR4302537.772781/94‑1 (MQ=60)
GTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGC < SRR4302537.2423706/94‑1 (MQ=60)
TGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCC < SRR4302537.4017048/94‑1 (MQ=60)
GCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAG < SRR4302537.4508313/94‑1 (MQ=60)
GCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAG < SRR4302537.4931603/94‑1 (MQ=60)
ACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGAC < SRR4302537.2283000/94‑1 (MQ=60)
ACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGAC < SRR4302537.3310801/94‑1 (MQ=60)
ACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGAC < SRR4302537.6259332/94‑1 (MQ=60)
ACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGAC < SRR4302537.2460439/94‑1 (MQ=60)
CGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACG < SRR4302537.4634741/94‑1 (MQ=60)
CGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACG < SRR4302537.284814/94‑1 (MQ=60)
CGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGGCCTGCAAAAACAGAGCCAGACG > SRR4302537.6315326/1‑94 (MQ=60)
GCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGA > SRR4302537.3885992/1‑94 (MQ=60)
CACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGAC < SRR4302537.3217943/94‑1 (MQ=60)
ACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACT < SRR4302537.6210238/94‑1 (MQ=60)
ACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACT < SRR4302537.5109525/94‑1 (MQ=60)
ACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACT > SRR4302537.1333081/1‑94 (MQ=60)
CCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCT < SRR4302537.3241626/94‑1 (MQ=60)
CCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCT < SRR4302537.4923615/94‑1 (MQ=60)
CCCACAGTCATTGCAACGTCACATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCT > SRR4302537.3840657/1‑94 (MQ=60)
CCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTG > SRR4302537.1254730/1‑94 (MQ=60)
CCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTG < SRR4302537.367030/94‑1 (MQ=60)
CCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTG < SRR4302537.3642428/94‑1 (MQ=60)
CCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTG < SRR4302537.5327380/94‑1 (MQ=60)
CACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGG > SRR4302537.4903292/1‑94 (MQ=60)
TCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGT < SRR4302537.4184787/94‑1 (MQ=60)
CATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTC < SRR4302537.5095759/94‑1 (MQ=60)
CATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGACAGACGACTGCCTGGCCCGTC > SRR4302537.2895213/1‑94 (MQ=60)
ATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCA < SRR4302537.727652/94‑1 (MQ=60)
TGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAAC < SRR4302537.1306656/94‑1 (MQ=60)
TGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAAC < SRR4302537.2862540/94‑1 (MQ=60)
GCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACG < SRR4302537.6169972/94‑1 (MQ=60)
GCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACG < SRR4302537.2124405/94‑1 (MQ=60)
AACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCA > SRR4302537.3676056/1‑94 (MQ=60)
ACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTTCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAG < SRR4302537.4588429/94‑1 (MQ=60)
ACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAG < SRR4302537.1899477/94‑1 (MQ=60)
CGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGG < SRR4302537.6396622/94‑1 (MQ=60)
CGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGG < SRR4302537.5418039/94‑1 (MQ=60)
CGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGG > SRR4302537.1650744/1‑94 (MQ=60)
CGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGG < SRR4302537.2228335/94‑1 (MQ=60)
CGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGG < SRR4302537.2602234/94‑1 (MQ=60)
CGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGG < SRR4302537.3611777/94‑1 (MQ=60)
CGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGAAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGG < SRR4302537.6459553/94‑1 (MQ=60)
GTCCCATCGTCCGCGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGA > SRR4302537.4882860/1‑94 (MQ=60)
GTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGA < SRR4302537.1545142/94‑1 (MQ=60)
GTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGA > SRR4302537.1479944/1‑94 (MQ=60)
TCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAG < SRR4302537.877609/94‑1 (MQ=60)
GCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAG < SRR4302537.3239502/94‑1 (MQ=60)
CCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGA < SRR4302537.839275/94‑1 (MQ=60)
CCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCATCAACGCAGGAGA > SRR4302537.1196680/1‑94 (MQ=60)
CCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAA > SRR4302537.4409969/1‑94 (MQ=60)
CCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAA > SRR4302537.612118/1‑94 (MQ=60)
CATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAG < SRR4302537.445766/94‑1 (MQ=60)
CATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAG < SRR4302537.6380997/94‑1 (MQ=60)
CATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAG < SRR4302537.1508754/94‑1 (MQ=60)
CATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAG < SRR4302537.219716/94‑1 (MQ=60)
ATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGG > SRR4302537.5885169/1‑94 (MQ=60)
CGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGG < SRR4302537.1188572/94‑1 (MQ=60)
CGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGG < SRR4302537.3299765/94‑1 (MQ=60)
CGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGG < SRR4302537.3015268/94‑1 (MQ=60)
CGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGG < SRR4302537.286097/94‑1 (MQ=60)
CGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGG < SRR4302537.4888602/94‑1 (MQ=60)
CGTCCACGGATTGTGACAGTATTTGCATCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGG < SRR4302537.1070793/94‑1 (MQ=60)
GTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGA > SRR4302537.4515780/1‑94 (MQ=60)
GTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGA < SRR4302537.2643334/94‑1 (MQ=60)
GTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGA < SRR4302537.5767260/94‑1 (MQ=60)
TCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGAT < SRR4302537.675810/94‑1 (MQ=60)
CCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATA > SRR4302537.1555738/1‑94 (MQ=60)
CCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATA > SRR4302537.5985050/1‑94 (MQ=60)
CACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAA < SRR4302537.2019202/94‑1 (MQ=60)
ACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAAT < SRR4302537.1456826/94‑1 (MQ=60)
ACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAAT < SRR4302537.5763334/94‑1 (MQ=60)
CGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATT > SRR4302537.4807673/1‑94 (MQ=60)
CGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATC > SRR4302537.6496185/1‑94 (MQ=60)
GGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCT > SRR4302537.3919989/1‑94 (MQ=60)
GGATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCT > SRR4302537.818569/1‑94 (MQ=60)
GATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTT > SRR4302537.3183635/1‑94 (MQ=60)
GATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTT > SRR4302537.4101626/1‑94 (MQ=60)
ATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTA > SRR4302537.6500405/1‑94 (MQ=60)
ATTGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTA > SRR4302537.4851501/1‑94 (MQ=60)
TGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACT > SRR4302537.3158851/1‑94 (MQ=60)
TGTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACT < SRR4302537.1036305/94‑1 (MQ=60)
GTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTG > SRR4302537.968999/1‑94 (MQ=60)
GTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTG < SRR4302537.5429939/94‑1 (MQ=60)
GTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTG > SRR4302537.3072063/1‑94 (MQ=60)
GTGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTG > SRR4302537.3995939/1‑94 (MQ=60)
TGACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGA > SRR4302537.2336613/1‑94 (MQ=60)
GACAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGGGAAGGGGATAATCTTACTGAC > SRR4302537.2152587/1‑94 (MQ=60)
CAGTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTA < SRR4302537.233269/94‑1 (MQ=60)
GTTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAA > SRR4302537.5330786/1‑94 (MQ=60)
TTTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAG < SRR4302537.4475504/94‑1 (MQ=60)
TTTTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGC < SRR4302537.2109819/94‑1 (MQ=60)
TTTGCAGCGCAGAGTGGAGTCCGCCAAAAACAGAGCGAGACGACTGCATGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCG < SRR4302537.3215733/94‑1 (MQ=60)
TTGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGC < SRR4302537.1040907/94‑1 (MQ=60)
TGCAGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCA < SRR4302537.1039198/94‑1 (MQ=60)
CAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATC > SRR4302537.3310011/1‑94 (MQ=60)
AGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCT < SRR4302537.5033407/94‑1 (MQ=60)
AGCGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCT < SRR4302537.2627973/94‑1 (MQ=60)
CGCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGC > SRR4302537.372179/1‑94 (MQ=60)
CGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGC > SRR4302537.1105212/1‑94 (MQ=60)
GCAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCT < SRR4302537.5153831/94‑1 (MQ=60)
CAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGGGCATCTGCTT > SRR4302537.1627701/1‑94 (MQ=60)
CAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTG < SRR4302537.5759656/94‑1 (MQ=60)
CAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTG < SRR4302537.6495746/94‑1 (MQ=60)
CAGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTG > SRR4302537.6171758/1‑94 (MQ=60)
ATATTGCAGGCCTGCAAAAAAAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGT < SRR4302537.3799453/94‑1 (MQ=60)
AGATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGT > SRR4302537.4286381/1‑94 (MQ=60)
GATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTT > SRR4302537.1591654/1‑94 (MQ=60)
GATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTT > SRR4302537.5123871/1‑94 (MQ=60)
ATTGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTTC < SRR4302537.3386308/94‑1 (MQ=60)
TGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTTCAT > SRR4302537.3651367/1‑94 (MQ=60)
TGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTTCAT < SRR4302537.653100/94‑1 (MQ=60)
TGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTTCAT < SRR4302537.4130037/94‑1 (MQ=60)
TGCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTTCAT < SRR4302537.5831562/94‑1 (MQ=60)
GCAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTTCATG < SRR4302537.731885/94‑1 (MQ=60)
CAGTCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTTCATGG > SRR4302537.4608178/1‑94 (MQ=60)
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CCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTTCATGG > NC_000913/4612932‑4613114
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
